BLASTX nr result

ID: Paeonia25_contig00025536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00025536
         (755 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi...   355   9e-96
gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Came...   339   7e-91
ref|XP_007051704.1| Pentatricopeptide repeat superfamily protein...   333   5e-89
ref|XP_007220199.1| hypothetical protein PRUPE_ppa003068mg [Prun...   323   5e-86
ref|XP_007160491.1| hypothetical protein PHAVU_002G326200g [Phas...   322   1e-85
ref|XP_006491189.1| PREDICTED: pentatricopeptide repeat-containi...   319   6e-85
ref|XP_006444949.1| hypothetical protein CICLE_v100190671mg, par...   319   6e-85
ref|XP_004503311.1| PREDICTED: pentatricopeptide repeat-containi...   316   5e-84
ref|XP_004503310.1| PREDICTED: pentatricopeptide repeat-containi...   316   5e-84
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi...   308   2e-81
ref|XP_006339632.1| PREDICTED: pentatricopeptide repeat-containi...   306   5e-81
gb|EYU32173.1| hypothetical protein MIMGU_mgv1a002389mg [Mimulus...   305   1e-80
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi...   304   2e-80
gb|EXB51620.1| hypothetical protein L484_012912 [Morus notabilis]     303   6e-80
ref|XP_004301483.1| PREDICTED: pentatricopeptide repeat-containi...   301   2e-79
ref|XP_002511921.1| pentatricopeptide repeat-containing protein,...   300   3e-79
ref|XP_004231193.1| PREDICTED: pentatricopeptide repeat-containi...   293   4e-77
ref|XP_004300812.1| PREDICTED: pentatricopeptide repeat-containi...   293   6e-77
ref|XP_004308336.1| PREDICTED: pentatricopeptide repeat-containi...   285   1e-74
ref|XP_002320827.2| pentatricopeptide repeat-containing family p...   279   7e-73

>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial [Vitis vinifera]
            gi|297745328|emb|CBI40408.3| unnamed protein product
            [Vitis vinifera]
          Length = 765

 Score =  355 bits (911), Expect = 9e-96
 Identities = 174/245 (71%), Positives = 201/245 (82%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA+VYYTLIS LS AG+LD A FV SK+KEAGF  D++ +NVLI+GFC            
Sbjct: 520  DAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEML 579

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EME A +KPD VTYNTLISHFSK+GDF TAHR ++ M+ EGLVPTVVTY  LIH+YCL+
Sbjct: 580  KEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLN 639

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            GN DEAMKIF++MSS S VPPNT+IY ILI+SLC+ NQV++ALSLMDDMKVK V+PNT T
Sbjct: 640  GNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNT 699

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            +NAMFKGL EKNW+ K FELMDRMTE ACNPDYITMEILT+WL AVGE  KL+SFVQGY+
Sbjct: 700  FNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYE 759

Query: 723  VSASA 737
            VSASA
Sbjct: 760  VSASA 764



 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
 Frame = +3

Query: 78  SKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXEMEVAQ-----MKPDSVTYNTLIS 242
           +++KE     +++ + +LI+  C             +M   +     ++PD +TYNTLI 
Sbjct: 329 AEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLID 388

Query: 243 HFSKSGDFITAHRELRNMLNEG-LVPTVVTYSTLIHSYCLHGNFDEAMKIFKNMSSASVV 419
              K G        +  M ++   +P  VTY+ LI  YC     + A ++F  M+   V 
Sbjct: 389 GLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGV- 447

Query: 420 PPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTTYNAMFKGLHEKNWVEKTFE 599
           PPN +    L+D +CK+ ++  A+   ++M+ K ++ N  TY A+ +     N +EK  E
Sbjct: 448 PPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAME 507

Query: 600 LMDRMTEEACNPDYITMEILTDWLPAVGE 686
           L D M E  C+PD I    L   L   G+
Sbjct: 508 LFDEMLEAGCSPDAIVYYTLISGLSQAGK 536


>gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Camellia sinensis]
          Length = 771

 Score =  339 bits (869), Expect = 7e-91
 Identities = 165/244 (67%), Positives = 197/244 (80%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA+VYYTLIS L+ AG+LDDA FV + +K+AGF LD++ YN+LI GFC            
Sbjct: 526  DAIVYYTLISGLTQAGKLDDASFVATVMKKAGFCLDIMSYNILIGGFCSKNKLDKAYEML 585

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EME A +KPD +TYN+LIS+FSK+GDF+TAHR +R M+++GLVPTVVT   LIH+YCL 
Sbjct: 586  KEMEQAGVKPDGITYNSLISYFSKNGDFMTAHRVMREMISDGLVPTVVTCGALIHAYCLV 645

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            G  DEAMKIF++M+S   VPPNT+IY IL+D+LCKN +VEVALSLMDDMK K VRPNT T
Sbjct: 646  GKLDEAMKIFRDMNSGLRVPPNTVIYNILVDALCKNRKVEVALSLMDDMKDKGVRPNTNT 705

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            +NAM KGL E NW+EK FELMD+MTE ACNPDYITMEIL DWLPAVGE +KLRSFVQGY+
Sbjct: 706  FNAMLKGLKEINWLEKAFELMDQMTEHACNPDYITMEILIDWLPAVGETEKLRSFVQGYE 765

Query: 723  VSAS 734
            VSAS
Sbjct: 766  VSAS 769



 Score =  108 bits (270), Expect = 2e-21
 Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 1/229 (0%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLK-EAGFGLDLICYNVLISGFCXXXXXXXXXXX 179
            D ++Y TLI  L   GR +  + +  K+K E G       YN LI GFC           
Sbjct: 385  DTILYNTLIDGLCKVGRQEQGLGLLEKMKLEQGCAPTTATYNCLIDGFCKSGEIGRAHEL 444

Query: 180  XXEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCL 359
              +M    + P+ +T NTL+    K G   +A      M  +GL    VTY+ LI+++C 
Sbjct: 445  FDQMNKEGVPPNVITLNTLVDGMCKHGRINSAMEFFNEMQGKGLKGNAVTYTALINAFCN 504

Query: 360  HGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTT 539
              N D+AM++F  MS A    P+ I+Y  LI  L +  +++ A  +   MK      +  
Sbjct: 505  ANNIDKAMQLFNEMSKAE-CSPDAIVYYTLISGLTQAGKLDDASFVATVMKKAGFCLDIM 563

Query: 540  TYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGE 686
            +YN +  G   KN ++K +E++  M +    PD IT   L  +    G+
Sbjct: 564  SYNILIGGFCSKNKLDKAYEMLKEMEQAGVKPDGITYNSLISYFSKNGD 612



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 7/219 (3%)
 Frame = +3

Query: 24  LISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXEMEVAQ 203
           LI+ L   G+ D A  V   + + G  +     N L++G               EM+   
Sbjct: 280 LITKLCRTGKSDRAWDVIHNVMKLGGDVQAPSCNALLAGLGRQQNFQKMNKLLAEMKENG 339

Query: 204 MKPDSVTYNTLISHFSKSGDFITAHRELRNMLNE-------GLVPTVVTYSTLIHSYCLH 362
           ++PD +T+  L++H  K      A      M  E        + P  + Y+TLI   C  
Sbjct: 340 IQPDIITFGILVNHLCKFRRVDEALEVFEKMSGERESDDGFSVKPDTILYNTLIDGLCKV 399

Query: 363 GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
           G  ++ + + + M       P T  Y  LID  CK+ ++  A  L D M  + V PN  T
Sbjct: 400 GRQEQGLGLLEKMKLEQGCAPTTATYNCLIDGFCKSGEIGRAHELFDQMNKEGVPPNVIT 459

Query: 543 YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEIL 659
            N +  G+ +   +    E  + M  +    + +T   L
Sbjct: 460 LNTLVDGMCKHGRINSAMEFFNEMQGKGLKGNAVTYTAL 498


>ref|XP_007051704.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
            cacao] gi|508703965|gb|EOX95861.1| Pentatricopeptide
            repeat superfamily protein, putative [Theobroma cacao]
          Length = 764

 Score =  333 bits (853), Expect = 5e-89
 Identities = 164/245 (66%), Positives = 191/245 (77%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA+VYY+LIS L  AGR+DDA  V SKLKEAGF  D+ CYNVLISGFC            
Sbjct: 519  DAIVYYSLISGLCQAGRMDDASNVLSKLKEAGFCPDVACYNVLISGFCKKNKIDKAYEIL 578

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EME A MK D+VTYNTLI++FSK G+F  AHR ++ M+ EGLVPTV TY  LIH+YCL+
Sbjct: 579  KEMEEAGMKVDNVTYNTLIAYFSKIGEFGVAHRVMKKMIGEGLVPTVATYGALIHAYCLN 638

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            GN  EAMK+FKNMSS S +PPNTIIY ILIDSLCKN++V++ALS+MDDM+ K V+PNTTT
Sbjct: 639  GNIKEAMKLFKNMSSISTIPPNTIIYNILIDSLCKNDEVQLALSMMDDMQAKGVKPNTTT 698

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            YNA+ KGL EKNW+   F LMD M E ACNPDYITMEILT+WL AVGE +KL+SFVQGYK
Sbjct: 699  YNAILKGLKEKNWLGDAFRLMDSMVEHACNPDYITMEILTEWLSAVGESEKLKSFVQGYK 758

Query: 723  VSASA 737
            VS  A
Sbjct: 759  VSTPA 763



 Score =  108 bits (269), Expect = 3e-21
 Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 1/229 (0%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLK-EAGFGLDLICYNVLISGFCXXXXXXXXXXX 179
            D + Y TLI  L   GR ++ + +  +++   G   + + YN LI GFC           
Sbjct: 378  DIITYNTLIDGLCKVGRQEEGLRLMERMRCTKGLAPNTVTYNCLIDGFCKVGEIERGKEL 437

Query: 180  XXEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCL 359
               M+   + P+ +T NTL+    + G   +A     +M  +GL    VTY+TLI ++C 
Sbjct: 438  YDRMKEEGVSPNVITLNTLVDGMCRHGRTSSALEFFNDMQGKGLKGNAVTYTTLISAFCN 497

Query: 360  HGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTT 539
              N D+A+ +F  +   S    + I+Y  LI  LC+  +++ A +++  +K     P+  
Sbjct: 498  VNNIDKAVDLFDQL-LRSGCSADAIVYYSLISGLCQAGRMDDASNVLSKLKEAGFCPDVA 556

Query: 540  TYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGE 686
             YN +  G  +KN ++K +E++  M E     D +T   L  +   +GE
Sbjct: 557  CYNVLISGFCKKNKIDKAYEILKEMEEAGMKVDNVTYNTLIAYFSKIGE 605



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 66/241 (27%), Positives = 103/241 (42%), Gaps = 8/241 (3%)
 Frame = +3

Query: 9   LVYYTLISNLSLAGRL--DDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
           +V+Y L+       +L  ++ I +  K  E       I    LI+  C            
Sbjct: 232 IVFYGLVKRERKGRKLSEEEIIKLVLKFGEHSVFPRTIWLTQLITRLCRSGKINQAWNVL 291

Query: 183 XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
            E+   +   ++  +N +++   +SGD    +  L  M    + P  VT+  LI+  C  
Sbjct: 292 QELLRLRAPLEAAPFNAVLTGLGRSGDVERMNMLLVEMKESDIQPNGVTFGILINQLCKS 351

Query: 363 GNFDEAMKIFKNMSSAS-----VVPPNTIIYTILIDSLCKNNQVEVALSLMDDMK-VKEV 524
              DEAM++   M   +      V  + I Y  LID LCK  + E  L LM+ M+  K +
Sbjct: 352 RRVDEAMEVLNRMGEGTGSDDVSVEADIITYNTLIDGLCKVGRQEEGLRLMERMRCTKGL 411

Query: 525 RPNTTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRS 704
            PNT TYN +  G  +   +E+  EL DRM EE  +P+ IT+  L D +   G       
Sbjct: 412 APNTVTYNCLIDGFCKVGEIERGKELYDRMKEEGVSPNVITLNTLVDGMCRHGRTSSALE 471

Query: 705 F 707
           F
Sbjct: 472 F 472



 Score = 86.7 bits (213), Expect = 8e-15
 Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
 Frame = +3

Query: 24  LISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXEMEVAQ 203
           LI+ L  +G+++ A  V  +L      L+   +N +++G               EM+ + 
Sbjct: 274 LITRLCRSGKINQAWNVLQELLRLRAPLEAAPFNAVLTGLGRSGDVERMNMLLVEMKESD 333

