BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00038369
         (956 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci...   288   2e-75
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr...   287   4e-75
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   280   5e-73
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              280   5e-73
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr...   277   5e-72
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   276   7e-72
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso...   269   1e-69
ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1...   268   2e-69
ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, part...   268   2e-69
gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]             263   1e-67
ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like iso...   263   1e-67
ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso...   261   4e-67
ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arab...   260   6e-67
ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform ...   259   1e-66
ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform ...   259   1e-66
ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Caps...   259   1e-66
ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidop...   256   7e-66
dbj|BAD43030.1| putative double strand break repair protein (XRC...   256   7e-66
gb|EYU32990.1| hypothetical protein MIMGU_mgv1a012190mg [Mimulus...   253   1e-64
dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         252   1e-64

>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
          Length = 256

 Score =  288 bits (737), Expect = 2e-75
 Identities = 150/256 (58%), Positives = 178/256 (69%), Gaps = 9/256 (3%)
 Frame = +1

Query: 49  RHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQP 228
           RHTCLK+E+S  +   +PIF+KGTW+ T FDL+IT+G++ W+CNASE+QV++RA+QWDQP
Sbjct: 4   RHTCLKLEISDAT---DPIFVKGTWFETHFDLSITDGLNVWLCNASEEQVKDRAAQWDQP 60

Query: 229 VSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSIT 408
           V+EY++LAERYLGFQQ  SVYGF D  DG KRLSWTFEKEGTKLEWRWKC  +PNSK +T
Sbjct: 61  VTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAPNSKKVT 120

Query: 409 TGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXXLGV 588
            GI+DFLMDANIRLS+EVV KTQSFE+LKVEAEKCL                     LGV
Sbjct: 121 AGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFNNEKLEFESAIYAKFLGV 180

Query: 589 LNXXXXXXXXXXXXXXXTAGKRPV-EEEEVSTDKTESYDETSGDEKSEEETTKRPTGTS- 762
           LN                A    + +EEE STDKTES+DE S D+KSEEE  K  T TS 
Sbjct: 181 LNSKKSKLRELRDKLSKQAVMGDLQQEEEQSTDKTESFDEGSDDDKSEEEPAKAITSTSK 240

Query: 763 -------RGQKRISCK 789
                  RG+KRIS K
Sbjct: 241 GVPASRARGRKRISRK 256


>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
           gi|557522035|gb|ESR33402.1| hypothetical protein
           CICLE_v10005690mg [Citrus clementina]
          Length = 256

 Score =  287 bits (735), Expect = 4e-75
 Identities = 148/259 (57%), Positives = 178/259 (68%), Gaps = 8/259 (3%)
 Frame = +1

Query: 37  VDTPRHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQ 216
           ++   HTCLK+E+   +   +PIF+KGTW+ T FDL+IT+G++AW+CNASE+QV++RA+ 
Sbjct: 1   MEATSHTCLKLEIPDAT---DPIFVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAL 57

Query: 217 WDQPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNS 396
           WDQPV+EYV+LAERYLGFQQ  SVYGF D  DG KRLSWTFEKEGTKLEWRWKC  +PNS
Sbjct: 58  WDQPVTEYVKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAPNS 117

Query: 397 KSITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXX 576
           K +T GI+DFLMDANIRLS+EVV KTQSFE+LKVEAEKCL                    
Sbjct: 118 KKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAIYAK 177

Query: 577 XLGVLNXXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRPTG 756
            LGVLN                A    +++EE STDKTES+DE S D+KSEEE  K  T 
Sbjct: 178 FLGVLNSKKSKLRELRDKLSKQAVMGDLQQEEQSTDKTESFDEGSDDDKSEEEPAKDITS 237

Query: 757 TS--------RGQKRISCK 789
           TS        RG+KRIS K
Sbjct: 238 TSKGVPASRARGRKRISRK 256


>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  280 bits (717), Expect = 5e-73
 Identities = 147/257 (57%), Positives = 179/257 (69%), Gaps = 10/257 (3%)
 Frame = +1

