BLASTX nr result

ID: Paeonia25_contig00029195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00029195
         (452 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535423.1| pentatricopeptide repeat-containing protein,...    45   2e-07
ref|XP_002523995.1| pentatricopeptide repeat-containing protein,...    45   5e-07
ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containi...    43   2e-06
emb|CBI39966.3| unnamed protein product [Vitis vinifera]               43   2e-06
emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]    43   4e-06

>ref|XP_002535423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223523164|gb|EEF26960.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 563

 Score = 45.1 bits (105), Expect(2) = 2e-07
 Identities = 20/32 (62%), Positives = 24/32 (75%)
 Frame = -2

Query: 100 GVGLDLYIENVLVDLYARFNYFLKAHNMFEEI 5
           G G DLYI N LVD+YARF   +KA N+FEE+
Sbjct: 63  GFGFDLYIGNALVDMYARFGDLVKARNVFEEM 94



 Score = 35.4 bits (80), Expect(2) = 2e-07
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
 Frame = -3

Query: 213 NMYFK--PFN----SYLSPTVINVYPGLLDFEVGKIIYGYVLEVVLG 91
           ++YFK   FN    +Y  P+VIN    L DFE+G ++  +VLE+  G
Sbjct: 19  DLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVLEIGFG 65


>ref|XP_002523995.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536722|gb|EEF38363.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 212

 Score = 45.1 bits (105), Expect(2) = 5e-07
 Identities = 20/32 (62%), Positives = 24/32 (75%)
 Frame = -2

Query: 100 GVGLDLYIENVLVDLYARFNYFLKAHNMFEEI 5
           G G DLYI N LVD+YARF   +KA N+FEE+
Sbjct: 40  GFGFDLYIGNALVDMYARFGDLVKARNVFEEM 71



 Score = 34.3 bits (77), Expect(2) = 5e-07
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -3

Query: 192 NSYLSPTVINVYPGLLDFEVGKIIYGYVLEVVLG 91
           ++Y  P+VIN    L DFE+G ++  +VLE+  G
Sbjct: 9   DTYTFPSVINACAALGDFEIGNVVQNHVLEIGFG 42


>ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -2

Query: 100 GVGLDLYIENVLVDLYARFNYFLKAHNMFEEIP 2
           G G DLYI N L+D+Y RFN   KA  +FEE+P
Sbjct: 145 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP 177



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -3

Query: 192 NSYLSPTVINVYPGLLDFEVGKIIYGYVLEVVLG 91
           ++Y  P+VIN   GLLDFE+ K I+  VL++  G
Sbjct: 114 DTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFG 147


>emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -2

Query: 100 GVGLDLYIENVLVDLYARFNYFLKAHNMFEEIP 2
           G G DLYI N L+D+Y RFN   KA  +FEE+P
Sbjct: 145 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP 177



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -3

Query: 192 NSYLSPTVINVYPGLLDFEVGKIIYGYVLEVVLG 91
           ++Y  P+VIN   GLLDFE+ K I+  VL++  G
Sbjct: 114 DTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFG 147


>emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score = 43.1 bits (100), Expect(2) = 4e-06
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -2

Query: 100 GVGLDLYIENVLVDLYARFNYFLKAHNMFEEIP 2
           G G DLYI N L+D+Y RFN   KA  +FEE+P
Sbjct: 204 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP 236



 Score = 33.1 bits (74), Expect(2) = 4e-06
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 192 NSYLSPTVINVYPGLLDFEVGKIIYGYVLEVVLG 91
           ++Y  P+VIN   GLLDFE+ K I+  VL +  G
Sbjct: 173 DTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFG 206


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