BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00041830
         (1628 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   625   e-176
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu...   570   e-160
ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prun...   563   e-157
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   559   e-156
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr...   557   e-156
ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prun...   556   e-155
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]           554   e-155
ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [...   537   e-150
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   536   e-149
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit...   512   e-142
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   508   e-141
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   505   e-140
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   502   e-139
ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Caps...   489   e-135
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian...   488   e-135
ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutr...   485   e-134
ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A...   485   e-134
ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mit...   483   e-134
ref|XP_002883182.1| pseudouridine synthase family protein [Arabi...   483   e-133
gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Mimulus...   471   e-130

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis vinifera]
            gi|296090438|emb|CBI40257.3| unnamed protein product
            [Vitis vinifera]
          Length = 476

 Score =  625 bits (1613), Expect = e-176
 Identities = 331/481 (68%), Positives = 384/481 (79%), Gaps = 8/481 (1%)
 Frame = -2

Query: 1582 LLRRAFLRSPICTAAAALKASRICISVVHEKRPHYTTASQSVXXXXXXXXXXXXKGKWFT 1403
            L RR FL+S   T          CIS + ++R  + T++ +V             GKWFT
Sbjct: 6    LRRRFFLQSRRETTGKV--GDMFCISALDQQRSCFATSNDAVSEAHKSKK-----GKWFT 58

Query: 1402 LPPFTSTVDASSLGKELSG-RCMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQKLFR 1226
            LP FT  VDASSLGK LSG R     GN  A   AS +ALKWVVRCCPQLPRSLVQKLFR
Sbjct: 59   LPAFTPVVDASSLGKVLSGHRTDLNTGNTTAG--ASTTALKWVVRCCPQLPRSLVQKLFR 116

Query: 1225 LRQVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQFPSQKHECHCN 1046
            LRQVRRES N  + SD   Q Q+ R+ RVAAK+LMNLGD+I LPITV++FPS+KHE HCN
Sbjct: 117  LRQVRRESYNMIT-SDIGVQNQEHRLKRVAAKDLMNLGDQILLPITVEEFPSEKHEYHCN 175

Query: 1045 EEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPPRLVHR 866
            +EE  F+ NLELYKD AIIVVNKPPGL VQGGIGI++SLDELAAT LRYD SEPPRLVHR
Sbjct: 176  DEEINFVHNLELYKDPAIIVVNKPPGLPVQGGIGIKRSLDELAATYLRYDCSEPPRLVHR 235

Query: 865  LDRDSSGILVMGRTQTSSTVLHSIFREKTFGA-NEDIGSKKRILERRYLALVIGSPARQR 689
            LDRDSSGIL+MGRTQTS+T+LHSIFREKTFGA N DI +KKRIL+RRY ALVIGSP R R
Sbjct: 236  LDRDSSGILIMGRTQTSATILHSIFREKTFGASNNDIDTKKRILQRRYWALVIGSPRRPR 295

Query: 688  GIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTWVELFPLTGRK 509
            G+ISAPLG++VVD+GKSERITI++N QTMSSQHAITEYRVI+SS HGYTW+EL PLTGRK
Sbjct: 296  GLISAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGRK 355

Query: 508  HQLRVHCAEVLGTPIVGDYKYGWQTHKKWKPL-PSNVDRN-----AKGKKNPFGLDLESG 347
            HQLRVHCAEVLGTPIVGDYKYGWQ H+KWK L  SN+++N     +  K +PFGLDLESG
Sbjct: 356  HQLRVHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESG 415

Query: 346  SICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQTSWDV 167
            SI +KQP+LHLHCKQM+LP+VSLAL+ +++S+  + DLSE++ LEFVAPLPSHMQ SWD+
Sbjct: 416  SILDKQPHLHLHCKQMVLPNVSLALQNLQLSA--ECDLSELESLEFVAPLPSHMQRSWDI 473

Query: 166  L 164
            L
Sbjct: 474  L 474


>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
            gi|550331407|gb|EEE87831.2| hypothetical protein
            POPTR_0009s09860g [Populus trichocarpa]
          Length = 471

 Score =  570 bits (1469), Expect = e-160
 Identities = 299/486 (61%), Positives = 370/486 (76%), Gaps = 7/486 (1%)
 Frame = -2

Query: 1597 MVDLYLLRRAFLRSPICTAAAALKASRICISVVHEKRPHYTTASQSVXXXXXXXXXXXXK 1418
            MV   LL R  L+     + ++L A++  IS V   +  YTT ++S             +
Sbjct: 3    MVYATLLGRVLLQPS--RSISSLHATKPSISTVRVLQSRYTTNTKS-----QNHYENDKR 55

Query: 1417 GKWFTLPPFTSTVDASSLGKELSGRCMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQ 1238
            GKWFTLPP+TST++ S LG  LS R         A   +  +ALKWV+RCCP+LPR+LVQ
Sbjct: 56   GKWFTLPPYTSTINGSVLGIALSARIP-------AKSASETTALKWVLRCCPELPRNLVQ 108

Query: 1237 KLFRLRQVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQFPSQKHE 1058
            KLFRLRQVRRESP   S + G  Q Q+ R+ RVAAK+ M++GDRIFLPI+V+  P++K +
Sbjct: 109  KLFRLRQVRRESPVMESCNLGD-QGQEHRLKRVAAKDSMDVGDRIFLPISVKVLPAEKQD 167

Query: 1057 CHCNEEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPPR 878
            CHCNEEE  FIR LELYKD+AIIVVNKPPG+ VQGGIGI++SLDEL+A+C   DYSEPPR
Sbjct: 168  CHCNEEEINFIRGLELYKDAAIIVVNKPPGMPVQGGIGIKRSLDELSASCFSSDYSEPPR 227

Query: 877  LVHRLDRDSSGILVMGRTQTSSTVLHSIFREKTFGA-NEDIGSKKRILERRYLALVIGSP 701
            LVHRLDRD SGILVMGRTQTS+TVLH+IFREKT  A N+D+G+K+RIL+R+Y ALVIGSP
Sbjct: 228  LVHRLDRDCSGILVMGRTQTSATVLHAIFREKTLAASNDDVGNKRRILQRKYWALVIGSP 287

Query: 700  ARQRGIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTWVELFPL 521
             R +G+ISAPLG++VVDNGKS+RIT++ NSQ +SSQHA+T+YRVIE SSHG+TW+EL PL
Sbjct: 288  RRPKGLISAPLGKVVVDNGKSDRITVVENSQNLSSQHAVTQYRVIE-SSHGFTWLELSPL 346

Query: 520  TGRKHQLRVHCAEVLGTPIVGDYKYGWQTHKKWKPLP-SNVDRNAKGKK-----NPFGLD 359
            TGRKHQLRVHCAEVLGTPIVGDYKY WQ H+ WK L  SN++ N+  K       PF LD
Sbjct: 347  TGRKHQLRVHCAEVLGTPIVGDYKYAWQAHRNWKQLQWSNIEDNSNDKSLSEKILPFALD 406

Query: 358  LESGSICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQT 179
            L+SGSI EK P LHLHCKQM+LPDVS AL+ V++SS  DYD S++  L+F APLP +M+ 
Sbjct: 407  LDSGSISEKHPRLHLHCKQMVLPDVSKALQDVQLSS--DYDFSQLASLKFDAPLPPYMKK 464

Query: 178  SWDVLK 161
            SWD+L+
Sbjct: 465  SWDILR 470


>ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
            gi|462395210|gb|EMJ01009.1| hypothetical protein
            PRUPE_ppa004969mg [Prunus persica]
          Length = 483

 Score =  563 bits (1450), Expect = e-157
 Identities = 301/496 (60%), Positives = 369/496 (74%), Gaps = 19/496 (3%)
 Frame = -2

Query: 1597 MVDLYLLRRAFLRSPICTAAAALKASRICISVVHEKRPHYTTASQSVXXXXXXXXXXXXK 1418
            M+   LLRR  LR P  + A      R+CIS  H  R + TT +                
Sbjct: 1    MMGPILLRRLLLRPPPSSTA------RLCISAFHNWRSYATTET-------FHEDREKRG 47