Query: 204 MKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEG-------LVPTVVTYSTLIHSYCLH 362
           ++P+ VT+  LI+   KS     A  E+ N + EG       +   ++TY+TLI   C  
Sbjct: 334 IQPNGVTFGILINQLCKSRRVDEA-MEVLNRMGEGTGSDDVSVEADIITYNTLIDGLCKV 392

Query: 363 GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
           G  +E +++ + M     + PNT+ Y  LID  CK  ++E    L D MK + V PN  T
Sbjct: 393 GRQEEGLRLMERMRCTKGLAPNTVTYNCLIDGFCKVGEIERGKELYDRMKEEGVSPNVIT 452

Query: 543 YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEIL 659
            N +  G+          E  + M  +    + +T   L
Sbjct: 453 LNTLVDGMCRHGRTSSALEFFNDMQGKGLKGNAVTYTTL 491


>ref|XP_007220199.1| hypothetical protein PRUPE_ppa003068mg [Prunus persica]
            gi|462416661|gb|EMJ21398.1| hypothetical protein
            PRUPE_ppa003068mg [Prunus persica]
          Length = 607

 Score =  323 bits (827), Expect = 5e-86
 Identities = 158/244 (64%), Positives = 190/244 (77%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA+VYY+LIS LS AGR+DDAI V SKLKEA F LDL+ YNVLI+GFC            
Sbjct: 362  DAIVYYSLISGLSQAGRMDDAISVVSKLKEACFSLDLVSYNVLINGFCKKNKLDKVHEMV 421

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EME A +KPD VTYNTLIS+F K+G+  T HR L  M++EGLVPT +T+  LIH+YCL+
Sbjct: 422  QEMEAAGVKPDGVTYNTLISYFCKAGELTTGHRILSKMIDEGLVPTAITFGALIHAYCLN 481

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            GN D+AMKIF+ M S S VPPNT+IY ILID+LCK N+VE+A+SL+D MK K VRPNT T
Sbjct: 482  GNTDKAMKIFREMGSKSKVPPNTVIYNILIDTLCKKNEVELAISLIDSMKDKGVRPNTAT 541

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            +NA+FKGL E N +EK FE MD+M + ACNPDYITMEILT+WL AVGE +KLR FVQGY+
Sbjct: 542  FNALFKGLKENNLLEKAFEFMDQMIKHACNPDYITMEILTEWLSAVGETEKLRRFVQGYE 601

Query: 723  VSAS 734
            V+AS
Sbjct: 602  VAAS 605



 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 8/229 (3%)
 Frame = +3

Query: 51  RLDDAIFVTSKL---KEAGFGL----DLICYNVLISGFCXXXXXXXXXXXXXEMEVAQ-M 206
           R+D+A+ +  K+   +E   G+    D++ YN LI G C             +M +    
Sbjct: 195 RIDEALELFEKISEGREKSDGVSTEPDVVIYNTLIDGLCKVGRQEEGLRLMEKMRLQNGC 254

Query: 207 KPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLHGNFDEAMK 386
            P++VTYN LI  F+K GD          M  EG+ P+V+T +T++   C HG  + A++
Sbjct: 255 APNTVTYNCLIDGFNKVGDIERGCELFHQMKEEGISPSVITLNTMVDCLCKHGRLNSAIE 314

Query: 387 IFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTTYNAMFKGL 566
            F N      V  N + Y  LI S C  N + +A+ L + M       +   Y ++  GL
Sbjct: 315 -FLNEMQRDGVKGNAVTYATLITSFCNVNNISMAMELFEQMLRDGGSTDAIVYYSLISGL 373

Query: 567 HEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQ 713
            +   ++    ++ ++ E   + D ++  +L +      +  K+   VQ
Sbjct: 374 SQAGRMDDAISVVSKLKEACFSLDLVSYNVLINGFCKKNKLDKVHEMVQ 422



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 49/219 (22%), Positives = 93/219 (42%)
 Frame = +3

Query: 3   DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
           + + Y  LI   +  G ++    +  ++KE G    +I  N ++   C            
Sbjct: 257 NTVTYNCLIDGFNKVGDIERGCELFHQMKEEGISPSVITLNTMVDCLCKHGRLNSAIEFL 316

Query: 183 XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
            EM+   +K ++VTY TLI+ F    +   A      ML +G     + Y +LI      
Sbjct: 317 NEMQRDGVKGNAVTYATLITSFCNVNNISMAMELFEQMLRDGGSTDAIVYYSLISGLSQA 376

Query: 363 GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
           G  D+A+ +   +  A     + + Y +LI+  CK N+++    ++ +M+   V+P+  T
Sbjct: 377 GRMDDAISVVSKLKEA-CFSLDLVSYNVLINGFCKKNKLDKVHEMVQEMEAAGVKPDGVT 435

Query: 543 YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEIL 659
           YN +     +   +     ++ +M +E   P  IT   L
Sbjct: 436 YNTLISYFCKAGELTTGHRILSKMIDEGLVPTAITFGAL 474



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 1/173 (0%)
 Frame = +3

Query: 207 KPDSVTYNTLISHFSKSGDFITAHRELRNM-LNEGLVPTVVTYSTLIHSYCLHGNFDEAM 383
           +PD V YNTLI    K G      R +  M L  G  P  VTY+ LI  +   G+ +   
Sbjct: 219 EPDVVIYNTLIDGLCKVGRQEEGLRLMEKMRLQNGCAPNTVTYNCLIDGFNKVGDIERGC 278

Query: 384 KIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTTYNAMFKG 563
           ++F  M    +  P+ I    ++D LCK+ ++  A+  +++M+   V+ N  TY  +   
Sbjct: 279 ELFHQMKEEGI-SPSVITLNTMVDCLCKHGRLNSAIEFLNEMQRDGVKGNAVTYATLITS 337

Query: 564 LHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
               N +    EL ++M  +  + D I    L   L   G      S V   K
Sbjct: 338 FCNVNNISMAMELFEQMLRDGGSTDAIVYYSLISGLSQAGRMDDAISVVSKLK 390


>ref|XP_007160491.1| hypothetical protein PHAVU_002G326200g [Phaseolus vulgaris]
            gi|561033906|gb|ESW32485.1| hypothetical protein
            PHAVU_002G326200g [Phaseolus vulgaris]
          Length = 760

 Score =  322 bits (824), Expect = 1e-85
 Identities = 156/245 (63%), Positives = 191/245 (77%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA+VYY+LIS LS AGR+DDA  V S+LK+AGFGLDL CYNVLISGFC            
Sbjct: 507  DAIVYYSLISGLSTAGRMDDASVVVSRLKQAGFGLDLTCYNVLISGFCKKKKLERVYEML 566

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EMEV  +KPD VTYNTL+S+  K GDF TA   ++ M+ EGL P+VVTY  +IH+YCL 
Sbjct: 567  NEMEVTGVKPDIVTYNTLVSYLGKIGDFETASNVMKRMIKEGLEPSVVTYGAVIHAYCLK 626

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
             N DEAMKIF+ M S S VPPNT+IY+ILID+LCKN+ VE A+SLMDDMK+K VRPNTTT
Sbjct: 627  KNVDEAMKIFEQMCSNSKVPPNTVIYSILIDALCKNSNVEKAVSLMDDMKIKGVRPNTTT 686

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            YNA+FKG+ +K  ++K FELMDRM E+AC+PDY+TMEILT+W  AVGE +KL+ FV+GY 
Sbjct: 687  YNAIFKGVRDKKMLQKAFELMDRMIEDACSPDYVTMEILTEWFDAVGEIEKLKCFVEGYP 746

Query: 723  VSASA 737
            VS+S+
Sbjct: 747  VSSSS 751



 Score =  100 bits (248), Expect = 7e-19
 Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGL-DLICYNVLISGFCXXXXXXXXXXX 179
            D +++ TLI  L   GR +  + +  ++K       + I YN LI GFC           
Sbjct: 366  DVVLFNTLIDGLCKVGREEHGLSLLEEMKTKKQSRPNTITYNCLIDGFCKAGNIGKAREL 425

Query: 180  XXEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCL 359
              +M    ++P  VT NT+++   K G    A      M  +GL    VTY+ LI ++C 
Sbjct: 426  YSQMIEEGVQPSVVTLNTMVNGLCKHGKVHNAVEFFNEMKGKGLKGNAVTYTALISAFCG 485

Query: 360  HGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTT 539
              N D+AM+ F +M S S   P+ I+Y  LI  L    +++ A  ++  +K      + T
Sbjct: 486  VNNIDKAMQYFDDMLS-SGCSPDAIVYYSLISGLSTAGRMDDASVVVSRLKQAGFGLDLT 544

Query: 540  TYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGE 686
             YN +  G  +K  +E+ +E+++ M      PD +T   L  +L  +G+
Sbjct: 545  CYNVLISGFCKKKKLERVYEMLNEMEVTGVKPDIVTYNTLVSYLGKIGD 593



 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
 Frame = +3

Query: 213 DSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLHGNFDEAMKIF 392
           ++ + N L++   +  D    ++ +  M   G+ P+VVT+  L++  C     DEA+++F
Sbjct: 289 EAASCNALLAGLGRERDIQRMNKLMAEMEEMGIKPSVVTFGILVNHLCKARRIDEALQVF 348

Query: 393 KNM------SSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKV-KEVRPNTTTYNA 551
             +      ++   V P+ +++  LID LCK  + E  LSL+++MK  K+ RPNT TYN 
Sbjct: 349 DKLRGKGEGNNRVGVEPDVVLFNTLIDGLCKVGREEHGLSLLEEMKTKKQSRPNTITYNC 408

Query: 552 MFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWL 671
           +  G  +   + K  EL  +M EE   P  +T+  + + L
Sbjct: 409 LIDGFCKAGNIGKARELYSQMIEEGVQPSVVTLNTMVNGL 448



 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 7/186 (3%)
 Frame = +3

Query: 123 NVLISGFCXXXXXXXXXXXXXEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLN 302
           N L++G               EME   +KP  VT+  L++H  K+     A +    +  
Sbjct: 294 NALLAGLGRERDIQRMNKLMAEMEEMGIKPSVVTFGILVNHLCKARRIDEALQVFDKLRG 353

Query: 303 EG-------LVPTVVTYSTLIHSYCLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSL 461
           +G       + P VV ++TLI   C  G  +  + + + M +     PNTI Y  LID  
Sbjct: 354 KGEGNNRVGVEPDVVLFNTLIDGLCKVGREEHGLSLLEEMKTKKQSRPNTITYNCLIDGF 413

Query: 462 CKNNQVEVALSLMDDMKVKEVRPNTTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDY 641
           CK   +  A  L   M  + V+P+  T N M  GL +   V    E  + M  +    + 
Sbjct: 414 CKAGNIGKARELYSQMIEEGVQPSVVTLNTMVNGLCKHGKVHNAVEFFNEMKGKGLKGNA 473

Query: 642 ITMEIL 659
           +T   L
Sbjct: 474 VTYTAL 479


>ref|XP_006491189.1| PREDICTED: pentatricopeptide repeat-containing protein At5g28460-like
            [Citrus sinensis]
          Length = 757

 Score =  319 bits (818), Expect = 6e-85
 Identities = 158/244 (64%), Positives = 191/244 (78%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            D++VY+TLIS L  AGR++DA  V SKLKEAGF  D++CYN LISGFC            
Sbjct: 512  DSVVYFTLISGLCQAGRMNDASLVVSKLKEAGFRPDIVCYNHLISGFCKKKMLDKAYEVL 571

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EME   M P+SVTYNTLIS  SKSG+F  A R L+ M+ EGLVPTVVTY  LIH++C++
Sbjct: 572  QEMEDIGMTPNSVTYNTLISFLSKSGNFSAARRVLKKMVKEGLVPTVVTYGALIHAFCVN 631

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            G+ DEAMKIFK +SS+S V PNT+IY ILIDSLCKNNQVE+ALSLM++MKVKEVRPNT T
Sbjct: 632  GHVDEAMKIFKELSSSSNVSPNTVIYNILIDSLCKNNQVELALSLMEEMKVKEVRPNTNT 691

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            YNAMFKGL +KN ++K F+LMDRM E AC+PDYI+MEILT+WL   G+ +KL+ FVQGY 
Sbjct: 692  YNAMFKGLRQKNMLDKAFKLMDRMIEHACHPDYISMEILTEWLSEAGQTEKLKKFVQGYA 751

Query: 723  VSAS 734
            VSA+
Sbjct: 752  VSAA 755



 Score =  100 bits (249), Expect = 5e-19
 Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 44/269 (16%)
 Frame = +3