Query: 43  TPRHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWD 222
           TPRH+CLK+++  +S   EPIFIK TW+ + F L+IT+G+ AW+CNASED+V ERA+QWD
Sbjct: 4   TPRHSCLKLQIPNQS---EPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60

Query: 223 QPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKS 402
           QPVS+Y+ LAER+LGFQQ  SVYGF D GDG +RLSWTFEKEGTKLEWRWKC LSP+S+S
Sbjct: 61  QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS 120

Query: 403 ITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXXL 582
            T G++DFLM+ANIRLSEEVV KTQSFE+LKVEAEKCL                     L
Sbjct: 121 TTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFL 180

Query: 583 GVLN--XXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRPTG 756
           GVLN                 T GK P EE+E STDKT S+D+ S +E  EEE++K  TG
Sbjct: 181 GVLNSKKAKLRELRDQISKEETTGKLPQEEDE-STDKTLSFDDESDNEAIEEESSKNLTG 239

Query: 757 TS--------RGQKRIS 783
           TS        RG+KR++
Sbjct: 240 TSKHVSTSRPRGRKRVA 256


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  280 bits (717), Expect = 5e-73
 Identities = 147/257 (57%), Positives = 179/257 (69%), Gaps = 10/257 (3%)
 Frame = +1

Query: 43  TPRHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWD 222
           TPRH+CLK+++  +S   EPIFIK TW+ + F L+IT+G+ AW+CNASED+V ERA+QWD
Sbjct: 4   TPRHSCLKLQIPNQS---EPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60

Query: 223 QPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKS 402
           QPVS+Y+ LAER+LGFQQ  SVYGF D GDG +RLSWTFEKEGTKLEWRWKC LSP+S+S
Sbjct: 61  QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS 120

Query: 403 ITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXXL 582
            T G++DFLM+ANIRLSEEVV KTQSFE+LKVEAEKCL                     L
Sbjct: 121 TTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFL 180

Query: 583 GVLN--XXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRPTG 756
           GVLN                 T GK P EE+E STDKT S+D+ S +E  EEE++K  TG
Sbjct: 181 GVLNSKKAKLRELRDQISKEETTGKLPQEEDE-STDKTLSFDDESDNEAIEEESSKNLTG 239

Query: 757 TS--------RGQKRIS 783
           TS        RG+KR++
Sbjct: 240 TSKHVSTSRPRGRKRVA 256


>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
           gi|557522040|gb|ESR33407.1| hypothetical protein
           CICLE_v10005689mg [Citrus clementina]
          Length = 256

 Score =  277 bits (708), Expect = 5e-72
 Identities = 146/256 (57%), Positives = 175/256 (68%), Gaps = 9/256 (3%)
 Frame = +1

Query: 49  RHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQP 228
           RHTCLK+E+   +   +PIF KGTW+ T FDL+IT+G++AW+CNASE+QV++RA+QWDQP
Sbjct: 4   RHTCLKLEIPDAT---DPIFAKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWDQP 60

Query: 229 VSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSIT 408
           V+EY++LAERYLGFQQ  SVYGF D  DG KRLSWTFEKEGTKLEWRWK   +PNSK +T
Sbjct: 61  VTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKFGPAPNSKKVT 120

Query: 409 TGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXXLGV 588
            GI+DFLMDANIRLS+EVV KTQSFE+LKVE +KCL                     LGV
Sbjct: 121 AGILDFLMDANIRLSDEVVTKTQSFERLKVETQKCLAQSERFKNEKVEFESAIYSKFLGV 180

Query: 589 LNXXXXXXXXXXXXXXXTAGKRPV-EEEEVSTDKTESYDETSGDEKSEEETTKRPTGTS- 762
           LN                A    + +EEE STDKTES+D  S D+KSEE+ TK  T TS 
Sbjct: 181 LNSKKSKLRELRDKLSKQAVMGDLQQEEEESTDKTESFDGGSDDDKSEEQPTKDITSTSI 240

Query: 763 -------RGQKRISCK 789
                  RG+KRIS K
Sbjct: 241 GVPASRARGRKRISRK 256


>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score =  276 bits (707), Expect = 7e-72
 Identities = 145/261 (55%), Positives = 177/261 (67%), Gaps = 11/261 (4%)
 Frame = +1

