BLASTX nr result

ID: Paeonia25_contig00039141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00039141
         (1181 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   599   e-169
emb|CBI39452.3| unnamed protein product [Vitis vinifera]              597   e-168
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   597   e-168
emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]   595   e-167
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu...   583   e-164
gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]     580   e-163
ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, part...   579   e-163
ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfam...   567   e-159
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi...   567   e-159
ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   566   e-159
ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containi...   552   e-155
ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containi...   538   e-150
ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containi...   527   e-147
ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containi...   517   e-144
ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containi...   517   e-144
ref|XP_006592805.1| PREDICTED: pentatricopeptide repeat-containi...   517   e-144
ref|XP_006304700.1| hypothetical protein CARUB_v10011958mg [Caps...   514   e-143
ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containi...   514   e-143
ref|XP_003622527.1| Pentatricopeptide repeat-containing protein ...   511   e-142
ref|NP_171708.1| pentatricopeptide repeat-containing protein [Ar...   510   e-142

>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  599 bits (1545), Expect = e-169
 Identities = 290/384 (75%), Positives = 336/384 (87%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MKS+GVSPSVVT+NSLL ILL+RG T+MA+ ++DEML TYGV PDT TFNILI+GFC NS
Sbjct: 182  MKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNS 241

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDEGF+FFKEMSRF CDPD++TYNTLVDGLCRA KV  AHNV+ GM+KKS ++NP+VVT
Sbjct: 242  MVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVT 301

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTL+RGYCMKH+I +ALVVFEEMVS+GLKPN ITYNTLI+GLCE QK DK+K I EG L
Sbjct: 302  YTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGAL 361

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
            GGG FIPDTCT NTLMNAHC AGN+++AL+VF+KM+ L V+PDSA+YSVLIR+LCQRG+ 
Sbjct: 362  GGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNF 421

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
             RA +LFDELSEK+ILLR+DGCTPLVAAY  MFE+LC NG T KAE VFRQL+ RGTQD 
Sbjct: 422  ERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDP 481

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
             S+K LI GHCREGTFEAGYELLVLMLRRDFVPD ETY+SLIDGLL+KG P++A +TLEK
Sbjct: 482  LSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEK 541

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            M++S H+  TSTFHSIL  LL KG
Sbjct: 542  MIKSSHVPETSTFHSILARLLAKG 565



 Score =  105 bits (261), Expect = 5e-20
 Identities = 83/334 (24%), Positives = 140/334 (41%), Gaps = 36/334 (10%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT--- 388
            +  QFF      G   +  +Y  +++ L RAR +  A N L  + ++S   N  V     
Sbjct: 101  KALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRS---NGTVKLEDR 157

Query: 389  -YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGT 565
             + +LIR Y       +++ VF  M S G+ P+ +T+N+L+  L +  + +  + + +  
Sbjct: 158  FFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEM 217

Query: 566  LGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGD 745
            L      PDT TFN L+   C    VDE  + F +M   K  PD  +Y+ L+  LC+ G 
Sbjct: 218  LSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGK 277

Query: 746  LHRAVELFDELSEKQILLRED------------------------------GCTPLVAAY 835
            ++ A  + + + +K   L  D                              G  P    Y
Sbjct: 278  VNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITY 337

Query: 836  NPMFEYLCGNGNTQKAETVFRQLLNRG--TQDRPSYKTLIMGHCREGTFEAGYELLVLML 1009
            N + + LC      K + +F   L  G    D  +  TL+  HC  G      E+   M+
Sbjct: 338  NTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMM 397

Query: 1010 RRDFVPDAETYESLIDGLLKKGNPVLAQKTLEKM 1111
              +  PD+ TY  LI  L ++GN   A++  +++
Sbjct: 398  VLNVRPDSATYSVLIRNLCQRGNFERAEQLFDEL 431



 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 81/353 (22%), Positives = 152/353 (43%), Gaps = 5/353 (1%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMN 205
            +M S G+ P+ +TYN+L+  L         +++++  L   G  PDT T N L+   C  
Sbjct: 324  EMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNA 383

Query: 206  SMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSL-----DM 370
              +++  + F++M      PD  TY+ L+  LC+      A  +   + +K +       
Sbjct: 384  GNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGC 443

Query: 371  NPNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKM 550
             P V  Y ++    C     A A  VF +++ RG + + +++  LI+G C    F+    
Sbjct: 444  TPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEAGYE 502

Query: 551  ILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSL 730
            +L   L    F+PD  T+ +L++     G    A +  +KM+     P+++++  ++  L
Sbjct: 503  LLVLML-RRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARL 561

Query: 731  CQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLN 910
              +G  H +      + E +I    +  T  V         L G+G   KA  +   L  
Sbjct: 562  LAKGCAHESARFIMLMLEGKIRQNINLSTHTV-------RLLFGSGLRDKAFKIVGLLYA 614

Query: 911  RGTQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLK 1069
             G           + H R+  F   ++LL+  L +    D +  +++I+GL K
Sbjct: 615  NGYVVDMEELIGFLSHNRK--FLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCK 665


>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  597 bits (1539), Expect = e-168
 Identities = 291/384 (75%), Positives = 334/384 (86%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MK IGVSPSVVT+NSLLSI+L+RG TSMA++L+DEML TYGV PDT TFNILI+GFCMNS
Sbjct: 191  MKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNS 250

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDEGF FFKEMSRF CDPDV+TYNTLVDGLCRA KV  AHNV++GM+KKS +++PNVVT
Sbjct: 251  MVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVT 310

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTLIRGYCMK D+A+AL +  EMVSRGLKPN+ITYNTLIQGLCEAQK DK+K ILEG +
Sbjct: 311  YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 370

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
            G G FIPDTCT NTL+ AHC  G ++EA  VF+KM +L+VQPDSA+YSVL+RSLCQRGD 
Sbjct: 371  GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDF 430

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
             RA E FDEL+EK+ILL + GC PLVAAYNPMFEYLC NG T+KAE VFRQL+ RGTQD 
Sbjct: 431  RRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDP 490

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            PSYKTLI+GHCREGT EAG++LLVLMLRRDFVPDAETY  +IDGLLKKG+PVLA K+LEK
Sbjct: 491  PSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEK 550

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            ML+S HL  T+ FHSIL  L++KG
Sbjct: 551  MLKSSHLPTTAIFHSILAALVEKG 574



 Score =  126 bits (316), Expect = 2e-26
 Identities = 98/371 (26%), Positives = 162/371 (43%), Gaps = 12/371 (3%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEML-VTYGVAPDTVTFNILIKGFCM 202
            +M      P VVTYN+L+  L R G   +A  +   M+  +  ++P+ VT+  LI+G+CM
Sbjct: 261  EMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCM 320

Query: 203  NSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNV 382
               + E      EM   G  P+ ITYNTL+ GLC A+K+     +L GM+       P+ 
Sbjct: 321  KQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDG-GFIPDT 379

Query: 383  VTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEG 562
             T  TLI+ +C    + +A  VFE+M    ++P+  TY+ L++ LC+   F + +   + 
Sbjct: 380  CTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDE 439

Query: 563  TLGGGKFIPD------TCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIR 724
                   + D         +N +    C  G   +A +VF +++    Q D  SY  LI 
Sbjct: 440  LAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLIL 498

Query: 725  SLCQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQL 904
              C+ G      +L        ++LR D   P    Y  M + L   G+   A     ++
Sbjct: 499  GHCREGTPEAGFDLL------VLMLRRD-FVPDAETYGLMIDGLLKKGDPVLAHKSLEKM 551

Query: 905  LNRGTQDRPS-YKTLIMGHCREGTFEAGYELLVLML----RRDFVPDAETYESLIDGLLK 1069
            L        + + +++     +G       L+ LML    R++      T E L+  L +
Sbjct: 552  LKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQ 611

Query: 1070 KGNPVLAQKTL 1102
                + AQK L
Sbjct: 612  SRKLLEAQKML 622



 Score =  103 bits (258), Expect = 1e-19
 Identities = 88/343 (25%), Positives = 149/343 (43%), Gaps = 14/343 (4%)
 Frame = +2

Query: 11   LRCMWKMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIK 190
            L  + +M S G+ P+ +TYN+L+  L         + + + M+   G  PDT T N LIK
Sbjct: 328  LSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIK 387

Query: 191  GFCMNSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDM 370
              C    ++E F  F++MS     PD  TY+ LV  LC+      A      + +K + +
Sbjct: 388  AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 447

Query: 371  N-----PNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCE---- 523
            +     P V  Y  +    C       A  VF +++ RG + +  +Y TLI G C     
Sbjct: 448  HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTP 506

Query: 524  AQKFDKVKMILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSA 703
               FD + ++L        F+PD  T+  +++     G+   A K  +KML     P +A
Sbjct: 507  EAGFDLLVLMLR-----RDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTA 561

Query: 704  SYSVLIRSLCQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKA 883
             +  ++ +L ++G  H +  L   + E++I    D  T  +     +  +LC +    +A
Sbjct: 562  IFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTM---EELVSFLCQSRKLLEA 618

Query: 884  ETVFR-QLLNRGTQDRPSYKTLIMGHCR----EGTFEAGYELL 997
            + +    L  R + D     T+I G C+       F   YEL+
Sbjct: 619  QKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELV 661



 Score =  100 bits (249), Expect = 1e-18
 Identities = 79/324 (24%), Positives = 147/324 (45%), Gaps = 3/324 (0%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLD-MNPNVVTYT 394
            +   FF+ +   G   +  +Y  +++ L R+R +  A N +  + KKS   +      + 
Sbjct: 110  KALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFN 169

Query: 395  TLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTLGG 574
            +LIR Y       +++ VF+ M   G+ P+ +T+N+L+  + +  +    K + +  L  
Sbjct: 170  SLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDT 229

Query: 575  GKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHR 754
                PDT TFN L+   C+   VDE    F +M   K  PD  +Y+ L+  LC+ G +  
Sbjct: 230  YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKI 289

Query: 755  AVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQ-DRP 931
            A  +      K ++ +    +P V  Y  +    C   +  +A ++  ++++RG + ++ 
Sbjct: 290  AHNVV-----KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKI 344

Query: 932  SYKTLIMGHCREGTFEAGYELLVLML-RRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            +Y TLI G C     +   E+L  M+    F+PD  T  +LI      G    A    EK
Sbjct: 345  TYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEK 404

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            M        ++T+  ++  L ++G
Sbjct: 405  MSELRVQPDSATYSVLVRSLCQRG 428


>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  597 bits (1539), Expect = e-168
 Identities = 291/384 (75%), Positives = 334/384 (86%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MK IGVSPSVVT+NSLLSI+L+RG TSMA++L+DEML TYGV PDT TFNILI+GFCMNS
Sbjct: 191  MKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNS 250

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDEGF FFKEMSRF CDPDV+TYNTLVDGLCRA KV  AHNV++GM+KKS +++PNVVT
Sbjct: 251  MVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVT 310

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTLIRGYCMK D+A+AL +  EMVSRGLKPN+ITYNTLIQGLCEAQK DK+K ILEG +
Sbjct: 311  YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 370

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
            G G FIPDTCT NTL+ AHC  G ++EA  VF+KM +L+VQPDSA+YSVL+RSLCQRGD 
Sbjct: 371  GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDF 430

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
             RA E FDEL+EK+ILL + GC PLVAAYNPMFEYLC NG T+KAE VFRQL+ RGTQD 
Sbjct: 431  RRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDP 490

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            PSYKTLI+GHCREGT EAG++LLVLMLRRDFVPDAETY  +IDGLLKKG+PVLA K+LEK
Sbjct: 491  PSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEK 550

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            ML+S HL  T+ FHSIL  L++KG
Sbjct: 551  MLKSSHLPTTAIFHSILAALVEKG 574



 Score =  124 bits (310), Expect = 1e-25
 Identities = 93/370 (25%), Positives = 164/370 (44%), Gaps = 6/370 (1%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEML-VTYGVAPDTVTFNILIKGFCM 202
            +M      P VVTYN+L+  L R G   +A  +   M+  +  ++P+ VT+  LI+G+CM
Sbjct: 261  EMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCM 320

Query: 203  NSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNV 382
               + E      EM   G  P+ ITYNTL+ GLC A+K+     +L GM+       P+ 
Sbjct: 321  KQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDG-GFIPDT 379

Query: 383  VTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEG 562
             T  TLI+ +C    + +A  VFE+M    ++P+  TY+ L++ LC+   F + +     
Sbjct: 380  CTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAE----- 434

Query: 563  TLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRG 742
                 +F  +      L++                   D+  +P  A+Y+ +   LC  G
Sbjct: 435  -----EFFDELAEKEILLH-------------------DVGCKPLVAAYNPMFEYLCSNG 470

Query: 743  DLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRG-T 919
               +A  +F +L ++         T    +Y  +    C  G  +    +   +L R   
Sbjct: 471  KTKKAERVFRQLMKRG--------TQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFV 522

Query: 920  QDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKG----NPVL 1087
             D  +Y  +I G  ++G     ++ L  ML+   +P    + S++  L++KG    +  L
Sbjct: 523  PDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASL 582

Query: 1088 AQKTLEKMLR 1117
             +  LE+ +R
Sbjct: 583  VKLMLERRIR 592



 Score =  101 bits (251), Expect = 7e-19
 Identities = 90/362 (24%), Positives = 152/362 (41%), Gaps = 9/362 (2%)
 Frame = +2

Query: 11   LRCMWKMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIK 190
            L  + +M S G+ P+ +TYN+L+  L         + + + M+   G  PDT T N LIK
Sbjct: 328  LSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIK 387

Query: 191  GFCMNSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDM 370
              C    ++E F  F++MS     PD  TY+ LV  LC+      A      + +K + +
Sbjct: 388  AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 447

Query: 371  N-----PNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCE---- 523
            +     P V  Y  +    C       A  VF +++ RG + +  +Y TLI G C     
Sbjct: 448  HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTP 506

Query: 524  AQKFDKVKMILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSA 703
               FD + ++L        F+PD  T+  +++     G+   A K  +KML     P +A
Sbjct: 507  EAGFDLLVLMLR-----RDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTA 561

