BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00024815
         (739 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   350   2e-94
emb|CBI21038.3| unnamed protein product [Vitis vinifera]              336   6e-90
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   336   6e-90
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   335   1e-89
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   331   2e-88
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   330   2e-88
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   328   1e-87
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun...   328   2e-87
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   326   4e-87
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   325   8e-87
gb|ACU17923.1| unknown [Glycine max]                                  323   5e-86
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   322   6e-86
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   316   5e-84
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...   316   5e-84
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...   316   6e-84
gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidops...   310   4e-82
ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   309   7e-82
ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   309   7e-82
ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha...   308   1e-81
ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phas...   308   2e-81

>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  350 bits (899), Expect = 2e-94
 Identities = 160/231 (69%), Positives = 194/231 (83%), Gaps = 1/231 (0%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            PP+LKPK+YPDFMGKEE++SYKS KILGRLYR IKDAYDED+  S+E + VPGDIPYD D
Sbjct: 970  PPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLVPGDIPYDSD 1029

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            LEV G++D++ DAWD KCSY GQL  L+ QYKV REEE+VTGH+WSMPKY+S+KQGEL++
Sbjct: 1030 LEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGELKD 1089

Query: 363  RLKHAYNALRKEFRLLFEKMDSNLGE-NSVDENRMYEQKASAWYQVTYHPEWVKKSLNMK 539
            RLKH+YN+L+KEFR +FEKMD    +    ++N++YEQKASAWYQV YHP WVKKSL ++
Sbjct: 1090 RLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSLELQ 1149

Query: 540  EPDGDGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
            +PDG G  ++LSFAWI ADYLARIKIR R T  VDS KP NSLAKY+ADR+
Sbjct: 1150 DPDGAGTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200


>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  336 bits (861), Expect = 6e-90
 Identities = 158/232 (68%), Positives = 196/232 (84%), Gaps = 2/232 (0%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            PP+LKPK+YPDFMGKEEF++Y+SNKILG++YR IKDAY+ED+  S+EQ F    +P+D+D
Sbjct: 804  PPYLKPKMYPDFMGKEEFQTYRSNKILGKMYRQIKDAYNEDVSESSEQIFGADKVPFDED 863

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            L + GSADF+ DAW +KCSY GQL  L+GQYKV REEE+VTGHVWSMPKY S+KQGEL E
Sbjct: 864  LGIPGSADFINDAWIHKCSYDGQLNGLLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTE 923

Query: 363  RLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNMK 539
            RLKHAY++L+KEFR +FEKM+S+  + + DE NR+YEQKASAWYQVTYHP WVKKSL ++
Sbjct: 924  RLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQ 983

Query: 540  EPDG-DGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
             PD   GE+++LSFAWITADYLARIKIR++ T  VDS KP NSLA+++ DRI
Sbjct: 984  NPDEVFGERVMLSFAWITADYLARIKIRRKGTGNVDSSKPINSLARFLVDRI 1035


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  336 bits (861), Expect = 6e-90
 Identities = 158/232 (68%), Positives = 196/232 (84%), Gaps = 2/232 (0%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            PP+LKPK+YPDFMGKEEF++Y+SNKILG++YR IKDAY+ED+  S+EQ F    +P+D+D
Sbjct: 966  PPYLKPKMYPDFMGKEEFQTYRSNKILGKMYRQIKDAYNEDVSESSEQIFGADKVPFDED 1025

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            L + GSADF+ DAW +KCSY GQL  L+GQYKV REEE+VTGHVWSMPKY S+KQGEL E
Sbjct: 1026 LGIPGSADFINDAWIHKCSYDGQLNGLLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTE 1085

Query: 363  RLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNMK 539
            RLKHAY++L+KEFR +FEKM+S+  + + DE NR+YEQKASAWYQVTYHP WVKKSL ++
Sbjct: 1086 RLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQ 1145

Query: 540  EPDG-DGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
             PD   GE+++LSFAWITADYLARIKIR++ T  VDS KP NSLA+++ DRI
Sbjct: 1146 NPDEVFGERVMLSFAWITADYLARIKIRRKGTGNVDSSKPINSLARFLVDRI 1197