Query: 40  DTPRHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQW 219
           +T RHTCLK+E++      EPIF+KGTW+ + F L+IT+G++AW+CNA+E QV+ERA+QW
Sbjct: 11  ETARHTCLKLEIT------EPIFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAAQW 64

Query: 220 DQPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSK 399
           DQPVSEY+ LAE YLGFQQ  S+Y F D GD  KRLSWTFEKEGTKLEWRWKC+ SP++K
Sbjct: 65  DQPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPDNK 124

Query: 400 SITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXX 579
             T GI+DFLMDANIRLSEEVV+KT SFE+LK EA+KCL                     
Sbjct: 125 MTTAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQSERFAGEKTEFESSIYAKF 184

Query: 580 LGVLN--XXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDETSGD-EKSEEETTKRP 750
           L VLN                  +GK P EEEE STDKTES++E S D +KSEEE  ++ 
Sbjct: 185 LAVLNSKKRKLRQLRDQLSKKEASGKLPQEEEEESTDKTESFEEDSSDGDKSEEEPPEKV 244

Query: 751 TGTS--------RGQKRISCK 789
           TGTS        RG+KRI+ K
Sbjct: 245 TGTSEDKPSSRGRGRKRITRK 265


>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
           tuberosum]
          Length = 267

 Score =  269 bits (687), Expect = 1e-69
 Identities = 137/242 (56%), Positives = 166/242 (68%), Gaps = 2/242 (0%)
 Frame = +1

Query: 43  TPRHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWD 222
           +P+HTCLK+ +S K    E IF+KGTW+S+ FDL IT+G+ +W C+ASE++VEERASQWD
Sbjct: 5   SPKHTCLKLVISNK----EQIFVKGTWFSSHFDLFITDGLQSWTCHASEEEVEERASQWD 60

Query: 223 QPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKS 402
           QPVSEY++LAE+YLGFQQ  S YGF D G G KRLSWTFEKEGTKLEWRWKC+ S NSK 
Sbjct: 61  QPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQPSSNSKK 120

Query: 403 ITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXXL 582
            T  I+DFLMDANIRLS+EVV KT+SFE++KVEAEKCL                     L
Sbjct: 121 TTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSREKEEFESAIYAKFL 180

Query: 583 GVLN--XXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRPTG 756
           GVLN                 TA + PVEE+  STD+T+++DE S +E S EE  K   G
Sbjct: 181 GVLNSKKKKLRELRDKLSKQGTAVEEPVEEDAQSTDRTKTFDEGSDEEMSGEEVEKEDVG 240

Query: 757 TS 762
           TS
Sbjct: 241 TS 242


>ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao]
           gi|508714033|gb|EOY05930.1| DNA repair protein XRCC4,
           putative isoform 1 [Theobroma cacao]
          Length = 263

 Score =  268 bits (686), Expect = 2e-69
 Identities = 146/261 (55%), Positives = 170/261 (65%), Gaps = 12/261 (4%)
 Frame = +1

Query: 43  TPRHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWD 222
           T RHTCLK+E+ +     EPIF+KGTW+   FD++IT+G+ AW+CNA+E++V+ERA+QWD
Sbjct: 8   TTRHTCLKLEIPST----EPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERAAQWD 63

Query: 223 QPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKS 402
           QPV+EY+ELAERYLGFQQ  SVY F D GD  KRLSW FEKEGTKLEWRWK R SP+S+ 
Sbjct: 64  QPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSPDSQK 123

Query: 403 ITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXXL 582
           IT GI+DFLMDANIRLSEEV RKTQSFEKLKVEAEKCL                     L
Sbjct: 124 ITGGILDFLMDANIRLSEEVFRKTQSFEKLKVEAEKCLEQSERSTNEKMEFESEIYAKFL 183

Query: 583 GVLN--XXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRPT- 753
           GVLN                 T GK  +EEE+ STDKTESY   S  E  EEE  K  T 
Sbjct: 184 GVLNSKKAKLRELRDQLSKQETTGKALMEEED-STDKTESYHTGSDAEGGEEEPEKNLTS 242