Query: 704  SYSVLIRSLCQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKA 883
             +  ++ +L ++G  H +  L   + E++I    D  T  V         L  +G   KA
Sbjct: 562  IFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTV-------RLLYKSGLQDKA 614

Query: 884  ETVFRQLLNRGTQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGL 1063
                  L   G   +   + L+   C+        ++L+  L +    D +   ++I GL
Sbjct: 615  FMTIGLLYENGYLVK--MEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGL 672

Query: 1064 LK 1069
             K
Sbjct: 673  CK 674



 Score =  100 bits (249), Expect = 1e-18
 Identities = 79/324 (24%), Positives = 147/324 (45%), Gaps = 3/324 (0%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLD-MNPNVVTYT 394
            +   FF+ +   G   +  +Y  +++ L R+R +  A N +  + KKS   +      + 
Sbjct: 110  KALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFN 169

Query: 395  TLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTLGG 574
            +LIR Y       +++ VF+ M   G+ P+ +T+N+L+  + +  +    K + +  L  
Sbjct: 170  SLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDT 229

Query: 575  GKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHR 754
                PDT TFN L+   C+   VDE    F +M   K  PD  +Y+ L+  LC+ G +  
Sbjct: 230  YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKI 289

Query: 755  AVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQ-DRP 931
            A  +      K ++ +    +P V  Y  +    C   +  +A ++  ++++RG + ++ 
Sbjct: 290  AHNVV-----KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKI 344

Query: 932  SYKTLIMGHCREGTFEAGYELLVLML-RRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            +Y TLI G C     +   E+L  M+    F+PD  T  +LI      G    A    EK
Sbjct: 345  TYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEK 404

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            M        ++T+  ++  L ++G
Sbjct: 405  MSELRVQPDSATYSVLVRSLCQRG 428


>emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
          Length = 1024

 Score =  595 bits (1533), Expect = e-167
 Identities = 290/383 (75%), Positives = 333/383 (86%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MK IGVSPSVVT+NSLLSI+L+RG TSMA++L+DEML TYGV PDT TFNILI+GFCMNS
Sbjct: 262  MKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNS 321

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDEGF FFKEMSRF CDPDV+TYNTLVDGLCRA KV  AHNV++GM+KKS +++PNVVT
Sbjct: 322  MVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVT 381

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTLIRGYCMK D+A+AL +  EMVSRGLKPN+ITYNTLIQGLCEAQK DK+K ILEG +
Sbjct: 382  YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 441

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
            G G FIPDTCT NTL+ AHC  G ++EA  VF+KM +L+VQPDSA+YSVL+RSLCQRGD 
Sbjct: 442  GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDF 501

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
             RA E FDEL+EK+ILL + GC PLVAAYNPMFEYLC NG T+KAE VFRQL+ RGTQD 
Sbjct: 502  RRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDP 561

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            PSYKTLI+GHCREGT EAG++LLVLMLRRDFVPDAETY  +IDGLLKKG+PVLA K+LEK
Sbjct: 562  PSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEK 621

Query: 1109 MLRSFHLAATSTFHSILDELLKK 1177
            ML+S HL  T+ FHSIL  L++K
Sbjct: 622  MLKSSHLPTTAIFHSILAALVEK 644



 Score =  121 bits (303), Expect = 7e-25
 Identities = 84/301 (27%), Positives = 136/301 (45%), Gaps = 7/301 (2%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEML-VTYGVAPDTVTFNILIKGFCM 202
            +M      P VVTYN+L+  L R G   +A  +   M+  +  ++P+ VT+  LI+G+CM
Sbjct: 332  EMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCM 391

Query: 203  NSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNV 382
               + E      EM   G  P+ ITYNTL+ GLC A+K+     +L GM+       P+ 
Sbjct: 392  KQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDG-GFIPDT 450

Query: 383  VTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEG 562
             T  TLI+ +C    + +A  VFE+M    ++P+  TY+ L++ LC+   F + +   + 
Sbjct: 451  CTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDE 510

Query: 563  TLGGGKFIPD------TCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIR 724
                   + D         +N +    C  G   +A +VF +++    Q D  SY  LI 
Sbjct: 511  LAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLIL 569

Query: 725  SLCQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQL 904
              C+ G      +L        ++LR D   P    Y  M + L   G+   A     ++
Sbjct: 570  GHCREGTPEAGFDLL------VLMLRRD-FVPDAETYGLMIDGLLKKGDPVLAHKSLEKM 622

Query: 905  L 907
            L
Sbjct: 623  L 623



 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 76/323 (23%), Positives = 141/323 (43%), Gaps = 2/323 (0%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVTYTT 397
            +   FF+ +   G   +  +Y  +++ L R+R +  A N +  + KKS            
Sbjct: 203  KALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGG---------- 252

Query: 398  LIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTLGGG 577
                       A+++ VF+ M   G+ P+ +T+N+L+  + +  +    K + +  L   
Sbjct: 253  -----------AESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTY 301

Query: 578  KFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHRA 757
               PDT TFN L+   C+   VDE    F +M   K  PD  +Y+ L+  LC+ G +  A
Sbjct: 302  GVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIA 361

Query: 758  VELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQ-DRPS 934
              +      K ++ +    +P V  Y  +    C   +  +A ++  ++++RG + ++ +
Sbjct: 362  HNVV-----KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKIT 416

Query: 935  YKTLIMGHCREGTFEAGYELLVLML-RRDFVPDAETYESLIDGLLKKGNPVLAQKTLEKM 1111
            Y TLI G C     +   E+L  M+    F+PD  T  +LI      G    A    EKM
Sbjct: 417  YNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKM 476

Query: 1112 LRSFHLAATSTFHSILDELLKKG 1180
                    ++T+  ++  L ++G
Sbjct: 477  SELRVQPDSATYSVLVRSLCQRG 499



 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 9/252 (3%)
 Frame = +2

Query: 11   LRCMWKMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIK 190
            L  + +M S G+ P+ +TYN+L+  L         + + + M+   G  PDT T N LIK
Sbjct: 399  LSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIK 458

Query: 191  GFCMNSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDM 370
              C    ++E F  F++MS     PD  TY+ LV  LC+      A      + +K + +
Sbjct: 459  AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 518

Query: 371  N-----PNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCE---- 523
            +     P V  Y  +    C       A  VF +++ RG + +  +Y TLI G C     
Sbjct: 519  HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTP 577

Query: 524  AQKFDKVKMILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSA 703
               FD + ++L        F+PD  T+  +++     G+   A K  +KML     P +A
Sbjct: 578  EAGFDLLVLMLR-----RDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTA 632

Query: 704  SYSVLIRSLCQR 739
             +  ++ +L ++
Sbjct: 633  IFHSILAALVEK 644


>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
            gi|550323558|gb|ERP53036.1| hypothetical protein
            POPTR_0014s05550g [Populus trichocarpa]
          Length = 728

 Score =  583 bits (1503), Expect = e-164
 Identities = 281/382 (73%), Positives = 330/382 (86%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MKS GVSPSV+T+NSLL ILL+RG T+MA  ++DEM  TYGV PDT TFNILI+GFC NS
Sbjct: 187  MKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNS 246

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDEGF+FFKEMSRF C+PDV+TYNTLVDGLCRA KV  AHNV++GM+KK  D++P+VVT
Sbjct: 247  MVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVT 306

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTL+RGYCMK +I +ALVVFEEMVSRGLKPN ITYNTLI+GLCE QKFDK+K IL G +
Sbjct: 307  YTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAV 366

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
            GG  F+PDTCT+NTLMNA C AGN DEALK+F KM +LKVQPDSA+YSVLIR+LCQRGD 
Sbjct: 367  GGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDF 426

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
             RA +LFD+LS++ ILLR+DGCTPLVAAYNP+F++LC NG T KAE VFRQL+ +GTQD 
Sbjct: 427  ERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDP 486

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            PSYKTLI+GHC+EGTFEAGY+LL+ MLRRD+VPD ETY  LI+G L+KG P+LA KTLE+
Sbjct: 487  PSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLER 546

Query: 1109 MLRSFHLAATSTFHSILDELLK 1174
            ML+S +L  TS FHSIL ELLK
Sbjct: 547  MLKSSYLPKTSVFHSILSELLK 568



 Score =  131 bits (329), Expect = 6e-28
 Identities = 97/355 (27%), Positives = 156/355 (43%), Gaps = 7/355 (1%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTY-GVAPDTVTFNILIKGFCM 202
            +M      P VVTYN+L+  L R G   +A  +   M+     ++PD VT+  L++G+CM
Sbjct: 257  EMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCM 316

Query: 203  NSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNV 382
               +DE    F+EM   G  P+ ITYNTL+ GLC  +K      +L G +       P+ 
Sbjct: 317  KQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAV-GGRGFVPDT 375

Query: 383  VTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEG 562
             TY TL+   C   +  +AL +F++M    ++P+  TY+ LI+ LC+   F++ + + + 
Sbjct: 376  CTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDK 435

Query: 563  TLGGGKFI-PDTCT-----FNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIR 724
                   +  D CT     +N + +  C  G   +A +VF +++    Q D  SY  LI 
Sbjct: 436  LSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKTLII 494

Query: 725  SLCQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQL 904
              C+ G      +L         +LR D        Y P FE                  
Sbjct: 495  GHCKEGTFEAGYKLL------LFMLRRD--------YVPDFE------------------ 522

Query: 905  LNRGTQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLK 1069
                     +Y  LI G  ++G     Y+ L  ML+  ++P    + S++  LLK
Sbjct: 523  ---------TYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLK 568



 Score =  110 bits (276), Expect = 9e-22
 Identities = 90/327 (27%), Positives = 150/327 (45%), Gaps = 6/327 (1%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVTY-- 391
            + F+FF   SR G   D  +Y  ++D L R   +  A N L  + ++S   N +V     
Sbjct: 106  KAFEFFNWASRNGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRS---NGSVKIEDR 162

Query: 392  --TTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGT 565
               TL+R Y       +A+ +F  M S G+ P+ IT+N+L+  L +  + +    + +  
Sbjct: 163  FCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEM 222

Query: 566  LGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGD 745
             G     PDT TFN L+   C    VDE  + F +M     +PD  +Y+ L+  LC+ G 
Sbjct: 223  CGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGK 282

Query: 746  LHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQD 925
            +  A  +      K ++ +    +P V  Y  +    C      +A  VF ++++RG + 
Sbjct: 283  VRIAHNVV-----KGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKP 337

Query: 926  RP-SYKTLIMGHCREGTFEAGYELL-VLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKT 1099
               +Y TLI G C    F+   E+L   +  R FVPD  TY +L++     GN   A K 
Sbjct: 338  NDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKM 397

Query: 1100 LEKMLRSFHLAATSTFHSILDELLKKG 1180
             +KM        ++T+  ++  L ++G
Sbjct: 398  FKKMKELKVQPDSATYSVLIRNLCQRG 424



 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
 Frame = +2

Query: 11  LRCMWKMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDE------MLVTYGVAPDTVT 172
           L+   KMK + V P   TY+ L+  L +RG    A +L+D+      +L   G  P    
Sbjct: 395 LKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAA 454

Query: 173 FNILIKGFCMNSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGML 352
           +N +    C N    +  + F+++ + G   D  +Y TL+ G C+       + +L  ML
Sbjct: 455 YNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKTLIIGHCKEGTFEAGYKLLLFML 513

Query: 353 KKSLDMNPNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGL 517
           ++  D  P+  TY  LI G+  K +   A    E M+     P    +++++  L
Sbjct: 514 RR--DYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSEL 566


>gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]
          Length = 786

 Score =  580 bits (1496), Expect = e-163
 Identities = 281/384 (73%), Positives = 330/384 (85%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MK + ++PSVVT+NSLL +LL+RG T+MAR ++DEML TYGV PDT TFN+LI+GFCMNS
Sbjct: 234  MKELAIAPSVVTFNSLLLVLLKRGRTNMARNVFDEMLGTYGVEPDTFTFNVLIRGFCMNS 293

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDEGF FFKEMSRF C+PDV+TYNTLVDGLCRA KV  A NV++GM KKS+D+NPN+VT
Sbjct: 294  MVDEGFHFFKEMSRFKCEPDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKSVDLNPNIVT 353

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTLI+GYC K +I +AL+V +EM  RGLKPN ITYNTLI+GLCEAQK D V+ IL+GT+
Sbjct: 354  YTTLIKGYCGKQEIDEALLVLKEMTERGLKPNGITYNTLIKGLCEAQKLDDVRKILDGTM 413

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
              G+F+P+TCTFNTL++ HC AG +DEALKVF+KML+L+V  DSA+YS LIRSLCQRGD 
Sbjct: 414  RRGEFVPNTCTFNTLIHTHCQAGRLDEALKVFEKMLELQVLQDSATYSALIRSLCQRGDY 473

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
             RA ELFD+LS+K+ILL +DGC P+VAAYNPMFE+LC NG T+KAE VFRQL+ RGTQD 
Sbjct: 474  IRAEELFDKLSDKEILLSDDGCRPIVAAYNPMFEHLCRNGKTKKAERVFRQLMKRGTQDP 533

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAE YESLI GLL+K  P+LA+ TLEK
Sbjct: 534  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAEIYESLITGLLQKDKPLLAKTTLEK 593

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            MLRS HL   S FH IL+ELLKKG
Sbjct: 594  MLRSSHLPRASAFHCILEELLKKG 617



 Score =  134 bits (338), Expect = 6e-29
 Identities = 105/361 (29%), Positives = 162/361 (44%), Gaps = 11/361 (3%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEM-LVTYGVAPDTVTFNILIKGFCM 202
            +M      P VVTYN+L+  L R G   +AR +   M   +  + P+ VT+  LIKG+C 
Sbjct: 304  EMSRFKCEPDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKSVDLNPNIVTYTTLIKGYCG 363

Query: 203  NSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNV 382
               +DE     KEM+  G  P+ ITYNTL+ GLC A+K+     +L G +++  +  PN 
Sbjct: 364  KQEIDEALLVLKEMTERGLKPNGITYNTLIKGLCEAQKLDDVRKILDGTMRRG-EFVPNT 422

Query: 383  VTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCE-------AQKFDK 541
             T+ TLI  +C    + +AL VFE+M+   +  +  TY+ LI+ LC+        + FDK
Sbjct: 423  CTFNTLIHTHCQAGRLDEALKVFEKMLELQVLQDSATYSALIRSLCQRGDYIRAEELFDK 482

