BLASTX nr result
ID: Paeonia25_contig00038207
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00038207
(317 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR67407.1| integrase [Cucumis melo subsp. melo] 72 1e-19
emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera] 68 3e-19
gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halle... 65 4e-19
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus] 64 7e-19
gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halle... 62 7e-19
gb|AGH20666.1| reverse transcriptase, partial [Arabis hirsuta] 65 9e-19
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle... 62 1e-18
gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus] 63 2e-18
emb|CAN69241.1| hypothetical protein VITISV_009386 [Vitis vinifera] 67 2e-18
gb|AGH20672.1| reverse transcriptase, partial [Thlaspi arvense] 63 3e-18
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera] 65 3e-18
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 62 4e-18
emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera] 64 4e-18
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera] 67 4e-18
emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera] 64 4e-18
gb|AGH20668.1| reverse transcriptase, partial [Arabis hirsuta] 63 4e-18
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle... 62 4e-18
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle... 62 4e-18
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle... 62 4e-18
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle... 62 4e-18
>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
Length = 1281
Score = 72.0 bits (175), Expect(2) = 1e-19
Identities = 36/64 (56%), Positives = 48/64 (75%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VY+TKL S+G V+ YKARLVV YK +YGVDYE + ET+RL+L++AAQ G +VH
Sbjct: 846 VYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQNGWKVH 905
Query: 136 QIDV 125
Q+D+
Sbjct: 906 QMDI 909
Score = 49.7 bits (117), Expect(2) = 1e-19
Identities = 26/42 (61%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLNNFF-EEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FLN +E++V Q GYV++GEE KV LKKALYGLKQA
Sbjct: 911 SAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQA 952
>emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera]
Length = 1102
Score = 67.8 bits (164), Expect(2) = 3e-19
Identities = 32/64 (50%), Positives = 48/64 (75%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VY+TKLNS+G ++K+KARLVV Y +GVD+ + + +T+R+LLA+AAQ+G +H
Sbjct: 650 VYRTKLNSDGSINKHKARLVVKGYAQMFGVDFSETFAPVARLDTIRMLLALAAQKGWNIH 709
Query: 136 QIDV 125
Q+DV
Sbjct: 710 QMDV 713
Score = 52.8 bits (125), Expect(2) = 3e-19
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLNNFFEE-VYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FLN + EE ++VEQ G++ KG E KV +LKKALYGLKQA
Sbjct: 715 SAFLNGYLEEEIFVEQPEGFIVKGMEEKVYLLKKALYGLKQA 756
>gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 64.7 bits (156), Expect(2) = 4e-19
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VYK K NS G+V++YKARLVV Y + G+DY+ + ETVRL++++AAQ ++H
Sbjct: 45 VYKAKKNSKGEVERYKARLVVKGYSQRAGIDYDEVFALVARLETVRLIISLAAQNKWKIH 104
Query: 136 QIDV 125
Q+DV
Sbjct: 105 QMDV 108
Score = 55.5 bits (132), Expect(2) = 4e-19
Identities = 29/42 (69%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLN-NFFEEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FLN + EEVY+EQ GY+ KGEE+KV LKKALYGLKQA
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEENKVLRLKKALYGLKQA 151
>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
Length = 315
Score = 64.3 bits (155), Expect(2) = 7e-19
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VYK K NS G+V++YKARLV Y + G+DY+ + ETVRL++++AAQ+ R+H
Sbjct: 45 VYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIH 104
Query: 136 QIDV 125
Q+DV
Sbjct: 105 QMDV 108
Score = 55.1 bits (131), Expect(2) = 7e-19
Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLN-NFFEEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FLN + EEVY+EQ GY+ KGEE KV LKKALYGLKQA
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQA 151
>gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 61.6 bits (148), Expect(2) = 7e-19
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VYK K NS G+V++YKARLV Y + G+DY+ + ETVRL++++AAQ ++H
Sbjct: 45 VYKAKKNSKGEVERYKARLVAKGYSQRTGIDYDEVFAPVARLETVRLIISLAAQNKWKIH 104
Query: 136 QIDV 125
Q+DV
Sbjct: 105 QMDV 108
Score = 57.8 bits (138), Expect(2) = 7e-19
Identities = 30/42 (71%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLN-NFFEEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FLN +F EEVY+EQ GY+ KGEE+KV LKKALYGLKQA
Sbjct: 110 SAFLNGDFEEEVYIEQPQGYIVKGEENKVLRLKKALYGLKQA 151