Query: 754 ---------GTSRGQKRISCK 789
                    G  RG+KR + K
Sbjct: 243 TCKDVPAAAGRGRGRKRATRK 263


>ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina]
           gi|557522045|gb|ESR33412.1| hypothetical protein
           CICLE_v10007171mg, partial [Citrus clementina]
          Length = 243

 Score =  268 bits (685), Expect = 2e-69
 Identities = 140/237 (59%), Positives = 164/237 (69%), Gaps = 9/237 (3%)
 Frame = +1

Query: 106 FIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQPVSEYVELAERYLGFQQFDS 285
           ++KGTW+ T FDL+IT+G++AW+CNASE+QV++RA+QWDQPV+EYV+LAERYLGFQQ  S
Sbjct: 7   YVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWDQPVTEYVKLAERYLGFQQPGS 66

Query: 286 VYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSITTGIMDFLMDANIRLSEEVV 465
           VY F D  DG KRLSWTFEKEGTKLEWRWKC  +PNSK +T GI+DFLMDANIRLS+EVV
Sbjct: 67  VYAFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAPNSKKVTAGILDFLMDANIRLSDEVV 126

Query: 466 RKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXXLGVLNXXXXXXXXXXXXXXXTA 645
            KTQSFE+LKVEAEKCL                     LGVLN                A
Sbjct: 127 TKTQSFERLKVEAEKCLAQSERFKNEKLEFESAVYAKFLGVLNSKKSKLRELRDKLSKQA 186

Query: 646 GKRPV-EEEEVSTDKTESYDETSGDEKSEEETTKRPTGTS--------RGQKRISCK 789
               + +EEE STDKTES+DE S D+KSEEE  K  T TS        RG+KRIS K
Sbjct: 187 VMGDLQQEEEQSTDKTESFDEGSDDDKSEEEPAKDITSTSKGVPASRARGRKRISRK 243


>gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]
          Length = 257

 Score =  263 bits (671), Expect = 1e-67
 Identities = 136/246 (55%), Positives = 166/246 (67%), Gaps = 3/246 (1%)
 Frame = +1

Query: 40  DTPRHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQW 219
           ++ RHTCLK+E        +PIF+  TW+ + F+L++T+G  AWIC+ASE++V +RA+QW
Sbjct: 3   ESKRHTCLKLE----PKDSDPIFVNATWFPSHFNLSVTDGHHAWICHASEEEVRDRAAQW 58

Query: 220 DQPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSK 399
           DQPV EYV LAERYLGFQQ DSVY F D GDG KRLSWTFEKEGTKL+WRWKC+ +P+SK
Sbjct: 59  DQPVPEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFEKEGTKLQWRWKCQPAPDSK 118

Query: 400 SITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXX 579
             T   +DFLMDANIRLSEEVV K+QSFE+LKVEAEKCL                     
Sbjct: 119 KTTAETLDFLMDANIRLSEEVVIKSQSFERLKVEAEKCLEQSEKISNEKMEFESTLYAKF 178

Query: 580 LGVLN---XXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRP 750
           LGVLN                   AGK P  +EE STDKTES+D+ S D K EEE+++  
Sbjct: 179 LGVLNSKKAKLRELRAQLEKNDPAAGKLP--QEEGSTDKTESFDDGSDDGKGEEESSENV 236

Query: 751 TGTSRG 768
           TGTS+G
Sbjct: 237 TGTSKG 242


>ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Fragaria vesca
           subsp. vesca]
          Length = 259

 Score =  263 bits (671), Expect = 1e-67
 Identities = 137/242 (56%), Positives = 163/242 (67%), Gaps = 2/242 (0%)
 Frame = +1

Query: 46  PRHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQ 225
           PR +CLK+E      + +PIF+KGTW+ +RFDL+IT+G++AW+C+ASED V +RA+QWDQ
Sbjct: 9   PRQSCLKLE----PKESQPIFVKGTWFHSRFDLSITDGLNAWVCHASEDAVRDRAAQWDQ 64