Query: 1417 GKWFTLPPFTSTVDASSLGKELS-----GRCMSGIGNKMANGYASISALKWVVRCCPQLP 1253
             KWFTLPPFT+T++ S+LGKELS     GR +       +    + +ALKWV RCCP+LP
Sbjct: 48   EKWFTLPPFTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELP 107

Query: 1252 RSLVQKLFRLRQVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQFP 1073
            RSLVQKLFRLRQVRRES +     +G  +  +R + RVAAK+ MN+GDRI LP++VQ+FP
Sbjct: 108  RSLVQKLFRLRQVRRESCDMECSGEG-VEALERPLKRVAAKDSMNVGDRIHLPLSVQEFP 166

Query: 1072 SQKHE-------CHCNEEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAA 914
            + K E       C+C+EEE  FIR+LELYKD AIIV+NKPPG+ VQGGIGI++SLDELAA
Sbjct: 167  NDKQELPNDKKECYCSEEEVTFIRSLELYKDPAIIVINKPPGMPVQGGIGIKRSLDELAA 226

Query: 913  TCLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSSTVLHSIFREKTFGA-NEDIGSKKRIL 737
             CL YD+SEPPRLVHRLDRDSSGILVMGRTQTS+TVLHSIFREKTFGA N++I   KRIL
Sbjct: 227  ACLSYDFSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGASNDEIDDAKRIL 286

Query: 736  ERRYLALVIGSPARQRGIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESS 557
            +RRY ALVIGSP +++G+ISAPLG++VVDNGKS+RITI+N+SQT+ SQHAIT+Y+VI S 
Sbjct: 287  QRRYWALVIGSPRQRKGLISAPLGKVVVDNGKSDRITIVNDSQTLPSQHAITKYKVIGSP 346

Query: 556  SHGYTWVELFPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHKKWKPLP-SNVDRNA--- 389
              GYTW+EL PLTGRKHQLRVHCAEVL TPIVGDYKYGWQTH+ WKPL  SN + ++   
Sbjct: 347  CPGYTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQTHRNWKPLAWSNNECHSDEE 406

Query: 388  --KGKKNPFGLDLESGSICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRL 215
              K K  PF L++ESGS+ EK P LHLHCKQM+LP+V+LAL+ V++ SD+  DLSE++ L
Sbjct: 407  FPKRKNLPFDLNMESGSVSEKNPRLHLHCKQMVLPNVNLALQNVKLHSDS--DLSELESL 464

Query: 214  EFVAPLPSHMQTSWDV 167
            E VA LPS MQ SW++
Sbjct: 465  ELVAALPSFMQRSWNI 480


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 536

 Score =  559 bits (1440), Expect = e-156
 Identities = 285/425 (67%), Positives = 339/425 (79%), Gaps = 7/425 (1%)
 Frame = -2

Query: 1417 GKWFTLPPFTSTVDASSLGKELSGRCMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQ 1238
            GK+FTLPP+TST+  S+LGK LS           A      +ALKWV+RCCP+LPR+LVQ
Sbjct: 126  GKFFTLPPYTSTISGSALGKALSATAT-------AKASTETTALKWVLRCCPELPRNLVQ 178

Query: 1237 KLFRLRQVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQFPSQKHE 1058
            KLFRLRQV+RE  N     DG   E + +  RVAAK+LMN+GDRIFLPI+VQ  P +K +
Sbjct: 179  KLFRLRQVKRELLNV---GDG---EMEHKTKRVAAKDLMNVGDRIFLPISVQALPFEKQK 232

Query: 1057 CHCNEEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPPR 878
            CHC E+E  FIR LELYKD AIIVVNKPPG+ VQGGIGI+ S DELAA+CL YDYSEPPR
Sbjct: 233  CHCGEKEANFIRGLELYKDEAIIVVNKPPGMPVQGGIGIKSSFDELAASCLSYDYSEPPR 292

Query: 877  LVHRLDRDSSGILVMGRTQTSSTVLHSIFREKTFGA-NEDIGSKKRILERRYLALVIGSP 701
            LVHRLDRDSSGILVMGRTQTS+ VLHS+FREKTF A N DIG ++RIL+R+Y ALVIGSP
Sbjct: 293  LVHRLDRDSSGILVMGRTQTSTMVLHSVFREKTFAASNHDIGERRRILQRKYWALVIGSP 352

Query: 700  ARQRGIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTWVELFPL 521
             RQ+GIISAPLG++VVD+GKS+RIT++ N+++ S QHA+T+YRV+E SSHGY W+EL P+
Sbjct: 353  RRQKGIISAPLGKVVVDDGKSDRITVVENAESTSFQHAVTQYRVME-SSHGYAWLELSPI 411

Query: 520  TGRKHQLRVHCAEVLGTPIVGDYKYGWQTHKKWKPLP-SNVDR----NAKGKK-NPFGLD 359
            TGRKHQLRVHCAEVLGTPIVGDYKYGWQ H+KWK LP  N+++    NA  KK  PFG+D
Sbjct: 412  TGRKHQLRVHCAEVLGTPIVGDYKYGWQVHRKWKQLPFPNLEKISNENALCKKILPFGID 471

Query: 358  LESGSICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQT 179
            LESGSI EK P LHLHCKQM+LPDVS AL  V+ SS  +YD S++K +E  APLPS+MQ 
Sbjct: 472  LESGSISEKHPRLHLHCKQMVLPDVSQALRGVQTSS--NYDFSDLKSIELDAPLPSYMQR 529

Query: 178  SWDVL 164
            SWD+L
Sbjct: 530  SWDIL 534


>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
            gi|557524859|gb|ESR36165.1| hypothetical protein
            CICLE_v10028283mg [Citrus clementina]
          Length = 494

 Score =  557 bits (1435), Expect = e-156
 Identities = 281/425 (66%), Positives = 345/425 (81%), Gaps = 7/425 (1%)
 Frame = -2

Query: 1417 GKWFTLPPFTSTVDASSLGKELSGRCMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQ 1238
            GKWFTLPPFTST+D S+LG++L+    S I        +  +ALKWV++CCP LPR+ VQ
Sbjct: 79   GKWFTLPPFTSTIDGSALGRQLACPSKSPI--------SETTALKWVLQCCPGLPRNFVQ 130

Query: 1237 KLFRLRQVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQFPSQKHE 1058
            KLFRL QVRRESP+  S ++    EQ+ ++ RVAAK+ + LGDRIFLPI++Q+ PS+K +
Sbjct: 131  KLFRLSQVRRESPSLDSSANEG-HEQEIKLKRVAAKDSLKLGDRIFLPISIQESPSRKEK 189

Query: 1057 CHCNEEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPPR 878
            C C EEE GFI++LELYKDSAIIV+NKP G+ VQGGIGI++S+DELAATCL YDYSEPPR
Sbjct: 190  CPCTEEEVGFIQSLELYKDSAIIVINKPHGMPVQGGIGIRRSIDELAATCLTYDYSEPPR 249

Query: 877  LVHRLDRDSSGILVMGRTQTSSTVLHSIFREKTFGAN-EDIGSKKRILERRYLALVIGSP 701
            LVHRLDRDSSGILVMGRTQTS+TVLHSIFREKTF A+ ED  ++KRIL+R Y ALV+G+P
Sbjct: 250  LVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFSASKEDNDNEKRILQRWYWALVVGTP 309

Query: 700  ARQRGIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTWVELFPL 521
               +G+ISAPL ++VVDNGKS+RIT++NN Q MS+QHA+T Y+VI+ S HGYTW++L PL
Sbjct: 310  RCSKGVISAPLRKVVVDNGKSDRITVVNNDQIMSAQHAVTRYQVIKPSCHGYTWLKLSPL 369

Query: 520  TGRKHQLRVHCAEVLGTPIVGDYKYGWQTHKKWKPL-PSNV-----DRNAKGKKNPFGLD 359
            TGRKHQLRVHCAEVLGTPIVGDYKYGWQTH+KWK   PS++     D   K K   FGLD
Sbjct: 370  TGRKHQLRVHCAEVLGTPIVGDYKYGWQTHRKWKQFHPSDLNKDSNDETPKEKTLHFGLD 429