>gb|AGH20666.1| reverse transcriptase, partial [Arabis hirsuta]
Length = 315
Score = 64.7 bits (156), Expect(2) = 9e-19
Identities = 32/64 (50%), Positives = 44/64 (68%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VYK K NS G+V++YKARLV Y + G+DY+ + ETVRL++++AAQ R+H
Sbjct: 45 VYKVKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVACLETVRLIISLAAQNNWRIH 104
Query: 136 QIDV 125
QIDV
Sbjct: 105 QIDV 108
Score = 54.3 bits (129), Expect(2) = 9e-19
Identities = 28/41 (68%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = -3
Query: 126 STFLN-NFFEEVYVEQSPGYVKKGEESKVCILKKALYGLKQ 7
STFLN + EEVY+EQ+ GY+ KGEE KV LK ALYGLKQ
Sbjct: 110 STFLNGDLEEEVYIEQTQGYIVKGEEDKVLRLKNALYGLKQ 150
>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 61.6 bits (148), Expect(2) = 1e-18
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VYK K NS G+V++YKARLV Y + G+DY+ + ETVRL++++AAQ ++H
Sbjct: 45 VYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIH 104
Query: 136 QIDV 125
Q+DV
Sbjct: 105 QMDV 108
Score = 57.0 bits (136), Expect(2) = 1e-18
Identities = 30/42 (71%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLN-NFFEEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
STFLN + EEVY+EQ GY+ KGEE KV LKKALYGLKQA
Sbjct: 110 STFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQA 151
>gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]
Length = 315
Score = 63.2 bits (152), Expect(2) = 2e-18
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VYK K NS G+V++YKARLV Y + G+DY+ + ETVRL++++AAQ+ ++H
Sbjct: 45 VYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWKIH 104
Query: 136 QIDV 125
Q+DV
Sbjct: 105 QMDV 108
Score = 55.1 bits (131), Expect(2) = 2e-18
Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLN-NFFEEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FLN + EEVY+EQ GY+ KGEE KV LKKALYGLKQA
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQA 151
>emb|CAN69241.1| hypothetical protein VITISV_009386 [Vitis vinifera]
Length = 925
Score = 66.6 bits (161), Expect(2) = 2e-18
Identities = 32/64 (50%), Positives = 48/64 (75%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VY+TKLNS+G ++K+KARLVV Y +GVD+ + + +T+R+LLA+AAQ+G +H
Sbjct: 487 VYRTKLNSDGSINKHKARLVVKGYAQMFGVDFFETFAPVARLDTIRMLLALAAQKGWNIH 546
Query: 136 QIDV 125
Q+DV
Sbjct: 547 QMDV 550
Score = 51.2 bits (121), Expect(2) = 2e-18
Identities = 25/42 (59%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLNNFFEE-VYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FLN + EE ++VEQ G++ +G E KV +LKKALYGLKQA
Sbjct: 552 SAFLNGYLEEEIFVEQPEGFIVQGMEEKVYLLKKALYGLKQA 593
>gb|AGH20672.1| reverse transcriptase, partial [Thlaspi arvense]
Length = 315
Score = 62.8 bits (151), Expect(2) = 3e-18
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VYK K NS G+V++YKARLV Y + G+DY+ + ETVRL++++AAQ R+H
Sbjct: 45 VYKAKKNSKGEVERYKARLVAKDYSQRAGIDYDEVFAPVARLETVRLIISLAAQNRWRIH 104
Query: 136 QIDV 125
Q+DV
Sbjct: 105 QMDV 108
Score = 54.7 bits (130), Expect(2) = 3e-18
Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLN-NFFEEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FLN + EEVY+EQ GY+ KGEE KV LKKALYGLKQA
Sbjct: 110 SAFLNGDLEEEVYIEQPRGYIVKGEEDKVLRLKKALYGLKQA 151
>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
Length = 1088
Score = 64.7 bits (156), Expect(2) = 3e-18
Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDY-EVSKSFGK*FETVRLLLAIAAQRG*RV 140
++KTKLN NG+VDKYKARLV Y +YG DY EV + ET+R+++++AAQ+ +
Sbjct: 624 IFKTKLNENGEVDKYKARLVAKGYSQQYGXDYVEVFAPVAR-LETIRIVISLAAQKDWMI 682
Query: 139 HQIDV 125
+Q+DV
Sbjct: 683 YQLDV 687
Score = 52.4 bits (124), Expect(2) = 3e-18
Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLNN-FFEEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FL+ EE +VEQ PGY +KG+ESKV LKKALYGLKQA
Sbjct: 689 SAFLHGEIHEEXFVEQPPGYEQKGKESKVYRLKKALYGLKQA 730
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 61.6 bits (148), Expect(2) = 4e-18
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VYK K NS G+V++YKARLV Y + G+DY+ + ETVRL++++AAQ ++H
Sbjct: 852 VYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIH 911
Query: 136 QIDV 125
Q+DV
Sbjct: 912 QMDV 915
Score = 55.1 bits (131), Expect(2) = 4e-18
Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLN-NFFEEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FLN + EEVY+EQ GY+ KGEE KV LKKALYGLKQA
Sbjct: 917 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQA 958
>emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]
Length = 1278
Score = 63.9 bits (154), Expect(2) = 4e-18
Identities = 32/64 (50%), Positives = 44/64 (68%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VYKTKLN +G VDKYKA LV YK ++GVDY+ + +T+ L+L++AAQ +H
Sbjct: 802 VYKTKLNKDGGVDKYKAXLVAKGYKQEFGVDYKXVFAPVAKLDTIXLVLSMAAQNSWSIH 861