Query: 542  V--KMILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSV 715
            +  K IL   L      P    +N +    C  G   +A +VF +++    Q D  SY  
Sbjct: 483  LSDKEIL---LSDDGCRPIVAAYNPMFEHLCRNGKTKKAERVFRQLMKRGTQ-DPPSYKT 538

Query: 716  LIRSLCQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVF 895
            LI   C+ G      EL        ++LR D   P    Y  +   L        A+T  
Sbjct: 539  LIMGHCREGTFEAGYELL------VLMLRRD-FVPDAEIYESLITGLLQKDKPLLAKTTL 591

Query: 896  RQLLNRGTQDRPS-YKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKK 1072
             ++L      R S +  ++    ++G  +       LML + F  +     +LI  L   
Sbjct: 592  EKMLRSSHLPRASAFHCILEELLKKGCAKESASFATLMLEQKFRQNITLSTNLITLLFSN 651

Query: 1073 G 1075
            G
Sbjct: 652  G 652



 Score =  121 bits (303), Expect = 7e-25
 Identities = 89/327 (27%), Positives = 158/327 (48%), Gaps = 6/327 (1%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT--- 388
            + FQFFK + + G   +  +   +++ L R+R +  A N L  + KKS   N +V     
Sbjct: 153  KAFQFFKWVPQMGFSHNDQSCFMMLEILGRSRNLNAARNFLFSIEKKS---NGSVKLEDR 209

Query: 389  -YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGT 565
             + +LIR Y       +++ +F  M    + P+ +T+N+L+  L +  + +  + + +  
Sbjct: 210  FFNSLIRSYGNAGLFQESVKLFSTMKELAIAPSVVTFNSLLLVLLKRGRTNMARNVFDEM 269

Query: 566  LGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGD 745
            LG     PDT TFN L+   C+   VDE    F +M   K +PD  +Y+ L+  LC+ G 
Sbjct: 270  LGTYGVEPDTFTFNVLIRGFCMNSMVDEGFHFFKEMSRFKCEPDVVTYNTLVDGLCRAGK 329

Query: 746  LHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQD 925
            +  A  +   +S+K + L      P +  Y  + +  CG     +A  V +++  RG + 
Sbjct: 330  VDIARNVVKGMSKKSVDL-----NPNIVTYTTLIKGYCGKQEIDEALLVLKEMTERGLKP 384

Query: 926  RP-SYKTLIMGHCREGTFEAGYELLVLMLRR-DFVPDAETYESLIDGLLKKGNPVLAQKT 1099
               +Y TLI G C     +   ++L   +RR +FVP+  T+ +LI    + G    A K 
Sbjct: 385  NGITYNTLIKGLCEAQKLDDVRKILDGTMRRGEFVPNTCTFNTLIHTHCQAGRLDEALKV 444

Query: 1100 LEKMLRSFHLAATSTFHSILDELLKKG 1180
             EKML    L  ++T+ +++  L ++G
Sbjct: 445  FEKMLELQVLQDSATYSALIRSLCQRG 471



 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 79/353 (22%), Positives = 140/353 (39%), Gaps = 5/353 (1%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMN 205
            +M   G+ P+ +TYN+L+  L         R++ D  +      P+T TFN LI   C  
Sbjct: 376  EMTERGLKPNGITYNTLIKGLCEAQKLDDVRKILDGTMRRGEFVPNTCTFNTLIHTHCQA 435

Query: 206  SMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMN---- 373
              +DE  + F++M       D  TY+ L+  LC+      A  +   +  K + ++    
Sbjct: 436  GRLDEALKVFEKMLELQVLQDSATYSALIRSLCQRGDYIRAEELFDKLSDKEILLSDDGC 495

Query: 374  -PNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKM 550
             P V  Y  +    C       A  VF +++ RG + +  +Y TLI G C    F+    
Sbjct: 496  RPIVAAYNPMFEHLCRNGKTKKAERVFRQLMKRGTQ-DPPSYKTLIMGHCREGTFEAGYE 554

Query: 551  ILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSL 730
            +L   L    F+PD   + +L+           A    +KML     P ++++  ++  L
Sbjct: 555  LLVLML-RRDFVPDAEIYESLITGLLQKDKPLLAKTTLEKMLRSSHLPRASAFHCILEEL 613

Query: 731  CQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLN 910
             ++G          E +    L+ E      +     +   L  NG   KA  + + L  
Sbjct: 614  LKKG-------CAKESASFATLMLEQKFRQNITLSTNLITLLFSNGLGDKAFELIKVLYE 666

Query: 911  RGTQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLK 1069
             G   +   + L+   C++       +LL   L+++     E +  +I GL K
Sbjct: 667  SGYSVK--IEELVSFLCQKSKLLEACKLLQFSLQKNQSVGIEIFNKVIGGLSK 717



 Score = 61.6 bits (148), Expect = 6e-07
 Identities = 66/258 (25%), Positives = 100/258 (38%)
 Frame = +2

Query: 11   LRCMWKMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIK 190
            L+   KM  + V     TY++L+  L +RG    A  L+D++              IL+ 
Sbjct: 442  LKVFEKMLELQVLQDSATYSALIRSLCQRGDYIRAEELFDKL----------SDKEILLS 491

Query: 191  GFCMNSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDM 370
                    D+G           C P V  YN + + LCR  K   A  V R ++K+    
Sbjct: 492  --------DDG-----------CRPIVAAYNPMFEHLCRNGKTKKAERVFRQLMKRGTQD 532

Query: 371  NPNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKM 550
             P   +Y TLI G+C +        +   M+ R   P+   Y +LI GL +  K    K 
Sbjct: 533  PP---SYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAEIYESLITGLLQKDKPLLAKT 589

Query: 551  ILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSL 730
             LE  L     +P    F+ ++      G   E+      ML+ K + +    + LI  L
Sbjct: 590  TLEKML-RSSHLPRASAFHCILEELLKKGCAKESASFATLMLEQKFRQNITLSTNLITLL 648

Query: 731  CQRGDLHRAVELFDELSE 784
               G   +A EL   L E
Sbjct: 649  FSNGLGDKAFELIKVLYE 666


>ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica]
            gi|462415618|gb|EMJ20355.1| hypothetical protein
            PRUPE_ppa016282mg, partial [Prunus persica]
          Length = 721

 Score =  579 bits (1492), Expect = e-163
 Identities = 286/383 (74%), Positives = 329/383 (85%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MKS+GVSPSVV++NSLLSILL++G T+MA+ +YDEML  YGV PDT TFNILI+GFCMNS
Sbjct: 174  MKSLGVSPSVVSFNSLLSILLKKGRTNMAKNVYDEMLSMYGVTPDTYTFNILIRGFCMNS 233

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDEG++FFK+MS F CDPDVITYNTLVDGLCRA KV  AHNV+ GM K+S D+ PNVVT
Sbjct: 234  MVDEGYRFFKDMSGFRCDPDVITYNTLVDGLCRAGKVEIAHNVVNGMSKRSGDLTPNVVT 293

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTLIRGYC+K +I  AL + EEM +RGLKPN  TYNTLI+GLCEAQK DK+K I EGT+
Sbjct: 294  YTTLIRGYCVKQEIDKALSILEEMTTRGLKPNGFTYNTLIKGLCEAQKLDKIKEIFEGTM 353

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
             GG+F PDTCTFNTLM++HC AGN+DEALKVF KM +LKV PDSA+YSVLI SLCQRGD 
Sbjct: 354  IGGEFTPDTCTFNTLMHSHCNAGNLDEALKVFAKMSELKVPPDSATYSVLICSLCQRGDY 413

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
             RA ELFDELS+K+ILLR+DGC PLVA+YNP+F YL  NG TQKAE VFRQL+ RGTQD 
Sbjct: 414  PRAEELFDELSKKEILLRDDGCKPLVASYNPIFGYLSSNGKTQKAEEVFRQLMRRGTQDP 473

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
             SYKTLIMG+C+EGT+EAGYELLV MLRRDFVPD E Y SLIDGLL+KG P+LAQ+TLEK
Sbjct: 474  LSYKTLIMGNCKEGTYEAGYELLVWMLRRDFVPDEEIYVSLIDGLLQKGKPLLAQQTLEK 533

Query: 1109 MLRSFHLAATSTFHSILDELLKK 1177
            ML+S HL  TSTFHS+L ELLK+
Sbjct: 534  MLKSSHLPQTSTFHSLLAELLKQ 556



 Score =  110 bits (275), Expect = 1e-21
 Identities = 83/324 (25%), Positives = 147/324 (45%), Gaps = 3/324 (0%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLD-MNPNVVTYT 394
            +  QFFK +   G   +  +Y  +++ L RAR +  A N+L  + K+S   +      + 
Sbjct: 93   KALQFFKWVEVMGFSHNDQSYFLMLEILGRARNLNAARNLLFSIEKRSNGAVKLEDRFFN 152

Query: 395  TLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTLGG 574
            +LIR Y       +++ +F  M S G+ P+ +++N+L+  L +  + +  K + +  L  
Sbjct: 153  SLIRNYGRAGLFQESIKLFTTMKSLGVSPSVVSFNSLLSILLKKGRTNMAKNVYDEMLSM 212

Query: 575  GKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHR 754
                PDT TFN L+   C+   VDE  + F  M   +  PD  +Y+ L+  LC+ G +  
Sbjct: 213  YGVTPDTYTFNILIRGFCMNSMVDEGYRFFKDMSGFRCDPDVITYNTLVDGLCRAGKVEI 272

Query: 755  AVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDRP- 931
            A  + + +S+     R    TP V  Y  +    C      KA ++  ++  RG +    
Sbjct: 273  AHNVVNGMSK-----RSGDLTPNVVTYTTLIRGYCVKQEIDKALSILEEMTTRGLKPNGF 327

Query: 932  SYKTLIMGHCREGTFEAGYELLV-LMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            +Y TLI G C     +   E+    M+  +F PD  T+ +L+      GN   A K   K
Sbjct: 328  TYNTLIKGLCEAQKLDKIKEIFEGTMIGGEFTPDTCTFNTLMHSHCNAGNLDEALKVFAK 387

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            M        ++T+  ++  L ++G
Sbjct: 388  MSELKVPPDSATYSVLICSLCQRG 411



 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 82/356 (23%), Positives = 148/356 (41%), Gaps = 5/356 (1%)
 Frame = +2

Query: 11   LRCMWKMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIK 190
            L  + +M + G+ P+  TYN+L+  L         + +++  ++     PDT TFN L+ 
Sbjct: 311  LSILEEMTTRGLKPNGFTYNTLIKGLCEAQKLDKIKEIFEGTMIGGEFTPDTCTFNTLMH 370

Query: 191  GFCMNSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSL-- 364
              C    +DE  + F +MS     PD  TY+ L+  LC+      A  +   + KK +  
Sbjct: 371  SHCNAGNLDEALKVFAKMSELKVPPDSATYSVLICSLCQRGDYPRAEELFDELSKKEILL 430

Query: 365  ---DMNPNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKF 535
                  P V +Y  +            A  VF +++ RG + + ++Y TLI G C+   +
Sbjct: 431  RDDGCKPLVASYNPIFGYLSSNGKTQKAEEVFRQLMRRGTQ-DPLSYKTLIMGNCKEGTY 489

Query: 536  DKVKMILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSV 715
            +    +L   L    F+PD   + +L++     G    A +  +KML     P ++++  
Sbjct: 490  EAGYELLVWML-RRDFVPDEEIYVSLIDGLLQKGKPLLAQQTLEKMLKSSHLPQTSTFHS 548

Query: 716  LIRSLCQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVF 895
            L+  L ++   H +      + EK+I    +  T LV         L  +G   KA  + 
Sbjct: 549  LLAELLKQHCAHESASFVTLMLEKKIRQNINLSTHLV-------RLLFSHGLRDKAFEIV 601

Query: 896  RQLLNRGTQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGL 1063
              L   G   +   + L+   C+        E+L   L++    D + +  +I GL
Sbjct: 602  GMLYENGYSIK--MEELVCFLCQSRKLLEACEMLQFSLQKHQSVDIDNFNQVIVGL 655


>ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao] gi|508704486|gb|EOX96382.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein,
            putative [Theobroma cacao]
          Length = 724

 Score =  567 bits (1462), Expect = e-159
 Identities = 277/383 (72%), Positives = 325/383 (84%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MK IGVSPSVV++N+LL ILL+RG T+MA+ ++DEML TYGV+PD  TFNILI+GFCMNS
Sbjct: 186  MKGIGVSPSVVSFNNLLMILLKRGRTNMAKSVFDEMLSTYGVSPDVYTFNILIRGFCMNS 245

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDEGF+FFKEM RF CDPDV+TYNT+VDGLCRA KV  A NV+RGM KKSLD+NPNVVT
Sbjct: 246  MVDEGFRFFKEMERFKCDPDVVTYNTIVDGLCRAGKVGIARNVVRGMSKKSLDLNPNVVT 305

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTL+RGYCMK +I +ALVVF+EM+SR L+PNRITYNTLI+GL E  +++K+K ILEG  
Sbjct: 306  YTTLVRGYCMKQEIDEALVVFKEMISRRLRPNRITYNTLIKGLSEVHEYEKIKEILEGMG 365

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
              G+F+PDTCT NTL+NAHC A N+DEAL VF +M +L V PDSA+YSV+IRSLCQRGD 
Sbjct: 366  EDGRFVPDTCTLNTLINAHCNAENMDEALNVFKRMSELNVLPDSATYSVIIRSLCQRGDF 425

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
             +A E FDEL+EK+ILL + GCTPLVAAYNPMFEYLCGNG T+KAE VFRQL+ RG QD 
Sbjct: 426  EKAEEFFDELAEKEILLSDVGCTPLVAAYNPMFEYLCGNGKTKKAEIVFRQLMKRGRQDP 485

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            P+YKTLI+GHCREGTF+ GYELLVLMLRRDF P  E Y+SLI GLL+KG P+LA  TLEK
Sbjct: 486  PAYKTLILGHCREGTFKDGYELLVLMLRRDFEPGFEIYDSLICGLLQKGEPLLAHLTLEK 545