Query: 9    LVYYTLISNLSLAGRLDDAIFVTSKL------KEAGFGLDLICYNVLISGFCXXXXXXXX 170
            + + T+I+ L    R D+A+ V  K+       E     D+I +N LI G C        
Sbjct: 330  VTFGTIINRLCKLYRADEALEVFEKMIAGKETAEISVEPDVIIFNTLIDGLCKVGKQEEA 389

Query: 171  XXXXXEMEVAQMK---PDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTL 341
                 +M +   K   P++VTYN LI+ F KSG+          M  EG+ P VVT +TL
Sbjct: 390  LGLIEQMRLRLQKGCMPNAVTYNCLINGFCKSGNIEKGLELFHLMKQEGVTPNVVTLNTL 449

Query: 342  IHSYCLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDM---- 509
            +   C HG  + A++ F+ ++   +   N + YTILI + C  N  + A+   DDM    
Sbjct: 450  VDGMCRHGRINSAVEFFQEVTRKGLC-ANAVTYTILITAFCNVNNFQEAIKWFDDMSRAG 508

Query: 510  -----------------------------KVKEV--RPNTTTYNAMFKGLHEKNWVEKTF 596
                                         K+KE   RP+   YN +  G  +K  ++K +
Sbjct: 509  CSADSVVYFTLISGLCQAGRMNDASLVVSKLKEAGFRPDIVCYNHLISGFCKKKMLDKAY 568

Query: 597  ELMDRMTEEACNPDYITMEILTDWLPAVG 683
            E++  M +    P+ +T   L  +L   G
Sbjct: 569  EVLQEMEDIGMTPNSVTYNTLISFLSKSG 597



 Score = 96.7 bits (239), Expect = 8e-18
 Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 10/245 (4%)
 Frame = +3

Query: 9   LVYYTLISNLSLAGRLDDAIFV--TSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
           +V+Y L+    +   + D   V   SK  E G   + +    LI+ FC            
Sbjct: 223 IVFYALMRREHVKNSVTDEELVGLVSKFAEHGVFPNAVWLTQLITRFCRKGKTDEAWDVL 282

Query: 183 XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             +       ++ + N L++   + GDF   ++    M    + P+VVT+ T+I+  C  
Sbjct: 283 HVLMKFDAPLEAASCNALLNALGREGDFKRMNQLFTEMKENDIEPSVVTFGTIINRLCKL 342

Query: 363 GNFDEAMKIFKNMSSASV-----VPPNTIIYTILIDSLCKNNQVEVALSLMDDMKV---K 518
              DEA+++F+ M +        V P+ II+  LID LCK  + E AL L++ M++   K
Sbjct: 343 YRADEALEVFEKMIAGKETAEISVEPDVIIFNTLIDGLCKVGKQEEALGLIEQMRLRLQK 402

Query: 519 EVRPNTTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKL 698
              PN  TYN +  G  +   +EK  EL   M +E   P+ +T+  L D +   G     
Sbjct: 403 GCMPNAVTYNCLINGFCKSGNIEKGLELFHLMKQEGVTPNVVTLNTLVDGMCRHGRINSA 462

Query: 699 RSFVQ 713
             F Q
Sbjct: 463 VEFFQ 467



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 9/211 (4%)
 Frame = +3

Query: 78  SKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXEM----EVAQM--KPDSVTYNTLI 239
           +++KE      ++ +  +I+  C             +M    E A++  +PD + +NTLI
Sbjct: 318 TEMKENDIEPSVVTFGTIINRLCKLYRADEALEVFEKMIAGKETAEISVEPDVIIFNTLI 377

Query: 240 SHFSKSG---DFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLHGNFDEAMKIFKNMSSA 410
               K G   + +    ++R  L +G +P  VTY+ LI+ +C  GN ++ +++F  M   
Sbjct: 378 DGLCKVGKQEEALGLIEQMRLRLQKGCMPNAVTYNCLINGFCKSGNIEKGLELFHLMKQE 437

Query: 411 SVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTTYNAMFKGLHEKNWVEK 590
            V P N +    L+D +C++ ++  A+    ++  K +  N  TY  +       N  ++
Sbjct: 438 GVTP-NVVTLNTLVDGMCRHGRINSAVEFFQEVTRKGLCANAVTYTILITAFCNVNNFQE 496

Query: 591 TFELMDRMTEEACNPDYITMEILTDWLPAVG 683
             +  D M+   C+ D +    L   L   G
Sbjct: 497 AIKWFDDMSRAGCSADSVVYFTLISGLCQAG 527



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 8/220 (3%)
 Frame = +3

Query: 24  LISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXEMEVAQ 203
           LI+     G+ D+A  V   L +    L+    N L++                EM+   
Sbjct: 265 LITRFCRKGKTDEAWDVLHVLMKFDAPLEAASCNALLNALGREGDFKRMNQLFTEMKEND 324

Query: 204 MKPDSVTYNTLISHFSKSGDFITAHRELRNML------NEGLVPTVVTYSTLIHSYCLHG 365
           ++P  VT+ T+I+   K      A      M+         + P V+ ++TLI   C  G
Sbjct: 325 IEPSVVTFGTIINRLCKLYRADEALEVFEKMIAGKETAEISVEPDVIIFNTLIDGLCKVG 384

Query: 366 NFDEAMKIFKNMSSA--SVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTT 539
             +EA+ + + M         PN + Y  LI+  CK+  +E  L L   MK + V PN  
Sbjct: 385 KQEEALGLIEQMRLRLQKGCMPNAVTYNCLINGFCKSGNIEKGLELFHLMKQEGVTPNVV 444

Query: 540 TYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEIL 659
           T N +  G+     +    E    +T +    + +T  IL
Sbjct: 445 TLNTLVDGMCRHGRINSAVEFFQEVTRKGLCANAVTYTIL 484


>ref|XP_006444949.1| hypothetical protein CICLE_v100190671mg, partial [Citrus
           clementina] gi|557547211|gb|ESR58189.1| hypothetical
           protein CICLE_v100190671mg, partial [Citrus clementina]
          Length = 450

 Score =  319 bits (818), Expect = 6e-85
 Identities = 158/244 (64%), Positives = 191/244 (78%)
 Frame = +3

Query: 3   DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
           D++VY+TLIS L  AGR++DA  V SKLKEAGF  D++CYN LISGFC            
Sbjct: 205 DSVVYFTLISGLCQAGRMNDASLVVSKLKEAGFRPDIVCYNHLISGFCKKKMLDKAYEVL 264

Query: 183 XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
            EME   M P+SVTYNTLIS  SKSG+F  A R L+ M+ EGLVPTVVTY  LIH++C++
Sbjct: 265 QEMEDIGMTPNSVTYNTLISFLSKSGNFSAARRVLKKMVKEGLVPTVVTYGALIHAFCVN 324

Query: 363 GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
           G+ DEAMKIFK +SS+S V PNT+IY ILIDSLCKNNQVE+ALSLM++MKVKEVRPNT T
Sbjct: 325 GHVDEAMKIFKELSSSSNVSPNTVIYNILIDSLCKNNQVELALSLMEEMKVKEVRPNTNT 384

Query: 543 YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
           YNAMFKGL +KN ++K F+LMDRM E AC+PDYI+MEILT+WL   G+ +KL+ FVQGY 
Sbjct: 385 YNAMFKGLRQKNMLDKAFKLMDRMIEHACHPDYISMEILTEWLSEAGQTEKLKKFVQGYA 444

Query: 723 VSAS 734
           VSA+
Sbjct: 445 VSAA 448



 Score =  100 bits (249), Expect = 5e-19
 Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 44/269 (16%)
 Frame = +3

Query: 9   LVYYTLISNLSLAGRLDDAIFVTSKL------KEAGFGLDLICYNVLISGFCXXXXXXXX 170
           + + T+I+ L    R D+A+ V  K+       E     D+I +N LI G C        
Sbjct: 23  VTFGTIINRLCKLYRADEALEVFEKMIAGKETAEISVEPDVIIFNTLIDGLCKVGKQEEA 82

Query: 171 XXXXXEMEVAQMK---PDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTL 341
                +M +   K   P++VTYN LI+ F KSG+          M  EG+ P VVT +TL
Sbjct: 83  LGLIEQMRLRLQKGCMPNAVTYNCLINGFCKSGNIEKGLELFHLMKQEGVTPNVVTLNTL 142

Query: 342 IHSYCLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDM---- 509
           +   C HG  + A++ F+ ++   +   N + YTILI + C  N  + A+   DDM    
Sbjct: 143 VDGMCRHGRINSAVEFFQEVTRKGLC-ANAVTYTILITAFCNVNNFQEAIKWFDDMSRAG 201

Query: 510 -----------------------------KVKEV--RPNTTTYNAMFKGLHEKNWVEKTF 596
                                        K+KE   RP+   YN +  G  +K  ++K +
Sbjct: 202 CSADSVVYFTLISGLCQAGRMNDASLVVSKLKEAGFRPDIVCYNHLISGFCKKKMLDKAY 261

Query: 597 ELMDRMTEEACNPDYITMEILTDWLPAVG 683
           E++  M +    P+ +T   L  +L   G
Sbjct: 262 EVLQEMEDIGMTPNSVTYNTLISFLSKSG 290



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 48/148 (32%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
 Frame = +3

Query: 294 MLNEGLVPTVVTYSTLIHSYCLHGNFDEAMKIFKNMSSASV-----VPPNTIIYTILIDS 458
           M    + P+VVT+ T+I+  C     DEA+++F+ M +        V P+ II+  LID 
Sbjct: 13  MKENDIEPSVVTFGTIINRLCKLYRADEALEVFEKMIAGKETAEISVEPDVIIFNTLIDG 72

Query: 459 LCKNNQVEVALSLMDDMKV---KEVRPNTTTYNAMFKGLHEKNWVEKTFELMDRMTEEAC 629
           LCK  + E AL L++ M++   K   PN  TYN +  G  +   +EK  EL   M +E  
Sbjct: 73  LCKVGKQEEALGLIEQMRLRLQKGCMPNAVTYNCLINGFCKSGNIEKGLELFHLMKQEGV 132

Query: 630 NPDYITMEILTDWLPAVGEEKKLRSFVQ 713
            P+ +T+  L D +   G       F Q
Sbjct: 133 TPNVVTLNTLVDGMCRHGRINSAVEFFQ 160



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 9/211 (4%)
 Frame = +3

Query: 78  SKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXEM----EVAQM--KPDSVTYNTLI 239
           +++KE      ++ +  +I+  C             +M    E A++  +PD + +NTLI
Sbjct: 11  TEMKENDIEPSVVTFGTIINRLCKLYRADEALEVFEKMIAGKETAEISVEPDVIIFNTLI 70

Query: 240 SHFSKSG---DFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLHGNFDEAMKIFKNMSSA 410
               K G   + +    ++R  L +G +P  VTY+ LI+ +C  GN ++ +++F  M   
Sbjct: 71  DGLCKVGKQEEALGLIEQMRLRLQKGCMPNAVTYNCLINGFCKSGNIEKGLELFHLMKQE 130

Query: 411 SVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTTYNAMFKGLHEKNWVEK 590
            V P N +    L+D +C++ ++  A+    ++  K +  N  TY  +       N  ++
Sbjct: 131 GVTP-NVVTLNTLVDGMCRHGRINSAVEFFQEVTRKGLCANAVTYTILITAFCNVNNFQE 189

Query: 591 TFELMDRMTEEACNPDYITMEILTDWLPAVG 683
             +  D M+   C+ D +    L   L   G
Sbjct: 190 AIKWFDDMSRAGCSADSVVYFTLISGLCQAG 220


>ref|XP_004503311.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like isoform X2 [Cicer arietinum]
          Length = 643

 Score =  316 bits (810), Expect = 5e-84
 Identities = 152/244 (62%), Positives = 188/244 (77%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA+VYY+LIS LS+AGR+DDA  V S+LK AGFGLD  CYNVLISGFC            
Sbjct: 386  DAIVYYSLISGLSIAGRMDDASVVVSQLKRAGFGLDRTCYNVLISGFCKKKKLERVYEML 445

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             +ME   +KPD+VTYNTL+S+  K+GDF  A + +  M+ EGL P+VVTY  +IH+YCL 
Sbjct: 446  NQMEETGVKPDTVTYNTLVSYLGKAGDFAAASKVMEKMIKEGLKPSVVTYGAVIHAYCLK 505

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
             N DEAMKIF+ M S S+VPPNT+IY ILID+LCK N VE A+SLMDDMKVK VRPNTTT
Sbjct: 506  KNVDEAMKIFEEMCSTSIVPPNTVIYNILIDALCKINNVEKAVSLMDDMKVKGVRPNTTT 565