Query: 226 PVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSI 405
           PV +YV LAERYLGFQ  DSVY F D GDG KRLSWTF+KEGTKLEWRWKC  SPNSK  
Sbjct: 65  PVPDYVSLAERYLGFQHPDSVYKFTDAGDGHKRLSWTFDKEGTKLEWRWKCEPSPNSKET 124

Query: 406 TTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXXLG 585
           T  ++DFLMDAN+ LSEEVVRKTQSFE+LKVEAE CL                     LG
Sbjct: 125 TAAVLDFLMDANVGLSEEVVRKTQSFERLKVEAEMCLIQSERIANEKIEFESAVYAKFLG 184

Query: 586 VLN--XXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRPTGT 759
           VLN                  AGK P E+EE STDKTE+Y   S DE SE ++ K P  T
Sbjct: 185 VLNSKKTKLRELRDKLSKQEAAGKLP-EQEEESTDKTETY--VSDDENSEVDSLKDPPPT 241

Query: 760 SR 765
           S+
Sbjct: 242 SK 243


>ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum
           lycopersicum]
          Length = 254

 Score =  261 bits (666), Expect = 4e-67
 Identities = 136/243 (55%), Positives = 165/243 (67%), Gaps = 2/243 (0%)
 Frame = +1

Query: 43  TPRHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWD 222
           +P+HTCLK+ +S K    E IF+KGTW+S+ FDL IT+G+ +W C+ASE++VEERASQWD
Sbjct: 5   SPKHTCLKLVISNK----EQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERASQWD 60

Query: 223 QPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKS 402
           QPVSEY++L E+YLGFQQ  SVYGF D G G KRLSWTFEKEGTKLEWRWKC+ S NSK 
Sbjct: 61  QPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQSSSNSKK 120

Query: 403 ITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXXL 582
            T  I+DFLMDANIRLS+EVV KT+SFE++KVEAEKCL                     L
Sbjct: 121 TTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSKEKEEFESAIYAKFL 180

Query: 583 GVLN--XXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRPTG 756
           GVLN                 T+ + PVEE+  STD+TE++DE    E S EE  K   G
Sbjct: 181 GVLNAKKKKLRELRDKLSKQATSVEEPVEEDAQSTDRTETFDE----EISGEEVEKDDVG 236

Query: 757 TSR 765
           TS+
Sbjct: 237 TSK 239


>ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arabidopsis lyrata subsp.
           lyrata] gi|297329239|gb|EFH59658.1| hypothetical protein
           ARALYDRAFT_479818 [Arabidopsis lyrata subsp. lyrata]
          Length = 248

 Score =  260 bits (664), Expect = 6e-67
 Identities = 136/245 (55%), Positives = 174/245 (71%), Gaps = 2/245 (0%)
 Frame = +1

Query: 49  RHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQP 228
           +HTCL++E+S      +PIF+KGTW+++ FD+++T+G  +WICNA+E++V ERA+QWDQP
Sbjct: 8   KHTCLRLEISGA----DPIFVKGTWHNSHFDISVTDGSSSWICNATEEEVAERAAQWDQP 63

Query: 229 VSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSIT 408
           VSEY+ELAERYLGFQQ +SVYGF D  +GSKRLSWTFEKEGTKLEWRWKC+ S +SK IT
Sbjct: 64  VSEYLELAERYLGFQQPNSVYGFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSHDSKKIT 123

Query: 409 TGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXXLGV 588
            GI+DFL++ANIRLSEEVV KT+SFEK+K EAE+CL                     L V
Sbjct: 124 VGILDFLLEANIRLSEEVVNKTRSFEKMKCEAERCLAQGEKLCEEKTEFENATYAKFLSV 183

Query: 589 LNXXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDE-TSGDEKSEEETTKRPTGT-S 762
           LN                   R VEEEE STDKTES+D   S +E+SEEE +K+ + + +
Sbjct: 184 LNAKKAKLRALRDKGDSV---RAVEEEE-STDKTESFDSGRSDNEQSEEEASKKASSSKA 239

