BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00020056
         (489 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   130   2e-28
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              129   3e-28
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              129   3e-28
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              129   3e-28
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   128   7e-28
emb|CAN71828.1| hypothetical protein VITISV_020654 [Vitis vinifera]   127   1e-27
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   125   8e-27
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              124   1e-26
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   124   1e-26
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   124   2e-26
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     121   9e-26
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        121   1e-25
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               121   1e-25
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                121   1e-25
ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group] g...   120   1e-25
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]   120   3e-25
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...   119   3e-25
gb|AFB73911.1| polyprotein [Citrus sinensis]                          119   3e-25
gb|AFB73912.1| polyprotein [Citrus sinensis]                          119   4e-25
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   119   4e-25

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  130 bits (327), Expect = 2e-28
 Identities = 65/158 (41%), Positives = 97/158 (61%), Gaps = 1/158 (0%)
 Frame = -1

Query: 489 GRGRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEEKISNREKISSSANMASANYEDS 310
           G  +SK R + + EC  CHEKGH K DCPKL+          +EK+   AN+A     D 
Sbjct: 157 GMSKSKGRAVAKDECAFCHEKGHWKKDCPKLQK---------KEKVLQDANVAECK-SDV 206

Query: 309 DDDLALTVTCDEDP-IHGWVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFKVAGV 133
           + D++L V+      +  W+LDSGCT H+CP +D+F  ++ ++ G V   +    K  G+
Sbjct: 207 ESDISLIVSLSASLYLDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGI 266

Query: 132 GSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKG 19
           GSIK++ HDG  R++++VR+VP LK+NLIS+  L+SKG
Sbjct: 267 GSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKG 304


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  129 bits (325), Expect = 3e-28
 Identities = 75/165 (45%), Positives = 105/165 (63%), Gaps = 4/165 (2%)
 Frame = -1

Query: 483 GRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEEKISNREKISSSANMASANYEDSDD 304
           GRSKSR  K ++CY C  KGHVK +C  +K   N EK  N E  +S   +AS +  D  +
Sbjct: 218 GRSKSRRKKNIKCYGCGMKGHVKKECWNIKK--NGEK--NSEASTSQGCVASTS--DDGE 271

Query: 303 DL---ALTVTCDEDPIHG-WVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFKVAG 136
            L   A T +  E  ++  W++DSG T H+ P++D+F SYE + +GSV   +  A ++AG
Sbjct: 272 ILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAG 331

Query: 135 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTE 1
           VG+I++K+HDG VR ++ VRHV GLK+NL+SV  LD  G KI TE
Sbjct: 332 VGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTE 376


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  129 bits (325), Expect = 3e-28
 Identities = 75/165 (45%), Positives = 105/165 (63%), Gaps = 4/165 (2%)
 Frame = -1

Query: 483 GRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEEKISNREKISSSANMASANYEDSDD 304
           GRSKSR  K ++CY C  KGHVK +C  +K   N EK  N E  +S   +AS +  D  +
Sbjct: 218 GRSKSRRKKNIKCYGCGMKGHVKKECWNIKK--NGEK--NSEASTSQGCVASTS--DDGE 271

Query: 303 DL---ALTVTCDEDPIHG-WVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFKVAG 136
            L   A T +  E  ++  W++DSG T H+ P++D+F SYE + +GSV   +  A ++AG
Sbjct: 272 ILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAG 331

Query: 135 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTE 1
           VG+I++K+HDG VR ++ VRHV GLK+NL+SV  LD  G KI TE
Sbjct: 332 VGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTE 376


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  129 bits (325), Expect = 3e-28
 Identities = 75/165 (45%), Positives = 105/165 (63%), Gaps = 4/165 (2%)
 Frame = -1

Query: 483 GRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEEKISNREKISSSANMASANYEDSDD 304
           GRSKSR  K ++CY C  KGHVK +C  +K   N EK  N E  +S   +AS +  D  +
Sbjct: 218 GRSKSRRKKNIKCYGCGMKGHVKKECWNIKK--NGEK--NSEASTSQGCVASTS--DDGE 271

Query: 303 DL---ALTVTCDEDPIHG-WVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFKVAG 136
            L   A T +  E  ++  W++DSG T H+ P++D+F SYE + +GSV   +  A ++AG
Sbjct: 272 ILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAG 331

Query: 135 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTE 1
           VG+I++K+HDG VR ++ VRHV GLK+NL+SV  LD  G KI TE
Sbjct: 332 VGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTE 376


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  128 bits (322), Expect = 7e-28
 Identities = 72/164 (43%), Positives = 102/164 (62%), Gaps = 6/164 (3%)
 Frame = -1

Query: 486 RGRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEE---KISNREKISSSANMASANYE 316
           RGRSKSR  +   C  C   GH   DC KL++    +   K   +++    A +A+ N  
Sbjct: 166 RGRSKSRG-RYKSCKYCKRGGHDISDCWKLQNKEKHKGNYKPKGKQEEQGKAAVATDNKP 224

Query: 315 DSDDDLALT---VTCDEDPIHGWVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFK 145
           D++  +A      T DE     W+LD+GCT H+CPN+D+F++YE V+ G+VL  D    K
Sbjct: 225 DAELLVAYAGCVQTSDE-----WLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCK 279

Query: 144 VAGVGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYK 13
           VAGVG+I+IK+ DG +R + +VRH+P LKRNLIS+S LD KGY+
Sbjct: 280 VAGVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLDRKGYR 323


>emb|CAN71828.1| hypothetical protein VITISV_020654 [Vitis vinifera]
          Length = 281