Query: 1109 MLRSFHLAATSTFHSILDELLKK 1177
            ML+S HL  TS+ HSIL ELLKK
Sbjct: 546  MLKSSHLPQTSSVHSILAELLKK 568



 Score =  105 bits (262), Expect = 4e-20
 Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 6/327 (1%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT--- 388
            +  QFF  + + G   +  ++  +++ L + R +  A N+L  + K+S   N +V     
Sbjct: 105  KALQFFDWVQKMGFPHNAQSFFLILEILGKERNLNAARNLLLSIEKRS---NGSVKLEDQ 161

Query: 389  -YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGT 565
             + +LIR Y       +++ VFE M   G+ P+ +++N L+  L +  + +  K + +  
Sbjct: 162  FFNSLIRSYGKAGLFQESIKVFETMKGIGVSPSVVSFNNLLMILLKRGRTNMAKSVFDEM 221

Query: 566  LGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGD 745
            L      PD  TFN L+   C+   VDE  + F +M   K  PD  +Y+ ++  LC+ G 
Sbjct: 222  LSTYGVSPDVYTFNILIRGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIVDGLCRAGK 281

Query: 746  LHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQ- 922
            +  A  +   +S+K + L      P V  Y  +    C      +A  VF+++++R  + 
Sbjct: 282  VGIARNVVRGMSKKSLDL-----NPNVVTYTTLVRGYCMKQEIDEALVVFKEMISRRLRP 336

Query: 923  DRPSYKTLIMGHCREGTFEAGYELLVLMLRRD-FVPDAETYESLIDGLLKKGNPVLAQKT 1099
            +R +Y TLI G      +E   E+L  M     FVPD  T  +LI+      N   A   
Sbjct: 337  NRITYNTLIKGLSEVHEYEKIKEILEGMGEDGRFVPDTCTLNTLINAHCNAENMDEALNV 396

Query: 1100 LEKMLRSFHLAATSTFHSILDELLKKG 1180
             ++M     L  ++T+  I+  L ++G
Sbjct: 397  FKRMSELNVLPDSATYSVIIRSLCQRG 423


>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  567 bits (1461), Expect = e-159
 Identities = 273/384 (71%), Positives = 329/384 (85%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MKS GVSPSVVT+NSLL+ILL+RG T+MA+++YDEML TYGV PDT TFNILI+GFCMN 
Sbjct: 175  MKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNG 234

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVD+GF+ F ++SRFGC+PDV+TYNTLVDGLCRA KVT A+NV++GM KKS+D+NPNVVT
Sbjct: 235  MVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVT 294

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTLIRGYC K +I  AL VFEEMV++GLK N ITYNTLI+GLCEA+KF+K+K ILEGT 
Sbjct: 295  YTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTA 354

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
            G G F PDTCTFNTLM+ HC AGN+D+ALKVF++M +LK+QPDSA+YS L+RSLCQ G  
Sbjct: 355  GDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHY 414

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
             +A +L D+L E++ILL  DGC PLVAAYNP+F+YLC  G T+KAE  FRQL+ RGTQD 
Sbjct: 415  EKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDP 474

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            PSYKTLIMGHC+EGTFE+GYELLVLMLR+DF+PD ETYESLI+GLL    P+LA ++LEK
Sbjct: 475  PSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEK 534

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            MLRS H   +STFHSIL +LL++G
Sbjct: 535  MLRSSHRPNSSTFHSILAKLLEQG 558



 Score =  112 bits (279), Expect = 4e-22
 Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 3/324 (0%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDM-NPNVVTYT 394
            +  QFF      G      +Y ++++ L R R + TA N L  + K+S  +       + 
Sbjct: 94   KALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFN 153

Query: 395  TLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTLGG 574
            +L+R +       +++ VF  M S G+ P+ +T+N+L+  L +  + +  K + +  L  
Sbjct: 154  SLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLST 213

Query: 575  GKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHR 754
                PDT TFN L+   C+ G VD+  ++F+ +     +PD  +Y+ L+  LC+ G +  
Sbjct: 214  YGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTV 273

Query: 755  AVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQ-DRP 931
            A  +   + +K + L      P V  Y  +    C     +KA  VF +++N+G + +  
Sbjct: 274  AYNVVKGMGKKSVDL-----NPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNI 328

Query: 932  SYKTLIMGHCREGTFEAGYELLV-LMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            +Y TLI G C    FE   ++L        F PD  T+ +L+      GN   A K  E+
Sbjct: 329  TYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFER 388

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            M        ++T+ +++  L + G
Sbjct: 389  MSELKIQPDSATYSALVRSLCQGG 412



 Score =  101 bits (252), Expect = 5e-19
 Identities = 101/421 (23%), Positives = 160/421 (38%), Gaps = 79/421 (18%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEM-LVTYGVAPDTVTFNILIKGFCMN 205
            +   G  P VVTYN+L+  L R G  ++A  +   M   +  + P+ VT+  LI+G+C  
Sbjct: 246  LSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAK 305

Query: 206  SMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVV 385
              +++    F+EM   G   + ITYNTL+ GLC ARK     ++L G        +P+  
Sbjct: 306  REIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGT-FSPDTC 364

Query: 386  TYTTLIRGYCMKHDIADALVVFEE------------------------------------ 457
            T+ TL+  +C   ++ DAL VFE                                     
Sbjct: 365  TFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKL 424

Query: 458  ------MVSRGLKPNRITYNTLIQGLCEAQKFDKVKMIL--------------------- 556
                  +   G KP    YN + + LCE  K  K +                        
Sbjct: 425  LERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGH 484

Query: 557  --EGTLGGG----------KFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDS 700
              EGT   G           F+PD  T+ +L+N          AL+  +KML    +P+S
Sbjct: 485  CKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNS 544

Query: 701  ASYSVLIRSLCQRGDLHRAVELFDELSEKQI---LLREDGCTPLVAAYNPMFEYLCGNGN 871
            +++  ++  L ++G    +  L   + +K I   L    GC  L          L G G 
Sbjct: 545  STFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRL----------LFGAGM 594

Query: 872  TQKAETVFRQLLNRGTQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESL 1051
              KA  +   L  +G   +       + HCR+     G +LL+  L      D +   ++
Sbjct: 595  NDKAFQLVHLLYGKGYSVKMEELIRYLCHCRK--VIQGSKLLLFSLESHQFVDMDLCNTV 652

Query: 1052 I 1054
            I
Sbjct: 653  I 653


>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  566 bits (1459), Expect = e-159
 Identities = 273/384 (71%), Positives = 328/384 (85%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MKS GVSPSVVT+NSLL+ILL+RG T+MA+++YDEML TYGV PDT TFNILI+GFCMN 
Sbjct: 175  MKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNG 234

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVD+GF+ F ++SRFGC+PDV+TYNTLVDGLCRA KVT A+NV++GM KKS+D+NPNVVT
Sbjct: 235  MVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVT 294

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTLIRGYC K +I  AL VFEEMV++GLK N ITYNTLI+GLCEA+KF+K+K ILEGT 
Sbjct: 295  YTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTA 354

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
            G G F PDTCTFNTLM+ HC AGN+D+ALKVF++M +LK+QPDSA+YS L+RSLCQ G  
Sbjct: 355  GDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHY 414

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
             +A +L D+L E++ILL  DGC PLVAAYNP+F+YLC  G T+KAE  FRQL+ RGTQD 
Sbjct: 415  EKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDP 474

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            PSYKTLIMGHC+EGTFE+GYELLVLMLR+DF PD ETYESLI+GLL    P+LA ++LEK
Sbjct: 475  PSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEK 534

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            MLRS H   +STFHSIL +LL++G
Sbjct: 535  MLRSSHRPNSSTFHSILAKLLEQG 558



 Score =  112 bits (279), Expect = 4e-22
 Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 3/324 (0%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDM-NPNVVTYT 394
            +  QFF      G      +Y ++++ L R R + TA N L  + K+S  +       + 
Sbjct: 94   KALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFN 153

Query: 395  TLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTLGG 574
            +L+R +       +++ VF  M S G+ P+ +T+N+L+  L +  + +  K + +  L  
Sbjct: 154  SLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLST 213

Query: 575  GKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHR 754
                PDT TFN L+   C+ G VD+  ++F+ +     +PD  +Y+ L+  LC+ G +  
Sbjct: 214  YGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTV 273

Query: 755  AVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQ-DRP 931
            A  +   + +K + L      P V  Y  +    C     +KA  VF +++N+G + +  
Sbjct: 274  AYNVVKGMGKKSVDL-----NPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNI 328

Query: 932  SYKTLIMGHCREGTFEAGYELLV-LMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            +Y TLI G C    FE   ++L        F PD  T+ +L+      GN   A K  E+
Sbjct: 329  TYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFER 388

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            M        ++T+ +++  L + G
Sbjct: 389  MSELKIQPDSATYSALVRSLCQGG 412



 Score =  100 bits (249), Expect = 1e-18
 Identities = 101/421 (23%), Positives = 159/421 (37%), Gaps = 79/421 (18%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEM-LVTYGVAPDTVTFNILIKGFCMN 205
            +   G  P VVTYN+L+  L R G  ++A  +   M   +  + P+ VT+  LI+G+C  
Sbjct: 246  LSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAK 305

Query: 206  SMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVV 385
              +++    F+EM   G   + ITYNTL+ GLC ARK     ++L G        +P+  
Sbjct: 306  REIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGT-FSPDTC 364

Query: 386  TYTTLIRGYCMKHDIADALVVFEE------------------------------------ 457
            T+ TL+  +C   ++ DAL VFE                                     
Sbjct: 365  TFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKL 424

Query: 458  ------MVSRGLKPNRITYNTLIQGLCEAQKFDKVKMIL--------------------- 556
                  +   G KP    YN + + LCE  K  K +                        
Sbjct: 425  LERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGH 484

Query: 557  --EGTLGGG----------KFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDS 700
              EGT   G           F PD  T+ +L+N          AL+  +KML    +P+S
Sbjct: 485  CKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNS 544

Query: 701  ASYSVLIRSLCQRGDLHRAVELFDELSEKQI---LLREDGCTPLVAAYNPMFEYLCGNGN 871
            +++  ++  L ++G    +  L   + +K I   L    GC  L          L G G 
Sbjct: 545  STFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRL----------LFGAGM 594

Query: 872  TQKAETVFRQLLNRGTQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESL 1051
              KA  +   L  +G   +       + HCR+     G +LL+  L      D +   ++
Sbjct: 595  NDKAFQLVHLLYGKGYSVKMEELIRYLCHCRK--VIQGSKLLLFSLESHQFVDMDLCNTV 652

Query: 1052 I 1054
            I
Sbjct: 653  I 653


>ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1128

 Score =  552 bits (1423), Expect = e-155
 Identities = 269/388 (69%), Positives = 324/388 (83%), Gaps = 5/388 (1%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MKS+G+S SV ++NSL S+LL+RG TSM R +YDEML  YGV PDT TFNILI+GFCM+S
Sbjct: 176  MKSMGISASVFSFNSLFSVLLKRGRTSMVRNVYDEMLGMYGVEPDTHTFNILIRGFCMSS 235

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLD-----MN 373
            MVDEGF FFKEM RF C+PDV+TYNTLVDGLCR  KV  A NV++GM+ KS +     +N
Sbjct: 236  MVDEGFWFFKEMERFKCEPDVVTYNTLVDGLCRDGKVEIARNVVKGMMSKSSEGELNQLN 295

Query: 374  PNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMI 553
            PNVVTYTTLIRGYC++ ++ +AL V EEM S+G+KPN ITYNTL +GLCEA++ DK+K I
Sbjct: 296  PNVVTYTTLIRGYCVRQEVDEALGVLEEMTSQGMKPNEITYNTLFKGLCEAKRLDKIKEI 355

Query: 554  LEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLC 733
            LEG + G  F PDTCTFNTLM++HCIAGN++EALKVF  M +LKV PDSA+YSVLIRS C
Sbjct: 356  LEGAMRGEGFTPDTCTFNTLMHSHCIAGNLEEALKVFRMMSELKVPPDSATYSVLIRSWC 415

Query: 734  QRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNR 913
            +R D  +A ELFDELS+KQILL + GCTP+VA+Y P+FEYLC NG T+KA+ VFRQLL R
Sbjct: 416  ERRDYSKAEELFDELSKKQILLSDCGCTPIVASYKPIFEYLCSNGRTKKADEVFRQLLKR 475

Query: 914  GTQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQ 1093
            GTQD PS+KTLIMGHCREGT+EAGY+L+VLMLRRD+VPD + Y+SLIDG L+KGNP+LAQ
Sbjct: 476  GTQDPPSFKTLIMGHCREGTYEAGYKLVVLMLRRDYVPDVKIYDSLIDGFLEKGNPLLAQ 535

Query: 1094 KTLEKMLRSFHLAATSTFHSILDELLKK 1177
            +TLEKML+S HL  TSTFHSIL  LL+K
Sbjct: 536  QTLEKMLKSSHLPRTSTFHSILAALLEK 563



 Score =  132 bits (333), Expect = 2e-28
 Identities = 102/396 (25%), Positives = 174/396 (43%), Gaps = 13/396 (3%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYG------VAPDTVTFNILI 187
            +M+     P VVTYN+L+  L R G   +AR +   M+          + P+ VT+  LI
Sbjct: 246  EMERFKCEPDVVTYNTLVDGLCRDGKVEIARNVVKGMMSKSSEGELNQLNPNVVTYTTLI 305

Query: 188  KGFCMNSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLD 367
            +G+C+   VDE     +EM+  G  P+ ITYNTL  GLC A+++     +L G ++    
Sbjct: 306  RGYCVRQEVDEALGVLEEMTSQGMKPNEITYNTLFKGLCEAKRLDKIKEILEGAMRGE-G 364

Query: 368  MNPNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVK 547
              P+  T+ TL+  +C+  ++ +AL VF  M    + P+  TY+ LI+  CE + + K +
Sbjct: 365  FTPDTCTFNTLMHSHCIAGNLEEALKVFRMMSELKVPPDSATYSVLIRSWCERRDYSKAE 424