Query: 763 RGQKR 777
           RG+KR
Sbjct: 240 RGRKR 244


>ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Theobroma cacao]
           gi|508714034|gb|EOY05931.1| DNA ligase iv-binding
           protein XRCC4 isoform 2 [Theobroma cacao]
          Length = 276

 Score =  259 bits (662), Expect = 1e-66
 Identities = 146/274 (53%), Positives = 170/274 (62%), Gaps = 25/274 (9%)
 Frame = +1

Query: 43  TPRHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWD 222
           T RHTCLK+E+ +     EPIF+KGTW+   FD++IT+G+ AW+CNA+E++V+ERA+QWD
Sbjct: 8   TTRHTCLKLEIPST----EPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERAAQWD 63

Query: 223 QPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKS 402
           QPV+EY+ELAERYLGFQQ  SVY F D GD  KRLSW FEKEGTKLEWRWK R SP+S+ 
Sbjct: 64  QPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSPDSQK 123

Query: 403 ITTGIMDFLMDANIRLS-------------EEVVRKTQSFEKLKVEAEKCLXXXXXXXXX 543
           IT GI+DFLMDANIRLS             EEV RKTQSFEKLKVEAEKCL         
Sbjct: 124 ITGGILDFLMDANIRLSHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKCLEQSERSTNE 183

Query: 544 XXXXXXXXXXXXLGVLN--XXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDETSGD 717
                       LGVLN                 T GK  +EEE+ STDKTESY   S  
Sbjct: 184 KMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEED-STDKTESYHTGSDA 242

Query: 718 EKSEEETTKRPT----------GTSRGQKRISCK 789
           E  EEE  K  T          G  RG+KR + K
Sbjct: 243 EGGEEEPEKNLTSTCKDVPAAAGRGRGRKRATRK 276


>ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Theobroma cacao]
           gi|508714035|gb|EOY05932.1| DNA ligase iv-binding
           protein XRCC4 isoform 3 [Theobroma cacao]
          Length = 277

 Score =  259 bits (661), Expect = 1e-66
 Identities = 146/275 (53%), Positives = 170/275 (61%), Gaps = 26/275 (9%)
 Frame = +1

Query: 43  TPRHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWD 222
           T RHTCLK+E+ +     EPIF+KGTW+   FD++IT+G+ AW+CNA+E++V+ERA+QWD
Sbjct: 8   TTRHTCLKLEIPST----EPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERAAQWD 63

Query: 223 QPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKS 402
           QPV+EY+ELAERYLGFQQ  SVY F D GD  KRLSW FEKEGTKLEWRWK R SP+S+ 
Sbjct: 64  QPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSPDSQK 123

Query: 403 ITTGIMDFLMDANIRLS--------------EEVVRKTQSFEKLKVEAEKCLXXXXXXXX 540
           IT GI+DFLMDANIRLS              EEV RKTQSFEKLKVEAEKCL        
Sbjct: 124 ITGGILDFLMDANIRLSKHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKCLEQSERSTN 183

Query: 541 XXXXXXXXXXXXXLGVLN--XXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDETSG 714
                        LGVLN                 T GK  +EEE+ STDKTESY   S 
Sbjct: 184 EKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEED-STDKTESYHTGSD 242

Query: 715 DEKSEEETTKRPT----------GTSRGQKRISCK 789
            E  EEE  K  T          G  RG+KR + K
Sbjct: 243 AEGGEEEPEKNLTSTCKDVPAAAGRGRGRKRATRK 277


>ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Capsella rubella]
           gi|482567111|gb|EOA31300.1| hypothetical protein
           CARUB_v10014474mg [Capsella rubella]
          Length = 249

 Score =  259 bits (661), Expect = 1e-66
 Identities = 137/246 (55%), Positives = 174/246 (70%), Gaps = 3/246 (1%)
 Frame = +1

Query: 49  RHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQP 228
           +HTCL++E+S      +PIF+KGTWY +RFD+++T+G  +WICNA+E++V ERA+QWDQP
Sbjct: 8   KHTCLRLEISGA----DPIFVKGTWYHSRFDISVTDGSSSWICNATEEEVAERAAQWDQP 63

