BLASTX nr result

ID: Paeonia25_contig00026772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00026772
         (510 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25022.3| unnamed protein product [Vitis vinifera]               65   1e-08
ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_007213789.1| hypothetical protein PRUPE_ppa018727m1g, par...    61   2e-07
ref|XP_004308615.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07

>emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 40/98 (40%), Positives = 52/98 (53%)
 Frame = +1

Query: 193 FPSSIFNGKHHPXXXXXXXXSLSFSLDXXXXXXXXXXXXXXXGHIRRPKTVKTPSIAKPT 372
           F +SI  GK HP          S   D               GH+RRPKT+K PS+  PT
Sbjct: 18  FSASILAGKTHPTTAFCFSSKTSPEPDEPSNSS---------GHLRRPKTLK-PSL-NPT 66

Query: 373 SPSPKIPINPFRNLVKRTDTPTDEDKISNKLWMSSKLS 486
            PSPK   NP +N+V  T +PT+   ++NKLW+SS+LS
Sbjct: 67  PPSPKTTKNPLKNIVNPTISPTNPANLTNKLWLSSQLS 104


>ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Vitis vinifera]
          Length = 929

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 40/98 (40%), Positives = 52/98 (53%)
 Frame = +1

Query: 193 FPSSIFNGKHHPXXXXXXXXSLSFSLDXXXXXXXXXXXXXXXGHIRRPKTVKTPSIAKPT 372
           F +SI  GK HP          S   D               GH+RRPKT+K PS+  PT
Sbjct: 17  FSASILAGKTHPTTAFCFSSKTSPEPDEPSNSS---------GHLRRPKTLK-PSL-NPT 65

Query: 373 SPSPKIPINPFRNLVKRTDTPTDEDKISNKLWMSSKLS 486
            PSPK   NP +N+V  T +PT+   ++NKLW+SS+LS
Sbjct: 66  PPSPKTTKNPLKNIVNPTISPTNPANLTNKLWLSSQLS 103


>ref|XP_007213789.1| hypothetical protein PRUPE_ppa018727m1g, partial [Prunus persica]
           gi|462409654|gb|EMJ14988.1| hypothetical protein
           PRUPE_ppa018727m1g, partial [Prunus persica]
          Length = 740

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 47/118 (39%), Positives = 56/118 (47%), Gaps = 16/118 (13%)
 Frame = +1

Query: 181 SAAPFPSSIFNGKHHPXXXXXXXX--SLSFSLDXXXXXXXXXXXXXXXG----HIRRPKT 342
           +  PF + I N KHH           SLSFSL                      IRRPKT
Sbjct: 13  TTTPFSALIHNQKHHSSFSSSSSATTSLSFSLKPTPPPLPNSENPTSSSPPSNQIRRPKT 72

Query: 343 VKT-PSIAKPTSPSPKIPINPFRNLVKRTDTPTDEDK---------ISNKLWMSSKLS 486
           +KT PS +KPTS   KIP NPFRNL+  T  PT   K          ++KLW++SKLS
Sbjct: 73  LKTTPSPSKPTS---KIPSNPFRNLINPTHAPTPPIKSTTNTNYHPFTDKLWLTSKLS 127


>ref|XP_004308615.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 924

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
 Frame = +1

Query: 325 IRRPKTVKTPSIAKPTSPSPKIPINPFRNLVKRTDTPTD--EDKISNKLWMSSKLS 486
           +RRPKT+ TP   +PT P PKIP NPF+NL   T  PT      ++NKLW++SKLS
Sbjct: 35  LRRPKTITTPP--RPTKPIPKIPSNPFKNLSNPTHVPTPPITTSLTNKLWLTSKLS 88


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