Query: 548  MILEG------TLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASY 709
             + +        L      P   ++  +    C  G   +A +VF ++L    Q D  S+
Sbjct: 425  ELFDELSKKQILLSDCGCTPIVASYKPIFEYLCSNGRTKKADEVFRQLLKRGTQ-DPPSF 483

Query: 710  SVLIRSLCQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAET 889
              LI   C+ G      +L        ++LR D   P V  Y+ + +     GN   A+ 
Sbjct: 484  KTLIMGHCREGTYEAGYKLV------VLMLRRD-YVPDVKIYDSLIDGFLEKGNPLLAQQ 536

Query: 890  VFRQLLNRGTQDRPS-YKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLL 1066
               ++L      R S + +++     +        L  LML ++F P+ +    L+  L 
Sbjct: 537  TLEKMLKSSHLPRTSTFHSILAALLEKHCARESASLFSLMLEKNFRPNIDLSTDLLKLLF 596

Query: 1067 KKGNPVLAQKTLEKMLRSFHLAATSTFHSILDELLK 1174
             +G         EK  +   L     +   L+EL+K
Sbjct: 597  SEG-------LQEKAFKIVGLLHDGGYSIKLEELVK 625



 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 82/320 (25%), Positives = 141/320 (44%), Gaps = 6/320 (1%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT--- 388
            +  +FF  +   G      +Y T+++ L R R +  A N L  + K+S   N  V     
Sbjct: 95   QAIKFFNWVESLGFSHTSHSYFTILELLGRNRNLNAARNFLFSIEKRS---NGKVKLEDK 151

Query: 389  -YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGT 565
             + +LIR Y       +A+ VF+ M S G+  +  ++N+L   L +  +   V+ + +  
Sbjct: 152  FFNSLIRSYGAAGLFQEAVNVFKTMKSMGISASVFSFNSLFSVLLKRGRTSMVRNVYDEM 211

Query: 566  LGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGD 745
            LG     PDT TFN L+   C++  VDE    F +M   K +PD  +Y+ L+  LC+ G 
Sbjct: 212  LGMYGVEPDTHTFNILIRGFCMSSMVDEGFWFFKEMERFKCEPDVVTYNTLVDGLCRDGK 271

Query: 746  LHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQ- 922
            +  A  +   +  K      +   P V  Y  +    C      +A  V  ++ ++G + 
Sbjct: 272  VEIARNVVKGMMSKSSEGELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEEMTSQGMKP 331

Query: 923  DRPSYKTLIMGHCREGTFEAGYELLVLMLRRD-FVPDAETYESLIDGLLKKGNPVLAQKT 1099
            +  +Y TL  G C     +   E+L   +R + F PD  T+ +L+      GN   A K 
Sbjct: 332  NEITYNTLFKGLCEAKRLDKIKEILEGAMRGEGFTPDTCTFNTLMHSHCIAGNLEEALKV 391

Query: 1100 LEKMLRSFHLAATSTFHSIL 1159
              +M+    +   S  +S+L
Sbjct: 392  F-RMMSELKVPPDSATYSVL 410



 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 79/352 (22%), Positives = 151/352 (42%), Gaps = 6/352 (1%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMN 205
            +M S G+ P+ +TYN+L   L         + + +  +   G  PDT TFN L+   C+ 
Sbjct: 323  EMTSQGMKPNEITYNTLFKGLCEAKRLDKIKEILEGAMRGEGFTPDTCTFNTLMHSHCIA 382

Query: 206  SMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMN---- 373
              ++E  + F+ MS     PD  TY+ L+   C  R  + A  +   + KK + ++    
Sbjct: 383  GNLEEALKVFRMMSELKVPPDSATYSVLIRSWCERRDYSKAEELFDELSKKQILLSDCGC 442

Query: 374  -PNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDK-VK 547
             P V +Y  +    C       A  VF +++ RG + +  ++ TLI G C    ++   K
Sbjct: 443  TPIVASYKPIFEYLCSNGRTKKADEVFRQLLKRGTQ-DPPSFKTLIMGHCREGTYEAGYK 501

Query: 548  MILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRS 727
            +++   +    ++PD   +++L++     GN   A +  +KML     P ++++  ++ +
Sbjct: 502  LVV--LMLRRDYVPDVKIYDSLIDGFLEKGNPLLAQQTLEKMLKSSHLPRTSTFHSILAA 559

Query: 728  LCQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLL 907
            L ++     +  LF  + EK          P +     + + L   G  +KA  +   L 
Sbjct: 560  LLEKHCARESASLFSLMLEKNF-------RPNIDLSTDLLKLLFSEGLQEKAFKIVGLLH 612

Query: 908  NRGTQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGL 1063
            + G   +   + L+   C+        ELL   LR+      +  + +I GL
Sbjct: 613  DGGYSIK--LEELVKFLCQSRKLLEACELLQFSLRKQENVSIDILDQVILGL 662



 Score = 61.2 bits (147), Expect = 8e-07
 Identities = 64/274 (23%), Positives = 111/274 (40%), Gaps = 14/274 (5%)
 Frame = +2

Query: 11   LRCMWKMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDE------MLVTYGVAPDTVT 172
            L+    M  + V P   TY+ L+     R   S A  L+DE      +L   G  P   +
Sbjct: 389  LKVFRMMSELKVPPDSATYSVLIRSWCERRDYSKAEELFDELSKKQILLSDCGCTPIVAS 448

Query: 173  FNILIKGFCMNSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGML 352
            +  + +  C N    +  + F+++ + G   D  ++ TL+ G CR       + ++  ML
Sbjct: 449  YKPIFEYLCSNGRTKKADEVFRQLLKRGTQ-DPPSFKTLIMGHCREGTYEAGYKLVVLML 507

Query: 353  KKSLDMNPNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGL----C 520
            ++  D  P+V  Y +LI G+  K +   A    E+M+     P   T+++++  L    C
Sbjct: 508  RR--DYVPDVKIYDSLIDGFLEKGNPLLAQQTLEKMLKSSHLPRTSTFHSILAALLEKHC 565

Query: 521  EAQKFDKVKMILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDS 700
              +      ++LE       F P+      L+      G  ++A K+   + D       
Sbjct: 566  ARESASLFSLMLE-----KNFRPNIDLSTDLLKLLFSEGLQEKAFKIVGLLHD------- 613

Query: 701  ASYSV----LIRSLCQRGDLHRAVELFDELSEKQ 790
              YS+    L++ LCQ   L  A EL      KQ
Sbjct: 614  GGYSIKLEELVKFLCQSRKLLEACELLQFSLRKQ 647


>ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 718

 Score =  538 bits (1387), Expect = e-150
 Identities = 259/383 (67%), Positives = 314/383 (81%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MKS+G+SPSVVT+NSL SILL+RG T M   L+DEML T+G  PD  TFNILI+GFCMNS
Sbjct: 182  MKSLGISPSVVTFNSLFSILLKRGRTGMVYELFDEMLKTFGAKPDVYTFNILIRGFCMNS 241

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVD+GF+FFKEM R  C+PDVITYNT+VDGLCRA KV  AHNVL+GM+K+   ++PNVV+
Sbjct: 242  MVDKGFRFFKEMERHECEPDVITYNTIVDGLCRAGKVEIAHNVLKGMVKRGHQLSPNVVS 301

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTL+RGYC K ++  AL VFEEM+  GLKP  ITYNTL+QGLCEA++FD++K ILEGTL
Sbjct: 302  YTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTL 361

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
            G G  IPDTCTFNTL+  HC  GN+DEA+KVF+ ML LKV+PDSA+YS+LIRS CQ+G  
Sbjct: 362  GSGGLIPDTCTFNTLITFHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYF 421

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
             RA +LFD+L +K+ILLR+DGCTPL+AAYNPMFEY C  G T+KAE VFRQL+ RGTQD 
Sbjct: 422  DRAEKLFDDLMKKEILLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMRRGTQDP 481

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
             +Y+ LIMGHC+EGTF   +ELLVLMLRRD+VP+   YESLI+GLL+K +P +A  TLEK
Sbjct: 482  FAYELLIMGHCKEGTFNDAHELLVLMLRRDYVPNIVIYESLIEGLLQKNDPKVAYDTLEK 541

Query: 1109 MLRSFHLAATSTFHSILDELLKK 1177
            ML+S HL  +STFH IL EL+KK
Sbjct: 542  MLKSSHLPRSSTFHQILTELIKK 564



 Score =  148 bits (373), Expect = 5e-33
 Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 9/324 (2%)
 Frame = +2

Query: 173  FNILIKGFCMNSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGML 352
            FN LI+ +    +  E  + FK M   G  P V+T+N+L   L +  +    + +   ML
Sbjct: 159  FNTLIQSYGKAGLFQESLKVFKVMKSLGISPSVVTFNSLFSILLKRGRTGMVYELFDEML 218

Query: 353  KKSLDMNPNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQK 532
             K+    P+V T+  LIRG+CM   +      F+EM     +P+ ITYNT++ GLC A K
Sbjct: 219  -KTFGAKPDVYTFNILIRGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIVDGLCRAGK 277

Query: 533  FDKVKMILEGTL-GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASY 709
             +    +L+G +  G +  P+  ++ TL+  +C    V+ AL VF++M+D  ++P S +Y
Sbjct: 278  VEIAHNVLKGMVKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITY 337

Query: 710  SVLIRSLCQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAET 889
            + L++ LC+     R  E+ +        L   G  P    +N +  + C  GN  +A  
Sbjct: 338  NTLVQGLCEAKRFDRIKEILEG------TLGSGGLIPDTCTFNTLITFHCNVGNLDEAVK 391

Query: 890  VFRQLLN-RGTQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFV-------PDAETYE 1045
            VF  +L  +   D  +Y  LI   C++G F+   +L   +++++ +       P    Y 
Sbjct: 392  VFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEILLRDDGCTPLIAAYN 451

Query: 1046 SLIDGLLKKGNPVLAQKTLEKMLR 1117
             + +   K G    A+K   +++R
Sbjct: 452  PMFEYFCKIGKTKKAEKVFRQLMR 475



 Score = 98.2 bits (243), Expect = 6e-18
 Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 3/320 (0%)
 Frame = +2

Query: 230  FFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVTY-TTLIR 406
            FF    + G      +Y  ++  L  +R + +A N L  + ++S    P    Y  TLI+
Sbjct: 105  FFNWTQKMGFQHTHQSYLLMLQLLGSSRSLNSARNFLLSIPRRSNGTVPLQDRYFNTLIQ 164

Query: 407  GYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTLGGGKFI 586
             Y       ++L VF+ M S G+ P+ +T+N+L   L +  +   V  + +  L      
Sbjct: 165  SYGKAGLFQESLKVFKVMKSLGISPSVVTFNSLFSILLKRGRTGMVYELFDEMLKTFGAK 224

Query: 587  PDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHRAVEL 766
            PD  TFN L+   C+   VD+  + F +M   + +PD  +Y+ ++  LC+ G +  A  +
Sbjct: 225  PDVYTFNILIRGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIVDGLCRAGKVEIAHNV 284

Query: 767  FDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDRP-SYKT 943
                  K ++ R    +P V +Y  +    C     ++A  VF ++++ G +    +Y T
Sbjct: 285  L-----KGMVKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITYNT 339

Query: 944  LIMGHCREGTFEAGYELLVLML-RRDFVPDAETYESLIDGLLKKGNPVLAQKTLEKMLRS 1120
            L+ G C    F+   E+L   L     +PD  T+ +LI      GN   A K  E ML  
Sbjct: 340  LVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITFHCNVGNLDEAVKVFENMLYL 399

Query: 1121 FHLAATSTFHSILDELLKKG 1180
                 ++T+  ++    +KG
Sbjct: 400  KVKPDSATYSILIRSFCQKG 419



 Score = 94.4 bits (233), Expect = 9e-17
 Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 36/330 (10%)
 Frame = +2

Query: 41   GVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNSMVDE 220
            G+ P   T+N+L++     G    A ++++ ML    V PD+ T++ILI+ FC     D 
Sbjct: 365  GLIPDTCTFNTLITFHCNVGNLDEAVKVFENMLYLK-VKPDSATYSILIRSFCQKGYFDR 423

Query: 221  GFQFFKEMSRF-------GCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPN 379
              + F ++ +        GC P +  YN + +  C+  K   A  V R ++++      +
Sbjct: 424  AEKLFDDLMKKEILLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMRRGTQ---D 480

Query: 380  VVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQK----FDKVK 547
               Y  LI G+C +    DA  +   M+ R   PN + Y +LI+GL +       +D ++
Sbjct: 481  PFAYELLIMGHCKEGTFNDAHELLVLMLRRDYVPNIVIYESLIEGLLQKNDPKVAYDTLE 540

Query: 548  MILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRS 727
             +L+ +      +P + TF+ ++          E   +   MLD KV+ +    +  +R 
Sbjct: 541  KMLKSS-----HLPRSSTFHQILTELIKKNCASECASLVTLMLDNKVRQNINLSTDTVRI 595

Query: 728  LCQRGDLHRAVELFDELSEKQILLREDG-------CTPLVAA------------------ 832
            L Q G   RA E+   L E + ++  +G       C  L+ A                  
Sbjct: 596  LFQAGLRERAFEIVRCLYENEYVVDMEGLVAFLCQCRKLLEACKLLLFSSSKGHILNVDT 655

Query: 833  YNPMFEYLCGNGNTQKAETVFRQLLNRGTQ 922
             + +   LC    T +A  ++ +LL +G Q
Sbjct: 656  CSTLLSALCKASRTLEAFEIYYELLEKGVQ 685


>ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Solanum lycopersicum]
          Length = 710

 Score =  527 bits (1358), Expect = e-147
 Identities = 252/383 (65%), Positives = 311/383 (81%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MKS+G+SPSVVT+NSL +ILL+RG T M   L+DEML T+G  PD  TFNILI+GFC+NS
Sbjct: 176  MKSLGISPSVVTFNSLFTILLKRGRTGMVYELFDEMLKTFGAKPDVYTFNILIRGFCINS 235

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVD+GF+FFKEM R  C+P+VITYNT+VDGLCRA KV  AHNVL+GM K+   ++PNVV+
Sbjct: 236  MVDKGFRFFKEMERHECEPNVITYNTIVDGLCRAGKVEIAHNVLKGMAKRGHQLSPNVVS 295