Query: 358  LESGSICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQT 179
            LESGSI EKQP LHLHCK+M LP+VS A++KV++SS    D+S+++ L+ VAPLPSHMQ 
Sbjct: 430  LESGSILEKQPGLHLHCKEMTLPNVSQAIQKVQLSS--GCDVSKLESLKLVAPLPSHMQR 487

Query: 178  SWDVL 164
            SWDVL
Sbjct: 488  SWDVL 492


>ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
            gi|462395209|gb|EMJ01008.1| hypothetical protein
            PRUPE_ppa004969mg [Prunus persica]
          Length = 481

 Score =  556 bits (1433), Expect = e-155
 Identities = 300/496 (60%), Positives = 368/496 (74%), Gaps = 19/496 (3%)
 Frame = -2

Query: 1597 MVDLYLLRRAFLRSPICTAAAALKASRICISVVHEKRPHYTTASQSVXXXXXXXXXXXXK 1418
            M+   LLRR  LR P  + A      R+CIS  H  R + TT +                
Sbjct: 1    MMGPILLRRLLLRPPPSSTA------RLCISAFHNWRSYATTET-------FHEDREKRG 47

Query: 1417 GKWFTLPPFTSTVDASSLGKELS-----GRCMSGIGNKMANGYASISALKWVVRCCPQLP 1253
             KWFTLPPFT+T++ S+LGKELS     GR +       +    + +ALKWV RCCP+LP
Sbjct: 48   EKWFTLPPFTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELP 107

Query: 1252 RSLVQKLFRLRQVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQFP 1073
            RSLVQKLFRLRQVRRES +     +G  +  +R + RVAAK+ MN+GDRI LP++VQ+FP
Sbjct: 108  RSLVQKLFRLRQVRRESCDMECSGEG-VEALERPLKRVAAKDSMNVGDRIHLPLSVQEFP 166

Query: 1072 SQKHE-------CHCNEEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAA 914
            + K E       C+C+EEE  FIR+LELYKD AIIV+NKPPG+ VQGGIGI++SLDELAA
Sbjct: 167  NDKQELPNDKKECYCSEEEVTFIRSLELYKDPAIIVINKPPGMPVQGGIGIKRSLDELAA 226

Query: 913  TCLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSSTVLHSIFREKTFGA-NEDIGSKKRIL 737
             CL YD+SEPPRLVHRLDRDSSGILVMGRTQTS+TVLHSIFREKTFGA N++I   KRIL
Sbjct: 227  ACLSYDFSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGASNDEIDDAKRIL 286

Query: 736  ERRYLALVIGSPARQRGIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESS 557
            +RRY ALVIGSP +++G+ISAPLG++VVDNGKS+RITI+N+SQT+ SQHAIT+Y+VI S 
Sbjct: 287  QRRYWALVIGSPRQRKGLISAPLGKVVVDNGKSDRITIVNDSQTLPSQHAITKYKVIGSP 346

Query: 556  SHGYTWVELFPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHKKWKPLP-SNVDRNA--- 389
               YTW+EL PLTGRKHQLRVHCAEVL TPIVGDYKYGWQTH+ WKPL  SN + ++   
Sbjct: 347  C--YTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQTHRNWKPLAWSNNECHSDEE 404

Query: 388  --KGKKNPFGLDLESGSICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRL 215
              K K  PF L++ESGS+ EK P LHLHCKQM+LP+V+LAL+ V++ SD+  DLSE++ L
Sbjct: 405  FPKRKNLPFDLNMESGSVSEKNPRLHLHCKQMVLPNVNLALQNVKLHSDS--DLSELESL 462

Query: 214  EFVAPLPSHMQTSWDV 167
            E VA LPS MQ SW++
Sbjct: 463  ELVAALPSFMQRSWNI 478


>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
          Length = 470

 Score =  554 bits (1427), Expect = e-155
 Identities = 291/477 (61%), Positives = 355/477 (74%), Gaps = 7/477 (1%)
 Frame = -2

Query: 1582 LLRRAFLRSPICTAAAALKASRICISVVHEKRPHYTTASQSVXXXXXXXXXXXXKGKWFT 1403
            LLRR  L SP  TA   +  +++  S  H    HY+ +S+                KWFT
Sbjct: 6    LLRRLLLLSPPRTADHCV--AKLSPSTFHYHLSHYSASSEK------------NGTKWFT 51

Query: 1402 LPPFTSTVDASSLGKELSGRCMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQKLFRL 1223
            LPP T+TVD + LGK ++G     +    A+  A+ +ALKWVVRCCP+LPRSLVQKLFRL
Sbjct: 52   LPPHTATVDGAVLGKAIAGAKDDDVKVLQASKSAATTALKWVVRCCPELPRSLVQKLFRL 111

Query: 1222 RQVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQFPSQKHECHCNE 1043
            RQVRRES N    + G  Q  K R+ RV+AK+ +NLGD+IFLPI+V++ P +K EC CNE
Sbjct: 112  RQVRRESFNVEDCNAGD-QLGKPRLRRVSAKDSLNLGDKIFLPISVKELPVEKKECFCNE 170

Query: 1042 EETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPPRLVHRL 863
            EE  FIR+LELYKD AI+VVNKPPGL VQGGIGI+ SLD+LA TCL YDY+EPPRLVHRL
Sbjct: 171  EEVKFIRSLELYKDPAIVVVNKPPGLPVQGGIGIKTSLDQLAVTCLSYDYTEPPRLVHRL 230

Query: 862  DRDSSGILVMGRTQTSSTVLHSIFREKTFGANEDIGSK-KRILERRYLALVIGSPARQRG 686
            DRD SGILVMGRTQTS+TVLHSIFREKTFGA+ D   K K +L+RRY A VIGSP    G
Sbjct: 231  DRDCSGILVMGRTQTSATVLHSIFREKTFGASNDETVKGKIVLQRRYWAFVIGSPRHPNG 290

Query: 685  IISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTWVELFPLTGRKH 506
            +ISAPL ++V+DNGKS+RIT++N S T+SSQHAIT+Y+VI SSSHGYTW+EL PLTGRKH
Sbjct: 291  LISAPLRKVVLDNGKSDRITVVNGSHTLSSQHAITKYKVIGSSSHGYTWLELSPLTGRKH 350

Query: 505  QLRVHCAEVLGTPIVGDYKYGWQTHKKWKPL----PSN--VDRNAKGKKNPFGLDLESGS 344
            QLRVHCAEVLGTP+VGDYKYGWQ H+ WKPL    P N  ++   K K  PFGL++++GS
Sbjct: 351  QLRVHCAEVLGTPMVGDYKYGWQAHRDWKPLHWPDPDNKCIEVLPKRKNLPFGLNMDNGS 410

Query: 343  ICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQTSW 173
            I EK P LHLHCKQM+LP++S  L+ V+  S  DY+LS ++RL+  APLPS+MQ SW
Sbjct: 411  ISEKHPRLHLHCKQMVLPNISHVLQNVQRYS--DYELSRLERLKLDAPLPSYMQRSW 465


>ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
            gi|508706469|gb|EOX98365.1| Ribosomal pseudouridine
            synthase, putative [Theobroma cacao]
          Length = 477

 Score =  537 bits (1383), Expect = e-150
 Identities = 274/460 (59%), Positives = 352/460 (76%), Gaps = 9/460 (1%)
 Frame = -2

Query: 1516 ICISVVHEKRPHYTTASQ--SVXXXXXXXXXXXXKGKWFTLPPFTSTVDASSLGKELSGR 1343
            + +S  H+ R HY+T ++  +             K KWFTLPPFT TV+AS LG +LSG+
Sbjct: 26   LIVSAFHQLRYHYSTTNELSAEHLKDDGNSEKKKKNKWFTLPPFTKTVNASVLGAKLSGK 85

Query: 1342 CMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQKLFRLRQVRRESPNTTSESDGSCQE 1163
              S   N+        +A+KWV+RCCP+LPRSLVQKLFRLRQVRRES       DG CQ 
Sbjct: 86   PHSKAANET-------TAVKWVMRCCPELPRSLVQKLFRLRQVRRESHVLEVAGDG-CQV 137