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            YNA+ KG+ +K  + K FELMDRM E+AC+PDY+TMEILT+WL AVGE +KL+ FV+GY+
Sbjct: 566  YNAILKGVRDKRMLHKAFELMDRMVEDACSPDYVTMEILTEWLSAVGEIEKLKLFVEGYR 625

Query: 723  VSAS 734
            VS++
Sbjct: 626  VSSN 629



 Score =  108 bits (269), Expect = 3e-21
 Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 1/229 (0%)
 Frame = +3

Query: 3   DALVYYTLISNLSLAGRLDDAIFVTSKLK-EAGFGLDLICYNVLISGFCXXXXXXXXXXX 179
           D ++Y TLI  L   GR +D + +  ++K E     + + YN LI GFC           
Sbjct: 245 DVVLYNTLIDGLCKVGREEDGLSLLEEMKTEKKNRPNTVTYNCLIDGFCKAGNIDKAREL 304

Query: 180 XXEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCL 359
              M    ++P+ VT NTL+    K G   +A   L  M  +GL    VTY+ LI ++C 
Sbjct: 305 FGLMNEEGVQPNVVTLNTLVGGMCKIGRVYSAVEFLNEMKGKGLKGNAVTYTALISAFCG 364

Query: 360 HGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTT 539
             N D+AM+ F  M S+    P+ I+Y  LI  L    +++ A  ++  +K      + T
Sbjct: 365 VNNIDQAMQYFDEMLSSGC-SPDAIVYYSLISGLSIAGRMDDASVVVSQLKRAGFGLDRT 423

Query: 540 TYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGE 686
            YN +  G  +K  +E+ +E++++M E    PD +T   L  +L   G+
Sbjct: 424 CYNVLISGFCKKKKLERVYEMLNQMEETGVKPDTVTYNTLVSYLGKAGD 472



 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 55/215 (25%), Positives = 94/215 (43%)
 Frame = +3

Query: 3   DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
           + + Y  LI     AG +D A  +   + E G   +++  N L+ G C            
Sbjct: 281 NTVTYNCLIDGFCKAGNIDKARELFGLMNEEGVQPNVVTLNTLVGGMCKIGRVYSAVEFL 340

Query: 183 XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
            EM+   +K ++VTY  LIS F    +   A +    ML+ G  P  + Y +LI    + 
Sbjct: 341 NEMKGKGLKGNAVTYTALISAFCGVNNIDQAMQYFDEMLSSGCSPDAIVYYSLISGLSIA 400

Query: 363 GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
           G  D+A  +   +  A      T  Y +LI   CK  ++E    +++ M+   V+P+T T
Sbjct: 401 GRMDDASVVVSQLKRAGFGLDRT-CYNVLISGFCKKKKLERVYEMLNQMEETGVKPDTVT 459

Query: 543 YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYIT 647
           YN +   L +        ++M++M +E   P  +T
Sbjct: 460 YNTLVSYLGKAGDFAAASKVMEKMIKEGLKPSVVT 494



 Score = 90.1 bits (222), Expect = 7e-16
 Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 7/232 (3%)
 Frame = +3

Query: 48  GRLDDAIF-VTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXEMEVAQMKPDSVT 224
           G  D+ I  + +KL E G   D      LIS  C              +       ++ +
Sbjct: 113 GLADEEIMGLVTKLGEHGVFPDTFKLTQLISKLCGKRKNCVAWELLHGVMKLGGPVEAAS 172

Query: 225 YNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLHGNFDEAMKIF---- 392
            N L++   +  D    ++ L  M    + P+V+T+  LI+  C     DEA+ +F    
Sbjct: 173 CNALLTGLGRERDIQKMNKLLAEMEELKIRPSVITFGILINHLCKARRIDEALGVFDKLR 232

Query: 393 -KNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKV-KEVRPNTTTYNAMFKGL 566
            K   + + V P+ ++Y  LID LCK  + E  LSL+++MK  K+ RPNT TYN +  G 
Sbjct: 233 GKGEKNRNGVEPDVVLYNTLIDGLCKVGREEDGLSLLEEMKTEKKNRPNTVTYNCLIDGF 292

Query: 567 HEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            +   ++K  EL   M EE   P+ +T+  L   +  +G       F+   K
Sbjct: 293 CKAGNIDKARELFGLMNEEGVQPNVVTLNTLVGGMCKIGRVYSAVEFLNEMK 344



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 3/228 (1%)
 Frame = +3

Query: 9   LVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXE 188
           + +  LI++L  A R+D+A+ V  KL+  G                             E
Sbjct: 206 ITFGILINHLCKARRIDEALGVFDKLRGKG-----------------------------E 236

Query: 189 MEVAQMKPDSVTYNTLISHFSKSG---DFITAHRELRNMLNEGLVPTVVTYSTLIHSYCL 359
                ++PD V YNTLI    K G   D ++   E++        P  VTY+ LI  +C 
Sbjct: 237 KNRNGVEPDVVLYNTLIDGLCKVGREEDGLSLLEEMKTEKKNR--PNTVTYNCLIDGFCK 294

Query: 360 HGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTT 539
            GN D+A ++F  M+   V  PN +    L+  +CK  +V  A+  +++MK K ++ N  
Sbjct: 295 AGNIDKARELFGLMNEEGV-QPNVVTLNTLVGGMCKIGRVYSAVEFLNEMKGKGLKGNAV 353

Query: 540 TYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVG 683
           TY A+       N +++  +  D M    C+PD I    L   L   G
Sbjct: 354 TYTALISAFCGVNNIDQAMQYFDEMLSSGCSPDAIVYYSLISGLSIAG 401



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 6/185 (3%)
 Frame = +3

Query: 123 NVLISGFCXXXXXXXXXXXXXEMEVAQMKPDSVTYNTLISHFSKS---GDFITAHRELRN 293
           N L++G               EME  +++P  +T+  LI+H  K+    + +    +LR 
Sbjct: 174 NALLTGLGRERDIQKMNKLLAEMEELKIRPSVITFGILINHLCKARRIDEALGVFDKLRG 233

Query: 294 MLNE---GLVPTVVTYSTLIHSYCLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLC 464
              +   G+ P VV Y+TLI   C  G  ++ + + + M +     PNT+ Y  LID  C
Sbjct: 234 KGEKNRNGVEPDVVLYNTLIDGLCKVGREEDGLSLLEEMKTEKKNRPNTVTYNCLIDGFC 293

Query: 465 KNNQVEVALSLMDDMKVKEVRPNTTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYI 644
           K   ++ A  L   M  + V+PN  T N +  G+ +   V    E ++ M  +    + +
Sbjct: 294 KAGNIDKARELFGLMNEEGVQPNVVTLNTLVGGMCKIGRVYSAVEFLNEMKGKGLKGNAV 353

Query: 645 TMEIL 659
           T   L
Sbjct: 354 TYTAL 358


>ref|XP_004503310.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like isoform X1 [Cicer arietinum]
          Length = 776

 Score =  316 bits (810), Expect = 5e-84
 Identities = 152/244 (62%), Positives = 188/244 (77%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA+VYY+LIS LS+AGR+DDA  V S+LK AGFGLD  CYNVLISGFC            
Sbjct: 519  DAIVYYSLISGLSIAGRMDDASVVVSQLKRAGFGLDRTCYNVLISGFCKKKKLERVYEML 578

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             +ME   +KPD+VTYNTL+S+  K+GDF  A + +  M+ EGL P+VVTY  +IH+YCL 
Sbjct: 579  NQMEETGVKPDTVTYNTLVSYLGKAGDFAAASKVMEKMIKEGLKPSVVTYGAVIHAYCLK 638

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
             N DEAMKIF+ M S S+VPPNT+IY ILID+LCK N VE A+SLMDDMKVK VRPNTTT
Sbjct: 639  KNVDEAMKIFEEMCSTSIVPPNTVIYNILIDALCKINNVEKAVSLMDDMKVKGVRPNTTT 698

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            YNA+ KG+ +K  + K FELMDRM E+AC+PDY+TMEILT+WL AVGE +KL+ FV+GY+
Sbjct: 699  YNAILKGVRDKRMLHKAFELMDRMVEDACSPDYVTMEILTEWLSAVGEIEKLKLFVEGYR 758

Query: 723  VSAS 734
            VS++
Sbjct: 759  VSSN 762



 Score =  108 bits (269), Expect = 3e-21
 Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 1/229 (0%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLK-EAGFGLDLICYNVLISGFCXXXXXXXXXXX 179
            D ++Y TLI  L   GR +D + +  ++K E     + + YN LI GFC           
Sbjct: 378  DVVLYNTLIDGLCKVGREEDGLSLLEEMKTEKKNRPNTVTYNCLIDGFCKAGNIDKAREL 437

Query: 180  XXEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCL 359
               M    ++P+ VT NTL+    K G   +A   L  M  +GL    VTY+ LI ++C 
Sbjct: 438  FGLMNEEGVQPNVVTLNTLVGGMCKIGRVYSAVEFLNEMKGKGLKGNAVTYTALISAFCG 497

Query: 360  HGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTT 539
              N D+AM+ F  M S+    P+ I+Y  LI  L    +++ A  ++  +K      + T
Sbjct: 498  VNNIDQAMQYFDEMLSSGC-SPDAIVYYSLISGLSIAGRMDDASVVVSQLKRAGFGLDRT 556

Query: 540  TYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGE 686
             YN +  G  +K  +E+ +E++++M E    PD +T   L  +L   G+
Sbjct: 557  CYNVLISGFCKKKKLERVYEMLNQMEETGVKPDTVTYNTLVSYLGKAGD 605



 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 55/215 (25%), Positives = 94/215 (43%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            + + Y  LI     AG +D A  +   + E G   +++  N L+ G C            
Sbjct: 414  NTVTYNCLIDGFCKAGNIDKARELFGLMNEEGVQPNVVTLNTLVGGMCKIGRVYSAVEFL 473

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EM+   +K ++VTY  LIS F    +   A +    ML+ G  P  + Y +LI    + 
Sbjct: 474  NEMKGKGLKGNAVTYTALISAFCGVNNIDQAMQYFDEMLSSGCSPDAIVYYSLISGLSIA 533

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            G  D+A  +   +  A      T  Y +LI   CK  ++E    +++ M+   V+P+T T
Sbjct: 534  GRMDDASVVVSQLKRAGFGLDRT-CYNVLISGFCKKKKLERVYEMLNQMEETGVKPDTVT 592

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYIT 647
            YN +   L +        ++M++M +E   P  +T
Sbjct: 593  YNTLVSYLGKAGDFAAASKVMEKMIKEGLKPSVVT 627



 Score = 90.1 bits (222), Expect = 7e-16
 Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 7/232 (3%)
 Frame = +3

Query: 48  GRLDDAIF-VTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXEMEVAQMKPDSVT 224
           G  D+ I  + +KL E G   D      LIS  C              +       ++ +
Sbjct: 246 GLADEEIMGLVTKLGEHGVFPDTFKLTQLISKLCGKRKNCVAWELLHGVMKLGGPVEAAS 305

Query: 225 YNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLHGNFDEAMKIF---- 392
            N L++   +  D    ++ L  M    + P+V+T+  LI+  C     DEA+ +F    
Sbjct: 306 CNALLTGLGRERDIQKMNKLLAEMEELKIRPSVITFGILINHLCKARRIDEALGVFDKLR 365

Query: 393 -KNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKV-KEVRPNTTTYNAMFKGL 566
            K   + + V P+ ++Y  LID LCK  + E  LSL+++MK  K+ RPNT TYN +  G 
Sbjct: 366 GKGEKNRNGVEPDVVLYNTLIDGLCKVGREEDGLSLLEEMKTEKKNRPNTVTYNCLIDGF 425

Query: 567 HEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            +   ++K  EL   M EE   P+ +T+  L   +  +G       F+   K
Sbjct: 426 CKAGNIDKARELFGLMNEEGVQPNVVTLNTLVGGMCKIGRVYSAVEFLNEMK 477



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 3/228 (1%)
 Frame = +3

Query: 9   LVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXE 188
           + +  LI++L  A R+D+A+ V  KL+  G                             E
Sbjct: 339 ITFGILINHLCKARRIDEALGVFDKLRGKG-----------------------------E 369

Query: 189 MEVAQMKPDSVTYNTLISHFSKSG---DFITAHRELRNMLNEGLVPTVVTYSTLIHSYCL 359
                ++PD V YNTLI    K G   D ++   E++        P  VTY+ LI  +C 
Sbjct: 370 KNRNGVEPDVVLYNTLIDGLCKVGREEDGLSLLEEMKTEKKNR--PNTVTYNCLIDGFCK 427

