BLASTX nr result

ID: Paeonia25_contig00024119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00024119
         (299 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007012490.1| RING/U-box superfamily protein, putative [Th...    61   1e-07
ref|XP_002309447.1| zinc finger family protein [Populus trichoca...    59   9e-07

>ref|XP_007012490.1| RING/U-box superfamily protein, putative [Theobroma cacao]
           gi|508782853|gb|EOY30109.1| RING/U-box superfamily
           protein, putative [Theobroma cacao]
          Length = 181

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
 Frame = +1

Query: 97  MGFSVMEDPGLVVTHVLYKAALVLAIIRWILSWALKVXXXXXXXXXXXAAHVPCSS---- 264
           MGF V EDPGL+VTH+LYK A+VLA++RW+LSW L+            +   P SS    
Sbjct: 1   MGFFV-EDPGLIVTHLLYKTAVVLAVLRWVLSWVLRFRDISFFTTSSDSQRNPSSSSPLV 59

Query: 265 ---WVSDHLSLTTF 297
               + D L LTTF
Sbjct: 60  SLQMIRDSLVLTTF 73


>ref|XP_002309447.1| zinc finger family protein [Populus trichocarpa]
           gi|118483893|gb|ABK93837.1| unknown [Populus
           trichocarpa] gi|222855423|gb|EEE92970.1| zinc finger
           family protein [Populus trichocarpa]
          Length = 168

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
 Frame = +1

Query: 97  MGFSVMEDPGLVVTHVLYKAALVLAIIRWILSWAL----KVXXXXXXXXXXXAAH-VPCS 261
           MGF V E+ GL+VTH+LYKAALVLA++RW L+WAL    +             +H VP S
Sbjct: 1   MGFFV-EESGLIVTHLLYKAALVLAVLRWALAWALRFKNRTHLASPSNDSLRRSHPVPSS 59

Query: 262 SWVSDHLSLTTF 297
             + D L LTTF
Sbjct: 60  QQIRDGLILTTF 71


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