Query: 1162 QKRRVTRVAAKELMNLGDRIFLPITVQQFPSQKHECHCNEEETGFIRNLELYKDSAIIVV 983
            Q  ++ RV AK+ +N+GDRIFLP +V++F  +K E  C EEE  FIR LELYKD AIIV+
Sbjct: 138  QTVQLKRVGAKDALNIGDRIFLPFSVREFREEKQESGCTEEELNFIRGLELYKDPAIIVL 197

Query: 982  NKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSSTVL 803
            NKPPG+ VQGGIGI+ SLD+LAA CL +DYSEPPRLVHRLDRDSSGILVMGRTQ S+T+L
Sbjct: 198  NKPPGMPVQGGIGIKWSLDKLAAACLCFDYSEPPRLVHRLDRDSSGILVMGRTQMSATIL 257

Query: 802  HSIFREKTFGAN-EDIGSKKRILERRYLALVIGSPARQRGIISAPLGRIVVDNGKSERIT 626
            HS+FRE+T  A+ +D+ ++KRIL++RY ALVIGSP R +G+I APL ++VVD+GKS+RIT
Sbjct: 258  HSVFREETNDASKDDVDNEKRILQKRYWALVIGSPRRPKGMIVAPLRKVVVDDGKSDRIT 317

Query: 625  IMNNSQTMSSQHAITEYRVIESSSHGYTWVELFPLTGRKHQLRVHCAEVLGTPIVGDYKY 446
            + +NSQ +SSQ A TEY+VI+++SHGYTW+EL PLTGRKHQLRVHCAEVLGTPIVGDYKY
Sbjct: 318  VFDNSQIVSSQRAKTEYQVIKTTSHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKY 377

Query: 445  GWQTHKKWKPLP------SNVDRNAKGKKNPFGLDLESGSICEKQPNLHLHCKQMILPDV 284
            GWQ H++W+ LP      S+ D+  +    PFGL+++SGSI  K+P LHLHC++MI P+V
Sbjct: 378  GWQAHRRWQHLPESDLKKSSNDKCPEENMLPFGLNMDSGSISAKRPRLHLHCREMIFPNV 437

Query: 283  SLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQTSWDVL 164
            S AL+ +++S+  D+DLS++K LE VAPLPS+MQ SWD++
Sbjct: 438  SQALQNLQLST--DHDLSKLKSLEVVAPLPSYMQKSWDIM 475


>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
            vesca subsp. vesca]
          Length = 476

 Score =  536 bits (1380), Expect = e-149
 Identities = 290/486 (59%), Positives = 357/486 (73%), Gaps = 9/486 (1%)
 Frame = -2

Query: 1597 MVDLYLLRRAFLRSPICTAAAALKASRICISVVHEKRPHYTTASQSVXXXXXXXXXXXXK 1418
            M +  LLRR  LR P+ +++A     RI     H  R + TT +                
Sbjct: 1    MPNRLLLRRILLRPPLSSSSAESAVDRI----FHTFRSYSTTQT-------VHEDKQKRG 49

Query: 1417 GKWFTLPPFTSTVDASSLGKELSGRCMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQ 1238
             KWFTLPPFT TV+ ++LG+ELS      +  K  +  A+ +ALKWV RCCP++PR+LVQ
Sbjct: 50   NKWFTLPPFTDTVNGAALGRELSRSVGRDVYAK-PSAAAATTALKWVTRCCPEIPRNLVQ 108

Query: 1237 KLFRLRQVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQFPSQKH- 1061
            KLFRLRQVRRE+    S+ D S Q  KR    V  K+ MNLGDRI LPI+V++FP  K  
Sbjct: 109  KLFRLRQVRREA----SDMDQSVQPLKR----VGTKDSMNLGDRICLPISVKEFPDHKQK 160

Query: 1060 ECHCNEEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPP 881
            E HC+EEE  FIR+L LYKD AIIV+NKPPGL VQGGIGI++SLDELAATCL YD S+PP
Sbjct: 161  EGHCSEEEAEFIRSLVLYKDPAIIVINKPPGLPVQGGIGIKRSLDELAATCLSYDLSQPP 220

Query: 880  RLVHRLDRDSSGILVMGRTQTSSTVLHSIFREKTFGANED-IGSKKRILERRYLALVIGS 704
            RLVHRLDRD SGILVMGRTQTS+TVLHS+FREKTFGA++D I   K IL+RRYLALVIGS
Sbjct: 221  RLVHRLDRDCSGILVMGRTQTSATVLHSVFREKTFGASDDVIKHAKSILQRRYLALVIGS 280

Query: 703  PARQRGIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTWVELFP 524
            P +Q G+IS PLG++VVDNGKS+RITI+N +Q + SQHAIT+Y+VI SS  G+TW+EL P
Sbjct: 281  PRQQEGLISVPLGKVVVDNGKSDRITILNKAQCLPSQHAITKYKVIGSSCPGFTWLELIP 340

Query: 523  LTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHKKWKPLP-------SNVDRNAKGKKNPFG 365
            LTGRKHQLRVHCAEVLGTPIVGDYKYGW+THK WKP+        SN +R +K K  PF 
Sbjct: 341  LTGRKHQLRVHCAEVLGTPIVGDYKYGWRTHKDWKPVAWSKTECHSNEER-SKRKNLPFD 399

Query: 364  LDLESGSICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHM 185
            L+++SGSI EK   LHLH KQM+LP+VSLAL+ V++ +  + DLS ++ +E VAP+PS+M
Sbjct: 400  LNMDSGSIDEKNLRLHLHSKQMVLPNVSLALQNVKLHA--ECDLSGLESIELVAPMPSYM 457

Query: 184  QTSWDV 167
            Q SWD+
Sbjct: 458  QKSWDI 463


>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like [Solanum
            tuberosum]
          Length = 467

 Score =  512 bits (1319), Expect = e-142
 Identities = 279/486 (57%), Positives = 355/486 (73%), Gaps = 8/486 (1%)
 Frame = -2

Query: 1597 MVDLYLLRRAFLRSPICTAAAALKASRICISVVHEKRPHYTTASQSVXXXXXXXXXXXXK 1418
            M   +LLRR   RS    AA+     +   S  +  + HY T   +V            K
Sbjct: 1    MAGPWLLRRVVHRSRQLFAAS--DDVQTLYSAFYRFQCHYAT---TVTAAQVCNRNENEK 55

Query: 1417 GKWFTLPPFTSTVDASSLGKELSGRCMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQ 1238
             KW TLPPFT+TV+ ++LG+EL+G  M    +   N   +++ALKWV RCCP+LP+SLVQ
Sbjct: 56   AKWLTLPPFTATVNGAALGRELAGVKM----DVKENSTNTMTALKWVQRCCPELPKSLVQ 111

Query: 1237 KLFRLRQVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQFPSQKHE 1058
            KLFRLRQVRR+S N           +++R  RV+AKE MN+GDRIFLPITVQ+FPS+K  
Sbjct: 112  KLFRLRQVRRDSSNV----------EEQRPKRVSAKESMNVGDRIFLPITVQKFPSEKVV 161

Query: 1057 CH-CNEEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPP 881
             +  +EEE  F+ +LELYKD  I+VVNKPPG+ VQGGIGI++SLDELAA  +R++YSE P
Sbjct: 162  YYPSSEEERKFVHSLELYKDPEIVVVNKPPGMPVQGGIGIKRSLDELAAKYMRHEYSEAP 221

Query: 880  RLVHRLDRDSSGILVMGRTQTSSTVLHSIFREKTFGA-NEDIGSKKRILERRYLALVIGS 704
            RLVHRLDRD SG+LVMGRTQ S++ LHSIFREKTF + NED+ SKKRIL+++Y ALVIG 
Sbjct: 222  RLVHRLDRDCSGLLVMGRTQLSASALHSIFREKTFDSQNEDLESKKRILQKKYWALVIGC 281