Query: 360 HGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTT 539
            GN D+A ++F  M+   V  PN +    L+  +CK  +V  A+  +++MK K ++ N  
Sbjct: 428 AGNIDKARELFGLMNEEGV-QPNVVTLNTLVGGMCKIGRVYSAVEFLNEMKGKGLKGNAV 486

Query: 540 TYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVG 683
           TY A+       N +++  +  D M    C+PD I    L   L   G
Sbjct: 487 TYTALISAFCGVNNIDQAMQYFDEMLSSGCSPDAIVYYSLISGLSIAG 534



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 6/185 (3%)
 Frame = +3

Query: 123 NVLISGFCXXXXXXXXXXXXXEMEVAQMKPDSVTYNTLISHFSKS---GDFITAHRELRN 293
           N L++G               EME  +++P  +T+  LI+H  K+    + +    +LR 
Sbjct: 307 NALLTGLGRERDIQKMNKLLAEMEELKIRPSVITFGILINHLCKARRIDEALGVFDKLRG 366

Query: 294 MLNE---GLVPTVVTYSTLIHSYCLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLC 464
              +   G+ P VV Y+TLI   C  G  ++ + + + M +     PNT+ Y  LID  C
Sbjct: 367 KGEKNRNGVEPDVVLYNTLIDGLCKVGREEDGLSLLEEMKTEKKNRPNTVTYNCLIDGFC 426

Query: 465 KNNQVEVALSLMDDMKVKEVRPNTTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYI 644
           K   ++ A  L   M  + V+PN  T N +  G+ +   V    E ++ M  +    + +
Sbjct: 427 KAGNIDKARELFGLMNEEGVQPNVVTLNTLVGGMCKIGRVYSAVEFLNEMKGKGLKGNAV 486

Query: 645 TMEIL 659
           T   L
Sbjct: 487 TYTAL 491


>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Cucumis sativus]
            gi|449475521|ref|XP_004154479.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  308 bits (788), Expect = 2e-81
 Identities = 156/240 (65%), Positives = 183/240 (76%), Gaps = 2/240 (0%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA+VYYTLI  L+ AGRLDDA  V SKLKEAGF LD +CYNVLIS FC            
Sbjct: 367  DAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWL 426

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNE-GLVPTVVTYSTLIHSYCL 359
             EME+A +KPDSVTYNTLIS+FSK G+F  AH+ ++ M  E GL PTV TY  LIH+YCL
Sbjct: 427  NEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCL 486

Query: 360  HGNFDEAMKIFKNMSS-ASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNT 536
            + N DEA+KIFK M++ AS VPPNT+IY ILIDSLCK  QV  ALSL+DDMK + V PNT
Sbjct: 487  NNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNT 546

Query: 537  TTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQG 716
            TTYN++FK L +KNW++K F+LMDRM E+ACNPDYITMEILT+WL AVGE  KL+ F QG
Sbjct: 547  TTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITKLKKFTQG 606



 Score =  102 bits (255), Expect = 1e-19
 Identities = 63/237 (26%), Positives = 110/237 (46%)
 Frame = +3

Query: 3   DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
           D ++Y TLI  L   GR ++A+ +  K++          +N LI+G+C            
Sbjct: 227 DTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLF 286

Query: 183 XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
            EME AQ++P+ +T NTL+    K     TA    R M  +GL    VTY+  I+++C  
Sbjct: 287 NEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNV 346

Query: 363 GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            N ++AM+    MS      P+ ++Y  LI  L +  +++ A S++  +K      +   
Sbjct: 347 NNMNKAMEFLDEMSKDGCF-PDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVC 405

Query: 543 YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQ 713
           YN +     +KN +++  E ++ M      PD +T   L  +   +G  K    F++
Sbjct: 406 YNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMK 462



 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 6/246 (2%)
 Frame = +3

Query: 3   DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
           DA     L++ L  A        +  K+K+      +I + +LI+  C            
Sbjct: 151 DAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVF 210

Query: 183 XEMEVAQ------MKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLI 344
            +M+  +      + PD++ YNTLI    K G    A   +  M ++   PT  T++ LI
Sbjct: 211 EKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLI 270

Query: 345 HSYCLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEV 524
           + YC  G  + A K+F  M +A +  PN I    L+D +CK+N++  A+     M+ K +
Sbjct: 271 NGYCRSGEIEVAHKLFNEMENAQI-EPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGL 329

Query: 525 RPNTTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRS 704
           + N  TY          N + K  E +D M+++ C PD +    L   L   G      S
Sbjct: 330 KGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASS 389

Query: 705 FVQGYK 722
            V   K
Sbjct: 390 VVSKLK 395



 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 7/226 (3%)
 Frame = +3

Query: 9   LVYYTLISNLSLAGRL--DDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
           +V+  L+    L GR+  D+   + SK  +     D I    LIS  C            
Sbjct: 81  IVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNIL 140

Query: 183 XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             + +     D+   N L++   K+ +F   +  +R M +  + PTV+T+  LI+  C  
Sbjct: 141 DNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKF 200

Query: 363 GNFDEAMKIFKNMSSAS-----VVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVR 527
              D+A+++F+ M          V P+TI+Y  LID LCK  + E AL LM  M+  +  
Sbjct: 201 RRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCA 260

Query: 528 PNTTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTD 665
           P T T+N +  G      +E   +L + M      P+ IT+  L D
Sbjct: 261 PTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVD 306


>ref|XP_006339632.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Solanum tuberosum]
          Length = 761

 Score =  306 bits (784), Expect = 5e-81
 Identities = 149/244 (61%), Positives = 182/244 (74%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA VYY+LI  L  A R DDA  + SK KEAG GLD+ICYN LI   C            
Sbjct: 516  DAKVYYSLIMGLCQARRTDDASCIASKAKEAGIGLDIICYNALIGALCRKNKIDEAHKML 575

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             +ME A +KPD  TYNTLIS+FS+ G F TA R ++ M+++G +P VVTY  LIH++CL 
Sbjct: 576  KDMEEAGIKPDCYTYNTLISYFSEKGQFTTASRIMKRMIDDGFLPNVVTYGALIHAFCLA 635

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            GN DEAMKIF+NMSSA  VPPNT+IY ILID+L K+++VE A+SL+ +MK K VRPNT T
Sbjct: 636  GNLDEAMKIFQNMSSAINVPPNTVIYNILIDTLSKSDKVEAAISLLGEMKDKGVRPNTKT 695

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            YNA+FKGL E+NWVEK FE+MD+MTE ACNPDYITME+LT WL  +GE +KLRSFV+GY+
Sbjct: 696  YNALFKGLQERNWVEKAFEIMDQMTENACNPDYITMEVLTPWLSDIGETEKLRSFVEGYE 755

Query: 723  VSAS 734
            VS S
Sbjct: 756  VSTS 759



 Score =  101 bits (251), Expect = 3e-19
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLK-EAGFGLDLICYNVLISGFCXXXXXXXXXXX 179
            D ++Y TLI  L   G+ ++ + +  K++ + G   + I YN LI GFC           
Sbjct: 375  DVVLYNTLIDGLCKVGKQEEGLKLMEKMRLKNGSVPNTITYNCLIDGFCKAGEIERSLEL 434

Query: 180  XXEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCL 359
              +M++ ++ P+ +T NTL+    K G   +A      M  +GL   V+TY+ LI ++C 
Sbjct: 435  FDQMKMDRVVPNVITMNTLLHGMCKFGRVSSAMSFFAEMQEKGLKGNVITYTVLITTFCS 494

Query: 360  HGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTT 539
              N D AM +F  MS    +P   + Y+ LI  LC+  + + A  +    K   +  +  
Sbjct: 495  VNNIDRAMSLFNEMSENRCLPDAKVYYS-LIMGLCQARRTDDASCIASKAKEAGIGLDII 553

Query: 540  TYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGE 686
             YNA+   L  KN +++  +++  M E    PD  T   L  +    G+
Sbjct: 554  CYNALIGALCRKNKIDEAHKMLKDMEEAGIKPDCYTYNTLISYFSEKGQ 602



 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 5/211 (2%)
 Frame = +3

Query: 90  EAGFGLDLICYNVLISGFCXXXXXXXXXXXXXEMEVAQMKPDSVTYNTLISHFSKSGDFI 269
           E G  LD + +  LI+ FC             +M     +  + ++N L+S   +  DF 
Sbjct: 259 EHGVFLDDVWFTKLITKFCRSGKCDKAWDLLHDMMKLGGQVKASSFNALLSGLGREHDFQ 318

Query: 270 TAHRELRNMLNEGLVPTVVTYSTLIHSYCLHGNFDEAMKIFKNMSSAS----VVPPNTII 437
             +  +  M  + + P VVT+   I+  C     DEA+++F+ M  +     +V P+ ++
Sbjct: 319 KMNLLMNVMKEKEVNPDVVTFGIFINHLCKCYRVDEALQVFEKMGGSETDGVLVKPDVVL 378

Query: 438 YTILIDSLCKNNQVEVALSLMDDMKVKEVR-PNTTTYNAMFKGLHEKNWVEKTFELMDRM 614
           Y  LID LCK  + E  L LM+ M++K    PNT TYN +  G  +   +E++ EL D+M
Sbjct: 379 YNTLIDGLCKVGKQEEGLKLMEKMRLKNGSVPNTITYNCLIDGFCKAGEIERSLELFDQM 438

Query: 615 TEEACNPDYITMEILTDWLPAVGEEKKLRSF 707
             +   P+ ITM  L   +   G      SF
Sbjct: 439 KMDRVVPNVITMNTLLHGMCKFGRVSSAMSF 469



 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 6/222 (2%)
 Frame = +3

Query: 12  VYYT-LISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXE 188
           V++T LI+    +G+ D A  +   + + G  +    +N L+SG                
Sbjct: 267 VWFTKLITKFCRSGKCDKAWDLLHDMMKLGGQVKASSFNALLSGLGREHDFQKMNLLMNV 326

Query: 189 MEVAQMKPDSVTYNTLISHFSKS---GDFITAHRELRNMLNEGLV--PTVVTYSTLIHSY 353
           M+  ++ PD VT+   I+H  K     + +    ++     +G++  P VV Y+TLI   
Sbjct: 327 MKEKEVNPDVVTFGIFINHLCKCYRVDEALQVFEKMGGSETDGVLVKPDVVLYNTLIDGL 386

Query: 354 CLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPN 533
           C  G  +E +K+ + M   +   PNTI Y  LID  CK  ++E +L L D MK+  V PN
Sbjct: 387 CKVGKQEEGLKLMEKMRLKNGSVPNTITYNCLIDGFCKAGEIERSLELFDQMKMDRVVPN 446

Query: 534 TTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEIL 659
             T N +  G+ +   V         M E+    + IT  +L
Sbjct: 447 VITMNTLLHGMCKFGRVSSAMSFFAEMQEKGLKGNVITYTVL 488


>gb|EYU32173.1| hypothetical protein MIMGU_mgv1a002389mg [Mimulus guttatus]
          Length = 680

 Score =  305 bits (780), Expect = 1e-80
 Identities = 146/244 (59%), Positives = 184/244 (75%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA+VYY+LIS L  AGR+DDA FV S++KEAGF LD++ YN+LI GFC            
Sbjct: 435  DAVVYYSLISGLCQAGRMDDATFVVSRMKEAGFCLDVVSYNILIGGFCRKNKLDKAAEML 494

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             +ME A +KPD VTYNTL+S F  +GDF  AH+ ++ M+ +GL P VVTY  +I +YC  
Sbjct: 495  KDMETAGVKPDRVTYNTLLSFFCSNGDFKHAHKVMKKMIGDGLTPNVVTYGAMIQAYCTS 554

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
             N D AMKI+ +MSS+S VPPNT+IY +LIDSLCKN+ +EVAL+LMDDMK K VR N+ T
Sbjct: 555  NNIDAAMKIYTDMSSSSKVPPNTVIYNMLIDSLCKNDGLEVALTLMDDMKEKGVRQNSNT 614

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            YNA+FKGL ++  +EK  E MD+MTE+ACNPDY+TMEILT+WL  VGE +KLR FVQGY+
Sbjct: 615  YNALFKGLRQRKMLEKALEFMDQMTEQACNPDYVTMEILTEWLSEVGEIEKLRKFVQGYQ 674

Query: 723  VSAS 734
            VSAS
Sbjct: 675  VSAS 678



 Score = 86.7 bits (213), Expect = 8e-15
 Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 8/212 (3%)
 Frame = +3

Query: 72  VTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXEMEVAQMKPDSVTYNTLISHFS 251
           + +   E G  +++   N L++G               EM+ + +KP+ VTY   I+  S
Sbjct: 240 LVTSFSEHGSDVEIASCNALLTGLANNHDFARMNLLMKEMKESGIKPNIVTYGITINQLS 299

