BLASTX nr result

ID: Paeonia25_contig00024652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00024652
         (376 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007038473.1| Cleavage and polyadenylation specificity fac...   224   1e-56
gb|EXC20897.1| Cleavage and polyadenylation specificity factor s...   224   1e-56
ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prun...   223   3e-56
ref|XP_004514987.1| PREDICTED: cleavage and polyadenylation spec...   218   5e-55
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec...   218   9e-55
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   218   9e-55
emb|CBI24510.3| unnamed protein product [Vitis vinifera]              217   2e-54
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   217   2e-54
ref|XP_007152397.1| hypothetical protein PHAVU_004G126600g [Phas...   216   2e-54
ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation spec...   215   6e-54
ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation spec...   215   6e-54
ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citr...   215   6e-54
ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citr...   215   6e-54
ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec...   213   2e-53
ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation spec...   212   4e-53
ref|XP_002318462.2| cleavage and polyadenylation specificity fac...   212   5e-53
dbj|BAB11613.1| cleavage and polyadenylation specificity factor ...   211   6e-53
ref|NP_199979.2| cleavage and polyadenylation specificity factor...   211   6e-53
gb|AAN41460.1| putative cleavage and polyadenylation specificity...   211   6e-53
ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutr...   211   8e-53

>ref|XP_007038473.1| Cleavage and polyadenylation specificity factor 160 isoform 1
           [Theobroma cacao] gi|508775718|gb|EOY22974.1| Cleavage
           and polyadenylation specificity factor 160 isoform 1
           [Theobroma cacao]
          Length = 1457

 Score =  224 bits (571), Expect = 1e-56
 Identities = 108/124 (87%), Positives = 115/124 (92%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVC+YRLHGNVE+MAVLSIGGGDG RRRDSIILAF+DAKISVLEFDDS+HGLRT+SMH
Sbjct: 101 LELVCNYRLHGNVESMAVLSIGGGDGSRRRDSIILAFKDAKISVLEFDDSIHGLRTTSMH 160

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGPEWLHLKRGRESFARGPLVK DPQGRC GVLVY LQMIILK +QAGSG VG+DDA 
Sbjct: 161 CFEGPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYDLQMIILKASQAGSGFVGEDDAF 220

Query: 16  NSGG 5
            SGG
Sbjct: 221 GSGG 224


>gb|EXC20897.1| Cleavage and polyadenylation specificity factor subunit 1 [Morus
           notabilis]
          Length = 1479

 Score =  224 bits (570), Expect = 1e-56
 Identities = 107/124 (86%), Positives = 116/124 (93%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNV+T+AVLS GGGDG RRRDSIIL+FQDAKISVLEFDDS+HGLRTSSMH
Sbjct: 103 LELVCHYRLHGNVQTIAVLSSGGGDGSRRRDSIILSFQDAKISVLEFDDSIHGLRTSSMH 162

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGPEWL+LKRGRESFARGPLVK DPQGRCAGVL Y +QMI+LK AQAGSGLVG++DAL
Sbjct: 163 CFEGPEWLYLKRGRESFARGPLVKVDPQGRCAGVLAYNIQMIMLKAAQAGSGLVGEEDAL 222

Query: 16  NSGG 5
            SGG
Sbjct: 223 GSGG 226


>ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prunus persica]
           gi|462416772|gb|EMJ21509.1| hypothetical protein
           PRUPE_ppa000211mg [Prunus persica]
          Length = 1459

 Score =  223 bits (567), Expect = 3e-56
 Identities = 106/124 (85%), Positives = 112/124 (90%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNV TMAVLS GGGDG RRRDSIIL F+DAKISVLEFDDS+HGLRTSSMH
Sbjct: 103 LELVCHYRLHGNVVTMAVLSSGGGDGSRRRDSIILTFEDAKISVLEFDDSIHGLRTSSMH 162

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGPEWLHL+RGRESFARGPLVK DPQGRC  +LVYGLQMIILK +Q GSGLVGDDD+ 
Sbjct: 163 CFEGPEWLHLRRGRESFARGPLVKVDPQGRCGSILVYGLQMIILKASQGGSGLVGDDDSF 222

Query: 16  NSGG 5
            SGG
Sbjct: 223 GSGG 226


>ref|XP_004514987.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Cicer arietinum]
          Length = 1447

 Score =  218 bits (556), Expect = 5e-55
 Identities = 103/124 (83%), Positives = 112/124 (90%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNVE++AVLS+GGGD  RRRDSIIL F+DAKISVLE+DDS+HGLRTSS+H
Sbjct: 99  LELVCHYRLHGNVESVAVLSVGGGDASRRRDSIILTFKDAKISVLEYDDSIHGLRTSSLH 158