Query: 229 VSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSIT 408
           VSEY+ELAE+YLGFQQ DS+YGF D  +G KRLSWTFEKEGTKLEWRWKC+ S +SK IT
Sbjct: 64  VSEYLELAEQYLGFQQPDSIYGFSDALEGCKRLSWTFEKEGTKLEWRWKCKPSHDSKKIT 123

Query: 409 TGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXXLGV 588
            G++DFLM++NIRLSEEVV KT+SFEK+K EAEKCL                     L V
Sbjct: 124 VGVLDFLMESNIRLSEEVVNKTRSFEKMKSEAEKCLAQGQKLCKEKTEFEDATYAKFLSV 183

Query: 589 LNXXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYD--ETSGDEKSEEETTKRPTGT- 759
           LN                +GK  VEEEE STDKTES+D  E S +E+ EE  +K+ T + 
Sbjct: 184 LN--AKKAKLRALRDKEDSGK-AVEEEE-STDKTESFDDSERSDNEQGEEVDSKKATSSK 239

Query: 760 SRGQKR 777
           +RG+KR
Sbjct: 240 ARGRKR 245


>ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidopsis thaliana]
           gi|238479872|ref|NP_001154639.1| DNA repair protein
           XRCC4-like protein [Arabidopsis thaliana]
           gi|85701292|sp|Q682V0.2|XRCC4_ARATH RecName: Full=DNA
           repair protein XRCC4 gi|9800643|gb|AAF91285.2|AF233528_1
           putative double strand break repair protein [Arabidopsis
           thaliana] gi|9294200|dbj|BAB02102.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332643196|gb|AEE76717.1| DNA repair protein
           XRCC4-like protein [Arabidopsis thaliana]
           gi|332643197|gb|AEE76718.1| DNA repair protein
           XRCC4-like protein [Arabidopsis thaliana]
          Length = 264

 Score =  256 bits (655), Expect = 7e-66
 Identities = 135/245 (55%), Positives = 172/245 (70%), Gaps = 2/245 (0%)
 Frame = +1

Query: 49  RHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQP 228
           +HTCL++E+S      +PIF+KGTW+++RFD+++T+G  +WICNA+E++V ERA+QWDQP
Sbjct: 24  KHTCLRLEISGA----DPIFVKGTWHNSRFDISVTDGSSSWICNATEEEVAERAAQWDQP 79

Query: 229 VSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSIT 408
           VSEY++LAE+YLGFQQ +SVY F D  +GSKRLSWTFEKEGTKLEWRWKC+ S +SK IT
Sbjct: 80  VSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSDDSKKIT 139

Query: 409 TGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXXLGV 588
            GI+DFLM+ANIRLSEEVV KT+SFEK++ EAE+CL                     L V
Sbjct: 140 VGILDFLMEANIRLSEEVVNKTRSFEKMRSEAERCLAQGEKLCDEKTEFESATYAKFLSV 199

Query: 589 LNXXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDE-TSGDEKSEEETTKRPTGT-S 762
           LN                   R VEEEE STDK ES++   S DEKSEEE +K+ T + +
Sbjct: 200 LNAKKAKLRALRDKEDSV---RVVEEEE-STDKAESFESGRSDDEKSEEEASKKATSSKA 255

Query: 763 RGQKR 777
           RG KR
Sbjct: 256 RGGKR 260


>dbj|BAD43030.1| putative double strand break repair protein (XRCC4) [Arabidopsis
           thaliana] gi|56461768|gb|AAV91340.1| At1g61410
           [Arabidopsis thaliana] gi|61656135|gb|AAX49370.1|
           At1g61410 [Arabidopsis thaliana]
          Length = 248

 Score =  256 bits (655), Expect = 7e-66
 Identities = 135/245 (55%), Positives = 172/245 (70%), Gaps = 2/245 (0%)
 Frame = +1

Query: 49  RHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQP 228
           +HTCL++E+S      +PIF+KGTW+++RFD+++T+G  +WICNA+E++V ERA+QWDQP
Sbjct: 8   KHTCLRLEISGA----DPIFVKGTWHNSRFDISVTDGSSSWICNATEEEVAERAAQWDQP 63