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTL+RGYC K ++  AL VFEEM+ RGLKP  ITYNTL+QGLCEA++FD++K ILEGTL
Sbjct: 296  YTTLVRGYCEKQEVERALDVFEEMIDRGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTL 355

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
            G G  IPDTCTFNTL+  HC  GN+DEA+KVF+ ML LKV+PDSA+YS+LIRS CQ+G  
Sbjct: 356  GSGGLIPDTCTFNTLITYHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYF 415

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
             RA +LFD+L +K++LLR+DGCTPL+AAYNPMFEY C  G T+KAE VFRQL+ RGTQD 
Sbjct: 416  DRAEKLFDDLMKKEVLLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMRRGTQDP 475

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
             +Y+ LI GHC+EGTF   + LLVLMLRRD+VP+   YESLI+GLL+K +P +A  TLEK
Sbjct: 476  FAYELLIRGHCKEGTFNDAHGLLVLMLRRDYVPNIVIYESLIEGLLQKNDPKVAYDTLEK 535

Query: 1109 MLRSFHLAATSTFHSILDELLKK 1177
            ML+S HL  +S +H IL EL+KK
Sbjct: 536  MLKSSHLPRSSIYHQILTELIKK 558



 Score = 99.4 bits (246), Expect = 3e-18
 Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 3/320 (0%)
 Frame = +2

Query: 230  FFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVTY-TTLIR 406
            FF    + G      +Y  ++  L  +R + +A N L  + ++S    P    Y  TLI+
Sbjct: 99   FFNWTQKMGFQHTHQSYLLMLQLLGSSRSLNSARNFLLSIPRRSNGAVPLQDRYFNTLIQ 158

Query: 407  GYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTLGGGKFI 586
             Y       ++L VF+ M S G+ P+ +T+N+L   L +  +   V  + +  L      
Sbjct: 159  SYGKAGLFQESLKVFKVMKSLGISPSVVTFNSLFTILLKRGRTGMVYELFDEMLKTFGAK 218

Query: 587  PDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHRAVEL 766
            PD  TFN L+   CI   VD+  + F +M   + +P+  +Y+ ++  LC+ G +  A  +
Sbjct: 219  PDVYTFNILIRGFCINSMVDKGFRFFKEMERHECEPNVITYNTIVDGLCRAGKVEIAHNV 278

Query: 767  FDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDRP-SYKT 943
                  K +  R    +P V +Y  +    C     ++A  VF ++++RG +    +Y T
Sbjct: 279  L-----KGMAKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDRGLKPTSITYNT 333

Query: 944  LIMGHCREGTFEAGYELLVLML-RRDFVPDAETYESLIDGLLKKGNPVLAQKTLEKMLRS 1120
            L+ G C    F+   E+L   L     +PD  T+ +LI      GN   A K  E ML  
Sbjct: 334  LVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITYHCNVGNLDEAVKVFENMLYL 393

Query: 1121 FHLAATSTFHSILDELLKKG 1180
                 ++T+  ++    +KG
Sbjct: 394  KVKPDSATYSILIRSFCQKG 413



 Score = 88.6 bits (218), Expect = 5e-15
 Identities = 79/337 (23%), Positives = 139/337 (41%), Gaps = 43/337 (12%)
 Frame = +2

Query: 41   GVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNSMVDE 220
            G+ P   T+N+L++     G    A ++++ ML    V PD+ T++ILI+ FC     D 
Sbjct: 359  GLIPDTCTFNTLITYHCNVGNLDEAVKVFENMLYLK-VKPDSATYSILIRSFCQKGYFDR 417

Query: 221  GFQFFKEMSRF-------GCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPN 379
              + F ++ +        GC P +  YN + +  C+  K   A  V R ++++      +
Sbjct: 418  AEKLFDDLMKKEVLLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMRRGTQ---D 474

Query: 380  VVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQK----FDKVK 547
               Y  LIRG+C +    DA  +   M+ R   PN + Y +LI+GL +       +D ++
Sbjct: 475  PFAYELLIRGHCKEGTFNDAHGLLVLMLRRDYVPNIVIYESLIEGLLQKNDPKVAYDTLE 534

Query: 548  MILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPD---------- 697
             +L+ +      +P +  ++ ++          E   +   MLD KV+ +          
Sbjct: 535  KMLKSS-----HLPRSSIYHQILTELIKKNCASECASLVTLMLDNKVRQNINLSTDTVKI 589

Query: 698  ------------------SASYSV----LIRSLCQRGDLHRAVELFDELSEKQILLREDG 811
                                 Y V    L+  LCQR  L  A +L      K  +L  D 
Sbjct: 590  LFQTGLRERAFEIVRCLYENEYVVDMEGLVAFLCQRRKLLEACKLLLFSLSKGHILNVDT 649

Query: 812  CTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQ 922
            C+ L++A       LC      +A  ++ +LL +G Q
Sbjct: 650  CSTLLSA-------LCKARRASEAFEIYYELLEKGVQ 679


>ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like isoform X3 [Glycine max]
          Length = 734

 Score =  517 bits (1331), Expect = e-144
 Identities = 252/384 (65%), Positives = 308/384 (80%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MKSI VSPSVVT+NSL+SILL+RG T+MA+ +YDEML TYGV+PDT T+N+LI+GFC NS
Sbjct: 176  MKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNS 235

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDEGF+FF+EM  F CD DV+TYNTLVDGLCRA KV  A N++ GM KK   +NPNVVT
Sbjct: 236  MVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVT 295

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTLIRGYCMK ++ +ALVV EEM SRGLKPN ITYNTL++GLCEA K DK+K +LE   
Sbjct: 296  YTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMK 355

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
              G F PDT TFNT+++ HC AGN+DEALKVF+ M   ++  DSASYS LIRSLCQ+GD 
Sbjct: 356  SDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDY 415

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
              A +LFDEL EK+ILL + G  PL A+YNP+FE LC +G T+KAE V RQL+ RGTQD 
Sbjct: 416  DMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDP 475

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
             SY T+IMGHC+EG +E+GYELL+ MLRRDF+PD E Y+ LIDG L+K  P+LA++TLEK
Sbjct: 476  QSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEK 535

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            ML+S +   TST+HS+L +LL+KG
Sbjct: 536  MLKSSYQPKTSTWHSVLAKLLEKG 559



 Score =  130 bits (328), Expect = 8e-28
 Identities = 100/359 (27%), Positives = 163/359 (45%), Gaps = 9/359 (2%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEM-LVTYGVAPDTVTFNILIKGFCM 202
            +M+S      VVTYN+L+  L R G   +AR L + M     G+ P+ VT+  LI+G+CM
Sbjct: 246  EMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCM 305

Query: 203  NSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNV 382
               V+E     +EM+  G  P++ITYNTLV GLC A K+    +VL  M K     +P+ 
Sbjct: 306  KQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERM-KSDGGFSPDT 364

Query: 383  VTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEG 562
             T+ T+I  +C   ++ +AL VFE M    +  +  +Y+TLI+ LC+             
Sbjct: 365  FTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQ------------- 411

Query: 563  TLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKV-------QPDSASYSVLI 721
                                    G+ D A ++FD++ + ++       +P +ASY+ + 
Sbjct: 412  -----------------------KGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIF 448

Query: 722  RSLCQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQ 901
             SLC+ G   +A  +  +L ++         T    +Y  +    C  G  +    +   
Sbjct: 449  ESLCEHGKTKKAERVIRQLMKRG--------TQDPQSYTTVIMGHCKEGAYESGYELLMW 500

Query: 902  LLNRG-TQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKG 1075
            +L R    D   Y  LI G  ++       E L  ML+  + P   T+ S++  LL+KG
Sbjct: 501  MLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKG 559



 Score =  105 bits (263), Expect = 3e-20
 Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 3/324 (0%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLD-MNPNVVTYT 394
            +  +FFK   + G      +Y  +++ L R R +  A N L  + K S   +      + 
Sbjct: 95   KALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFN 154

Query: 395  TLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTLGG 574
            +LIR Y       +++ +F+ M S  + P+ +T+N+L+  L +  + +  K + +  LG 
Sbjct: 155  SLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGT 214

Query: 575  GKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHR 754
                PDTCT+N L+   C    VDE  + F +M       D  +Y+ L+  LC+ G +  
Sbjct: 215  YGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRI 274

Query: 755  AVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQ-DRP 931
            A  L + + +K      +G  P V  Y  +    C     ++A  V  ++ +RG + +  
Sbjct: 275  ARNLVNGMGKKC-----EGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMI 329

Query: 932  SYKTLIMGHCREGTFEAGYELLVLMLR-RDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            +Y TL+ G C     +   ++L  M     F PD  T+ ++I      GN   A K  E 
Sbjct: 330  TYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFES 389

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            M +    A ++++ +++  L +KG
Sbjct: 390  MKKFRIPADSASYSTLIRSLCQKG 413



 Score = 89.4 bits (220), Expect = 3e-15
 Identities = 75/311 (24%), Positives = 137/311 (44%), Gaps = 14/311 (4%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMN 205
            +M S G+ P+++TYN+L+  L         + + + M    G +PDT TFN +I   C  
Sbjct: 318  EMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCA 377

Query: 206  SMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMN---- 373
              +DE  + F+ M +F    D  +Y+TL+  LC+      A  +   + +K + ++    
Sbjct: 378  GNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGS 437

Query: 374  -PNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKM 550
             P   +Y  +    C       A  V  +++ RG +  + +Y T+I G C+   ++    
Sbjct: 438  KPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQ-SYTTVIMGHCKEGAYESGYE 496

Query: 551  ILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSL 730
            +L   L    F+PD   ++ L++          A +  +KML    QP ++++  ++  L
Sbjct: 497  LLMWML-RRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKL 555

Query: 731  CQRGDLHRA----VELFDELSEKQILLREDGCTPLVA--AYNPMFE---YLCGNGNTQKA 883
             ++G  H +    V + ++   + I L  +    L     +   FE    L  NG   K 
Sbjct: 556  LEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGYYVKI 615

Query: 884  ETVFRQLLNRG 916
            E V + LL RG
Sbjct: 616  EEVAQFLLKRG 626


>ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 741

 Score =  517 bits (1331), Expect = e-144
 Identities = 252/384 (65%), Positives = 308/384 (80%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MKSI VSPSVVT+NSL+SILL+RG T+MA+ +YDEML TYGV+PDT T+N+LI+GFC NS
Sbjct: 174  MKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNS 233

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDEGF+FF+EM  F CD DV+TYNTLVDGLCRA KV  A N++ GM KK   +NPNVVT
Sbjct: 234  MVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVT 293

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTLIRGYCMK ++ +ALVV EEM SRGLKPN ITYNTL++GLCEA K DK+K +LE   
Sbjct: 294  YTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMK 353

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
              G F PDT TFNT+++ HC AGN+DEALKVF+ M   ++  DSASYS LIRSLCQ+GD 
Sbjct: 354  SDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDY 413

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
              A +LFDEL EK+ILL + G  PL A+YNP+FE LC +G T+KAE V RQL+ RGTQD 
Sbjct: 414  DMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDP 473

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
             SY T+IMGHC+EG +E+GYELL+ MLRRDF+PD E Y+ LIDG L+K  P+LA++TLEK
Sbjct: 474  QSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEK 533

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            ML+S +   TST+HS+L +LL+KG
Sbjct: 534  MLKSSYQPKTSTWHSVLAKLLEKG 557



 Score =  130 bits (328), Expect = 8e-28
 Identities = 100/359 (27%), Positives = 163/359 (45%), Gaps = 9/359 (2%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEM-LVTYGVAPDTVTFNILIKGFCM 202
            +M+S      VVTYN+L+  L R G   +AR L + M     G+ P+ VT+  LI+G+CM
Sbjct: 244  EMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCM 303

Query: 203  NSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNV 382
               V+E     +EM+  G  P++ITYNTLV GLC A K+    +VL  M K     +P+ 
Sbjct: 304  KQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERM-KSDGGFSPDT 362

Query: 383  VTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEG 562
             T+ T+I  +C   ++ +AL VFE M    +  +  +Y+TLI+ LC+             
Sbjct: 363  FTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQ------------- 409

Query: 563  TLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKV-------QPDSASYSVLI 721
                                    G+ D A ++FD++ + ++       +P +ASY+ + 
Sbjct: 410  -----------------------KGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIF 446

Query: 722  RSLCQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQ 901
             SLC+ G   +A  +  +L ++         T    +Y  +    C  G  +    +   
Sbjct: 447  ESLCEHGKTKKAERVIRQLMKRG--------TQDPQSYTTVIMGHCKEGAYESGYELLMW 498

Query: 902  LLNRG-TQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKG 1075
            +L R    D   Y  LI G  ++       E L  ML+  + P   T+ S++  LL+KG
Sbjct: 499  MLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKG 557



 Score =  105 bits (263), Expect = 3e-20
 Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 3/324 (0%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLD-MNPNVVTYT 394
            +  +FFK   + G      +Y  +++ L R R +  A N L  + K S   +      + 
Sbjct: 93   KALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFN 152

Query: 395  TLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTLGG 574
            +LIR Y       +++ +F+ M S  + P+ +T+N+L+  L +  + +  K + +  LG 
Sbjct: 153  SLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGT 212

Query: 575  GKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHR 754
                PDTCT+N L+   C    VDE  + F +M       D  +Y+ L+  LC+ G +  
Sbjct: 213  YGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRI 272

Query: 755  AVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQ-DRP 931
            A  L + + +K      +G  P V  Y  +    C     ++A  V  ++ +RG + +  
Sbjct: 273  ARNLVNGMGKKC-----EGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMI 327

Query: 932  SYKTLIMGHCREGTFEAGYELLVLMLR-RDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            +Y TL+ G C     +   ++L  M     F PD  T+ ++I      GN   A K  E 
Sbjct: 328  TYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFES 387

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            M +    A ++++ +++  L +KG
Sbjct: 388  MKKFRIPADSASYSTLIRSLCQKG 411



 Score = 89.4 bits (220), Expect = 3e-15
 Identities = 75/311 (24%), Positives = 137/311 (44%), Gaps = 14/311 (4%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMN 205
            +M S G+ P+++TYN+L+  L         + + + M    G +PDT TFN +I   C  
Sbjct: 316  EMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCA 375