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGPEWLHLKRGRE FARGP+ K DPQGRC GVLVY LQMIILKT QAGSGLVG+DD L
Sbjct: 159 CFEGPEWLHLKRGREHFARGPVAKVDPQGRCGGVLVYDLQMIILKTTQAGSGLVGEDDVL 218

Query: 16  NSGG 5
            SGG
Sbjct: 219 GSGG 222


>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Glycine max]
          Length = 1447

 Score =  218 bits (554), Expect = 9e-55
 Identities = 104/124 (83%), Positives = 111/124 (89%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNVETMAVLSIGGGD  RRRDSI+L F DAKISVLE+DDS+HGLRTSS+H
Sbjct: 97  LELVCHYRLHGNVETMAVLSIGGGDVSRRRDSIMLTFADAKISVLEYDDSIHGLRTSSLH 156

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGPEWLHLKRGRE FARGP+VK DPQGRC GVL+Y LQMIILK  QAGSGLVG+DDAL
Sbjct: 157 CFEGPEWLHLKRGREQFARGPVVKVDPQGRCGGVLIYDLQMIILKATQAGSGLVGEDDAL 216

Query: 16  NSGG 5
            S G
Sbjct: 217 GSSG 220


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
           [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
           and polyadenylation specificity factor cpsf, putative
           [Ricinus communis]
          Length = 1461

 Score =  218 bits (554), Expect = 9e-55
 Identities = 104/124 (83%), Positives = 112/124 (90%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNVE+M VL   GGD  RRRDSIILAF+DAKISVLEFDDS+HGLRTSSMH
Sbjct: 102 LELVCHYRLHGNVESMVVLPTEGGDSSRRRDSIILAFKDAKISVLEFDDSIHGLRTSSMH 161

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGPEWLHLKRGRESFARGPL+K DPQGRC G+LVY +QMIIL+ AQA SGLVGDDDAL
Sbjct: 162 CFEGPEWLHLKRGRESFARGPLLKVDPQGRCGGILVYDMQMIILRAAQASSGLVGDDDAL 221

Query: 16  NSGG 5
           +SGG
Sbjct: 222 SSGG 225


>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  217 bits (552), Expect = 2e-54
 Identities = 105/123 (85%), Positives = 111/123 (90%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVC YRLHGNVETM VL  GGGD  RRRDSIILAFQDAKISVLEFDDS+HGLRTSSMH
Sbjct: 101 LELVCQYRLHGNVETMTVLPSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMH 160

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGPEW HLKRG ESFARGPLVK DPQGRC+GVLVYGLQMIILK +QAG GLVGD++AL
Sbjct: 161 CFEGPEWFHLKRGHESFARGPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEAL 220

Query: 16  NSG 8
           +SG
Sbjct: 221 SSG 223


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Vitis vinifera]
          Length = 1442

 Score =  217 bits (552), Expect = 2e-54
 Identities = 105/123 (85%), Positives = 111/123 (90%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVC YRLHGNVETM VL  GGGD  RRRDSIILAFQDAKISVLEFDDS+HGLRTSSMH
Sbjct: 101 LELVCQYRLHGNVETMTVLPSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMH 160

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGPEW HLKRG ESFARGPLVK DPQGRC+GVLVYGLQMIILK +QAG GLVGD++AL
Sbjct: 161 CFEGPEWFHLKRGHESFARGPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEAL 220

Query: 16  NSG 8
           +SG
Sbjct: 221 SSG 223


>ref|XP_007152397.1| hypothetical protein PHAVU_004G126600g [Phaseolus vulgaris]
           gi|561025706|gb|ESW24391.1| hypothetical protein
           PHAVU_004G126600g [Phaseolus vulgaris]
          Length = 1445

 Score =  216 bits (551), Expect = 2e-54
 Identities = 103/124 (83%), Positives = 109/124 (87%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNVETMAVLSIGGGD  R+RDSIIL F DAKISVLE+DDS+HGLRTSS+H
Sbjct: 95  LELVCHYRLHGNVETMAVLSIGGGDASRKRDSIILTFADAKISVLEYDDSIHGLRTSSLH 154

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGPEWLHLKRGRE FARGP+VK DPQGRC G L+Y LQMIILK  QAGSGLVGDDDAL
Sbjct: 155 CFEGPEWLHLKRGREQFARGPVVKVDPQGRCGGTLIYDLQMIILKATQAGSGLVGDDDAL 214

Query: 16  NSGG 5
              G
Sbjct: 215 GFSG 218


>ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like isoform X2 [Citrus sinensis]
          Length = 1457

 Score =  215 bits (547), Expect = 6e-54
 Identities = 102/124 (82%), Positives = 110/124 (88%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNVE++A+LS GG D  RRRDSIILAF+DAKISVLEFDDS+HGLR +SMH
Sbjct: 101 LELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMH 160