Query: 703  PARQRGIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTWVELFP 524
            P R  GIISAPLG++V+DNGKSERITIM++ +  S+Q+A+TEYR+I SS  GYTW+EL P
Sbjct: 282  PRRSGGIISAPLGKLVLDNGKSERITIMSDVRAPSAQYAVTEYRIIGSSEKGYTWLELSP 341

Query: 523  LTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHKKWK--PLPSNV----DRNAKGKKNPFGL 362
            LTGRKHQLRVHCAE LGTPIVGDYKYGWQ H+K K  PLP++V     +  + K +PF L
Sbjct: 342  LTGRKHQLRVHCAEALGTPIVGDYKYGWQAHRKLKHLPLPTSVLNLGVQIPRQKPDPFNL 401

Query: 361  DLESGSICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQ 182
             L +GSI +KQP+LHLHCK+M+LP++SLAL++ +V SD   DL +V+ ++ VAPLP HMQ
Sbjct: 402  RLGNGSISDKQPHLHLHCKEMVLPNISLALQRAQVVSDT--DLVDVESIKLVAPLPFHMQ 459

Query: 181  TSWDVL 164
             SWD L
Sbjct: 460  KSWDCL 465


>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
            lycopersicum]
          Length = 467

 Score =  508 bits (1307), Expect = e-141
 Identities = 277/482 (57%), Positives = 351/482 (72%), Gaps = 8/482 (1%)
 Frame = -2

Query: 1585 YLLRRAFLRSPICTAAAALKASRICISVVHEKRPHYTTASQSVXXXXXXXXXXXXKGKWF 1406
            +L RR F RS    AA+     +   S  +  + HY T   +V            K KW 
Sbjct: 5    WLFRRVFHRSRQLFAAS--DDVQTLYSAFYRLQCHYAT---TVTDAQVCNRNENEKAKWL 59

Query: 1405 TLPPFTSTVDASSLGKELSGRCMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQKLFR 1226
            TLPPFT+ V+ ++LG+EL+G  M    +   N   +++ALKWV RCCP+LP+SLVQKLFR
Sbjct: 60   TLPPFTAAVNGAALGRELAGVKM----DVNENSTNTMTALKWVQRCCPELPKSLVQKLFR 115

Query: 1225 LRQVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQFPSQKHECH-C 1049
            LRQVRR+S N           +++R  RV+AKE MN+GDRIFLPITVQ+FPS+K   +  
Sbjct: 116  LRQVRRDSSNV----------EEQRPKRVSAKESMNVGDRIFLPITVQKFPSEKVVYYPS 165

Query: 1048 NEEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPPRLVH 869
            +EEE  F+ +LELYKD+ IIVVNKPPG+ VQGGIGI++SLDELAA  + + YSE PRLVH
Sbjct: 166  SEEERKFVHSLELYKDAEIIVVNKPPGMPVQGGIGIKRSLDELAAKYMSHQYSEAPRLVH 225

Query: 868  RLDRDSSGILVMGRTQTSSTVLHSIFREKTFGA-NEDIGSKKRILERRYLALVIGSPARQ 692
            RLDRD SG+LVMGRTQ S++ LHSIFREKTF + NED+ SKKRIL+++Y ALVIG P R 
Sbjct: 226  RLDRDCSGLLVMGRTQLSASALHSIFREKTFDSQNEDLESKKRILQKKYWALVIGCPRRS 285

Query: 691  RGIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTWVELFPLTGR 512
             GIISAPLG++V+DNGKSERITIM++ +  S+Q+A+TEYR+I SS  GYTW+EL PLTGR
Sbjct: 286  GGIISAPLGKLVLDNGKSERITIMSDVREPSAQYAVTEYRIIGSSEKGYTWLELSPLTGR 345

Query: 511  KHQLRVHCAEVLGTPIVGDYKYGWQTHKKWK--PLPSN----VDRNAKGKKNPFGLDLES 350
            KHQLRVHCAE LGTPIVGDYKYGWQ H+K K  PLP++    V    + K +PF L L +
Sbjct: 346  KHQLRVHCAEALGTPIVGDYKYGWQAHRKLKHLPLPTSVLNLVVEIPRQKPDPFNLRLGN 405

Query: 349  GSICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQTSWD 170
            GSI +KQP+LHLHCK+M+LP++SLAL++ +V S  D DL +V+ ++ VAPLP HMQ SWD
Sbjct: 406  GSISDKQPHLHLHCKEMVLPNISLALQRAQVVS--DADLVDVESIKLVAPLPFHMQKSWD 463

Query: 169  VL 164
             L
Sbjct: 464  CL 465


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
            sativus]
          Length = 471

 Score =  505 bits (1301), Expect = e-140
 Identities = 257/423 (60%), Positives = 331/423 (78%), Gaps = 6/423 (1%)
 Frame = -2

Query: 1414 KWFTLPPFTSTVDASSLGKELSGRCMSGIGN-KMANGYASISALKWVVRCCPQLPRSLVQ 1238
            +WFTLPP+T+TV+ S LG     R M+G G  ++    A+I+ALKWV+RCCP+LPRSLVQ
Sbjct: 59   RWFTLPPYTATVNGSILGN----RIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQ 114

Query: 1237 KLFRLRQVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQFPSQKHE 1058
            KLFRLR+VRR S  +  E+     E + ++ RVAAK+++N+GD+IFLP++VQ F ++K  
Sbjct: 115  KLFRLRKVRRGS--SMIENSEYNLEARDQLKRVAAKDILNVGDQIFLPMSVQVFSTEKTR 172

Query: 1057 CHCNEEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPPR 878
             +CN+EE  F+ +L L+KD AI+V+NKPPGL VQGGIG+++SLDELAA+CL Y YSEPPR
Sbjct: 173  DYCNKEEETFMHSLVLHKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPPR 232

Query: 877  LVHRLDRDSSGILVMGRTQTSSTVLHSIFREKTFGANE---DIGSKKRILERRYLALVIG 707
            LVHRLDRDSSGIL+MGRT TS+++LHS+FREKTF A++    + S+K+IL +RY ALVIG
Sbjct: 233  LVHRLDRDSSGILIMGRTSTSTSLLHSVFREKTFEASKHANHVDSEKKILLKRYWALVIG 292

Query: 706  SPARQRGIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTWVELF 527
            SP R +G+I+APLG+IV+D+G+SE+I +++N++ M  Q AIT+Y+VI+ S HGYTW+EL 
Sbjct: 293  SPRRSKGLITAPLGKIVLDDGRSEQIMVIDNAEPMPFQQAITQYKVIK-SHHGYTWLELC 351

Query: 526  PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHKKWKPLPSNVDRNAKGKKN--PFGLDLE 353
            PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ HK WKP  SN  +N +GKK   PFGLD E
Sbjct: 352  PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKNWKPFCSNFHKN-QGKKQFLPFGLDFE 410

Query: 352  SGSICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQTSW 173
            SGSI E  P LHLHCKQ+ LPDVS AL     +   D D S ++ LE  APLPS+MQ SW
Sbjct: 411  SGSIAENSPRLHLHCKQLTLPDVSFALH----NDSLDRDCSRLECLELDAPLPSYMQKSW 466

Query: 172  DVL 164
            D++
Sbjct: 467  DII 469


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
            sativus]
          Length = 466

 Score =  502 bits (1292), Expect = e-139
 Identities = 254/423 (60%), Positives = 327/423 (77%), Gaps = 6/423 (1%)
 Frame = -2

Query: 1414 KWFTLPPFTSTVDASSLGKELSGRCMSGIGN-KMANGYASISALKWVVRCCPQLPRSLVQ 1238
            +WFTLPP+T+TV+ S LG     R M+G G  ++    A+I+ALKWV+RCCP+LPRSLVQ
Sbjct: 59   RWFTLPPYTATVNGSILGN----RIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQ 114

Query: 1237 KLFRLRQVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQFPSQKHE 1058
            KLFRLR+V R+        +  C     ++ RVAAK+++N+GD+IFLP++VQ F ++K  
Sbjct: 115  KLFRLRKVPRQL-------NVGCGNSHHQLKRVAAKDILNVGDQIFLPMSVQVFSTEKTR 167