Query: 252 KSGDFITAHRELRNMLNE--GLVPTVVTYSTLIHSYCLHGNFDEAMKI------FKNMSS 407
           K      A   L  M     G+ P VV Y+TLI+  C  G  DEA +I      F+ MS 
Sbjct: 300 KLRRLDEALEVLEQMRGGEVGVEPDVVIYNTLINGLCKVGRQDEAGEIDKGNELFEQMSK 359

Query: 408 ASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTTYNAMFKGLHEKNWVE 587
             V   N +    L+D +CK+ +V  A+ L ++++ K V+ N  TY  +       N ++
Sbjct: 360 EGV-EINVVTLNTLVDGMCKHGRVSSAMELFNNIREKGVKGNAVTYTVLITAFCNVNNID 418

Query: 588 KTFELMDRMTEEACNPDYITMEILTDWLPAVG 683
           +  +L D M E  C+ D +    L   L   G
Sbjct: 419 RAMKLFDEMQENGCSSDAVVYYSLISGLCQAG 450


>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Glycine max]
          Length = 746

 Score =  304 bits (778), Expect = 2e-80
 Identities = 148/243 (60%), Positives = 181/243 (74%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA+VYY+LIS L +AGR++DA  V SKLK AGF LD  CYNVLISGFC            
Sbjct: 497  DAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELL 556

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EME   +KPD++TYNTLIS+  K+GDF TA + +  M+ EGL P+VVTY  +IH+YC  
Sbjct: 557  TEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSK 616

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
             N DE MKIF  M S S VPPNT+IY ILID+LC+NN V+ A+SLM+DMKVK VRPNTTT
Sbjct: 617  KNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTT 676

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            YNA+ KG+ +K  + K FELMDRM EEAC PDYITME+LT+WL AVGE +KL+ FV+GY+
Sbjct: 677  YNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQ 736

Query: 723  VSA 731
             S+
Sbjct: 737  DSS 739



 Score =  107 bits (268), Expect = 3e-21
 Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 42/263 (15%)
 Frame = +3

Query: 24   LISNLSLAGRLDDAIFVTSKLKEAG----FGL--DLICYNVLISGFCXXXXXXXXXXXXX 185
            L+++L  A R+D+A+ V  +L+  G     G+  D++ +N LI G C             
Sbjct: 322  LVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLE 381

Query: 186  EMEVAQM-KPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
            EM++  + +P++VTYN LI  F K+G+F  AH   R M  EG+ P V+T +TL+   C H
Sbjct: 382  EMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKH 441

Query: 363  G-----------------------------------NFDEAMKIFKNMSSASVVPPNTII 437
            G                                   N + AM+ F+ M S S   P+ ++
Sbjct: 442  GRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLS-SGCSPDAVV 500

Query: 438  YTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTTYNAMFKGLHEKNWVEKTFELMDRMT 617
            Y  LI  LC   ++  A  ++  +K+     + + YN +  G  +K  +E+ +EL+  M 
Sbjct: 501  YYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEME 560

Query: 618  EEACNPDYITMEILTDWLPAVGE 686
            E    PD IT   L  +L   G+
Sbjct: 561  ETGVKPDTITYNTLISYLGKTGD 583



 Score = 90.5 bits (223), Expect = 6e-16
 Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
 Frame = +3

Query: 213 DSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLHGNFDEAMKIF 392
           D+ + N L++   +  D    +  L  M    + P+VVT+  L++  C     DEA+++F
Sbjct: 280 DAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVF 339

Query: 393 -----KNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEV-RPNTTTYNAM 554
                K  S+   V P+ +++  LID LCK  + E  LSL+++MK+  + RPNT TYN +
Sbjct: 340 DRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCL 399

Query: 555 FKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
             G  +    ++  EL  +M EE   P+ IT+  L D L   G   +   F    K
Sbjct: 400 IDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMK 455



 Score = 90.5 bits (223), Expect = 6e-16
 Identities = 56/215 (26%), Positives = 94/215 (43%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            + + Y  LI     AG  D A  +  ++ E G   ++I  N L+ G C            
Sbjct: 392  NTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFF 451

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EM+   +K ++ TY  LIS F    +   A +    ML+ G  P  V Y +LI   C+ 
Sbjct: 452  NEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIA 511

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            G  ++A  +   +  A      +  Y +LI   CK  ++E    L+ +M+   V+P+T T
Sbjct: 512  GRMNDASVVVSKLKLAGFSLDRS-CYNVLISGFCKKKKLERVYELLTEMEETGVKPDTIT 570

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYIT 647
            YN +   L +        ++M++M +E   P  +T
Sbjct: 571  YNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVT 605



 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
 Frame = +3

Query: 186 EMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEG------LVPTVVTYSTLIH 347
           EME  +++P  VT+  L++H  K+     A +    +  +G      + P VV ++TLI 
Sbjct: 306 EMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLID 365

Query: 348 SYCLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVR 527
             C  G  ++ + + + M   ++  PNT+ Y  LID   K    + A  L   M  + V+
Sbjct: 366 GLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQ 425

Query: 528 PNTTTYNAMFKGLHEKNWVEKTFELMDRM 614
           PN  T N +  GL +   V +  E  + M
Sbjct: 426 PNVITLNTLVDGLCKHGRVHRAVEFFNEM 454


>gb|EXB51620.1| hypothetical protein L484_012912 [Morus notabilis]
          Length = 769

 Score =  303 bits (775), Expect = 6e-80
 Identities = 144/242 (59%), Positives = 186/242 (76%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA++YY+LIS LS AGR+DDA  V SKLKEAGF LD++ YNVLISGFC            
Sbjct: 515  DAILYYSLISGLSRAGRMDDASMVVSKLKEAGFCLDIVAYNVLISGFCKKNKLDKAYEML 574

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             +ME   +KP+++TYNTLISHF K G F TAH+ L+ MLN GL PTVVTY +LI++YC+ 
Sbjct: 575  KDMEETGIKPNTITYNTLISHFCKIGSFETAHKVLQKMLNSGLAPTVVTYGSLINAYCME 634

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
               +EAM++F+ MSS S +PPNT+IY ILIDSLCK N V++ALSLM+DMKV+ V+PNTTT
Sbjct: 635  DKIEEAMELFEWMSSGSKIPPNTVIYNILIDSLCKKNDVKLALSLMNDMKVRGVKPNTTT 694

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            YNA+FKGL E N +E+ F+ MD+M +++CNPDYITME+L +WL AVG+  +L  F+Q Y+
Sbjct: 695  YNALFKGLRENNLLEEAFKFMDQMADQSCNPDYITMEVLAEWLSAVGKRDELMKFLQRYE 754

Query: 723  VS 728
            VS
Sbjct: 755  VS 756



 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 1/238 (0%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGF-GLDLICYNVLISGFCXXXXXXXXXXX 179
            D ++Y TLI  L   GR ++ + +  +++   F   + + YN LI GF            
Sbjct: 374  DVIIYNTLIDGLCKVGRQEEGLNLMEQMRSEEFCKPNTVTYNCLIDGFNKVGEIERGLKI 433

Query: 180  XXEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCL 359
              +M+  Q+ PD VT NTL+    K G   +A +    M   G+     TY+ LI ++C 
Sbjct: 434  FDQMKRDQVPPDVVTLNTLVDGMCKLGRVGSAVKLFDVMQRTGIQGNAFTYTMLIAAFCS 493

Query: 360  HGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTT 539
              N ++AM++F  M S S    + I+Y  LI  L +  +++ A  ++  +K      +  
Sbjct: 494  VNNINKAMELFDQMVS-SRHSADAILYYSLISGLSRAGRMDDASMVVSKLKEAGFCLDIV 552

Query: 540  TYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQ 713
             YN +  G  +KN ++K +E++  M E    P+ IT   L      +G  +     +Q
Sbjct: 553  AYNVLISGFCKKNKLDKAYEMLKDMEETGIKPNTITYNTLISHFCKIGSFETAHKVLQ 610



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 7/186 (3%)
 Frame = +3

Query: 123 NVLISGFCXXXXXXXXXXXXXEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLN 302
           N L++G               +M+   +KP+ VTY  LI+   KS   I    E+  +L 
Sbjct: 303 NALLAGLARSKDFKKMNELMEKMKEKDIKPNVVTYGILINCLCKSRR-IDGALEVFAVLR 361

Query: 303 EG-------LVPTVVTYSTLIHSYCLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSL 461
           +G       + P V+ Y+TLI   C  G  +E + + + M S     PNT+ Y  LID  
Sbjct: 362 QGGENGKYLVKPDVIIYNTLIDGLCKVGRQEEGLNLMEQMRSEEFCKPNTVTYNCLIDGF 421

Query: 462 CKNNQVEVALSLMDDMKVKEVRPNTTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDY 641
            K  ++E  L + D MK  +V P+  T N +  G+ +   V    +L D M       + 
Sbjct: 422 NKVGEIERGLKIFDQMKRDQVPPDVVTLNTLVDGMCKLGRVGSAVKLFDVMQRTGIQGNA 481

Query: 642 ITMEIL 659
            T  +L
Sbjct: 482 FTYTML 487



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 56/208 (26%), Positives = 84/208 (40%), Gaps = 7/208 (3%)
 Frame = +3

Query: 81  KLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXEMEVAQ------MKPDSVTYNTLIS 242
           K+KE     +++ Y +LI+  C              +          +KPD + YNTLI 
Sbjct: 324 KMKEKDIKPNVVTYGILINCLCKSRRIDGALEVFAVLRQGGENGKYLVKPDVIIYNTLID 383

Query: 243 HFSKSGDFITAHRELRNMLNEGLV-PTVVTYSTLIHSYCLHGNFDEAMKIFKNMSSASVV 419
              K G        +  M +E    P  VTY+ LI  +   G  +  +KIF  M    V 
Sbjct: 384 GLCKVGRQEEGLNLMEQMRSEEFCKPNTVTYNCLIDGFNKVGEIERGLKIFDQMKRDQV- 442

Query: 420 PPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTTYNAMFKGLHEKNWVEKTFE 599
           PP+ +    L+D +CK  +V  A+ L D M+   ++ N  TY  +       N + K  E
Sbjct: 443 PPDVVTLNTLVDGMCKLGRVGSAVKLFDVMQRTGIQGNAFTYTMLIAAFCSVNNINKAME 502

Query: 600 LMDRMTEEACNPDYITMEILTDWLPAVG 683
           L D+M     + D I    L   L   G
Sbjct: 503 LFDQMVSSRHSADAILYYSLISGLSRAG 530



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 44/215 (20%), Positives = 88/215 (40%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            + + Y  LI   +  G ++  + +  ++K      D++  N L+ G C            
Sbjct: 410  NTVTYNCLIDGFNKVGEIERGLKIFDQMKRDQVPPDVVTLNTLVDGMCKLGRVGSAVKLF 469

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
              M+   ++ ++ TY  LI+ F    +   A      M++       + Y +LI      
Sbjct: 470  DVMQRTGIQGNAFTYTMLIAAFCSVNNINKAMELFDQMVSSRHSADAILYYSLISGLSRA 529

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            G  D+A  +   +  A     + + Y +LI   CK N+++ A  ++ DM+   ++PNT T
Sbjct: 530  GRMDDASMVVSKLKEAGFC-LDIVAYNVLISGFCKKNKLDKAYEMLKDMEETGIKPNTIT 588

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYIT 647
            YN +     +    E   +++ +M      P  +T
Sbjct: 589  YNTLISHFCKIGSFETAHKVLQKMLNSGLAPTVVT 623


>ref|XP_004301483.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 771

 Score =  301 bits (771), Expect = 2e-79
 Identities = 145/242 (59%), Positives = 185/242 (76%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA VY+ LIS LS AGR++DA FV SK+KEAGF +D++ YN +I GF             
Sbjct: 517  DAKVYHCLISGLSQAGRMEDASFVVSKMKEAGFSMDIVSYNGMIRGFSSKNKPDKIHEMI 576

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EMEV+++KPDSVTYNTL+++  KSGDF +AH+ L  ML+EG+VPTVVT+ TLIH++CL 
Sbjct: 577  EEMEVSRVKPDSVTYNTLLAYLGKSGDFESAHKVLDRMLSEGIVPTVVTFGTLIHAHCLD 636

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            G+ ++AM+IF++M S S +PPNT+IY  LI+SLCK N  E ALSLM+DMK K VRPNT T
Sbjct: 637  GDIEKAMRIFRDMGSNSKIPPNTVIYNDLINSLCKKNDAEQALSLMEDMKKKGVRPNTQT 696