Query: 206  SMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMN---- 373
              +DE  + F+ M +F    D  +Y+TL+  LC+      A  +   + +K + ++    
Sbjct: 376  GNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGS 435

Query: 374  -PNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKM 550
             P   +Y  +    C       A  V  +++ RG +  + +Y T+I G C+   ++    
Sbjct: 436  KPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQ-SYTTVIMGHCKEGAYESGYE 494

Query: 551  ILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSL 730
            +L   L    F+PD   ++ L++          A +  +KML    QP ++++  ++  L
Sbjct: 495  LLMWML-RRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKL 553

Query: 731  CQRGDLHRA----VELFDELSEKQILLREDGCTPLVA--AYNPMFE---YLCGNGNTQKA 883
             ++G  H +    V + ++   + I L  +    L     +   FE    L  NG   K 
Sbjct: 554  LEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGYYVKI 613

Query: 884  ETVFRQLLNRG 916
            E V + LL RG
Sbjct: 614  EEVAQFLLKRG 624


>ref|XP_006592805.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like isoform X2 [Glycine max]
          Length = 743

 Score =  517 bits (1331), Expect = e-144
 Identities = 252/384 (65%), Positives = 308/384 (80%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MKSI VSPSVVT+NSL+SILL+RG T+MA+ +YDEML TYGV+PDT T+N+LI+GFC NS
Sbjct: 176  MKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNS 235

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDEGF+FF+EM  F CD DV+TYNTLVDGLCRA KV  A N++ GM KK   +NPNVVT
Sbjct: 236  MVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVT 295

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTLIRGYCMK ++ +ALVV EEM SRGLKPN ITYNTL++GLCEA K DK+K +LE   
Sbjct: 296  YTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMK 355

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
              G F PDT TFNT+++ HC AGN+DEALKVF+ M   ++  DSASYS LIRSLCQ+GD 
Sbjct: 356  SDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDY 415

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
              A +LFDEL EK+ILL + G  PL A+YNP+FE LC +G T+KAE V RQL+ RGTQD 
Sbjct: 416  DMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDP 475

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
             SY T+IMGHC+EG +E+GYELL+ MLRRDF+PD E Y+ LIDG L+K  P+LA++TLEK
Sbjct: 476  QSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEK 535

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            ML+S +   TST+HS+L +LL+KG
Sbjct: 536  MLKSSYQPKTSTWHSVLAKLLEKG 559



 Score =  130 bits (328), Expect = 8e-28
 Identities = 100/359 (27%), Positives = 163/359 (45%), Gaps = 9/359 (2%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEM-LVTYGVAPDTVTFNILIKGFCM 202
            +M+S      VVTYN+L+  L R G   +AR L + M     G+ P+ VT+  LI+G+CM
Sbjct: 246  EMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCM 305

Query: 203  NSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNV 382
               V+E     +EM+  G  P++ITYNTLV GLC A K+    +VL  M K     +P+ 
Sbjct: 306  KQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERM-KSDGGFSPDT 364

Query: 383  VTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEG 562
             T+ T+I  +C   ++ +AL VFE M    +  +  +Y+TLI+ LC+             
Sbjct: 365  FTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQ------------- 411

Query: 563  TLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKV-------QPDSASYSVLI 721
                                    G+ D A ++FD++ + ++       +P +ASY+ + 
Sbjct: 412  -----------------------KGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIF 448

Query: 722  RSLCQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQ 901
             SLC+ G   +A  +  +L ++         T    +Y  +    C  G  +    +   
Sbjct: 449  ESLCEHGKTKKAERVIRQLMKRG--------TQDPQSYTTVIMGHCKEGAYESGYELLMW 500

Query: 902  LLNRG-TQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKG 1075
            +L R    D   Y  LI G  ++       E L  ML+  + P   T+ S++  LL+KG
Sbjct: 501  MLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKG 559



 Score =  105 bits (263), Expect = 3e-20
 Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 3/324 (0%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLD-MNPNVVTYT 394
            +  +FFK   + G      +Y  +++ L R R +  A N L  + K S   +      + 
Sbjct: 95   KALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFN 154

Query: 395  TLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTLGG 574
            +LIR Y       +++ +F+ M S  + P+ +T+N+L+  L +  + +  K + +  LG 
Sbjct: 155  SLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGT 214

Query: 575  GKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHR 754
                PDTCT+N L+   C    VDE  + F +M       D  +Y+ L+  LC+ G +  
Sbjct: 215  YGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRI 274

Query: 755  AVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQ-DRP 931
            A  L + + +K      +G  P V  Y  +    C     ++A  V  ++ +RG + +  
Sbjct: 275  ARNLVNGMGKKC-----EGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMI 329

Query: 932  SYKTLIMGHCREGTFEAGYELLVLMLR-RDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            +Y TL+ G C     +   ++L  M     F PD  T+ ++I      GN   A K  E 
Sbjct: 330  TYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFES 389

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            M +    A ++++ +++  L +KG
Sbjct: 390  MKKFRIPADSASYSTLIRSLCQKG 413



 Score = 89.4 bits (220), Expect = 3e-15
 Identities = 75/311 (24%), Positives = 137/311 (44%), Gaps = 14/311 (4%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMN 205
            +M S G+ P+++TYN+L+  L         + + + M    G +PDT TFN +I   C  
Sbjct: 318  EMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCA 377

Query: 206  SMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMN---- 373
              +DE  + F+ M +F    D  +Y+TL+  LC+      A  +   + +K + ++    
Sbjct: 378  GNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGS 437

Query: 374  -PNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKM 550
             P   +Y  +    C       A  V  +++ RG +  + +Y T+I G C+   ++    
Sbjct: 438  KPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQ-SYTTVIMGHCKEGAYESGYE 496

Query: 551  ILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSL 730
            +L   L    F+PD   ++ L++          A +  +KML    QP ++++  ++  L
Sbjct: 497  LLMWML-RRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKL 555

Query: 731  CQRGDLHRA----VELFDELSEKQILLREDGCTPLVA--AYNPMFE---YLCGNGNTQKA 883
             ++G  H +    V + ++   + I L  +    L     +   FE    L  NG   K 
Sbjct: 556  LEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGYYVKI 615

Query: 884  ETVFRQLLNRG 916
            E V + LL RG
Sbjct: 616  EEVAQFLLKRG 626


>ref|XP_006304700.1| hypothetical protein CARUB_v10011958mg [Capsella rubella]
            gi|482573411|gb|EOA37598.1| hypothetical protein
            CARUB_v10011958mg [Capsella rubella]
          Length = 796

 Score =  514 bits (1324), Expect = e-143
 Identities = 248/386 (64%), Positives = 309/386 (80%), Gaps = 3/386 (0%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MK +G+SPSVVT+N LLSILL+RG T+MA  L+DEM  TYGV+PD+ TFNILI GFC NS
Sbjct: 245  MKKMGISPSVVTFNILLSILLKRGRTAMAHDLFDEMRRTYGVSPDSFTFNILISGFCKNS 304

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDE F+ FKEM  + CDPDV+TYNT++DGLCRA KV  AHNVL GM+KK+  ++PN+V+
Sbjct: 305  MVDEAFRVFKEMELYHCDPDVVTYNTIIDGLCRAGKVRIAHNVLNGMMKKATHVHPNIVS 364

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTL+RGYCMK D+ +AL+VF +M+ RGLKPN +TYNTLI+GL  AQ++D++K+IL G  
Sbjct: 365  YTTLVRGYCMKQDLDEALLVFHQMLCRGLKPNAVTYNTLIKGLSVAQRYDEIKVILNG-- 422

Query: 569  GGG---KFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQR 739
            GG     F PD CTFN L+  HC +G++D A+KVF +M+++K+ PDSASYSVLIR+LC R
Sbjct: 423  GGDAFTSFAPDACTFNILIKVHCDSGHLDAAMKVFQEMVNIKLHPDSASYSVLIRTLCLR 482

Query: 740  GDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGT 919
             +  RA  LF EL +KQ+LL +DGC PL AAYNPMFEYLC NG T++AE +FRQL+ RG 
Sbjct: 483  NEFDRAELLFKELFDKQVLLGKDGCKPLSAAYNPMFEYLCANGKTKQAEKIFRQLMKRGA 542

Query: 920  QDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKT 1099
            QD PSY+TLIMGHCREG F+A YELLVLMLRRDFVPD ETYE LIDGLLK G  +LA  T
Sbjct: 543  QDPPSYRTLIMGHCREGQFKAAYELLVLMLRRDFVPDPETYELLIDGLLKIGEALLAHDT 602

Query: 1100 LEKMLRSFHLAATSTFHSILDELLKK 1177
            L++MLRS +L   + FHS+L EL+K+
Sbjct: 603  LQRMLRSSYLPVATVFHSVLSELVKR 628



 Score =  125 bits (314), Expect = 4e-26
 Identities = 94/360 (26%), Positives = 158/360 (43%), Gaps = 7/360 (1%)
 Frame = +2

Query: 14   RCMWKMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEML-VTYGVAPDTVTFNILIK 190
            R   +M+     P VVTYN+++  L R G   +A  + + M+     V P+ V++  L++
Sbjct: 311  RVFKEMELYHCDPDVVTYNTIIDGLCRAGKVRIAHNVLNGMMKKATHVHPNIVSYTTLVR 370

Query: 191  GFCMNSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDM 370
            G+CM   +DE    F +M   G  P+ +TYNTL+ GL  A++      +L G        
Sbjct: 371  GYCMKQDLDEALLVFHQMLCRGLKPNAVTYNTLIKGLSVAQRYDEIKVILNGGGDAFTSF 430

Query: 371  NPNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKM 550
             P+  T+  LI+ +C    +  A+ VF+EMV+  L P+  +Y+ LI+ LC   +FD+ ++
Sbjct: 431  APDACTFNILIKVHCDSGHLDAAMKVFQEMVNIKLHPDSASYSVLIRTLCLRNEFDRAEL 490

Query: 551  IL------EGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYS 712
            +       +  LG     P +  +N +    C  G   +A K+F +++    Q D  SY 
Sbjct: 491  LFKELFDKQVLLGKDGCKPLSAAYNPMFEYLCANGKTKQAEKIFRQLMKRGAQ-DPPSYR 549

Query: 713  VLIRSLCQRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETV 892
             LI   C+ G    A EL        ++LR D                            
Sbjct: 550  TLIMGHCREGQFKAAYELL------VLMLRRD---------------------------- 575

Query: 893  FRQLLNRGTQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKK 1072
                      D  +Y+ LI G  + G     ++ L  MLR  ++P A  + S++  L+K+
Sbjct: 576  -------FVPDPETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATVFHSVLSELVKR 628



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 32/186 (17%)
 Frame = +2

Query: 602  FNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHRAVELFDELS 781
            FN+L+ ++  AG   E++K+F  M  + + P   ++++L+  L +RG    A +LFDE+ 
Sbjct: 222  FNSLIRSYGNAGLFQESVKLFQTMKKMGISPSVVTFNILLSILLKRGRTAMAHDLFDEMR 281

Query: 782  E-------------------KQILLRED----------GCTPLVAAYNPMFEYLCGNGNT 874
                                K  ++ E            C P V  YN + + LC  G  
Sbjct: 282  RTYGVSPDSFTFNILISGFCKNSMVDEAFRVFKEMELYHCDPDVVTYNTIIDGLCRAGKV 341

Query: 875  QKAETVFRQLLNRGTQDRP---SYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYE 1045
            + A  V   ++ + T   P   SY TL+ G+C +   +    +   ML R   P+A TY 
Sbjct: 342  RIAHNVLNGMMKKATHVHPNIVSYTTLVRGYCMKQDLDEALLVFHQMLCRGLKPNAVTYN 401

Query: 1046 SLIDGL 1063
            +LI GL
Sbjct: 402  TLIKGL 407


>ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Cicer arietinum]
          Length = 740

 Score =  514 bits (1323), Expect = e-143
 Identities = 251/383 (65%), Positives = 306/383 (79%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MKSIGVSPSV+T+NS+L ILLRRG T+MA+ ++DEML TYGV PDT T+NILI+GFC NS
Sbjct: 185  MKSIGVSPSVITFNSVLLILLRRGRTNMAKEVFDEMLSTYGVTPDTYTYNILIRGFCKNS 244

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDEGF FFKEM+ F CDPDV+TYNTLVDGLCRA K+ TAHN++ GM KK   ++P+VVT
Sbjct: 245  MVDEGFHFFKEMTSFNCDPDVVTYNTLVDGLCRAGKIKTAHNLVNGMSKKCGGLSPDVVT 304

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTLIRGYCMK ++ +ALV+ EEM  RGLKPN +TYNTLI+GLCEAQK+DK+K ILE   
Sbjct: 305  YTTLIRGYCMKQEVNEALVILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKDILEQMK 364

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
            G    IPD CTFNTL+N+HC AGN+DEA KVF+ M  L+V  DSASYSVLIRSLCQ G+ 
Sbjct: 365  GDSGAIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLQVSADSASYSVLIRSLCQIGNY 424

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
             +A  LFDEL E +ILLR  G  PL A+Y  +F+YLC +G T+KAE V RQL+ RGTQD 
Sbjct: 425  DKAEMLFDELFENEILLRSSGPKPLAASYKRIFQYLCEHGKTKKAERVLRQLMKRGTQDP 484

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
             SYKT+I+GHC+EG FE GYELL+ MLRRDF+PD + Y+ LIDG L+K  P+LA + LEK
Sbjct: 485  LSYKTVILGHCKEGAFENGYELLIWMLRRDFLPDIDIYDYLIDGFLQKDKPLLAMEALEK 544

Query: 1109 MLRSFHLAATSTFHSILDELLKK 1177
            M++S +   TST+HS+L  LL+K
Sbjct: 545  MVKSSYQPKTSTWHSVLARLLEK 567



 Score =  125 bits (315), Expect = 3e-26
 Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 7/254 (2%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTY-GVAPDTVTFNILIKGFCM 202
            +M S    P VVTYN+L+  L R G    A  L + M     G++PD VT+  LI+G+CM
Sbjct: 255  EMTSFNCDPDVVTYNTLVDGLCRAGKIKTAHNLVNGMSKKCGGLSPDVVTYTTLIRGYCM 314