Query: 1057 CHCNEEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPPR 878
             +CN+EE  F+ +L L+KD AI+V+NKPPGL VQGGIG+++SLDELAA+CL Y YSEPPR
Sbjct: 168  DYCNKEEETFMHSLVLHKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPPR 227

Query: 877  LVHRLDRDSSGILVMGRTQTSSTVLHSIFREKTFGANE---DIGSKKRILERRYLALVIG 707
            LVHRLDRDSSGIL+MGRT TS+++LHS+FREKTF A++    + S+K+IL +RY ALVIG
Sbjct: 228  LVHRLDRDSSGILIMGRTSTSTSLLHSVFREKTFEASKHANHVDSEKKILLKRYWALVIG 287

Query: 706  SPARQRGIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTWVELF 527
            SP R +G+I+APLG+IV+D+G+SE+I +++N++ M  Q AIT+Y+VI+ S HGYTW+EL 
Sbjct: 288  SPRRSKGLITAPLGKIVLDDGRSEQIMVIDNAEPMPFQQAITQYKVIK-SHHGYTWLELC 346

Query: 526  PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHKKWKPLPSNVDRNAKGKKN--PFGLDLE 353
            PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ HK WKP  SN  +N +GKK   PFGLD E
Sbjct: 347  PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKNWKPFCSNFHKN-QGKKQFLPFGLDFE 405

Query: 352  SGSICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQTSW 173
            SGSI E  P LHLHCKQ+ LPDVS AL     +   D D S ++ LE  APLPS+MQ SW
Sbjct: 406  SGSIAENNPRLHLHCKQLTLPDVSFALH----NDSLDRDCSRLECLELDAPLPSYMQKSW 461

Query: 172  DVL 164
            D++
Sbjct: 462  DII 464


>ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Capsella rubella]
            gi|482566291|gb|EOA30480.1| hypothetical protein
            CARUB_v10013603mg [Capsella rubella]
          Length = 476

 Score =  489 bits (1258), Expect = e-135
 Identities = 253/425 (59%), Positives = 329/425 (77%), Gaps = 6/425 (1%)
 Frame = -2

Query: 1417 GKWFTLPPFTSTVDASSLGKELSGRCMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQ 1238
            GKW TLPPF+ TVD +++GKEL+    S  G+  ++   + +AL+W++RC P LPR+LVQ
Sbjct: 53   GKWLTLPPFSPTVDGTAVGKELASEGDSITGSTDSS---TTTALRWILRCRPDLPRTLVQ 109

Query: 1237 KLFRLRQVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQF----PS 1070
            KLFRLRQVRRE     S S    + Q+ ++ RVAAKE +N+GDRI+LP++V       P+
Sbjct: 110  KLFRLRQVRREM----SVSCDGDEVQRSQLKRVAAKESLNVGDRIYLPLSVDNDAPPPPA 165

Query: 1069 QKHECHCNEEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDYS 890
            +K    C+EEE  F+ +L LYKD +IIV+NKP G++VQGG GI+ S+DELAATCL +D S
Sbjct: 166  KKESFRCSEEERKFVCSLVLYKDPSIIVLNKPHGMAVQGGTGIKTSIDELAATCLTFDKS 225

Query: 889  EPPRLVHRLDRDSSGILVMGRTQTSSTVLHSIFREKTFGANEDIGSKKRI--LERRYLAL 716
            E PRLVHRLDRD SG+LV+ RTQT++TVLHSIFREKT GA+   G KK I  L+R+Y+AL
Sbjct: 226  ESPRLVHRLDRDCSGLLVLARTQTAATVLHSIFREKTSGASA-YGVKKNIKSLKRKYMAL 284

Query: 715  VIGSPARQRGIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTWV 536
            VIG P RQRG ISAPL ++VVD+GKS+RIT+ +N + +S+QHAITEYRVIESS HGYTW+
Sbjct: 285  VIGCPRRQRGQISAPLRKVVVDDGKSDRITVNDNGELVSTQHAITEYRVIESSPHGYTWL 344

Query: 535  ELFPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHKKWKPLPSNVDRNAKGKKNPFGLDL 356
            EL PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ HK  +PL ++ +   K + +PFGLDL
Sbjct: 345  ELRPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKSREPLVTSENTPTKPQSSPFGLDL 404

Query: 355  ESGSICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQTS 176
            + G +  KQP+LHLH KQ+ LP++S  LEK++VSSD+  D+S++  L+F APLP+HMQ S
Sbjct: 405  DGGDVSSKQPHLHLHSKQIDLPNISQLLEKMQVSSDS--DISDIDSLKFDAPLPTHMQLS 462

Query: 175  WDVLK 161
            +++LK
Sbjct: 463  FNLLK 467


>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
            gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
            pseudouridine synthase 4, mitochondrial; AltName:
            Full=RNA pseudouridylate synthase 4; AltName:
            Full=RNA-uridine isomerase 4; Flags: Precursor
            gi|11994467|dbj|BAB02469.1| unnamed protein product
            [Arabidopsis thaliana] gi|110737723|dbj|BAF00800.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|134031916|gb|ABO45695.1| At3g19440 [Arabidopsis
            thaliana] gi|332642719|gb|AEE76240.1| RNA pseudourine
            synthase 4 [Arabidopsis thaliana]
          Length = 477

 Score =  488 bits (1257), Expect = e-135
 Identities = 253/426 (59%), Positives = 327/426 (76%), Gaps = 7/426 (1%)
 Frame = -2

Query: 1417 GKWFTLPPFTSTVDASSLGKELSGRCMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQ 1238
            GKW TLPPF+ T+D +++GK+L      G   K +   +  +AL+W++RC P LPR+LVQ
Sbjct: 53   GKWLTLPPFSPTIDGTAVGKDLLS---DGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQ 109

Query: 1237 KLFRLRQVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITV-----QQFP 1073
            KLFRLRQVRRE   +    DG  + Q+ ++ RVAAKE +N+GDRI+LP++V     Q  P
Sbjct: 110  KLFRLRQVRREMSMSV---DGD-ELQRSQLKRVAAKESLNVGDRIYLPLSVDNDTPQTPP 165

Query: 1072 SQKHECHCNEEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDY 893
            ++K    C++EE  F+ +L LYKD AIIV+NKP GL+VQGG GI+ S+DELAA+CL++D 
Sbjct: 166  AKKESFQCSDEERKFVCSLVLYKDPAIIVLNKPHGLAVQGGSGIKTSIDELAASCLKFDK 225

Query: 892  SEPPRLVHRLDRDSSGILVMGRTQTSSTVLHSIFREKTFGANEDIGSKKRI--LERRYLA 719
            SE PRLVHRLDRD SG+LV+ RTQT++TVLHSIFREKT GA+   G KK +  L+R+Y+A
Sbjct: 226  SESPRLVHRLDRDCSGLLVLARTQTAATVLHSIFREKTTGASA-YGVKKNVKSLKRKYMA 284

Query: 718  LVIGSPARQRGIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTW 539
            LVIG P RQRG ISAPL ++VVD+GKSERIT+ +N + +S+QHAITEYRVIESS HGYTW
Sbjct: 285  LVIGCPPRQRGQISAPLRKVVVDDGKSERITVNDNGELVSTQHAITEYRVIESSPHGYTW 344

Query: 538  VELFPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHKKWKPLPSNVDRNAKGKKNPFGLD 359
            +EL PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ HK  +P  S+ +   K   +PFGLD
Sbjct: 345  LELRPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKAREPFVSSENNPTKQSSSPFGLD 404

Query: 358  LESGSICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQT 179
            L+ G +  KQP+LHLH KQ+ LP++S  LEK++VSSD+  D+S++  L+F APLPSHMQ 
Sbjct: 405  LDGGDVSSKQPHLHLHSKQIDLPNISQLLEKMQVSSDS--DISDLDSLKFDAPLPSHMQL 462

Query: 178  SWDVLK 161
            S+++LK
Sbjct: 463  SFNLLK 468


>ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutrema salsugineum]
            gi|557107647|gb|ESQ47954.1| hypothetical protein
            EUTSA_v10020633mg [Eutrema salsugineum]
          Length = 477