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            +NA+FKGL E N ++K F+ MD+M EE CNPDYITMEILT+WLP VGE ++LR F QGY 
Sbjct: 697  FNALFKGLRENNLLKKAFQFMDQMVEEDCNPDYITMEILTEWLPGVGEIERLRKFAQGYP 756

Query: 723  VS 728
            VS
Sbjct: 757  VS 758



 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 5/247 (2%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGL----DLICYNVLISGFCXXXXXXXX 170
            + + +  LI+ L  + R+  A+ V  K+     G+    D++ YN LI G C        
Sbjct: 337  NVITFGILINRLCKSRRIGAAMEVFEKMSGGVKGVSAEPDVVIYNTLIDGLCKVGRQEEG 396

Query: 171  XXXXXEMEVAQ-MKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIH 347
                 +M       P++VTYN LI  F+K GD    H     M  EG+   V T +T++ 
Sbjct: 397  LRLMEKMRSQSGCAPNTVTYNILIDGFNKVGDIEKGHELFDKMKEEGIPMNVSTLNTMLD 456

Query: 348  SYCLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVR 527
                 G  + A++ F  M    +   N + YTILI S C    +  A+ L D M      
Sbjct: 457  GLSRRGRLNTALEFFNEMERKGL-KGNAVTYTILITSFCNVTNIRKAMELFDQMLSSGCP 515

Query: 528  PNTTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSF 707
             +   Y+ +  GL +   +E    ++ +M E   + D ++   +     +  +  K+   
Sbjct: 516  TDAKVYHCLISGLSQAGRMEDASFVVSKMKEAGFSMDIVSYNGMIRGFSSKNKPDKIHEM 575

Query: 708  VQGYKVS 728
            ++  +VS
Sbjct: 576  IEEMEVS 582



 Score = 86.7 bits (213), Expect = 8e-15
 Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 5/224 (2%)
 Frame = +3

Query: 3   DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
           +++V   L+S L    ++  A  V   + + G  ++   YN L+S               
Sbjct: 267 NSMVLTKLVSGLCRNRKVSLAWDVLHDVMKKGGAVEAAPYNALLSALGRGNEFKRMRELM 326

Query: 183 XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLV-----PTVVTYSTLIH 347
            +ME   +KP+ +T+  LI+   KS   I A  E+   ++ G+      P VV Y+TLI 
Sbjct: 327 AKMEEMGIKPNVITFGILINRLCKSRR-IGAAMEVFEKMSGGVKGVSAEPDVVIYNTLID 385

Query: 348 SYCLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVR 527
             C  G  +E +++ + M S S   PNT+ Y ILID   K   +E    L D MK + + 
Sbjct: 386 GLCKVGRQEEGLRLMEKMRSQSGCAPNTVTYNILIDGFNKVGDIEKGHELFDKMKEEGIP 445

Query: 528 PNTTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEIL 659
            N +T N M  GL  +  +    E  + M  +    + +T  IL
Sbjct: 446 MNVSTLNTMLDGLSRRGRLNTALEFFNEMERKGLKGNAVTYTIL 489



 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 1/236 (0%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            + + Y  LI   +  G ++    +  K+KE G  +++   N ++ G              
Sbjct: 412  NTVTYNILIDGFNKVGDIEKGHELFDKMKEEGIPMNVSTLNTMLDGLSRRGRLNTALEFF 471

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EME   +K ++VTY  LI+ F    +   A      ML+ G       Y  LI      
Sbjct: 472  NEMERKGLKGNAVTYTILITSFCNVTNIRKAMELFDQMLSSGCPTDAKVYHCLISGLSQA 531

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            G  ++A  +   M  A     + + Y  +I      N+ +    ++++M+V  V+P++ T
Sbjct: 532  GRMEDASFVVSKMKEAG-FSMDIVSYNGMIRGFSSKNKPDKIHEMIEEMEVSRVKPDSVT 590

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGE-EKKLRSF 707
            YN +   L +    E   +++DRM  E   P  +T   L       G+ EK +R F
Sbjct: 591  YNTLLAYLGKSGDFESAHKVLDRMLSEGIVPTVVTFGTLIHAHCLDGDIEKAMRIF 646


>ref|XP_002511921.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549101|gb|EEF50590.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 248

 Score =  300 bits (769), Expect = 3e-79
 Identities = 146/234 (62%), Positives = 180/234 (76%), Gaps = 1/234 (0%)
 Frame = +3

Query: 3   DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
           DA+VYY LIS LS A R+DDA  V +KLKEAGF  D++CYN+LI GFC            
Sbjct: 9   DAMVYYKLISGLSQARRMDDAASVLTKLKEAGFCPDIVCYNILIGGFCNKNRLDKAREML 68

Query: 183 XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
            +ME A ++PD++TYNTLIS+F K GD   AHR ++ M+ +GL PTVVTY +LIH+YCL+
Sbjct: 69  NDMEEAGLEPDTITYNTLISYFGKIGDIKVAHRMMKQMIKDGLQPTVVTYGSLIHAYCLN 128

Query: 363 GNFDEAMKIFKNM-SSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTT 539
           GN DEAMKIFK M ++AS V PN +IY ILIDSLC+NN +E+ALSLMDDM+VK V+PNT 
Sbjct: 129 GNVDEAMKIFKAMDAAASRVAPNNVIYNILIDSLCENNDIELALSLMDDMRVKGVKPNTG 188

Query: 540 TYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLR 701
           TYNAMFKGL E+ W+ +  ELMDRM E+ CNPDYITMEILT+WL AVGE +KL+
Sbjct: 189 TYNAMFKGLRERKWLNQALELMDRMMEQPCNPDYITMEILTEWLSAVGETEKLK 242


>ref|XP_004231193.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Solanum lycopersicum]
          Length = 761

 Score =  293 bits (750), Expect = 4e-77
 Identities = 142/244 (58%), Positives = 177/244 (72%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA  YY+LI  L  A R D+A  + SK KEA   LD+ICYN LI   C            
Sbjct: 516  DARAYYSLIMGLCQARRTDEASCIASKAKEARVDLDIICYNSLIGALCRKNKIEEAQKML 575

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             +ME A +KPD  TYNTLIS+FS+ G F  A R ++ M+++G +P VVTY  LIH+YC+ 
Sbjct: 576  KDMEEAGIKPDCYTYNTLISYFSEKGQFTAASRIMKRMIDDGYLPDVVTYGALIHAYCVA 635

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            GN DEAM IF+NMSSA  VPPNT+IY IL+D+LCK++++E A+SL+ DMK K VRPNT T
Sbjct: 636  GNLDEAMTIFQNMSSAINVPPNTVIYNILVDTLCKSDKLEAAISLLGDMKDKGVRPNTKT 695

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            +NA+FKGL E+NWVEK  E+MD+MTE ACNPDYITME+LT WL  +GE +KLRSFV+GYK
Sbjct: 696  FNALFKGLRERNWVEKALEIMDQMTENACNPDYITMEVLTPWLSDIGETEKLRSFVEGYK 755

Query: 723  VSAS 734
            VS S
Sbjct: 756  VSTS 759



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 35/250 (14%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGL-DLICYNVLISGFCXXXXXXXXXXX 179
            D ++Y TLI  L   G+ ++ + +  K++     + + I YN LI G+C           
Sbjct: 375  DLVLYNTLIDGLCKVGKQEEGLKLMEKMRLENVCVPNTITYNCLIDGYCKAGEIERSLEL 434

Query: 180  XXEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCL 359
              +M+  ++ P+ +T NTL+    K G   +A R    M   GL    +TY+ LI ++C 
Sbjct: 435  FDQMKKDRVVPNVITMNTLLHGMCKFGRVSSAMRFFAEMQERGLKGNAITYTILITTFCS 494

Query: 360  HGNFDEAMKIFKNMSSASVVPP----------------------------------NTII 437
              N D AM +F  MS    +P                                   + I 
Sbjct: 495  VNNIDRAMSLFNEMSEDGCLPDARAYYSLIMGLCQARRTDEASCIASKAKEARVDLDIIC 554

Query: 438  YTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTTYNAMFKGLHEKNWVEKTFELMDRMT 617
            Y  LI +LC+ N++E A  ++ DM+   ++P+  TYN +     EK        +M RM 
Sbjct: 555  YNSLIGALCRKNKIEEAQKMLKDMEEAGIKPDCYTYNTLISYFSEKGQFTAASRIMKRMI 614

Query: 618  EEACNPDYIT 647
            ++   PD +T
Sbjct: 615  DDGYLPDVVT 624



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 6/222 (2%)
 Frame = +3

Query: 12  VYYT-LISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXE 188
           V++T LI+    +G+ D A  +   + + G  +    +N L+ G               E
Sbjct: 267 VWFTKLITKFCRSGKCDKAWDLLHDMMKLGGQVKASSFNALLCGLGREHDFQKMNLLMNE 326

Query: 189 MEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEG-----LVPTVVTYSTLIHSY 353
           M+  ++ PD VT+   I++  K      A +    M   G     + P +V Y+TLI   
Sbjct: 327 MKEKEVNPDVVTFGIFINYLCKCYRVDEALQVFEKMGGSGTDGVLVKPDLVLYNTLIDGL 386

Query: 354 CLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPN 533
           C  G  +E +K+ + M   +V  PNTI Y  LID  CK  ++E +L L D MK   V PN
Sbjct: 387 CKVGKQEEGLKLMEKMRLENVCVPNTITYNCLIDGYCKAGEIERSLELFDQMKKDRVVPN 446

Query: 534 TTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEIL 659
             T N +  G+ +   V         M E     + IT  IL
Sbjct: 447 VITMNTLLHGMCKFGRVSSAMRFFAEMQERGLKGNAITYTIL 488


>ref|XP_004300812.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 763

 Score =  293 bits (749), Expect = 6e-77
 Identities = 140/241 (58%), Positives = 182/241 (75%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA VY  LIS LS AGR++DA FV SKLKEAGF +D++ YNV+I GFC            
Sbjct: 509  DAKVYRRLISGLSQAGRMEDASFVVSKLKEAGFSMDIVSYNVMIHGFCSENKPDKIHEMI 568

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EME + +KPDSVTYNTL+++  K GD  +A++    MLNEG+VPTVVT+ TLIH++CL 
Sbjct: 569  EEMEASGVKPDSVTYNTLLAYLGKHGDIESAYKVFDRMLNEGVVPTVVTFGTLIHAHCLD 628

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            G+ ++AM+IF++M S S +PPNT+IY+ LI+SLCK N VE ALSLM+DMK K VRP+T T
Sbjct: 629  GDIEKAMRIFRDMGSKSKMPPNTVIYSDLINSLCKKNDVEQALSLMEDMKAKGVRPDTQT 688

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYK 722
            ++A+FKGL E N ++K F+ MD+M EE CNPDYITM+ILT+WLP VGE ++LR F QG+ 
Sbjct: 689  FSALFKGLRENNLLKKAFQFMDQMVEEDCNPDYITMDILTEWLPGVGETERLRKFAQGFP 748

Query: 723  V 725
            V
Sbjct: 749  V 749



 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLK-EAGFGLDLICYNVLISGFCXXXXXXXXXXX 179
            D  +Y TLI  L   GR ++ + +  K++ ++G   D + YN+LI GF            
Sbjct: 369  DVGIYSTLIDGLCKVGRQEEGLRLMEKMRSQSGCAPDTVTYNILIDGFNKVGDIEKGREL 428

Query: 180  XXEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCL 359
              +M+   +  +  T NT++   S+ G   TA      M  +GL    VTY+ LI S+C 
Sbjct: 429  FDKMKEEGIPMNVSTLNTMLDGLSRRGRLNTALEFFNEMERKGLKGDFVTYTILITSFCN 488

Query: 360  HGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTT 539
              N  +AM++F  M +    P +  +Y  LI  L +  ++E A  ++  +K      +  
Sbjct: 489  VTNIHKAMELFDQMLTG--CPTDAKVYRRLISGLSQAGRMEDASFVVSKLKEAGFSMDIV 546

Query: 540  TYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGE 686
            +YN M  G   +N  +K  E+++ M      PD +T   L  +L   G+
Sbjct: 547  SYNVMIHGFCSENKPDKIHEMIEEMEASGVKPDSVTYNTLLAYLGKHGD 595



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 5/224 (2%)
 Frame = +3

Query: 3   DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
           +++V   L+S L    ++  A  V   + + G  L+    N L+S               
Sbjct: 260 NSVVLTKLVSGLCRNRKVGLAWDVLHDVMKKGGALEAAPCNALLSALGRGNEFERMRELM 319