Query: 136 QIDV 125
Q+DV
Sbjct: 862 QLDV 865
Score = 52.8 bits (125), Expect(2) = 4e-18
Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLNNFFEE-VYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FL+ EE VY++Q PGYVK+G E++V LKKALYGLKQA
Sbjct: 867 SAFLHGXLEEEVYIDQPPGYVKQGYENQVYKLKKALYGLKQA 908
>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
Length = 1265
Score = 66.6 bits (161), Expect(2) = 4e-18
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDY-EVSKSFGK*FETVRLLLAIAAQRG*RV 140
+YKTK N NG+VDKYKARLV Y ++GVDY EV + ET+RL++A+AAQR +
Sbjct: 828 IYKTKFNENGEVDKYKARLVAKGYTQQHGVDYTEVFAPVAR-METIRLVVALAAQRKWTI 886
Query: 139 HQIDV 125
+Q+DV
Sbjct: 887 YQLDV 891
Score = 50.1 bits (118), Expect(2) = 4e-18
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = -3
Query: 102 EEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
EEV+VEQ GYV+KG E KV LKKALYGLKQA
Sbjct: 902 EEVFVEQPCGYVQKGHEQKVYKLKKALYGLKQA 934
>emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera]
Length = 1120
Score = 64.3 bits (155), Expect(2) = 4e-18
Identities = 31/64 (48%), Positives = 46/64 (71%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VY+TKLN++G V+KYKARLVV Y +GVD+ + +T+R+LLA+ AQ+G + +
Sbjct: 678 VYRTKLNADGSVNKYKARLVVKGYSQVFGVDFSEXFAPVARLDTIRMLLALTAQKGWKTY 737
Query: 136 QIDV 125
Q+DV
Sbjct: 738 QLDV 741
Score = 52.4 bits (124), Expect(2) = 4e-18
Identities = 26/40 (65%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -3
Query: 120 FLNNFF-EEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
FLN + EE+YVEQ G+ KG+E KV +LKKALYGLKQA
Sbjct: 745 FLNGYLQEEIYVEQPEGFQVKGQEEKVYLLKKALYGLKQA 784
>gb|AGH20668.1| reverse transcriptase, partial [Arabis hirsuta]
Length = 315
Score = 62.8 bits (151), Expect(2) = 4e-18
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VY+ K NS G++++YKARLV N Y + G+DY+ + ET+RL++ +AAQ R+H
Sbjct: 45 VYQAKKNSKGEIERYKARLVANGYSQRAGIDYDEVFAPVARLETIRLIILLAAQNNWRIH 104
Query: 136 QIDV 125
Q+DV
Sbjct: 105 QMDV 108
Score = 53.9 bits (128), Expect(2) = 4e-18
Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLN-NFFEEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FLN + EEVY+EQ GY+ +GEE+KV LKKALYGLKQA
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVEGEENKVLRLKKALYGLKQA 151
>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 61.6 bits (148), Expect(2) = 4e-18
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VYK K NS G+V++YKARLV Y + G+DY+ + ETVRL++++AAQ ++H
Sbjct: 45 VYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIH 104
Query: 136 QIDV 125
Q+DV
Sbjct: 105 QMDV 108
Score = 55.1 bits (131), Expect(2) = 4e-18
Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLN-NFFEEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FLN + EEVY+EQ GY+ KGEE KV LKKALYGLKQA
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQA 151
>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 61.6 bits (148), Expect(2) = 4e-18
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VYK K NS G+V++YKARLV Y + G+DY+ + ETVRL++++AAQ ++H
Sbjct: 45 VYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIH 104
Query: 136 QIDV 125
Q+DV
Sbjct: 105 QMDV 108
Score = 55.1 bits (131), Expect(2) = 4e-18
Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLN-NFFEEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FLN + EEVY+EQ GY+ KGEE KV LKKALYGLKQA
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQA 151
>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 61.6 bits (148), Expect(2) = 4e-18
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VYK K NS G+V++YKARLV Y + G+DY+ + ETVRL++++AAQ ++H
Sbjct: 45 VYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIH 104
Query: 136 QIDV 125
Q+DV
Sbjct: 105 QMDV 108
Score = 55.1 bits (131), Expect(2) = 4e-18
Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLN-NFFEEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FLN + EEVY+EQ GY+ KGEE KV LKKALYGLKQA
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQA 151
>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera] gi|389595484|gb|AFK88545.1| reverse
transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 61.6 bits (148), Expect(2) = 4e-18
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = -2
Query: 316 VYKTKLNSNGKVDKYKARLVVNSYK*KYGVDYEVSKSFGK*FETVRLLLAIAAQRG*RVH 137
VYK K NS G+V++YKARLV Y + G+DY+ + ETVRL++++AAQ ++H
Sbjct: 45 VYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIH 104
Query: 136 QIDV 125
Q+DV
Sbjct: 105 QMDV 108
Score = 55.1 bits (131), Expect(2) = 4e-18
Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 126 STFLN-NFFEEVYVEQSPGYVKKGEESKVCILKKALYGLKQA 4
S FLN + EEVY+EQ GY+ KGEE KV LKKALYGLKQA
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQA 151