 Score =  485 bits (1249), Expect = e-134
 Identities = 265/476 (55%), Positives = 342/476 (71%), Gaps = 5/476 (1%)
 Frame = -2

Query: 1573 RAFLRSPICTAAAALKASRICISVVHEKRPHYTTASQSVXXXXXXXXXXXXKGKWFTLPP 1394
            R  LRSP  T ++  +     +S  +++R + T  +               +GKW TLPP
Sbjct: 12   RRHLRSPSPTISSVFRDPSGALSAANQRRSYGTPLADD--------DDDDPRGKWLTLPP 63

Query: 1393 FTSTVDASSLGKELSGRCMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQKLFRLRQV 1214
            F+ T+DA+++GKEL     S   +  A+   S +AL+W++RC P LPR+LVQKLFRLRQV
Sbjct: 64   FSPTIDAAAVGKEL----FSDGDSVKASSDGSTTALRWILRCRPDLPRTLVQKLFRLRQV 119

Query: 1213 RRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQF---PSQKHECHCNE 1043
            RRE    +   DG  + Q+ ++ RVAAKE +NLGDRI+LP++V      P++K    C+E
Sbjct: 120  RREM---SLSCDGD-ELQRSQLKRVAAKESLNLGDRIYLPLSVNNDAPPPAKKESFCCSE 175

Query: 1042 EETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPPRLVHRL 863
            EE  F+ +L LYKD AIIV+NKP GL+VQGG GI+ S+DELAATCL +  SE PRLVHRL
Sbjct: 176  EERKFVCSLVLYKDPAIIVLNKPHGLAVQGGTGIKISIDELAATCLTFGKSESPRLVHRL 235

Query: 862  DRDSSGILVMGRTQTSSTVLHSIFREKTFGANEDIGSKKRI--LERRYLALVIGSPARQR 689
            DRD SG+LV+GRTQT++TVLHSIFREKT GA+     KK I  L+R+YLALVIG P RQR
Sbjct: 236  DRDCSGLLVLGRTQTAATVLHSIFREKTSGASA-YSVKKNIKSLKRKYLALVIGCPRRQR 294

Query: 688  GIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTWVELFPLTGRK 509
            G ISAPL ++VVD+GKS+RIT+ +N + +S+QHAITEYRVIESS HGYTW+EL PLTGRK
Sbjct: 295  GQISAPLRKVVVDDGKSDRITVNDNGELVSTQHAITEYRVIESSPHGYTWLELRPLTGRK 354

Query: 508  HQLRVHCAEVLGTPIVGDYKYGWQTHKKWKPLPSNVDRNAKGKKNPFGLDLESGSICEKQ 329
            HQLRVHCAEVLGTPI+GDYKYGWQ HK  +P  S+ +   K   +PFGLDL+ G +  KQ
Sbjct: 355  HQLRVHCAEVLGTPILGDYKYGWQAHKSREPFVSSGNTPTKPSLSPFGLDLDGGDVSSKQ 414

Query: 328  PNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQTSWDVLK 161
            P+LHLH KQ+ LP++S  LE++ VSSD+  D SE   L+F APLP+HMQ S+++LK
Sbjct: 415  PHLHLHSKQIDLPNISQLLEQLEVSSDS--DSSEHDCLKFDAPLPAHMQLSFNLLK 468


>ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
            gi|548850328|gb|ERN08832.1| hypothetical protein
            AMTR_s00015p00025410 [Amborella trichopoda]
          Length = 457

 Score =  485 bits (1248), Expect = e-134
 Identities = 249/457 (54%), Positives = 324/457 (70%), Gaps = 2/457 (0%)
 Frame = -2

Query: 1528 KASRICISVVHEKRPHYTTASQSVXXXXXXXXXXXXKGKWFTLPPFTSTVDASSLGKELS 1349
            K+ R+ +S+ H       +AS S             + KWFTLP F     + S+    +
Sbjct: 14   KSHRLLLSLTH----FTLSASLSTTASLEEDKEVRRQCKWFTLPSFPGASLSPSISTAKT 69

Query: 1348 GRCMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQKLFRLRQVRRESPNTTSESDGSC 1169
             +              S +ALKWV+RCCPQ+PRSL+QKLFRLRQVR+ES N    S    
Sbjct: 70   AKA------------PSTTALKWVLRCCPQVPRSLIQKLFRLRQVRKESLNPAIASCLHK 117

Query: 1168 QEQKRRVTRVAAKELMNLGDRIFLPITVQQFPSQKHECHCNEEETGFIRNLELYKDSAII 989
            Q Q +++ RV AK+ +N GDRIFLPITV      + +  CN+EE  +IR+LE+YKD+AI+
Sbjct: 118  QAQYQQIKRVFAKDTLNSGDRIFLPITVNPAVEVEDDYICNKEEMEYIRSLEVYKDAAIV 177

Query: 988  VVNKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSST 809
            VVNKPPGL VQGG G++ SLD L A+ L+YDYSE PRLVHRLD+DSSGILVMGRTQ S+T
Sbjct: 178  VVNKPPGLPVQGGTGVKLSLDVLVASSLKYDYSEVPRLVHRLDQDSSGILVMGRTQESTT 237

Query: 808  VLHSIFREKTFGA--NEDIGSKKRILERRYLALVIGSPARQRGIISAPLGRIVVDNGKSE 635
            +LHSIFR+KT GA  N DI + K IL+R+Y ALVIG+P    G+ISAPL ++++D+GKSE
Sbjct: 238  LLHSIFRDKTCGASFNVDIKNSKIILKRKYWALVIGNPQPSEGLISAPLSKLLLDDGKSE 297

Query: 634  RITIMNNSQTMSSQHAITEYRVIESSSHGYTWVELFPLTGRKHQLRVHCAEVLGTPIVGD 455
            RIT+  +S+  S++HAITEYRV+ SS HG+TW+EL+P TGRKHQLRVHCAEVLGTPI+GD
Sbjct: 298  RITVSEDSKNKSARHAITEYRVLRSSGHGFTWLELYPRTGRKHQLRVHCAEVLGTPILGD 357

Query: 454  YKYGWQTHKKWKPLPSNVDRNAKGKKNPFGLDLESGSICEKQPNLHLHCKQMILPDVSLA 275
            YKYGW  H+KWKP P+        +K PFGLDLE GS+ +K+P LHLHC+QM LP++SLA
Sbjct: 358  YKYGWNAHRKWKPFPTLKFEERLNRKAPFGLDLEGGSVSDKKPRLHLHCRQMTLPNMSLA 417

Query: 274  LEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQTSWDVL 164
             + +   S +  DLS++++L+ VAPLP HM+ SWD+L
Sbjct: 418  FQHLHEQSVD--DLSKLEKLDLVAPLPLHMRRSWDIL 452


>ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
            X1 [Citrus sinensis] gi|568867349|ref|XP_006487000.1|
            PREDICTED: RNA pseudouridine synthase 4,
            mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 362

 Score =  483 bits (1244), Expect = e-134
 Identities = 242/359 (67%), Positives = 300/359 (83%), Gaps = 7/359 (1%)
 Frame = -2

Query: 1219 QVRRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQFPSQKHECHCNEE 1040
            QVRRESP+  S ++    EQ+ ++ RVAAK+ + LGDRIFLPI++Q+ PS+K +C C EE
Sbjct: 5    QVRRESPSLDSSANEG-HEQEIKLKRVAAKDSLKLGDRIFLPISIQESPSRKEKCPCTEE 63

Query: 1039 ETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPPRLVHRLD 860
            E  FI++LELYKDSAIIV+NKP G+ VQGGIGI++S+DELAATCL YDYSEPPRLVHRLD
Sbjct: 64   EVEFIQSLELYKDSAIIVINKPHGMPVQGGIGIRRSIDELAATCLTYDYSEPPRLVHRLD 123