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FE PEWLHLKRGRESFARGPLVK DPQGRC GVLVYGLQMIILK +Q GSGLVGD+D  
Sbjct: 161 CFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTF 220

Query: 16  NSGG 5
            SGG
Sbjct: 221 GSGG 224


>ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like isoform X1 [Citrus sinensis]
          Length = 1458

 Score =  215 bits (547), Expect = 6e-54
 Identities = 102/124 (82%), Positives = 110/124 (88%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNVE++A+LS GG D  RRRDSIILAF+DAKISVLEFDDS+HGLR +SMH
Sbjct: 101 LELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMH 160

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FE PEWLHLKRGRESFARGPLVK DPQGRC GVLVYGLQMIILK +Q GSGLVGD+D  
Sbjct: 161 CFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTF 220

Query: 16  NSGG 5
            SGG
Sbjct: 221 GSGG 224


>ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
           gi|557523633|gb|ESR35000.1| hypothetical protein
           CICLE_v10004147mg [Citrus clementina]
          Length = 1457

 Score =  215 bits (547), Expect = 6e-54
 Identities = 102/124 (82%), Positives = 110/124 (88%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNVE++A+LS GG D  RRRDSIILAF+DAKISVLEFDDS+HGLR +SMH
Sbjct: 101 LELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMH 160

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FE PEWLHLKRGRESFARGPLVK DPQGRC GVLVYGLQMIILK +Q GSGLVGD+D  
Sbjct: 161 CFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTF 220

Query: 16  NSGG 5
            SGG
Sbjct: 221 GSGG 224


>ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
           gi|557523632|gb|ESR34999.1| hypothetical protein
           CICLE_v10004147mg [Citrus clementina]
          Length = 1458

 Score =  215 bits (547), Expect = 6e-54
 Identities = 102/124 (82%), Positives = 110/124 (88%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNVE++A+LS GG D  RRRDSIILAF+DAKISVLEFDDS+HGLR +SMH
Sbjct: 101 LELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMH 160

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FE PEWLHLKRGRESFARGPLVK DPQGRC GVLVYGLQMIILK +Q GSGLVGD+D  
Sbjct: 161 CFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTF 220

Query: 16  NSGG 5
            SGG
Sbjct: 221 GSGG 224


>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like isoform X1 [Glycine max]
          Length = 1449

 Score =  213 bits (543), Expect = 2e-53
 Identities = 102/124 (82%), Positives = 108/124 (87%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LEL CHYRLHGNVETMAVLSIGGGD  R+RDSIIL F DAKISVLE+DDS+HGLRTSS+H
Sbjct: 99  LELECHYRLHGNVETMAVLSIGGGDVSRKRDSIILTFADAKISVLEYDDSIHGLRTSSLH 158

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGPEWLHLKRGRE FARGP+VK DPQGRC GVL+Y LQMIILK  Q GSGLVGDDDA 
Sbjct: 159 CFEGPEWLHLKRGREQFARGPVVKIDPQGRCGGVLIYDLQMIILKATQVGSGLVGDDDAF 218

Query: 16  NSGG 5
            S G
Sbjct: 219 GSSG 222


>ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Fragaria vesca subsp. vesca]
          Length = 1439

 Score =  212 bits (540), Expect = 4e-53
 Identities = 102/123 (82%), Positives = 108/123 (87%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNV TMAVLS GGGDG +RRD+IIL F+DAKISVLEFDDS+HGLRTSSMH
Sbjct: 103 LELVCHYRLHGNVMTMAVLSSGGGDGSKRRDAIILTFEDAKISVLEFDDSIHGLRTSSMH 162

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGPEWLHL+RGRESFARGP VK DPQGRC GVLVY LQ+IILK AQ G GLVGDDD  
Sbjct: 163 CFEGPEWLHLRRGRESFARGPSVKVDPQGRCGGVLVYDLQLIILKAAQGGYGLVGDDDGF 222

Query: 16  NSG 8
            SG
Sbjct: 223 ASG 225


>ref|XP_002318462.2| cleavage and polyadenylation specificity factor family protein
           [Populus trichocarpa] gi|550326263|gb|EEE96682.2|
           cleavage and polyadenylation specificity factor family
           protein [Populus trichocarpa]
          Length = 1455

 Score =  212 bits (539), Expect = 5e-53
 Identities = 103/123 (83%), Positives = 109/123 (88%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNVE+M VLS+ GGD  RRRDSIILAF+DAKISVLEFDDS+HGLRTSSMH
Sbjct: 101 LELVCHYRLHGNVESMGVLSVEGGDDSRRRDSIILAFKDAKISVLEFDDSIHGLRTSSMH 160

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGP+W HLKRGRESFARGPLVK DPQGRC GVLVY LQMIILK AQAGS LV D+DA 
Sbjct: 161 CFEGPDWRHLKRGRESFARGPLVKVDPQGRCGGVLVYDLQMIILKAAQAGSALVQDEDAF 220