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
            vesca]
          Length = 1197

 Score =  335 bits (858), Expect = 1e-89
 Identities = 158/232 (68%), Positives = 189/232 (81%), Gaps = 2/232 (0%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            PPHLKPKLYPDFMGK++++SYKSNKILGRLYR I DAYDED+  S+EQ+ VP D+ YD D
Sbjct: 967  PPHLKPKLYPDFMGKQDYQSYKSNKILGRLYRKICDAYDEDVANSSEQNHVPSDVKYDMD 1026

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            LEV  +ADF+ DAW+ KCSY  QL  LM QYK+ REEEIVTGHVWSMPKY S+KQGEL+E
Sbjct: 1027 LEVPKAADFIADAWERKCSYDSQLRGLMTQYKIMREEEIVTGHVWSMPKYTSRKQGELQE 1086

Query: 363  RLKHAYNALRKEFRLLFEKMDSNLGENSVDE--NRMYEQKASAWYQVTYHPEWVKKSLNM 536
            RLKH+Y+AL+KEFR  FEKMD+   E+ +D+  N  YEQKASAWYQVTYHP+WVKKSL++
Sbjct: 1087 RLKHSYSALKKEFRQFFEKMDTGF-ESLIDDQKNSFYEQKASAWYQVTYHPDWVKKSLDL 1145

Query: 537  KEPDGDGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
              PDG G+ ++LSFAWI ADYLARIKI++R    +D  KP N L KY+ADRI
Sbjct: 1146 HGPDGPGDVVMLSFAWIAADYLARIKIKRREVSNIDPKKPINILTKYLADRI 1197


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  331 bits (848), Expect = 2e-88
 Identities = 159/237 (67%), Positives = 191/237 (80%), Gaps = 7/237 (2%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAY------DEDLVTSAEQSFVPGD 164
            PPHLKPKLYPDFMGKE+++SY SNKILGRLYR +KD Y      D+D  TS+E + V GD
Sbjct: 967  PPHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSELNLVRGD 1026

Query: 165  IPYDKDLEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKK 344
            IPYDKDLEVSGS+D++ DAWD KCSY GQL  L+ QYKV REEE+VTGH+WSMPK NS+K
Sbjct: 1027 IPYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRK 1086

Query: 345  QGELRERLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVK 521
            QGEL+ERLK +Y++L+KEFR +FEKMDS+  + + DE N +YEQKASAWYQV YHP+WV 
Sbjct: 1087 QGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVN 1146

Query: 522  KSLNMKEPDGDGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
            KS+ ++EPD  G   +LSFAWI ADYLARIKIR R  + VD+ KP NSL KY+ADRI
Sbjct: 1147 KSMELQEPDAAGCASMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
            max] gi|571449461|ref|XP_006578148.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
            max]
          Length = 1204

 Score =  330 bits (847), Expect = 2e-88
 Identities = 162/240 (67%), Positives = 195/240 (81%), Gaps = 10/240 (4%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            PPHLKPKLYPDFMGKE  +SY+SNKILGRLYRHIKDAYDED + +   +FV GDIPYDKD
Sbjct: 966  PPHLKPKLYPDFMGKERHQSYRSNKILGRLYRHIKDAYDED-IEAPYLNFVTGDIPYDKD 1024

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            LEV GSADF+ DAW+ KCSY GQL+ L+GQYKV REEE+VTG +WSMPKYNS+KQGEL+E
Sbjct: 1025 LEVPGSADFIADAWEQKCSYDGQLSGLIGQYKVKREEEVVTGQIWSMPKYNSRKQGELKE 1084

Query: 363  RLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNM- 536
            RLKH+Y+AL+KEFR  FEK++S++GE S +E N +YEQKASAWYQVTYHPEWVKKSL++ 
Sbjct: 1085 RLKHSYSALKKEFRYTFEKLNSDVGELSEEEKNLLYEQKASAWYQVTYHPEWVKKSLDLQ 1144