Query: 859  RDSSGILVMGRTQTSSTVLHSIFREKTFGAN-EDIGSKKRILERRYLALVIGSPARQRGI 683
            RDSSGILVMGRTQTS+TVLHSIFREKTF A+ ED  ++K+IL+R Y ALV+G+P   +G+
Sbjct: 124  RDSSGILVMGRTQTSATVLHSIFREKTFSASKEDNDNEKKILQRWYWALVVGTPRCSKGV 183

Query: 682  ISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTWVELFPLTGRKHQ 503
            ISAPLG++VVDNGKS+RIT++NN Q MS+QHA+T Y+VI+ S HGYTW++L PLTGRKHQ
Sbjct: 184  ISAPLGKVVVDNGKSDRITVVNNDQIMSAQHAVTRYQVIKPSCHGYTWLKLSPLTGRKHQ 243

Query: 502  LRVHCAEVLGTPIVGDYKYGWQTHKKWKPL-PSNVDRNA-----KGKKNPFGLDLESGSI 341
            LRVHCAEVLGTPIVGDYKYGWQTH+KWK   PS++ +++     K K   FGLDLESGSI
Sbjct: 244  LRVHCAEVLGTPIVGDYKYGWQTHRKWKQFHPSDLSKDSNEEIPKEKTLHFGLDLESGSI 303

Query: 340  CEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQTSWDVL 164
             EKQP LHLHCK+M LP+VS A++KV++SS    D+S+++ L+ VAPLPSHMQ SWDVL
Sbjct: 304  LEKQPRLHLHCKEMTLPNVSQAIQKVQLSS--GCDVSKLETLKLVAPLPSHMQRSWDVL 360


>ref|XP_002883182.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297329022|gb|EFH59441.1| pseudouridine
            synthase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 477

 Score =  483 bits (1243), Expect = e-133
 Identities = 259/478 (54%), Positives = 339/478 (70%), Gaps = 7/478 (1%)
 Frame = -2

Query: 1573 RAFLRSPICTAAAALKASRICISVVHEKRPHYTTASQSVXXXXXXXXXXXXKGKWFTLPP 1394
            R  L+SP  T +A    ++   +  H     Y+TA                +G W TLPP
Sbjct: 12   RRHLQSPSPTISAFKDPTKSLSAAAHHCSRSYSTAQTD-----------DSRGNWLTLPP 60

Query: 1393 FTSTVDASSLGKELSGRCMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQKLFRLRQV 1214
            F+ T+D +++GK+L      G   K +   +  +AL+W++RC P LPR+LVQKLFRLRQV
Sbjct: 61   FSPTIDGTAVGKDLLS---DGDSVKASTDNSKTTALRWILRCRPDLPRTLVQKLFRLRQV 117

Query: 1213 RRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQQF-----PSQKHECHC 1049
            RR+     S S    + Q+ ++ RVAAKE +N+GDRI+LP++V        P++K    C
Sbjct: 118  RRQM----SLSVDGHELQRSQLKRVAAKESLNVGDRIYLPLSVDNDTPPTPPAKKESFQC 173

Query: 1048 NEEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRYDYSEPPRLVH 869
            +EEE  F+ +L LYKD AIIV+NKP GL+VQGG GI+ S+DELAATCL +D SE PRLVH
Sbjct: 174  SEEERKFVCSLVLYKDPAIIVLNKPHGLAVQGGSGIKTSIDELAATCLTFDKSESPRLVH 233

Query: 868  RLDRDSSGILVMGRTQTSSTVLHSIFREKTFGANEDIGSKKRI--LERRYLALVIGSPAR 695
            RLDRD SG+LV+ RTQT++TVLHSIFREKT GA+   G KK I  L+R+Y+ALVIG P R
Sbjct: 234  RLDRDCSGLLVLARTQTAATVLHSIFREKTCGASA-YGVKKNIKSLKRKYMALVIGCPRR 292

Query: 694  QRGIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTWVELFPLTG 515
            Q+G ISAPL ++VVD+GKS+RIT+ +N + +S+QHAITEY+VIESS HGYTW+EL PLTG
Sbjct: 293  QKGQISAPLRKVVVDDGKSDRITVNDNGELVSTQHAITEYKVIESSPHGYTWLELRPLTG 352

Query: 514  RKHQLRVHCAEVLGTPIVGDYKYGWQTHKKWKPLPSNVDRNAKGKKNPFGLDLESGSICE 335
            RKHQLRVHCAEVLGTPI+GDYKYGWQ HK  +P  S+     K   +PFGLDL+ G +  
Sbjct: 353  RKHQLRVHCAEVLGTPILGDYKYGWQAHKAREPFVSSETTPTKPSSSPFGLDLDGGDVSS 412

Query: 334  KQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPLPSHMQTSWDVLK 161
            KQP+LHLH KQ+ LP++S  LEK++VSSD+  D+S++  L+F APLPSHMQ S+++LK
Sbjct: 413  KQPHLHLHSKQIDLPNISQLLEKMQVSSDS--DISDLDSLKFDAPLPSHMQLSFNLLK 468


>gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Mimulus guttatus]
          Length = 457

 Score =  471 bits (1212), Expect = e-130
 Identities = 246/431 (57%), Positives = 314/431 (72%), Gaps = 14/431 (3%)
 Frame = -2

Query: 1414 KWFTLPPFTSTVDASSLGKELSGRCMSGIGNKMANGYASISALKWVVRCCPQLPRSLVQK 1235
            +W TLPPF    D  S+GK LSG+             A  +ALKW+++CCP +PR LVQK
Sbjct: 46   QWLTLPPFNPNADGCSIGKRLSGQPAD----------AKTTALKWILKCCPHIPRCLVQK 95

Query: 1234 LFRLRQV-----RRESPNTTSESDGSCQEQKRRVTRVAAKELMNLGDRIFLPITVQ-QFP 1073
            LFRLRQV     R+ES N         +++++R  R+ AK+LM++GDRIFLP +V    P
Sbjct: 96   LFRLRQVHFLLIRKESSNM--------EDKEQRPKRIGAKDLMDIGDRIFLPKSVDGTSP 147

Query: 1072 SQKHECH--CNEEETGFIRNLELYKDSAIIVVNKPPGLSVQGGIGIQKSLDELAATCLRY 899
            S   E     +E+E  F+R+LELYKD AIIV+NKPPGL VQGGIGI++SLDELAA  L++
Sbjct: 148  STTAESRNFFDEKEMEFVRSLELYKDPAIIVINKPPGLPVQGGIGIKRSLDELAAKYLKF 207

Query: 898  DYSEPPRLVHRLDRDSSGILVMGRTQTSSTVLHSIFREKTFGANEDIGSKKRILERRYLA 719
            D++E PRLVHRLDRDSSGILVMGRTQ S+T+LHS+FREKTFGA+ ++   K+IL+++Y A
Sbjct: 208  DFTESPRLVHRLDRDSSGILVMGRTQLSTTILHSVFREKTFGASNNVCGNKKILQKKYWA 267

Query: 718  LVIGSPARQRGIISAPLGRIVVDNGKSERITIMNNSQTMSSQHAITEYRVIESSSHGYTW 539
            LVIGSP R+ G+IS PL ++V+DNGKSERIT+  N+ T+S+QHA+TEYRVI SSS GY+W
Sbjct: 268  LVIGSPRRREGLISVPLVKVVLDNGKSERITVAENNNTLSAQHAVTEYRVIASSSRGYSW 327

Query: 538  VELFPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHKKWKPLPSNV------DRNAKGKK 377
            +EL PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ HKK      +V      D  +K K 
Sbjct: 328  LELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGHHLDSVSDPKWGDEISKVKN 387

Query: 376  NPFGLDLESGSICEKQPNLHLHCKQMILPDVSLALEKVRVSSDNDYDLSEVKRLEFVAPL 197
            + F L+LESGSI +KQ  LHLHCK+M LPD++ AL+   ++S  D D +E+K +   A L
Sbjct: 388  DTFALELESGSISDKQFRLHLHCKEMSLPDITQALKYASINS--DLDTAEMKSITLEACL 445

Query: 196  PSHMQTSWDVL 164
            P+HMQ SW +L
Sbjct: 446  PAHMQRSWSLL 456