Query: 16  NSG 8
            SG
Sbjct: 221 GSG 223


>dbj|BAB11613.1| cleavage and polyadenylation specificity factor subunit
           [Arabidopsis thaliana]
          Length = 1448

 Score =  211 bits (538), Expect = 6e-53
 Identities = 100/124 (80%), Positives = 111/124 (89%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNVE++AVL +GGG+  + RDSIIL F+DAKISVLEFDDS+H LR +SMH
Sbjct: 104 LELVCHYRLHGNVESIAVLPMGGGNSSKGRDSIILTFRDAKISVLEFDDSIHSLRMTSMH 163

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGP+WLHLKRGRESF RGPLVK DPQGRC GVLVYGLQMIILKT+Q GSGLVGDDDA 
Sbjct: 164 CFEGPDWLHLKRGRESFPRGPLVKVDPQGRCGGVLVYGLQMIILKTSQVGSGLVGDDDAF 223

Query: 16  NSGG 5
           +SGG
Sbjct: 224 SSGG 227


>ref|NP_199979.2| cleavage and polyadenylation specificity factor subunit 1
           [Arabidopsis thaliana]
           gi|290457637|sp|Q9FGR0.2|CPSF1_ARATH RecName:
           Full=Cleavage and polyadenylation specificity factor
           subunit 1; AltName: Full=Cleavage and polyadenylation
           specificity factor 160 kDa subunit; Short=AtCPSF160;
           Short=CPSF 160 kDa subunit gi|332008729|gb|AED96112.1|
           cleavage and polyadenylation specificity factor subunit
           1 [Arabidopsis thaliana]
          Length = 1442

 Score =  211 bits (538), Expect = 6e-53
 Identities = 100/124 (80%), Positives = 111/124 (89%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNVE++AVL +GGG+  + RDSIIL F+DAKISVLEFDDS+H LR +SMH
Sbjct: 104 LELVCHYRLHGNVESIAVLPMGGGNSSKGRDSIILTFRDAKISVLEFDDSIHSLRMTSMH 163

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGP+WLHLKRGRESF RGPLVK DPQGRC GVLVYGLQMIILKT+Q GSGLVGDDDA 
Sbjct: 164 CFEGPDWLHLKRGRESFPRGPLVKVDPQGRCGGVLVYGLQMIILKTSQVGSGLVGDDDAF 223

Query: 16  NSGG 5
           +SGG
Sbjct: 224 SSGG 227


>gb|AAN41460.1| putative cleavage and polyadenylation specificity factor 160 kDa
           subunit [Arabidopsis thaliana]
          Length = 1442

 Score =  211 bits (538), Expect = 6e-53
 Identities = 100/124 (80%), Positives = 111/124 (89%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNVE++AVL +GGG+  + RDSIIL F+DAKISVLEFDDS+H LR +SMH
Sbjct: 104 LELVCHYRLHGNVESIAVLPMGGGNSSKGRDSIILTFRDAKISVLEFDDSIHSLRMTSMH 163

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGP+WLHLKRGRESF RGPLVK DPQGRC GVLVYGLQMIILKT+Q GSGLVGDDDA 
Sbjct: 164 CFEGPDWLHLKRGRESFPRGPLVKVDPQGRCGGVLVYGLQMIILKTSQVGSGLVGDDDAF 223

Query: 16  NSGG 5
           +SGG
Sbjct: 224 SSGG 227


>ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutrema salsugineum]
           gi|557103022|gb|ESQ43385.1| hypothetical protein
           EUTSA_v10012441mg [Eutrema salsugineum]
          Length = 1445

 Score =  211 bits (537), Expect = 8e-53
 Identities = 99/124 (79%), Positives = 111/124 (89%)
 Frame = -1

Query: 376 LELVCHYRLHGNVETMAVLSIGGGDGCRRRDSIILAFQDAKISVLEFDDSVHGLRTSSMH 197
           LELVCHYRLHGNVE++AVL +GGG+  + RDSI+L F+DAKISVLEFDDS+HGLR +SMH
Sbjct: 105 LELVCHYRLHGNVESLAVLPMGGGNSSKGRDSIVLTFRDAKISVLEFDDSIHGLRMNSMH 164

Query: 196 SFEGPEWLHLKRGRESFARGPLVKADPQGRCAGVLVYGLQMIILKTAQAGSGLVGDDDAL 17
            FEGP+WLHLKRGRESFARGPLVK DPQGRC GVLVYGLQMIILK +QAG GLVGDDD  
Sbjct: 165 CFEGPDWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQAGFGLVGDDDPF 224

Query: 16  NSGG 5
           +SGG
Sbjct: 225 SSGG 228


Top