BLASTX nr result

ID: Paeonia25_contig00041820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00041820
         (354 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    62   6e-08
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    57   4e-06
gb|ABF81452.1| TIR-NBS type disease resistance protein [Populus ...    56   6e-06

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/65 (47%), Positives = 47/65 (72%)
 Frame = -2

Query: 203 DSEDDVVPTQEPP*QPSSIATDRPRRTIRKPAKYTDFVAYALSVYEEDTPNTYRKAMVSS 24
           +S+++ VPTQE   Q + IA  R RR I+KP+++ D VAYAL V  +D P+TY +A++SS
Sbjct: 742 ESDEEEVPTQESQQQSAPIAVRRQRRDIQKPSRFMDMVAYALPVV-DDIPSTYPEAIMSS 800

Query: 23  DSEDW 9
           +S +W
Sbjct: 801 ESGNW 805


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
 Frame = -2

Query: 245 NNEDSGVPINENVSDSEDDVVPTQEPP*QPSSIATDRPRRT-IRKPAKY--TDFVAYALS 75
           N  D   P  E+     +  +P   P     SIA DRPRR  +R P +Y   D V YAL 
Sbjct: 722 NESDLKEPEEEDQEPQTETDIPESMPSDIHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQ 781

Query: 74  VYEE-DT--PNTYRKAMVSSDSEDW 9
           V EE DT  P+TY++A++SSDSE W
Sbjct: 782 VAEEVDTSEPSTYKEAILSSDSEKW 806


>gb|ABF81452.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1309

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/64 (43%), Positives = 40/64 (62%)
 Frame = -2

Query: 218 NENVSDSEDDVVPTQEPP*QPSSIATDRPRRTIRKPAKYTDFVAYALSVYEEDTPNTYRK 39
           ++  SD ED   P      Q  SIAT +P+R I+KPA+Y + VAYAL V ++  P TY++
Sbjct: 41  SDESSDEEDATTPATT---QQESIATSKPKRVIKKPARYCNMVAYALPVIDDGIPYTYKE 97

Query: 38  AMVS 27
           A+ S
Sbjct: 98  AVQS 101


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