Query: 537  ------KEPDGDGEKIILSFAWITADYLARIKIRQR--RTETVDSDKPKNSLAKYVADRI 692
                  +E D  G  ++LSF WI  DYLAR KIRQR  R+   DS KP + LAKY+++R+
Sbjct: 1145 DKSSENQEADSLGSTVMLSFPWIAVDYLARTKIRQRHQRSGNFDSTKPVDYLAKYLSERL 1204


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score =  328 bits (841), Expect = 1e-87
 Identities = 157/232 (67%), Positives = 188/232 (81%), Gaps = 2/232 (0%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDED-LVTSAEQSFVPGDIPYDK 179
            P  LKPK+YPDFMGKEE +SYKS KILGRLYR IKDAYD+D +  S+E +FV GDIPYD 
Sbjct: 967  PSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSELNFVRGDIPYDL 1026

Query: 180  DLEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELR 359
            DLEV G+ DF+ DAWD KCSY GQL  L+ QYKV REEE+VTGHVWSMPK +S+KQG+L+
Sbjct: 1027 DLEVLGATDFISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSSRKQGDLK 1086

Query: 360  ERLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNM 536
            ERLKH+YN L++EFR +FEKMD + G+   DE N +YE+KASAWYQVTYHP W++KSL +
Sbjct: 1087 ERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPHWIQKSLEL 1146

Query: 537  KEPDGDGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
            ++ DG G  ++LSFAWI ADYLARIKIR  R   VDS KP NSLAKY+ADR+
Sbjct: 1147 QDSDGAGISVMLSFAWIAADYLARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1198


>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
            gi|462422376|gb|EMJ26639.1| hypothetical protein
            PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  328 bits (840), Expect = 2e-87
 Identities = 159/232 (68%), Positives = 189/232 (81%), Gaps = 2/232 (0%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            P HLKP+LYPDF+GKE+ +SYKS KILGRLYR ++DAYDED  TS+E  + P DIPYD D
Sbjct: 965  PQHLKPRLYPDFLGKEDNQSYKSTKILGRLYRKVRDAYDEDAATSSELHYFPSDIPYDMD 1024

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            LEV G+ADFV DAW+ KCSY GQL  LMGQYKV REEEIVTGHVWS+PK NSKKQGEL+E
Sbjct: 1025 LEVPGAADFVFDAWEKKCSYDGQLKGLMGQYKVKREEEIVTGHVWSIPKSNSKKQGELKE 1084

Query: 363  RLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNMK 539
            RL H+YNAL+KEFR +FE +DSNL   + DE N + E+KASAWYQVTYHP+WVK+S  ++
Sbjct: 1085 RLSHSYNALKKEFRQMFENLDSNLEALTDDEKNLLCEKKASAWYQVTYHPKWVKQSPPLQ 1144

Query: 540  EPDGDGEKII-LSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
            EPDG G+ ++ LSFAWI ADYLARIKI+    E +DS KP NSL +Y+ADRI
Sbjct: 1145 EPDGPGDVVVMLSFAWIAADYLARIKIKCHGVEHIDSTKPINSLKRYLADRI 1196


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score =  326 bits (836), Expect = 4e-87
 Identities = 158/231 (68%), Positives = 185/231 (80%), Gaps = 1/231 (0%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            P HLKPKLYPDFMGKE ++SYKSNKILGRLYR  KDAYDED+  S+E    P DI YD D
Sbjct: 967  PAHLKPKLYPDFMGKEAYQSYKSNKILGRLYRQSKDAYDEDISVSSEVDINPVDIHYDTD 1026

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            LEV  S DF+ DAW+ KCSY GQL  L+ QYKV+REEE+VTGH+WSMPKYNS+KQGEL+E
Sbjct: 1027 LEVPESVDFIADAWNQKCSYDGQLNGLLEQYKVNREEELVTGHIWSMPKYNSRKQGELKE 1086

Query: 363  RLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNMK 539
            RLKH+Y+ALRKEFR +FEKMDS+    S DE N ++E+KASAWYQVTYHPEWVKKSL+++
Sbjct: 1087 RLKHSYSALRKEFRQVFEKMDSDCELLSEDEKNALFERKASAWYQVTYHPEWVKKSLDLQ 1146

Query: 540  EPDGDGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
            E D     ++LSFAWI  DYLARIKIR R    +D+ KP N LA+YVADRI
Sbjct: 1147 EQDSARSVVLLSFAWIANDYLARIKIRCREMANIDTSKPVNYLARYVADRI 1197


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
            max] gi|571459266|ref|XP_006581359.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
            max]
          Length = 1204

 Score =  325 bits (834), Expect = 8e-87
 Identities = 161/240 (67%), Positives = 192/240 (80%), Gaps = 10/240 (4%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            PPHLKPKLYPDFMGKE  +SY+S KILGRLYR IKDAYDED + +   +FV GDIPYDKD
Sbjct: 966  PPHLKPKLYPDFMGKERHQSYRSKKILGRLYRRIKDAYDED-IDAPYLNFVTGDIPYDKD 1024

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            LEV GSADF+ DAW+ KCSY GQL+ L+GQYKV REEE+VTG +WSMPKYNS+KQGEL+E
Sbjct: 1025 LEVPGSADFIADAWEQKCSYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKE 1084

Query: 363  RLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNM- 536
            RLKH+Y+AL+KEFR  FEK++S++GE S +E N  YEQKASAWYQVTYHPEWVKKSL++ 
Sbjct: 1085 RLKHSYSALKKEFRHTFEKLNSDVGELSEEEKNLFYEQKASAWYQVTYHPEWVKKSLDLQ 1144

Query: 537  ------KEPDGDGEKIILSFAWITADYLARIKIRQR--RTETVDSDKPKNSLAKYVADRI 692
                  +E D  G  ++LSF WI  DYLAR KIRQR  R    DS KP +SLAKY+++R+
Sbjct: 1145 DKSSENQEADSLGSTVMLSFPWIAVDYLARTKIRQRHQRCGNFDSTKPVDSLAKYLSERL 1204


>gb|ACU17923.1| unknown [Glycine max]
          Length = 290

 Score =  323 bits (827), Expect = 5e-86
 Identities = 160/240 (66%), Positives = 191/240 (79%), Gaps = 10/240 (4%)
 Frame = +3

Query: 3   PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
           PPHLKPKLYPDFMGKE  +SY+S KILGRLYR IKDAYDED + +   +FV G IPYDKD
Sbjct: 52  PPHLKPKLYPDFMGKERHQSYRSKKILGRLYRRIKDAYDED-IDAPYLNFVTGGIPYDKD 110

Query: 183 LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
           LEV GSADF+ DAW+ KCSY GQL+ L+GQYKV REEE+VTG +WSMPKYNS+KQGEL+E
Sbjct: 111 LEVPGSADFIADAWEQKCSYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKE 170

Query: 363 RLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNM- 536
           RLKH+Y+AL+KEFR  FEK++S++GE S +E N  YEQKASAWYQVTYHPEWVKKSL++ 
Sbjct: 171 RLKHSYSALKKEFRHTFEKLNSDVGELSEEEKNLFYEQKASAWYQVTYHPEWVKKSLDLQ 230

Query: 537 ------KEPDGDGEKIILSFAWITADYLARIKIRQR--RTETVDSDKPKNSLAKYVADRI 692
                 +E D  G  ++LSF WI  DYLAR KIRQR  R    DS KP +SLAKY+++R+
Sbjct: 231 DKSSENQEADSLGSTVMLSFPWIAVDYLARTKIRQRHQRCGNFDSTKPVDSLAKYLSERL 290


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
            gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
            6 [Gossypium hirsutum]
          Length = 1196

 Score =  322 bits (826), Expect = 6e-86
 Identities = 153/231 (66%), Positives = 186/231 (80%), Gaps = 1/231 (0%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            P  LKPKLYPDFMGKEEF+SYKSNKILGRLYR+IKDAYD+D+  S+E +F   DI YD D
Sbjct: 966  PAQLKPKLYPDFMGKEEFQSYKSNKILGRLYRYIKDAYDKDVSESSELNFGASDINYDAD 1025

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            LE++GSAD++ DAW  KCSY GQL  L+ QYKV REEE+VTG +WSMPKY SKK G+L+E
Sbjct: 1026 LEITGSADYITDAWAKKCSYDGQLIGLLKQYKVKREEEVVTGQIWSMPKYASKKLGDLKE 1085

Query: 363  RLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNMK 539
            +L H+Y +LRKEFR LFE MDS   + + DE N++YE+KASAWYQVTYHPEWV+K L  +
Sbjct: 1086 KLGHSYGSLRKEFRQLFENMDSEFEQLNEDEKNKLYERKASAWYQVTYHPEWVQKKLEFQ 1145

Query: 540  EPDGDGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
            +PDGD   ++LSFAWI ADYLARIK+R + TE +D  KP NSL +Y+ADRI
Sbjct: 1146 KPDGDEGVVMLSFAWIAADYLARIKVRHQGTENLDFAKPVNSLVRYLADRI 1196


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  316 bits (810), Expect = 5e-84
 Identities = 147/232 (63%), Positives = 187/232 (80%), Gaps = 2/232 (0%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDED-LVTSAEQSFVPGDIPYDK 179
            PPHLKPKLYPDFMGKE  +SYKS KILG++YR I+DAYD+D ++TS E +F PGD+ YD 
Sbjct: 966  PPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDV 1025

Query: 180  DLEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELR 359
            DLEV+G+ DF+ +AWD KCSY GQL+ L+GQYKV+REEEIVTGH+WSMPKY S+KQGEL+
Sbjct: 1026 DLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELK 1085

Query: 360  ERLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNM 536
            E+LKH+Y+ L+K+FR +FE +     + + DE N +YE+KASAWYQV YHP W+KKSL +
Sbjct: 1086 EKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLEL 1145

Query: 537  KEPDGDGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
            +EPD      +LSF WI ADYLARIKI+ RRT++ D  KP NSLA Y++DR+
Sbjct: 1146 REPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score =  316 bits (810), Expect = 5e-84
 Identities = 147/232 (63%), Positives = 187/232 (80%), Gaps = 2/232 (0%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDED-LVTSAEQSFVPGDIPYDK 179
            PPHLKPKLYPDFMGKE  +SYKS KILG++YR I+DAYD+D ++TS E +F PGD+ YD 
Sbjct: 966  PPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDV 1025

Query: 180  DLEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELR 359
            DLEV+G+ DF+ +AWD KCSY GQL+ L+GQYKV+REEEIVTGH+WSMPKY S+KQGEL+
Sbjct: 1026 DLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELK 1085

Query: 360  ERLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNM 536
            E+LKH+Y+ L+K+FR +FE +     + + DE N +YE+KASAWYQV YHP W+KKSL +
Sbjct: 1086 EKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLEL 1145

Query: 537  KEPDGDGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
            +EPD      +LSF WI ADYLARIKI+ RRT++ D  KP NSLA Y++DR+
Sbjct: 1146 REPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
            gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
            6 [Theobroma cacao]
          Length = 1197

 Score =  316 bits (809), Expect = 6e-84
 Identities = 151/231 (65%), Positives = 183/231 (79%), Gaps = 1/231 (0%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            P +LKPKLYPDFMGKEE++SYKS KILGRLYRHIKD YDEDL  S+E +    DI YD D
Sbjct: 967  PANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDVYDEDLSESSEINLDSPDINYDTD 1026

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            LEV+GSAD++ DAW  KCSY  QL  L+GQYKV REEE+VTGH+WSMPKY S+K G+L+E
Sbjct: 1027 LEVTGSADYIDDAWVKKCSYDRQLIGLLGQYKVKREEEVVTGHIWSMPKYTSRKLGDLKE 1086

Query: 363  RLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNMK 539
            +L H+Y ALRKEFR +FE MDS + + + DE N +YE+KASAWYQVTYHP+WV+K L ++
Sbjct: 1087 KLGHSYGALRKEFRQIFESMDSEIEQLNEDERNELYERKASAWYQVTYHPKWVEKKLELQ 1146

Query: 540  EPDGDGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
            + DG    ++LSFAWI ADYLARIKIR + T  VD  KP NSL KY+AD+I
Sbjct: 1147 KSDGADPVVMLSFAWIAADYLARIKIRSQGTGNVDFSKPVNSLVKYLADKI 1197


>gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidopsis thaliana]
          Length = 1196

 Score =  310 bits (793), Expect = 4e-82
 Identities = 147/233 (63%), Positives = 182/233 (78%), Gaps = 3/233 (1%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            P HLKPKLYPDFMGKE++++YKSNKILGRLYR +K+ YDED   S+E+S  P  IPYD  
Sbjct: 966  PFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRPVKEVYDEDAEASSEESTDPSAIPYDAV 1025

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            LE+ G  D + +AW +KCSY GQL  L+GQYKV +EEEIVTGH+WSMPKY SKKQGEL+E
Sbjct: 1026 LEIPGFEDLIPEAWGHKCSYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKE 1085

Query: 363  RLKHAYNALRKEFRLLFEKM---DSNLGENSVDENRMYEQKASAWYQVTYHPEWVKKSLN 533
            RLKH+YN+L+KEFR +FE+      NL E   ++N +YE+KASAWY VTYHPEWVKKSL 
Sbjct: 1086 RLKHSYNSLKKEFRKVFEETIPDHENLSEE--EKNILYEKKASAWYHVTYHPEWVKKSLE 1143

Query: 534  MKEPDGDGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
            +++PD      +LSFAWI ADYLARIKIR R   ++DS KP +SLAK++A R+
Sbjct: 1144 LQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196


>ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer
            arietinum] gi|502132369|ref|XP_004501326.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X3 [Cicer
            arietinum]
          Length = 1201

 Score =  309 bits (791), Expect = 7e-82
 Identities = 151/238 (63%), Positives = 185/238 (77%), Gaps = 8/238 (3%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            PPHLKPKLYPDFMGKE  +SYKS KILGRLYR IKDAYD+D + + + +    DI YD D
Sbjct: 965  PPHLKPKLYPDFMGKEHHQSYKSKKILGRLYRQIKDAYDKD-IDAPDLNCASSDIHYDTD 1023

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            LEV GSADF+ DAW  KCSY GQL+ L+GQYKV  EEE+VTG +WSMPKYNS+KQGEL+E
Sbjct: 1024 LEVPGSADFISDAWYQKCSYDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSRKQGELKE 1083

Query: 363  RLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNMK 539
            RLKH+Y+AL+KEFR  FEK++ ++GE S +E N +YEQKASAWYQV YHP+WVK+S ++K
Sbjct: 1084 RLKHSYSALKKEFRQTFEKLNLDIGELSDEEKNLLYEQKASAWYQVAYHPKWVKRSHDLK 1143

Query: 540  -------EPDGDGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
                   E D  G  ++LSF WI  DYLAR KIR+RR E  DS KP +SLAKY+++R+
Sbjct: 1144 VKSSDNQEADSLGNMVMLSFPWIAVDYLARTKIRRRRVENFDSVKPVDSLAKYLSERL 1201


>ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Cicer
            arietinum]
          Length = 1247

 Score =  309 bits (791), Expect = 7e-82
 Identities = 151/238 (63%), Positives = 185/238 (77%), Gaps = 8/238 (3%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            PPHLKPKLYPDFMGKE  +SYKS KILGRLYR IKDAYD+D + + + +    DI YD D
Sbjct: 1011 PPHLKPKLYPDFMGKEHHQSYKSKKILGRLYRQIKDAYDKD-IDAPDLNCASSDIHYDTD 1069

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            LEV GSADF+ DAW  KCSY GQL+ L+GQYKV  EEE+VTG +WSMPKYNS+KQGEL+E
Sbjct: 1070 LEVPGSADFISDAWYQKCSYDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSRKQGELKE 1129

Query: 363  RLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNMK 539
            RLKH+Y+AL+KEFR  FEK++ ++GE S +E N +YEQKASAWYQV YHP+WVK+S ++K
Sbjct: 1130 RLKHSYSALKKEFRQTFEKLNLDIGELSDEEKNLLYEQKASAWYQVAYHPKWVKRSHDLK 1189