Query: 203  NSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNV 382
               V+E     +EM+  G  P+++TYNTL+ GLC A+K     ++L  M K      P+ 
Sbjct: 315  KQEVNEALVILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKDILEQM-KGDSGAIPDA 373

Query: 383  VTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEG 562
             T+ TLI  +C   ++ +A  VFE M    +  +  +Y+ LI+ LC+   +DK +M+ + 
Sbjct: 374  CTFNTLINSHCCAGNLDEAFKVFENMKKLQVSADSASYSVLIRSLCQIGNYDKAEMLFDE 433

Query: 563  TLGGGKFI------PDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIR 724
                   +      P   ++  +    C  G   +A +V  +++    Q D  SY  +I 
Sbjct: 434  LFENEILLRSSGPKPLAASYKRIFQYLCEHGKTKKAERVLRQLMKRGTQ-DPLSYKTVIL 492

Query: 725  SLCQRGDLHRAVEL 766
              C+ G      EL
Sbjct: 493  GHCKEGAFENGYEL 506



 Score =  105 bits (261), Expect = 5e-20
 Identities = 82/317 (25%), Positives = 144/317 (45%), Gaps = 3/317 (0%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSL-DMNPNVVTYT 394
            + F FF  +   G   +  +Y  +++ L R + +  A N L  + K+S  ++      + 
Sbjct: 104  KAFHFFNWVHENGFSHNSQSYFIMLEILGREKNLNVARNFLFSIEKRSNGEVKLEDRFFN 163

Query: 395  TLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTLGG 574
            +LIR Y       +++ +F+ M S G+ P+ IT+N+++  L    + +  K + +  L  
Sbjct: 164  SLIRSYGEAGLFKESIKLFQTMKSIGVSPSVITFNSVLLILLRRGRTNMAKEVFDEMLST 223

Query: 575  GKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHR 754
                PDT T+N L+   C    VDE    F +M      PD  +Y+ L+  LC+ G +  
Sbjct: 224  YGVTPDTYTYNILIRGFCKNSMVDEGFHFFKEMTSFNCDPDVVTYNTLVDGLCRAGKIKT 283

Query: 755  AVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR-P 931
            A  L + +S+K       G +P V  Y  +    C      +A  +  ++  RG +    
Sbjct: 284  AHNLVNGMSKKC-----GGLSPDVVTYTTLIRGYCMKQEVNEALVILEEMNGRGLKPNIV 338

Query: 932  SYKTLIMGHCREGTFEAGYELLVLML-RRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            +Y TLI G C    ++   ++L  M      +PDA T+ +LI+     GN   A K  E 
Sbjct: 339  TYNTLIKGLCEAQKWDKMKDILEQMKGDSGAIPDACTFNTLINSHCCAGNLDEAFKVFEN 398

Query: 1109 MLRSFHLAATSTFHSIL 1159
            M +   ++A S  +S+L
Sbjct: 399  M-KKLQVSADSASYSVL 414



 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 84/399 (21%), Positives = 159/399 (39%), Gaps = 31/399 (7%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMN 205
            +M   G+ P++VTYN+L+  L         + + ++M    G  PD  TFN LI   C  
Sbjct: 327  EMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKDILEQMKGDSGAIPDACTFNTLINSHCCA 386

Query: 206  SMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVL-----RGMLKKSLDM 370
              +DE F+ F+ M +     D  +Y+ L+  LC+      A  +        +L +S   
Sbjct: 387  GNLDEAFKVFENMKKLQVSADSASYSVLIRSLCQIGNYDKAEMLFDELFENEILLRSSGP 446

Query: 371  NPNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKM 550
             P   +Y  + +  C       A  V  +++ RG + + ++Y T+I G C+   F+    
Sbjct: 447  KPLAASYKRIFQYLCEHGKTKKAERVLRQLMKRGTQ-DPLSYKTVILGHCKEGAFENGYE 505

Query: 551  ILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSL 730
            +L   L    F+PD   ++ L++          A++  +KM+    QP ++++  ++  L
Sbjct: 506  LLIWML-RRDFLPDIDIYDYLIDGFLQKDKPLLAMEALEKMVKSSYQPKTSTWHSVLARL 564

Query: 731  CQRGDLHRAVELFDELSEKQI------------LLREDGCTPLVAAYNPMF--------- 847
             ++  +H +  +   + EK I            LL + G        N +          
Sbjct: 565  LEKDCVHESASVLVAMLEKNIRQNINLSTKCLQLLFDRGLQDRAFKINELIYKNGYCVKM 624

Query: 848  ----EYLCGNGNTQKA-ETVFRQLLNRGTQDRPSYKTLIMGHCREGTFEAGYELLVLMLR 1012
                ++LC  G   +A + +   L N    D     T+I+  C+       + L   ++ 
Sbjct: 625  DEVVQFLCKRGRASEACKMLLFSLKNNHKFDIDLCNTVILDLCKINKASEAFSLCYELVE 684

Query: 1013 RDFVPDAETYESLIDGLLKKGNPVLAQKTLEKMLRSFHL 1129
            +    D      L+  L   G    A    +++ R+ HL
Sbjct: 685  KGLNHDLICINDLVAALEAGGRTAEAAFISKRIPRTEHL 723


>ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355497542|gb|AES78745.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  511 bits (1317), Expect = e-142
 Identities = 250/384 (65%), Positives = 307/384 (79%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MK IGVSP VVT+NS+L +LL+RG T+MA+ +YDEML TYGV PDT T+NILI+GFC NS
Sbjct: 181  MKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNS 240

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDEGF FFKEM+ F CDPDV+TYNTLVDGLCRA K+  AHN++ GM KK  D++P+VVT
Sbjct: 241  MVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVT 300

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTLIRGYC K ++ +AL + EEM  RGLKPN +TYNTLI+GLCEAQK+DK+K ILE   
Sbjct: 301  YTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMK 360

Query: 569  GGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDL 748
            G G  IPD CTFNTL+N+HC AGN+DEA KVF+ M  L+V  DSASYSVLIR+LCQ+GD 
Sbjct: 361  GDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDY 420

Query: 749  HRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR 928
             +A  LFDEL EK+ILL   G  PL A+Y  MF+YLC NG T+KAE V RQL+ RGTQD 
Sbjct: 421  GKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDP 480

Query: 929  PSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
             SY+ +I+GHC+EG++E GY LLV MLRRDF+PD + Y+ LIDG L+K  P+LA++TLEK
Sbjct: 481  LSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEK 540

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            ML+S +   TST+HSIL+ LL++G
Sbjct: 541  MLKSSYKPQTSTWHSILNRLLEQG 564



 Score =  125 bits (313), Expect = 5e-26
 Identities = 95/355 (26%), Positives = 158/355 (44%), Gaps = 5/355 (1%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEM-LVTYGVAPDTVTFNILIKGFCM 202
            +M S    P VVTYN+L+  L R G   +A  L + M      ++PD VT+  LI+G+C 
Sbjct: 251  EMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCR 310

Query: 203  NSMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNV 382
               VDE     +EM+  G  P+++TYNTL+ GLC A+K      +L  M K      P+ 
Sbjct: 311  KQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQM-KGDGGSIPDA 369

Query: 383  VTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEG 562
             T+ TLI  +C   ++ +A  VFE M    +  +  +Y+ LI+ LC+   + K +M+ + 
Sbjct: 370  CTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFD- 428

Query: 563  TLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLK---VQPDSASYSVLIRSLC 733
                                           ++F+K + L     +P +ASY  + + LC
Sbjct: 429  -------------------------------ELFEKEILLSSYGPKPLAASYKCMFQYLC 457

Query: 734  QRGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNR 913
            + G   +A  +  +L ++         T    +Y  +    C  G+ +    +   +L R
Sbjct: 458  ENGKTKKAERVLRQLMKRG--------TQDPLSYQIVILGHCKEGSYENGYGLLVWMLRR 509

Query: 914  G-TQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKG 1075
                D   Y  LI G  R+       E L  ML+  + P   T+ S+++ LL++G
Sbjct: 510  DFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQG 564



 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 3/324 (0%)
 Frame = +2

Query: 218  EGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSL-DMNPNVVTYT 394
            + F FF  +   G   +  TY  +++ L R + +  A N L  + K+S  ++      + 
Sbjct: 100  KAFLFFNWIHEKGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFN 159

Query: 395  TLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTLGG 574
            +LIR Y       +++ +FE M   G+ P  +T+N+++  L +  + +  K + +  L  
Sbjct: 160  SLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKT 219

Query: 575  GKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHR 754
                PDT T+N L+   C    VDE    F +M      PD  +Y+ L+  LC+ G +  
Sbjct: 220  YGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKV 279

Query: 755  AVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRGTQDR-P 931
            A  L + +S+K         +P V  Y  +    C      +A  +  ++  RG +    
Sbjct: 280  AHNLVNGMSKKC-----KDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIV 334

Query: 932  SYKTLIMGHCREGTFEAGYELLVLML-RRDFVPDAETYESLIDGLLKKGNPVLAQKTLEK 1108
            +Y TLI G C    ++   E+L  M      +PDA T+ +LI+     GN   A K  E 
Sbjct: 335  TYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFEN 394

Query: 1109 MLRSFHLAATSTFHSILDELLKKG 1180
            M +    A ++++  ++  L +KG
Sbjct: 395  MKKLEVSADSASYSVLIRTLCQKG 418



 Score = 84.3 bits (207), Expect = 9e-14
 Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 5/261 (1%)
 Frame = +2

Query: 26   KMKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMN 205
            +M   G+ P++VTYN+L+  L         + + ++M    G  PD  TFN LI   C  
Sbjct: 323  EMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCA 382

Query: 206  SMVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMN---- 373
              +DE F+ F+ M +     D  +Y+ L+  LC+      A  +   + +K + ++    
Sbjct: 383  GNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGP 442

Query: 374  -PNVVTYTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKM 550
             P   +Y  + +  C       A  V  +++ RG + + ++Y  +I G C+   ++    
Sbjct: 443  KPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQ-DPLSYQIVILGHCKEGSYENGYG 501

Query: 551  ILEGTLGGGKFIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSL 730
            +L   L    F+PD   ++ L++          A +  +KML    +P ++++  ++  L
Sbjct: 502  LLVWML-RRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRL 560

Query: 731  CQRGDLHRAVELFDELSEKQI 793
             ++G +H +  +   + E+ I
Sbjct: 561  LEQGCVHESAGVIVMMLERNI 581


>ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|193806399|sp|O81908.2|PPR2_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g02060, chloroplastic; Flags: Precursor
            gi|332189251|gb|AEE27372.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  510 bits (1314), Expect = e-142
 Identities = 249/387 (64%), Positives = 307/387 (79%), Gaps = 4/387 (1%)
 Frame = +2

Query: 29   MKSIGVSPSVVTYNSLLSILLRRGWTSMARRLYDEMLVTYGVAPDTVTFNILIKGFCMNS 208
            MK +G+SPSV+T+NSLLSILL+RG T MA  L+DEM  TYGV PD+ TFN LI GFC NS
Sbjct: 164  MKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNS 223

Query: 209  MVDEGFQFFKEMSRFGCDPDVITYNTLVDGLCRARKVTTAHNVLRGMLKKSLDMNPNVVT 388
            MVDE F+ FK+M  + C+PDV+TYNT++DGLCRA KV  AHNVL GMLKK+ D++PNVV+
Sbjct: 224  MVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVS 283

Query: 389  YTTLIRGYCMKHDIADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMILEGTL 568
            YTTL+RGYCMK +I +A++VF +M+SRGLKPN +TYNTLI+GL EA ++D++K IL   +
Sbjct: 284  YTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL---I 340

Query: 569  GGGK----FIPDTCTFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQ 736
            GG      F PD CTFN L+ AHC AG++D A+KVF +ML++K+ PDSASYSVLIR+LC 
Sbjct: 341  GGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCM 400

Query: 737  RGDLHRAVELFDELSEKQILLREDGCTPLVAAYNPMFEYLCGNGNTQKAETVFRQLLNRG 916
            R +  RA  LF+EL EK++LL +D C PL AAYNPMFEYLC NG T++AE VFRQL+ RG
Sbjct: 401  RNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG 460

Query: 917  TQDRPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETYESLIDGLLKKGNPVLAQK 1096
             QD PSYKTLI GHCREG F+  YELLVLMLRR+FVPD ETYE LIDGLLK G  +LA  
Sbjct: 461  VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHD 520

Query: 1097 TLEKMLRSFHLAATSTFHSILDELLKK 1177
            TL++MLRS +L   +TFHS+L EL K+
Sbjct: 521  TLQRMLRSSYLPVATTFHSVLAELAKR 547



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 54/307 (17%)
 Frame = +2

Query: 305  RARKVTTAHNVLRGMLKKSL----DMNP---------------NVVTYTTLIRGYCMKHD 427
            RA KVT      +  L +SL    + NP                 ++ TT+++   +   
Sbjct: 21   RAAKVTNEERSTKSKLARSLARAVNSNPWSDELESSLSSLHPSQTISRTTVLQTLRLIKV 80

Query: 428  IADALVVFEEMVSRGLKPNRITYNTLIQGLCEAQKFDKVKMIL---EGTLGGGKFIPDTC 598
             AD L  F+ + ++G      ++  +++ L  A+  +  +  L   E    G   + D  
Sbjct: 81   PADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRY 140

Query: 599  TFNTLMNAHCIAGNVDEALKVFDKMLDLKVQPDSASYSVLIRSLCQRGDLHRAVELFDEL 778
             FN+L+ ++  AG   E++K+F  M  + + P   +++ L+  L +RG    A +LFDE+
Sbjct: 141  -FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM 199

Query: 779  SE-------------------KQILLRED----------GCTPLVAAYNPMFEYLCGNGN 871
                                 K  ++ E            C P V  YN + + LC  G 
Sbjct: 200  RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGK 259

Query: 872  TQKAETVFRQLLNRGTQDRP---SYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAETY 1042
             + A  V   +L + T   P   SY TL+ G+C +   +    +   ML R   P+A TY
Sbjct: 260  VKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTY 319

Query: 1043 ESLIDGL 1063
             +LI GL
Sbjct: 320  NTLIKGL 326


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