 Score =  127 bits (320), Expect = 1e-27
 Identities = 72/166 (43%), Positives = 97/166 (58%), Gaps = 4/166 (2%)
 Frame = -1

Query: 486 RGRSKSRNLKEVECYVCHEKGHVKYDCPKL----KSFLNEEKISNREKISSSANMASANY 319
           R RSKSRN K   C    ++GH+K +C KL    K  +  +K    EK S  A+     Y
Sbjct: 31  RSRSKSRN-KVKTCKYXKKEGHIKXECYKLQNKDKRVIANQKGKQPEK-SDEASATEGKY 88

Query: 318 EDSDDDLALTVTCDEDPIHGWVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFKVA 139
            D +  L +    +  P   W+LDS C  H+C N+D+FS+YE V  G VL  +  + K+A
Sbjct: 89  NDGE--LLIVSDGNSKPCEDWILDSSCMFHMCLNRDWFSTYETVFKGVVLMGNNASCKIA 146

Query: 138 GVGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTE 1
             G+++IK+ DGVV+ + NVRHVP LKRNLI +S LDSKGYK   E
Sbjct: 147 SNGTVRIKMFDGVVKTLGNVRHVPDLKRNLILLSTLDSKGYKYTGE 192


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score =  125 bits (313), Expect = 8e-27
 Identities = 70/163 (42%), Positives = 102/163 (62%), Gaps = 5/163 (3%)
 Frame = -1

Query: 486 RGRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEEKISNREKISSSANMASANYEDSD 307
           RGRSKSR  K   C  C +K H   +C KL+   N+EK   R+    ++ + SA   DS 
Sbjct: 225 RGRSKSRGKKF--CKYCKKKNHFIEECWKLQ---NKEK---RKSDGKASVVTSAENSDSG 276

Query: 306 DDLALTVTC----DEDPIHGWVLDSGCTAHVCPNKDYFSSYELVEDGSVLT-ADGKAFKV 142
           D L +   C    DE     W+LD+ C+ H+C N+D+FSSY+ V++G V+   D    ++
Sbjct: 277 DCLVVFAGCVASHDE-----WILDTACSFHICINRDWFSSYKSVQNGDVVRMGDDNPREI 331

Query: 141 AGVGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYK 13
            G+GS++IK HDG+ R +K+VRH+PG+ RNLIS+S LD++GYK
Sbjct: 332 VGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYK 374


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  124 bits (312), Expect = 1e-26
 Identities = 73/165 (44%), Positives = 103/165 (62%), Gaps = 4/165 (2%)
 Frame = -1

Query: 483 GRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEEKISNREKISSSANMASANYEDSDD 304
           GRSKSR    ++CY C  KGHVK +C   K   N EK  N E  +S   +AS +  D  +
Sbjct: 218 GRSKSRRKNNIKCYGCGMKGHVKKECWNNKK--NGEK--NSEATTSQGCVASTS--DDGE 271

Query: 303 DL---ALTVTCDEDPIHG-WVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFKVAG 136
            L   A T +  E  ++  W++DSG T H+ P++D+F SYE + +GSV   +  A ++AG
Sbjct: 272 ILYSEAATSSEGERQLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAG 331

Query: 135 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTE 1
           VG+I++K+HDG VR ++ VRHV GLK+NL+SV  LD  G KI +E
Sbjct: 332 VGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHSE 376


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  124 bits (311), Expect = 1e-26
 Identities = 65/146 (44%), Positives = 91/146 (62%), Gaps = 2/146 (1%)
 Frame = -1

Query: 447 CYVCHEKGHVKYDCPKLKSFLNEEKISNREKISSSANMASANYEDSDDDLALTVTCDEDP 268
           C  C EKGH K+DCPK K      K S ++ +S++      N   S++D+AL    DE  
Sbjct: 225 CNYCKEKGHWKFDCPKKK------KQSEKQSVSAAVAEEDTN---SEEDIALVA--DEHT 273

Query: 267 IHG--WVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFKVAGVGSIKIKLHDGVVR 94
            H   WVLDSG + H+CP +++F++YE V+ GS+  A+    KV G GSIKI+ HDG   
Sbjct: 274 HHSDVWVLDSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFC 333

Query: 93  VMKNVRHVPGLKRNLISVSVLDSKGY 16
            +  VRHVP + +NLIS+S+LDSKG+
Sbjct: 334 TLNEVRHVPLMTKNLISLSLLDSKGF 359


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1175

 Score =  124 bits (310), Expect = 2e-26
 Identities = 68/159 (42%), Positives = 101/159 (63%), Gaps = 1/159 (0%)
 Frame = -1

Query: 486 RGRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEEKISNREKISSSANMASANYEDSD 307
           RGRSKSR  K   C  C +K H   +C KL+   N+EK   R+    ++ + SA+  DS 
Sbjct: 120 RGRSKSRGKKF--CKYCKKKNHFIEECWKLQ---NKEK---RKSDGKASVVTSADNSDSG 171

Query: 306 DDLALTVTCDEDPIHGWVLDSGCTAHVCPNKDYFSSYELVEDGSVLT-ADGKAFKVAGVG 130
           D L + V C       W+LD+ C+ H+C N+D+FSSY+ V++G V+   D    ++ G+G
Sbjct: 172 DCLVVFVVCVSSHDE-WILDTTCSFHICINRDWFSSYKSVQNGDVVRMGDDNPREIVGIG 230

Query: 129 SIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYK 13
           S++IK HDG+ R +K+VRH+P + RNLIS+S LD++GYK
Sbjct: 231 SVQIKTHDGMTRTLKDVRHIPRMARNLISLSTLDAEGYK 269


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  121 bits (304), