BLASTX nr result
ID: Paeonia25_contig00024681
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Paeonia25_contig00024681 (1260 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like... 441 e-121 ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citr... 436 e-119 ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prun... 436 e-119 ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [... 431 e-118 ref|XP_007031141.1| Pseudouridine synthase family protein isofor... 426 e-116 ref|XP_007031140.1| Pseudouridine synthase family protein isofor... 426 e-116 ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [... 422 e-115 gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis] 412 e-112 ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [... 409 e-111 gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis] 408 e-111 ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like... 404 e-110 ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [... 403 e-109 ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [... 400 e-109 ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 400 e-109 emb|CBI39587.3| unnamed protein product [Vitis vinifera] 389 e-105 gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus... 369 1e-99 ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutr... 369 2e-99 ref|XP_006302538.1| hypothetical protein CARUB_v10020638mg [Caps... 365 3e-98 ref|XP_002894642.1| pseudouridine synthase family protein [Arabi... 361 4e-97 dbj|BAK01967.1| predicted protein [Hordeum vulgare subsp. vulgare] 360 5e-97 >ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like [Citrus sinensis] Length = 324 Score = 441 bits (1134), Expect = e-121 Identities = 226/324 (69%), Positives = 264/324 (81%), Gaps = 1/324 (0%) Frame = -2 Query: 1118 SDSSSTKDLNTLTNYXXXXXXXXXXXSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLI 939 ++ +S T NY SK IEL+RAMSASS+S LY LSRSDVL+EDEWL+ Sbjct: 5 TEPTSQNAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEWLV 64 Query: 938 VVNKPQGVYCERVLASVPSIL-NDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSG 762 VNKPQGVYCE VLASVP +L DSA+S ++G T+ +L ELHLANRLDRDTSG Sbjct: 65 AVNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEG----TKLNLLELHLANRLDRDTSG 120 Query: 761 VMVITKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAA 582 VMVITKS+KVA+KLVKAFT+HKV+KTYIALCIGPAPKW++ITI SGHGRSK+GAWRVYAA Sbjct: 121 VMVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAA 180 Query: 581 SDVGRALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKK 402 SDVGR LPGGSVVRDM T FEVLSVNG+GSFK+ S+ ++D++NN I+VE+K+V ++D KK Sbjct: 181 SDVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEDEENN-IVVEKKAVLDADAKK 239 Query: 401 DEVLVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHP 222 +E+LVR FPRSGRTHQIRLHCQYLGI IRGDVKYEGVYEW GK +DGHELHAESLSL HP Sbjct: 240 NEILVRVFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSLEHP 299 Query: 221 VTDLPVVFWAPLPLWASQVLQRIS 150 +T PV+ APLPLWA+Q Q S Sbjct: 300 ITGCPVMVQAPLPLWATQAPQSSS 323 >ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citrus clementina] gi|567881937|ref|XP_006433527.1| hypothetical protein CICLE_v10001637mg [Citrus clementina] gi|557535648|gb|ESR46766.1| hypothetical protein CICLE_v10001637mg [Citrus clementina] gi|557535649|gb|ESR46767.1| hypothetical protein CICLE_v10001637mg [Citrus clementina] Length = 357 Score = 436 bits (1121), Expect = e-119 Identities = 232/366 (63%), Positives = 275/366 (75%), Gaps = 6/366 (1%) Frame = -2 Query: 1229 LTSKPSLFSVKPI-----SATVRYVCYSFPLPTMSDSDQTHLSDSSSTKDLNTLTNYXXX 1065 +T PSL S P R+ F L +M + + ++ + NY Sbjct: 1 MTQMPSLSSFHPTFTFAPKGVPRFRKTFFSLASMLNPTEPTCENAPQIQQ-----NYPTP 55 Query: 1064 XXXXXXXXSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLASVP 885 SK IEL+RAMSASS+S LY LSRSDVL+EDEW + VNKPQGVYCE VLASVP Sbjct: 56 LSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEWFVAVNKPQGVYCESVLASVP 115 Query: 884 SIL-NDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAKLVKAF 708 L DSA+S ++G T+ +L ELHLANRLDRDTSGVMVITKS+KVA+KLVKAF Sbjct: 116 CFLAGDSAESKSGRLSEG----TKLNLLELHLANRLDRDTSGVMVITKSHKVASKLVKAF 171 Query: 707 TNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVVRDMET 528 T+HKV+KTYIALCIGPAPKW++ITI SGHGRSK+GAWRVYAASDVGR LPGGSVVRDM T Sbjct: 172 TDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGRVLPGGSVVRDMVT 231 Query: 527 KFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGRTHQIR 348 FEVLSVNG+GSFK+ S+ ++ ++NN I+VE+K+V ++D KK+E+LVRAFPRSGRTHQIR Sbjct: 232 SFEVLSVNGEGSFKEPSELQEHEENN-IVVEKKAVLDADAKKNEILVRAFPRSGRTHQIR 290 Query: 347 LHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLPLWASQ 168 LHCQYLGI IRGDVKYEGVYEW GK +DGHELHAESLS +HPVT PV+ APLPLW ++ Sbjct: 291 LHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSFDHPVTGCPVMVQAPLPLWGTE 350 Query: 167 VLQRIS 150 LQ S Sbjct: 351 ALQSSS 356 >ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica] gi|462401230|gb|EMJ06787.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica] Length = 316 Score = 436 bits (1121), Expect = e-119 Identities = 219/317 (69%), Positives = 257/317 (81%) Frame = -2 Query: 1109 SSTKDLNTLTNYXXXXXXXXXXXSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVN 930 SS L T NY SK IEL+RAMSASS+S L++LSR DV+FED+WLIVVN Sbjct: 11 SSQNALQTSQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFEDQWLIVVN 70 Query: 929 KPQGVYCERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVI 750 KPQGVYCE VL SVP +L DSA+S T ++ ELHLANRLDRDTSG+MVI Sbjct: 71 KPQGVYCESVLESVPQLLCDSAES-----------GTPANQLELHLANRLDRDTSGLMVI 119 Query: 749 TKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVG 570 TKS+KVA+KLVKAFT+HK++KTYIA CIG APKWE+IT+ SGHGRSK+GAWRVYAASDVG Sbjct: 120 TKSHKVASKLVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVG 179 Query: 569 RALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVL 390 R LPGGS+VRDMET FEVLS+NG+GS K+ S+ +KD+ N+I+V+EK+V + D KKDE+L Sbjct: 180 RTLPGGSMVRDMETSFEVLSINGQGSLKEPSEFKKDEA-NTIVVQEKAVIDKDTKKDEIL 238 Query: 389 VRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDL 210 VRA PRSGRTHQIRLHCQYLGI IRGDVKYEGVYEW+G+T+DGHELHAESLS HP+T L Sbjct: 239 VRARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITGL 298 Query: 209 PVVFWAPLPLWASQVLQ 159 PV+F AP+P WASQ LQ Sbjct: 299 PVMFQAPVPSWASQALQ 315 >ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis] gi|223548464|gb|EEF49955.1| ribosomal pseudouridine synthase, putative [Ricinus communis] Length = 321 Score = 431 bits (1108), Expect = e-118 Identities = 220/318 (69%), Positives = 255/318 (80%), Gaps = 1/318 (0%) Frame = -2 Query: 1109 SSTKDLNTLTNYXXXXXXXXXXXSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVN 930 +S D TL NY SKQIEL+RA+SASSRS L+TLSRSDVL+ED+WLI VN Sbjct: 11 TSQNDPLTLQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIAVN 70 Query: 929 KPQGVYCERVLASVPSILNDSAD-SDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMV 753 KPQGVYCE VL SVP +L SA+ +D A+G+ E HLANRLDRDTSGVMV Sbjct: 71 KPQGVYCETVLESVPRVLAASAELTDPSEGAEGNPH-------EFHLANRLDRDTSGVMV 123 Query: 752 ITKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDV 573 ITKS+KVA+KLVKAFT+HK+ KTYIALCIG APKWEKITI SGHGRSK+G WRVYAASDV Sbjct: 124 ITKSHKVASKLVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDV 183 Query: 572 GRALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEV 393 G+ LPGGS V+DMET FE+LSVNG+GSFK++S+ KD+ N ++VEEK+ N+DVKK E+ Sbjct: 184 GQTLPGGSTVKDMETSFELLSVNGQGSFKELSEFEKDE--NILVVEEKAAKNADVKKVEI 241 Query: 392 LVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTD 213 LVRAFP+SGRTHQIRLHCQYLGI IRGDVKYEGVYEWEG+T+DGHELHAE+LS HPVT Sbjct: 242 LVRAFPQSGRTHQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTG 301 Query: 212 LPVVFWAPLPLWASQVLQ 159 +PV+ APLP WA Q Q Sbjct: 302 VPVMLRAPLPSWAIQASQ 319 >ref|XP_007031141.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao] gi|508719746|gb|EOY11643.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao] Length = 313 Score = 426 bits (1094), Expect = e-116 Identities = 213/314 (67%), Positives = 253/314 (80%) Frame = -2 Query: 1091 NTLTNYXXXXXXXXXXXSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVY 912 N+ NY SK IEL+RAM+ASS+S L+ LSRSD+L+EDEWLI VNKPQG+Y Sbjct: 6 NSHQNYPTPLSPPLPSISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAVNKPQGIY 65 Query: 911 CERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKV 732 C+ VLAS+P L+DS SDR ++ + Q+S ELHLANRLDRDTSG+MVITKS+KV Sbjct: 66 CDSVLASIPRFLSDSTVSDRLSDGN------QASPFELHLANRLDRDTSGIMVITKSHKV 119 Query: 731 AAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGG 552 AA LVKAFTNH V+KTY+A CIG APK E+ITI SGHGRSK+GAWRVYAA DVGR LPGG Sbjct: 120 AAALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGG 179 Query: 551 SVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPR 372 S+VRDM T FEVLS+NG+ S+K+ S+ KD++ S+IVEEK+V + D +KDE+LVRAFPR Sbjct: 180 SIVRDMGTTFEVLSINGQQSYKEPSESVKDEE-TSVIVEEKAVIDVDAQKDEILVRAFPR 238 Query: 371 SGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWA 192 SGRTHQIRLHCQYLGIPIRGDVKYEGVYEW+G+ +D HELHAESLS HPVT PV+ A Sbjct: 239 SGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSFQHPVTGFPVMIQA 298 Query: 191 PLPLWASQVLQRIS 150 PLPLWASQ LQ ++ Sbjct: 299 PLPLWASQALQPLT 312 >ref|XP_007031140.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao] gi|508719745|gb|EOY11642.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao] Length = 345 Score = 426 bits (1094), Expect = e-116 Identities = 213/314 (67%), Positives = 253/314 (80%) Frame = -2 Query: 1091 NTLTNYXXXXXXXXXXXSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVY 912 N+ NY SK IEL+RAM+ASS+S L+ LSRSD+L+EDEWLI VNKPQG+Y Sbjct: 38 NSHQNYPTPLSPPLPSISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAVNKPQGIY 97 Query: 911 CERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKV 732 C+ VLAS+P L+DS SDR ++ + Q+S ELHLANRLDRDTSG+MVITKS+KV Sbjct: 98 CDSVLASIPRFLSDSTVSDRLSDGN------QASPFELHLANRLDRDTSGIMVITKSHKV 151 Query: 731 AAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGG 552 AA LVKAFTNH V+KTY+A CIG APK E+ITI SGHGRSK+GAWRVYAA DVGR LPGG Sbjct: 152 AAALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGG 211 Query: 551 SVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPR 372 S+VRDM T FEVLS+NG+ S+K+ S+ KD++ S+IVEEK+V + D +KDE+LVRAFPR Sbjct: 212 SIVRDMGTTFEVLSINGQQSYKEPSESVKDEE-TSVIVEEKAVIDVDAQKDEILVRAFPR 270 Query: 371 SGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWA 192 SGRTHQIRLHCQYLGIPIRGDVKYEGVYEW+G+ +D HELHAESLS HPVT PV+ A Sbjct: 271 SGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSFQHPVTGFPVMIQA 330 Query: 191 PLPLWASQVLQRIS 150 PLPLWASQ LQ ++ Sbjct: 331 PLPLWASQALQPLT 344 >ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [Fragaria vesca subsp. vesca] Length = 347 Score = 422 bits (1084), Expect = e-115 Identities = 214/355 (60%), Positives = 261/355 (73%), Gaps = 3/355 (0%) Frame = -2 Query: 1214 SLFSVKPISATVRY---VCYSFPLPTMSDSDQTHLSDSSSTKDLNTLTNYXXXXXXXXXX 1044 SL ++P++ V + SFP P T SS L NY Sbjct: 3 SLLVLQPVNVFVFFNPKTLTSFPKPFNFLRSVTMSDQPSSQNALQISQNYPVPLSPPLPL 62 Query: 1043 XSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLASVPSILNDSA 864 SK +EL+RAMSASS+S L+TLSR+DV++ED+WLIVVNKPQG+YCE VL SVP +L +S Sbjct: 63 ISKNMELARAMSASSKSSLFTLSRNDVVYEDQWLIVVNKPQGIYCETVLESVPKLLAESG 122 Query: 863 DSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAKLVKAFTNHKVNKT 684 + PE+HLANRLDRDTSGVM+ITKS+KVAAKLVKAFT+HKV+KT Sbjct: 123 --------------LEGKAPEIHLANRLDRDTSGVMIITKSHKVAAKLVKAFTDHKVSKT 168 Query: 683 YIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVVRDMETKFEVLSVN 504 YIA CIG APKWE+IT+ SGHGRSK+GAWRVYAASDVGR LPGGSVVRDMET FE+LS+N Sbjct: 169 YIACCIGSAPKWERITVKSGHGRSKFGAWRVYAASDVGRPLPGGSVVRDMETSFEILSIN 228 Query: 503 GKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGRTHQIRLHCQYLGI 324 G+G F++ S+ R DD ++ E+ + + D KKDE+LV A PRSGRTHQIRLHCQYLGI Sbjct: 229 GQGCFREPSEFRIDDDKILVVEEKAVIIDGDAKKDEILVIARPRSGRTHQIRLHCQYLGI 288 Query: 323 PIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLPLWASQVLQ 159 IRGDVKYEGVYEW+G T+ GHELHAES+SL+HP+T LP++F APLP WA+Q++Q Sbjct: 289 SIRGDVKYEGVYEWKGTTYGGHELHAESMSLDHPITGLPILFRAPLPSWANQLIQ 343 >gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis] Length = 319 Score = 412 bits (1058), Expect = e-112 Identities = 208/318 (65%), Positives = 250/318 (78%) Frame = -2 Query: 1109 SSTKDLNTLTNYXXXXXXXXXXXSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVN 930 +S L T NY SK +ELSRAMSASS+S L+++SR+D +FEDE L+ VN Sbjct: 11 TSQNALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVN 70 Query: 929 KPQGVYCERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVI 750 KPQG+YCE V SV +L+DS++ + T++S PELHLANRLDRDTSG+M+I Sbjct: 71 KPQGIYCESVFDSVRKVLSDSSEPGQLE--------TEASPPELHLANRLDRDTSGLMLI 122 Query: 749 TKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVG 570 TKS+KVA+KLVKAFT HKV+KTYIA C+G APKWE ITI SGHGRSK+GAWRVYAASDVG Sbjct: 123 TKSHKVASKLVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVG 182 Query: 569 RALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVL 390 R LPGGSVVRDMET FEVLSVNG+ K+ S+ RKD NN +IVEEK++ + D KKDE+L Sbjct: 183 RTLPGGSVVRDMETSFEVLSVNGQRVSKEPSEFRKDG-NNVLIVEEKALIDRDGKKDEIL 241 Query: 389 VRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDL 210 VRA P+SGR+HQIRLHCQYLGI +RGDVKYEGV +W+GKT++GHELHAESLS HP+T L Sbjct: 242 VRARPKSGRSHQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSL 301 Query: 209 PVVFWAPLPLWASQVLQR 156 PVV PLP+WASQV Q+ Sbjct: 302 PVVLSTPLPMWASQVTQQ 319 >ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera] Length = 348 Score = 409 bits (1052), Expect = e-111 Identities = 221/368 (60%), Positives = 264/368 (71%) Frame = -2 Query: 1250 PFQSTLSLTSKPSLFSVKPISATVRYVCYSFPLPTMSDSDQTHLSDSSSTKDLNTLTNYX 1071 P +L L S S ++ I+A VR + S P TM++ D +S LTNY Sbjct: 2 PLSPSLCLRSSLSP-NLPTITAAVRSLGASLPHTTMAE-----YIDPNSKDAPQILTNYP 55 Query: 1070 XXXXXXXXXXSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLAS 891 SK IE SRAMSASSRS L++L RSD+LFED+WL+ VNKPQGVYCE +L S Sbjct: 56 KPISPPLPAISKHIEQSRAMSASSRSSLFSLCRSDILFEDQWLMAVNKPQGVYCETILLS 115 Query: 890 VPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAKLVKA 711 V +L+DS DGH S LHLANRLDRDTSGVMVITKS++VAAKL+KA Sbjct: 116 VSRMLDDS---------DGHD-----SCRSLHLANRLDRDTSGVMVITKSHQVAAKLMKA 161 Query: 710 FTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVVRDME 531 F++ KV KTY+ALCIG AP WEKITI SGHGRSK+GAWRVYAASDVGRALP ++DM Sbjct: 162 FSDRKVTKTYLALCIGAAPTWEKITIKSGHGRSKFGAWRVYAASDVGRALPNAPAIKDMV 221 Query: 530 TKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGRTHQI 351 T FEVLSVNG+G+ K++ + RK D+ ++VEE+SV +S+ ++DE+LVRAFPRSGRTHQI Sbjct: 222 TSFEVLSVNGQGNVKELPESRKADE-TVLVVEERSVIDSNARQDEILVRAFPRSGRTHQI 280 Query: 350 RLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLPLWAS 171 RLHCQYLGI IRGDVKYEGV+EW+GK +DGHELHAESLS HPVT + V F APLP WA Sbjct: 281 RLHCQYLGISIRGDVKYEGVHEWKGKIYDGHELHAESLSFEHPVTGVDVAFRAPLPSWAV 340 Query: 170 QVLQRISH 147 Q LQ H Sbjct: 341 QALQPSPH 348 >gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis] Length = 319 Score = 408 bits (1048), Expect = e-111 Identities = 207/318 (65%), Positives = 249/318 (78%) Frame = -2 Query: 1109 SSTKDLNTLTNYXXXXXXXXXXXSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVN 930 +S L T NY SK +ELSRAMSASS+S L+++SR+D +FEDE L+ VN Sbjct: 11 TSQNALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVN 70 Query: 929 KPQGVYCERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVI 750 KPQG+YCE V SV +L+DS++ + T++S PELHLANRLDRDTSG+M+I Sbjct: 71 KPQGIYCESVFDSVRKVLSDSSEPGQLE--------TEASPPELHLANRLDRDTSGLMLI 122 Query: 749 TKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVG 570 TKS+KVA+KLVKAFT HKV+KTYIA C+G APKWE ITI SGHGRSK+GAWRVYAASDVG Sbjct: 123 TKSHKVASKLVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVG 182 Query: 569 RALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVL 390 R LPGGSVVRDMET FEVLSVNG+ K+ S+ RKD NN +IVEEK++ + D KKDE+L Sbjct: 183 RTLPGGSVVRDMETSFEVLSVNGQRVSKEPSEFRKDG-NNVLIVEEKALIDRDGKKDEIL 241 Query: 389 VRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDL 210 VRA P+SGR+HQIRLHCQYLGI +RGDVKYEGV +W+GKT++GHELHAESLS HP+T L Sbjct: 242 VRARPKSGRSHQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSL 301 Query: 209 PVVFWAPLPLWASQVLQR 156 VV PLP+WASQV Q+ Sbjct: 302 LVVLSTPLPMWASQVTQQ 319 >ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like [Solanum tuberosum] Length = 332 Score = 404 bits (1039), Expect = e-110 Identities = 201/305 (65%), Positives = 238/305 (78%) Frame = -2 Query: 1082 TNYXXXXXXXXXXXSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCER 903 T+Y SK IE +RA++ASS+S L++LSRS V+FEDEW+I VNKPQG+YCE Sbjct: 45 TDYPVPLSPPLPALSKDIEPNRALTASSKSALFSLSRSHVIFEDEWIIAVNKPQGIYCES 104 Query: 902 VLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAK 723 VL+S+P +LND T +++ ELHLANRLDRDTSGVM+ITK +KVAAK Sbjct: 105 VLSSLPDLLND----------------TGANVSELHLANRLDRDTSGVMLITKLHKVAAK 148 Query: 722 LVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVV 543 VKAFT+HKV KTY+A C+G APKWEKIT+ SGHGRSKYGAWRVYAASD GR LPGGS+V Sbjct: 149 FVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAASDAGRKLPGGSLV 208 Query: 542 RDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGR 363 +DMET FEVLSVNG G FK+VSD KD+ + +IV+EKSV D+KKDE+LVRA PRSGR Sbjct: 209 KDMETSFEVLSVNGLGCFKEVSDFHKDE--DVVIVQEKSVIGCDLKKDEILVRASPRSGR 266 Query: 362 THQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLP 183 THQIRLHCQYLGIPIRGDV+YEGVYEW+G +D HELHAESLS HP+T P++ APLP Sbjct: 267 THQIRLHCQYLGIPIRGDVRYEGVYEWKGSRYDSHELHAESLSFEHPITGKPMLLQAPLP 326 Query: 182 LWASQ 168 WA Q Sbjct: 327 SWAIQ 331 >ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [Solanum lycopersicum] Length = 308 Score = 403 bits (1035), Expect = e-109 Identities = 201/308 (65%), Positives = 239/308 (77%) Frame = -2 Query: 1082 TNYXXXXXXXXXXXSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCER 903 T+Y SK IE +RA++ASS+S L++LSRS V+FEDEW+I VNKPQG+YCE Sbjct: 15 TDYPVPLSPPLPTLSKDIEPNRALTASSKSALFSLSRSHVIFEDEWIIAVNKPQGIYCES 74 Query: 902 VLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAK 723 VL+S+P +LND T +++ ELHLANRLDRDTSGVM+ITK +KVAAK Sbjct: 75 VLSSLPDLLND----------------TGANVSELHLANRLDRDTSGVMLITKLHKVAAK 118 Query: 722 LVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVV 543 VKAFT+HKV KTY+A C+G APKWEKIT+ SGHGRSKYGAWRVYAASD GR LPGGS+V Sbjct: 119 FVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAASDAGRKLPGGSLV 178 Query: 542 RDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGR 363 +DMET FEVLSVNG G FK+VSD KD+ + +IV+EKSV D+KKDE+LVRA PRSGR Sbjct: 179 KDMETSFEVLSVNGLGCFKEVSDLHKDE--DIVIVQEKSVIGCDLKKDEILVRASPRSGR 236 Query: 362 THQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLP 183 THQIRLHCQYLGIPIRGDV+YEGVYEW+G +D HELHAESLS HP+T ++ APLP Sbjct: 237 THQIRLHCQYLGIPIRGDVRYEGVYEWKGNIYDSHELHAESLSFEHPITGKSMLLQAPLP 296 Query: 182 LWASQVLQ 159 WA Q L+ Sbjct: 297 SWAIQPLR 304 >ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus] Length = 366 Score = 400 bits (1029), Expect = e-109 Identities = 206/357 (57%), Positives = 257/357 (71%) Frame = -2 Query: 1217 PSLFSVKPISATVRYVCYSFPLPTMSDSDQTHLSDSSSTKDLNTLTNYXXXXXXXXXXXS 1038 P F+ P + + + + +M+DS + + ST + NY S Sbjct: 15 PKTFTEFPFTKSFCFHRFKSVSNSMTDSSEPVTGNCPSTAE-----NYPVPLSPPLPAIS 69 Query: 1037 KQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLASVPSILNDSADS 858 K +EL+RAM ASS+S LY LS +DV++EDEWLI VNKPQG+YCE VLA+VP +L DSA++ Sbjct: 70 KNLELARAMVASSKSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVPRLLGDSANA 129 Query: 857 DRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAKLVKAFTNHKVNKTYI 678 ++SLPELHLANRLDRDTSGVMVITKS+KVA+KLVKAFT+H V+K+YI Sbjct: 130 -----------GIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYI 178 Query: 677 ALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVVRDMETKFEVLSVNGK 498 A C+G +PKW+KI + SGHGRSK+G WRVYAA+DVGR+LPGGSVVRDMET FEVLSVNGK Sbjct: 179 AFCVGTSPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGK 238 Query: 497 GSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGRTHQIRLHCQYLGIPI 318 + +++ R+ ++ +I+V KS+ + D KDE+L+RA PRSGRTHQIRLHCQYLGIPI Sbjct: 239 NTMEELQKFRRGEE-ETIVVHTKSLVDIDSHKDEILIRARPRSGRTHQIRLHCQYLGIPI 297 Query: 317 RGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLPLWASQVLQRISH 147 RGDVKYEGV EW K +D HELHAESL HPVT +P+ APLP WASQ LQ H Sbjct: 298 RGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQH 354 >ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like [Cucumis sativus] Length = 366 Score = 400 bits (1027), Expect = e-109 Identities = 206/357 (57%), Positives = 256/357 (71%) Frame = -2 Query: 1217 PSLFSVKPISATVRYVCYSFPLPTMSDSDQTHLSDSSSTKDLNTLTNYXXXXXXXXXXXS 1038 P F+ P + + + + +M+DS + + ST + NY S Sbjct: 15 PKTFTEFPFTKSFCFHRFKSVSNSMTDSSEPVTGNCPSTAE-----NYPVPLSPPLPAIS 69 Query: 1037 KQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLASVPSILNDSADS 858 K +EL+RAM ASS+S LY LS +DV++EDEWLI VNKPQG+YCE VLA+VP +L DSA++ Sbjct: 70 KNLELARAMVASSKSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVPRLLGDSANA 129 Query: 857 DRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAKLVKAFTNHKVNKTYI 678 ++SLPELHLANRLDRDTSGVMVITKS+KVA+KLVKAFT+H V+K+YI Sbjct: 130 -----------GIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYI 178 Query: 677 ALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVVRDMETKFEVLSVNGK 498 A C+G +PKW KI + SGHGRSK+G WRVYAA+DVGR+LPGGSVVRDMET FEVLSVNGK Sbjct: 179 AFCVGTSPKWXKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGK 238 Query: 497 GSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGRTHQIRLHCQYLGIPI 318 + +++ R+ ++ +I+V KS+ + D KDE+L+RA PRSGRTHQIRLHCQYLGIPI Sbjct: 239 NTMEELQKFRRGEE-ETIVVHTKSLVDIDSHKDEILIRARPRSGRTHQIRLHCQYLGIPI 297 Query: 317 RGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLPLWASQVLQRISH 147 RGDVKYEGV EW K +D HELHAESL HPVT +P+ APLP WASQ LQ H Sbjct: 298 RGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQH 354 >emb|CBI39587.3| unnamed protein product [Vitis vinifera] Length = 274 Score = 389 bits (999), Expect = e-105 Identities = 195/289 (67%), Positives = 230/289 (79%) Frame = -2 Query: 1013 MSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLASVPSILNDSADSDRRNEADG 834 MSASSRS L++L RSD+LFED+WL+ VNKPQGVYCE +L SV +L+DS DG Sbjct: 1 MSASSRSSLFSLCRSDILFEDQWLMAVNKPQGVYCETILLSVSRMLDDS---------DG 51 Query: 833 HSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAKLVKAFTNHKVNKTYIALCIGPAP 654 H S LHLANRLDRDTSGVMVITKS++VAAKL+KAF++ KV KTY+ALCIG AP Sbjct: 52 HD-----SCRSLHLANRLDRDTSGVMVITKSHQVAAKLMKAFSDRKVTKTYLALCIGAAP 106 Query: 653 KWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVVRDMETKFEVLSVNGKGSFKKVSD 474 WEKITI SGHGRSK+GAWRVYAASDVGRALP ++DM T FEVLSVNG+G+ K++ + Sbjct: 107 TWEKITIKSGHGRSKFGAWRVYAASDVGRALPNAPAIKDMVTSFEVLSVNGQGNVKELPE 166 Query: 473 PRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEG 294 RK D+ ++VEE+SV +S+ ++DE+LVRAFPRSGRTHQIRLHCQYLGI IRGDVKYEG Sbjct: 167 SRKADE-TVLVVEERSVIDSNARQDEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEG 225 Query: 293 VYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLPLWASQVLQRISH 147 V+EW+GK +DGHELHAESLS HPVT + V F APLP WA Q LQ H Sbjct: 226 VHEWKGKIYDGHELHAESLSFEHPVTGVDVAFRAPLPSWAVQALQPSPH 274 >gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus guttatus] Length = 323 Score = 369 bits (948), Expect = 1e-99 Identities = 189/311 (60%), Positives = 226/311 (72%), Gaps = 2/311 (0%) Frame = -2 Query: 1088 TLTNYXXXXXXXXXXXSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYC 909 +L NY SK +EL+RA++ASS+S L++LSR DVLFEDEWLI VNKP G+YC Sbjct: 20 SLQNYPVPLSPPPPLISKNVELNRALTASSKSSLFSLSRKDVLFEDEWLIAVNKPNGIYC 79 Query: 908 ERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVA 729 E +L+SV +LN Q L ELHL+NRLDRDTSGV++ITKS+KVA Sbjct: 80 ETILSSVQILLNTD----------------QVKLQELHLSNRLDRDTSGVILITKSHKVA 123 Query: 728 AKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGS 549 AKLVKAFTNH V KTY+A C+G PKW+ + I SGHGRSK+GAWRVYA SDVGR LPGGS Sbjct: 124 AKLVKAFTNHMVKKTYLASCVGTFPKWKNMIIKSGHGRSKHGAWRVYAYSDVGRVLPGGS 183 Query: 548 VVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNS--DVKKDEVLVRAFP 375 VRDMET F+VLSVNGK S + SD +++ + E+ V S ++DEV+VRA P Sbjct: 184 FVRDMETSFDVLSVNGK-SCSQESDANHEEEEKIVAEEKSEVVGSCCSDERDEVVVRAHP 242 Query: 374 RSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFW 195 RSGRTHQIRLHCQYLGIPI GDVKYEGVYEW+ +T++GHELHAE+LS HP+T V Sbjct: 243 RSGRTHQIRLHCQYLGIPIIGDVKYEGVYEWKDRTYEGHELHAETLSFEHPITGQSVFIQ 302 Query: 194 APLPLWASQVL 162 APLPLWASQ L Sbjct: 303 APLPLWASQAL 313 >ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutrema salsugineum] gi|557088941|gb|ESQ29721.1| hypothetical protein EUTSA_v10023586mg [Eutrema salsugineum] Length = 333 Score = 369 bits (946), Expect = 2e-99 Identities = 201/361 (55%), Positives = 240/361 (66%) Frame = -2 Query: 1253 FPFQSTLSLTSKPSLFSVKPISATVRYVCYSFPLPTMSDSDQTHLSDSSSTKDLNTLTNY 1074 F F S LT S+K + A LPT D++Q NY Sbjct: 13 FSFSSNTKLTKPYFAVSIKAMEARN-------DLPTTVDTNQ----------------NY 49 Query: 1073 XXXXXXXXXXXSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLA 894 SK IEL RAM ASS+S L+ L+R+DVL+EDEWL+ VNKP+G+YCE VL+ Sbjct: 50 PKPISAPPPPISKDIELKRAMEASSKSSLFNLTRNDVLYEDEWLMAVNKPKGIYCESVLS 109 Query: 893 SVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAKLVK 714 S P ++ DS+ S+ E HLANRLDRDTSGVM+ITKS+KVAAKLVK Sbjct: 110 SAPKVIVDSS----------------STANEFHLANRLDRDTSGVMLITKSHKVAAKLVK 153 Query: 713 AFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVVRDM 534 AFT HK+ K+YIALCIG +P W KIT+ SGHGRSK+GAWRVYAA DVGR LPGGS VRDM Sbjct: 154 AFTEHKIRKSYIALCIGSSPNWSKITVRSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDM 213 Query: 533 ETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGRTHQ 354 ET FEV+SVNG + ++P + + S+IV E S V D V+VRAFPRSGRTHQ Sbjct: 214 ETTFEVVSVNG-----EKTEPLEVE---SVIVVEGEPGLSCVGDDVVVVRAFPRSGRTHQ 265 Query: 353 IRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLPLWA 174 IRLHC+YLGIPIRGDVKY G+YEW G+TF+GHELHAESLS +HPVT P+V APLP W Sbjct: 266 IRLHCRYLGIPIRGDVKYHGMYEWRGRTFEGHELHAESLSFDHPVTGEPIVIRAPLPCWV 325 Query: 173 S 171 + Sbjct: 326 A 326 >ref|XP_006302538.1| hypothetical protein CARUB_v10020638mg [Capsella rubella] gi|565489799|ref|XP_006302539.1| hypothetical protein CARUB_v10020638mg [Capsella rubella] gi|482571248|gb|EOA35436.1| hypothetical protein CARUB_v10020638mg [Capsella rubella] gi|482571249|gb|EOA35437.1| hypothetical protein CARUB_v10020638mg [Capsella rubella] Length = 329 Score = 365 bits (936), Expect = 3e-98 Identities = 195/320 (60%), Positives = 228/320 (71%), Gaps = 4/320 (1%) Frame = -2 Query: 1118 SDSSSTKDLNTLTNYXXXXXXXXXXXSKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLI 939 S ++T +LN NY SK IEL RAM ASS+S LY L+R DVL+EDE L+ Sbjct: 29 SMEATTSELNL--NYPKPISSPPPPISKDIELKRAMEASSKSSLYNLTRDDVLYEDEHLM 86 Query: 938 VVNKPQGVYCERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGV 759 VNKP+GVYCE VL S P I+ DS+ E HLANRLDRDTSGV Sbjct: 87 AVNKPKGVYCEAVLRSAPQIVLDSSS-------------------EFHLANRLDRDTSGV 127 Query: 758 MVITKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAAS 579 M+ITKS+KVAAKLVKAFT HK+ K+YIALCIG +P W K+T+SSGHGRSK+GAWRVY+A Sbjct: 128 MIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWSKVTVSSGHGRSKHGAWRVYSAL 187 Query: 578 DVGRALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDD--KNNSIIVEEKSVTNSDVK 405 DVGR LPGGS VRDMET FEV+SVNG S D K + + S++V E S + Sbjct: 188 DVGRVLPGGSFVRDMETTFEVVSVNGVKSESCEVDGVKTESCEVESVVVVEGKREVSSCE 247 Query: 404 KDE--VLVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSL 231 D+ V+VRAFPRSGRTHQIRLHCQYLGIPIRGDVKY G YEW G+TF+GHELHAE LSL Sbjct: 248 GDDVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYHGRYEWCGRTFEGHELHAECLSL 307 Query: 230 NHPVTDLPVVFWAPLPLWAS 171 +HPVTD P+VF AP+P WA+ Sbjct: 308 DHPVTDEPIVFRAPVPCWAA 327 >ref|XP_002894642.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp. lyrata] gi|297340484|gb|EFH70901.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp. lyrata] Length = 321 Score = 361 bits (926), Expect = 4e-97 Identities = 192/335 (57%), Positives = 231/335 (68%), Gaps = 2/335 (0%) Frame = -2 Query: 1166 YSFPLPTMSDSDQTHLSDSSSTKDLNTLTN--YXXXXXXXXXXXSKQIELSRAMSASSRS 993 +SF + T S + + + S+ + + N Y SK IEL RAM ASS+S Sbjct: 8 FSFSISTNSILTKPYFAISTKAMEATSELNLHYPKPISPPPPPISKDIELRRAMEASSKS 67 Query: 992 GLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLASVPSILNDSADSDRRNEADGHSRATQS 813 L+ L+R VL+EDE+L+ VNKP+GVYCE VL S P I+ DS+ Sbjct: 68 SLFNLTRDHVLYEDEYLMAVNKPKGVYCEAVLRSAPQIVLDSSS---------------- 111 Query: 812 SLPELHLANRLDRDTSGVMVITKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITI 633 E HLANRLDRDTSGVM+ITKS+KVAAKLVKAFT HK+ K+YIALCIG +P W KIT+ Sbjct: 112 ---EFHLANRLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRKITV 168 Query: 632 SSGHGRSKYGAWRVYAASDVGRALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKN 453 SSGHGRSK+GAWRVYAA DVGR LPGGS VRDMET FEV+SVNG + + + Sbjct: 169 SSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVNGVET--------ESCEV 220 Query: 452 NSIIVEEKSVTNSDVKKDEVLVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGK 273 ++IV E+ S D V+VRAFPRSGRTHQIRLHCQYLGI IRGDVKY G+YEW G+ Sbjct: 221 ENVIVVEREQELSCAGDDVVVVRAFPRSGRTHQIRLHCQYLGISIRGDVKYHGMYEWRGR 280 Query: 272 TFDGHELHAESLSLNHPVTDLPVVFWAPLPLWASQ 168 TF+GHELHAE LSL+HPVTD P+V APLP WA++ Sbjct: 281 TFEGHELHAECLSLDHPVTDDPIVIRAPLPCWATR 315 >dbj|BAK01967.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 346 Score = 360 bits (925), Expect = 5e-97 Identities = 188/295 (63%), Positives = 217/295 (73%), Gaps = 3/295 (1%) Frame = -2 Query: 1037 KQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLASVPSILNDSADS 858 K +EL RAM+AS+RSG Y S + V+FEDEWL VV+KP GVYCE +L+++P S D Sbjct: 65 KDVELRRAMTASARSGAY--SSAAVVFEDEWLAVVDKPAGVYCEALLSALPCSTASSGDP 122 Query: 857 DRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAKLVKAFTNHKVNKTYI 678 SS P LHLANRLDRDTSG+MVITK NKVAAKLVKAFT HKV KTY+ Sbjct: 123 --------------SSKPNLHLANRLDRDTSGLMVITKCNKVAAKLVKAFTEHKVKKTYL 168 Query: 677 ALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVVRDMETKFEVLSVNGK 498 ALCIG P WEK+ + SGHGRSK+GAWRVYA SDVGR LPGGS VRDM TKFEVL +GK Sbjct: 169 ALCIGYLPAWEKVKVCSGHGRSKHGAWRVYAMSDVGRTLPGGSSVRDMSTKFEVLGTDGK 228 Query: 497 GSFKKVSDPRKDDKNNSIIVEEKS---VTNSDVKKDEVLVRAFPRSGRTHQIRLHCQYLG 327 G +++ S+ DD SI V+EK+ +N DVK V VRA+P+SGRTHQIRLHCQYLG Sbjct: 229 GQYREPSNVDIDD-IESITVQEKAADQTSNVDVKSHMVFVRAYPQSGRTHQIRLHCQYLG 287 Query: 326 IPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLPLWASQVL 162 IPIRGDVKY GV EW G DGH LHAESLS HPVT LPV F APLP WA++++ Sbjct: 288 IPIRGDVKYGGVIEWNGVDCDGHALHAESLSFVHPVTGLPVTFQAPLPSWANEII 342