Query: 540  -------EPDGDGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
                   E D  G  ++LSF WI  DYLAR KIR+RR E  DS KP +SLAKY+++R+
Sbjct: 1190 VKSSDNQEADSLGNMVMLSFPWIAVDYLARTKIRRRRVENFDSVKPVDSLAKYLSERL 1247


>ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana]
            gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName:
            Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6;
            AltName: Full=Protein SILENCING DEFECTIVE 1; AltName:
            Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName:
            Full=RNA-directed RNA polymerase 6
            gi|12324444|gb|AAG52184.1|AC012329_11 putative
            RNA-directed RNA polymerase; 73997-69985 [Arabidopsis
            thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA
            polymerase-like protein [Arabidopsis thaliana]
            gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana]
            gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase
            6 [Arabidopsis thaliana]
          Length = 1196

 Score =  308 bits (789), Expect = 1e-81
 Identities = 146/233 (62%), Positives = 181/233 (77%), Gaps = 3/233 (1%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            P HLKPKLYPDFMGKE++++YKSNKILGRLYR +K+ YDED   S+E+S  P  IPYD  
Sbjct: 966  PFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPSAIPYDAV 1025

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            LE+ G  D + +AW +KC Y GQL  L+GQYKV +EEEIVTGH+WSMPKY SKKQGEL+E
Sbjct: 1026 LEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKE 1085

Query: 363  RLKHAYNALRKEFRLLFEKM---DSNLGENSVDENRMYEQKASAWYQVTYHPEWVKKSLN 533
            RLKH+YN+L+KEFR +FE+      NL E   ++N +YE+KASAWY VTYHPEWVKKSL 
Sbjct: 1086 RLKHSYNSLKKEFRKVFEETIPDHENLSEE--EKNILYEKKASAWYHVTYHPEWVKKSLE 1143

Query: 534  MKEPDGDGEKIILSFAWITADYLARIKIRQRRTETVDSDKPKNSLAKYVADRI 692
            +++PD      +LSFAWI ADYLARIKIR R   ++DS KP +SLAK++A R+
Sbjct: 1144 LQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196


>ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris]
            gi|561010117|gb|ESW09024.1| hypothetical protein
            PHAVU_009G093700g [Phaseolus vulgaris]
          Length = 1204

 Score =  308 bits (788), Expect = 2e-81
 Identities = 151/240 (62%), Positives = 190/240 (79%), Gaps = 10/240 (4%)
 Frame = +3

Query: 3    PPHLKPKLYPDFMGKEEFRSYKSNKILGRLYRHIKDAYDEDLVTSAEQSFVPGDIPYDKD 182
            P HLKPKLYPDFMGKE+ +SY+S K+LGRLYR IKDAYDED + +   +FV GDIPYDKD
Sbjct: 966  PYHLKPKLYPDFMGKEKHQSYRSKKVLGRLYRRIKDAYDED-IDAPYLNFVSGDIPYDKD 1024

Query: 183  LEVSGSADFVKDAWDYKCSYAGQLTALMGQYKVSREEEIVTGHVWSMPKYNSKKQGELRE 362
            LEV GS+ F+ D+W+ KC+Y GQL+ L+GQYKV REEE+VTG +WSMPKYNS+KQGEL+E
Sbjct: 1025 LEVPGSSAFIADSWEQKCAYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKE 1084

Query: 363  RLKHAYNALRKEFRLLFEKMDSNLGENSVDE-NRMYEQKASAWYQVTYHPEWVKKSLNM- 536
            RLKH+Y+AL+KEFR  FEK+ S++GE S +E N +YEQKASAWYQVTYHP WVKKSL++ 
Sbjct: 1085 RLKHSYSALKKEFRHTFEKLSSDVGELSEEEKNLLYEQKASAWYQVTYHPYWVKKSLDLQ 1144

Query: 537  ------KEPDGDGEKIILSFAWITADYLARIKIRQ--RRTETVDSDKPKNSLAKYVADRI 692
                  +E D  G  ++LSF WI  DYLAR KIR+  R++   DS KP +SLA Y+++R+
Sbjct: 1145 DKSPESQEADCLGSTVMLSFPWIAVDYLARTKIRERHRKSGNFDSTKPVDSLAMYLSERL 1204