Query: 183 XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLV-----PTVVTYSTLIH 347
            +ME   +KPD +T+  LI+   +S   I A  E+   ++ G+      P V  YSTLI 
Sbjct: 320 AKMEEMGIKPDVITFGILINRLCQSRR-IDAAMEVFEKMSGGVKGVSVEPDVGIYSTLID 378

Query: 348 SYCLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVR 527
             C  G  +E +++ + M S S   P+T+ Y ILID   K   +E    L D MK + + 
Sbjct: 379 GLCKVGRQEEGLRLMEKMRSQSGCAPDTVTYNILIDGFNKVGDIEKGRELFDKMKEEGIP 438

Query: 528 PNTTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEIL 659
            N +T N M  GL  +  +    E  + M  +    D++T  IL
Sbjct: 439 MNVSTLNTMLDGLSRRGRLNTALEFFNEMERKGLKGDFVTYTIL 482



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 14/254 (5%)
 Frame = +3

Query: 3   DALVYYTLISNLSLA-----GRLDDAIFVTSKL--KEAGFGLDLICYNVLISGFCXXXXX 161
           D+ +  T I N ++      GR+DDA+ V  ++   EA F +D     + +SG       
Sbjct: 181 DSALKTTFIRNEAIGLLLKMGRVDDALKVLDEMLDPEAKFQVDDFTVGLFLSGEIRGRSV 240

Query: 162 XXXXXXXXEMEVAQ--MKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYS 335
                     +  +  + P+SV    L+S   ++     A   L +++ +G        +
Sbjct: 241 SEEEIVEFVSKFGERVVFPNSVVLTKLVSGLCRNRKVGLAWDVLHDVMKKGGALEAAPCN 300

Query: 336 TLIHSYCLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDM-- 509
            L+ +      F+   ++   M    +  P+ I + ILI+ LC++ +++ A+ + + M  
Sbjct: 301 ALLSALGRGNEFERMRELMAKMEEMGI-KPDVITFGILINRLCQSRRIDAAMEVFEKMSG 359

Query: 510 --KVKEVRPNTTTYNAMFKGLHEKNWVEKTFELMDRM-TEEACNPDYITMEILTDWLPAV 680
             K   V P+   Y+ +  GL +    E+   LM++M ++  C PD +T  IL D    V
Sbjct: 360 GVKGVSVEPDVGIYSTLIDGLCKVGRQEEGLRLMEKMRSQSGCAPDTVTYNILIDGFNKV 419

Query: 681 GEEKKLRSFVQGYK 722
           G+ +K R      K
Sbjct: 420 GDIEKGRELFDKMK 433


>ref|XP_004308336.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 883

 Score =  285 bits (729), Expect = 1e-74
 Identities = 139/233 (59%), Positives = 174/233 (74%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            D  VY+ LIS LSLAGR++DA FV SKLKEAGF +D + YNV+I GF             
Sbjct: 487  DVRVYHCLISCLSLAGRMEDASFVVSKLKEAGFSMDTVSYNVMIKGFSGKNMPDKIHEMI 546

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EME +++KPDSVTYNTL+++ SK+ DF  AH+ L  M++EG+VPTVVTY TLIH++CL 
Sbjct: 547  EEMEASRVKPDSVTYNTLLAYLSKARDFKGAHKVLDRMMDEGIVPTVVTYGTLIHAHCLD 606

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            GN D+AM+IF++M S S + PNT+IY  LI+S CKNN VE ALSL+DDMK K  RPNT T
Sbjct: 607  GNIDKAMRIFRDMGSKSKISPNTVIYNELINSFCKNNDVEQALSLVDDMKDKGARPNTQT 666

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLR 701
            +NA+FKGL E N +EK F+ MDRM E+AC PDY TMEILT+WL  VGE ++LR
Sbjct: 667  FNALFKGLRENNLLEKAFQFMDRMVEQACKPDYTTMEILTEWLSCVGEIERLR 719



 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 67/240 (27%), Positives = 108/240 (45%), Gaps = 1/240 (0%)
 Frame = +3

Query: 9    LVYYTLISNLSLAGRLDDAIFVTSKLK-EAGFGLDLICYNVLISGFCXXXXXXXXXXXXX 185
            ++Y TLI  L   GR  + + +  K++ + G   + + Y+ LI GF              
Sbjct: 348  IIYNTLIDGLCKVGRPQEGLSLMEKMRSQDGCAPNTVTYSCLIGGFNKVGDIDRGLELFE 407

Query: 186  EMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLHG 365
            +M+   +  + VT NTL+    + G    A    + M  +GL    V+Y+ LI S+C   
Sbjct: 408  KMKEEGIPLNVVTLNTLLDGLCRHGRLNAALEFFKEMQRDGLKGNAVSYTLLISSFCDVN 467

Query: 366  NFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTTY 545
            N  +AM++F  M SA   P +  +Y  LI  L    ++E A  ++  +K      +T +Y
Sbjct: 468  NISKAMELFNQMLSAEC-PTDVRVYHCLISCLSLAGRMEDASFVVSKLKEAGFSMDTVSY 526

Query: 546  NAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGEEKKLRSFVQGYKV 725
            N M KG   KN  +K  E+++ M      PD +T   L  +L       K R F   +KV
Sbjct: 527  NVMIKGFSGKNMPDKIHEMIEEMEASRVKPDSVTYNTLLAYL------SKARDFKGAHKV 580



 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 51/215 (23%), Positives = 94/215 (43%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            + + Y  LI   +  G +D  + +  K+KE G  L+++  N L+ G C            
Sbjct: 382  NTVTYSCLIGGFNKVGDIDRGLELFEKMKEEGIPLNVVTLNTLLDGLCRHGRLNAALEFF 441

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EM+   +K ++V+Y  LIS F    +   A      ML+      V  Y  LI    L 
Sbjct: 442  KEMQRDGLKGNAVSYTLLISSFCDVNNISKAMELFNQMLSAECPTDVRVYHCLISCLSLA 501

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            G  ++A  +   +  A     +T+ Y ++I      N  +    ++++M+   V+P++ T
Sbjct: 502  GRMEDASFVVSKLKEAG-FSMDTVSYNVMIKGFSGKNMPDKIHEMIEEMEASRVKPDSVT 560

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYIT 647
            YN +   L +    +   +++DRM +E   P  +T
Sbjct: 561  YNTLLAYLSKARDFKGAHKVLDRMMDEGIVPTVVT 595



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 8/212 (3%)
 Frame = +3

Query: 72  VTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXEMEVA----QMKPDSVT-YNTL 236
           V  K++E G   +LI + + ++  C             +M V       KPD +  YNTL
Sbjct: 294 VMVKMEEIGIKPNLITFGLFVNHLCKSRRIDAALGVFEKMSVGVEGVSAKPDVIIIYNTL 353

Query: 237 ISHFSKSG---DFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLHGNFDEAMKIFKNMSS 407
           I    K G   + ++   ++R+   +G  P  VTYS LI  +   G+ D  +++F+ M  
Sbjct: 354 IDGLCKVGRPQEGLSLMEKMRSQ--DGCAPNTVTYSCLIGGFNKVGDIDRGLELFEKMKE 411

Query: 408 ASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTTYNAMFKGLHEKNWVE 587
             + P N +    L+D LC++ ++  AL    +M+   ++ N  +Y  +     + N + 
Sbjct: 412 EGI-PLNVVTLNTLLDGLCRHGRLNAALEFFKEMQRDGLKGNAVSYTLLISSFCDVNNIS 470

Query: 588 KTFELMDRMTEEACNPDYITMEILTDWLPAVG 683
           K  EL ++M    C  D      L   L   G
Sbjct: 471 KAMELFNQMLSAECPTDVRVYHCLISCLSLAG 502



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 5/224 (2%)
 Frame = +3

Query: 3   DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
           D+ +   L++ L   G++  A  V   + + G GL+    N +++               
Sbjct: 236 DSRILTKLVTVLCRNGKVSRAWDVLCDVMKMGGGLEAASCNAVLTALGRSNDFKRMGEVM 295

Query: 183 XEMEVAQMKPDSVTYNTLISHFSKSG--DFITAHRELRNMLNEGLVP---TVVTYSTLIH 347
            +ME   +KP+ +T+   ++H  KS   D      E  ++  EG+      ++ Y+TLI 
Sbjct: 296 VKMEEIGIKPNLITFGLFVNHLCKSRRIDAALGVFEKMSVGVEGVSAKPDVIIIYNTLID 355

Query: 348 SYCLHGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVR 527
             C  G   E + + + M S     PNT+ Y+ LI    K   ++  L L + MK + + 
Sbjct: 356 GLCKVGRPQEGLSLMEKMRSQDGCAPNTVTYSCLIGGFNKVGDIDRGLELFEKMKEEGIP 415

Query: 528 PNTTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEIL 659
            N  T N +  GL     +    E    M  +    + ++  +L
Sbjct: 416 LNVVTLNTLLDGLCRHGRLNAALEFFKEMQRDGLKGNAVSYTLL 459


>ref|XP_002320827.2| pentatricopeptide repeat-containing family protein, partial [Populus
            trichocarpa] gi|550323783|gb|EEE99142.2|
            pentatricopeptide repeat-containing family protein,
            partial [Populus trichocarpa]
          Length = 720

 Score =  279 bits (714), Expect = 7e-73
 Identities = 136/228 (59%), Positives = 172/228 (75%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXX 182
            DA+VYYTLIS  S AGR+ DA FV ++LK+ G   D +CYN LI GFC            
Sbjct: 480  DAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEML 539

Query: 183  XEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCLH 362
             EME A +KPD++TYNTLI++ SK+GD   A + +R M+  G+VPTV TY  +I++YCL+
Sbjct: 540  KEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLN 599

Query: 363  GNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTTT 542
            GN +EAM+IFK+M +AS VPPNT+IY ILI+SLCKNN+V+ A+SLM+DMK+  V PNTTT
Sbjct: 600  GNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTT 659

Query: 543  YNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGE 686
            YNA+FKGL ++  +EK FE MDRM E ACNPDYITMEILT+WL AVGE
Sbjct: 660  YNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGE 707



 Score =  111 bits (277), Expect = 3e-22
 Identities = 71/251 (28%), Positives = 116/251 (46%), Gaps = 5/251 (1%)
 Frame = +3

Query: 3    DALVYYTLISNLSLAGRLDDAIFVTSKLK-EAGFGLDLICYNVLISGFCXXXXXXXXXXX 179
            D ++Y TLI  L   GR  + + +  +++ + G   D I YN LI GFC           
Sbjct: 339  DVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKEL 398

Query: 180  XXEMEVAQMKPDSVTYNTLISHFSKSGDFITAHRELRNMLNEGLVPTVVTYSTLIHSYCL 359
              EM    + P+ VT NTL+    ++G   +A          G+    VTY+ LI+++C 
Sbjct: 399  FDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCN 458

Query: 360  HGNFDEAMKIFKNMSSASVVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPNTT 539
              NF++AM++F  M   S   P+ I+Y  LI    +  ++  A  ++ ++K   +RP+T 
Sbjct: 459  VNNFEKAMELFNEMLK-SGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTV 517

Query: 540  TYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDWLPAVGE----EKKLRSF 707
             YN +  G    N   + FE++  M E    PD IT   L  +    G+    +K +R  
Sbjct: 518  CYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKM 577

Query: 708  VQGYKVSASAT 740
            ++   V   AT
Sbjct: 578  IKAGVVPTVAT 588



 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 59/245 (24%), Positives = 88/245 (35%), Gaps = 43/245 (17%)
 Frame = +3

Query: 78  SKLKEAGFGLDLICYNVLISGFCXXXXXXXXXXXXXEMEVAQMKPDSVTYNTLISHFSKS 257
           +++ + G  L+    N L++G               +M    ++P+ VT+  LI+H  K 
Sbjct: 251 TEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKF 310

Query: 258 GDFITAHRELRNM--------LNEGLVPTVVTYSTLIHSYCLHGNFDEAMKIFKNMSSAS 413
                A   L  M        ++  + P VV Y+TLI   C  G   E + + + M S  
Sbjct: 311 RRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQK 370

Query: 414 VVPPNTIIYTILIDSLCKNNQVEVALSLMDDMKVKEVRPN-------------------- 533
              P+TI Y  LID  CK  ++E    L D+M  + V PN                    
Sbjct: 371 GCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSA 430

Query: 534 ---------------TTTYNAMFKGLHEKNWVEKTFELMDRMTEEACNPDYITMEILTDW 668
                            TY A+       N  EK  EL + M +  C+PD I    L   
Sbjct: 431 VNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISG 490

Query: 669 LPAVG 683
               G
Sbjct: 491 FSQAG 495


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