Query: 229 VSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSIT 408
           VSEY++LAE+YLGFQQ +SVY F D  +GSKRLSWTFEKEGTKLEWRWKC+ S +SK IT
Sbjct: 64  VSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSDDSKKIT 123

Query: 409 TGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXXLGV 588
            GI+DFLM+ANIRLSEEVV KT+SFEK++ EAE+CL                     L V
Sbjct: 124 VGILDFLMEANIRLSEEVVNKTRSFEKMRSEAERCLAQGEKLCDEKTEFESATYAKFLSV 183

Query: 589 LNXXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDE-TSGDEKSEEETTKRPTGT-S 762
           LN                   R VEEEE STDK ES++   S DEKSEEE +K+ T + +
Sbjct: 184 LNAKKAKLRALRDKEDSV---RVVEEEE-STDKAESFESGRSDDEKSEEEASKKATSSKA 239

Query: 763 RGQKR 777
           RG KR
Sbjct: 240 RGGKR 244


>gb|EYU32990.1| hypothetical protein MIMGU_mgv1a012190mg [Mimulus guttatus]
          Length = 259

 Score =  253 bits (645), Expect = 1e-64
 Identities = 131/258 (50%), Positives = 166/258 (64%), Gaps = 11/258 (4%)
 Frame = +1

Query: 37  VDTPRHTCLKIEVSTKSSQ-PEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERAS 213
           +DTPRHTCLK+++        EP+F+KGTW+ TRFDL+IT+G+ AW C+A+E++V+ERAS
Sbjct: 1   MDTPRHTCLKLDIRVAGGGVAEPVFVKGTWHPTRFDLSITDGLHAWNCHATEEEVKERAS 60

Query: 214 QWDQPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPN 393
            WDQ VS+Y++LAERYLGFQQ  SVYGF D G+GSKRLSWTFEKEGTKLEWRWKC+ S +
Sbjct: 61  SWDQTVSDYLDLAERYLGFQQSGSVYGFSDAGNGSKRLSWTFEKEGTKLEWRWKCQPSSD 120

Query: 394 SKSITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXX 573
            K  T  ++DFLMDANIRLSEEVV K QSF+ LK+EAEKCL                   
Sbjct: 121 CKKTTAQVLDFLMDANIRLSEEVVWKMQSFDTLKLEAEKCLAQSEKLSSEKSEFESEIYG 180

Query: 574 XXLGVLN--XXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDETSGDEKSE------ 729
             + VLN                 T    P +EE+ STDKTES+DE + D++ +      
Sbjct: 181 KFVNVLNTKKAKLRELRDRLSKQGTTHHLPEDEEDQSTDKTESFDEGTDDDEDDRGKNIL 240

Query: 730 --EETTKRPTGTSRGQKR 777
              +   R     RG+KR
Sbjct: 241 DSSKDATRSASKPRGRKR 258


>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  252 bits (644), Expect = 1e-64
 Identities = 129/239 (53%), Positives = 160/239 (66%)
 Frame = +1

Query: 49  RHTCLKIEVSTKSSQPEPIFIKGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQP 228
           RHTCLK+E+      PEPIFIKGTW+   F+L+IT+G+++W CNA+E++V  RA+QWDQP
Sbjct: 7   RHTCLKLEI------PEPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRGRAAQWDQP 60

Query: 229 VSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSIT 408
           VS Y++LAE++LGFQ   SVY F D G+G+KRLSWTFEKEGTKLEWRWKC+ SP++K  T
Sbjct: 61  VSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTKKTT 120

Query: 409 TGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXXLGV 588
           T I+DFLMDANIRLSEEVVRKTQSFE+LK EAEKCL                     LGV
Sbjct: 121 TLILDFLMDANIRLSEEVVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAAVYAKFLGV 180

Query: 589 LNXXXXXXXXXXXXXXXTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRPTGTSR 765
           LN                       +E   +DKTES+D  S DEKS E+  ++  GTS+
Sbjct: 181 LNSKKRKLRELRDQLSKKEISGESAQEGEDSDKTESFDRGSDDEKSVEKPREKLAGTSK 239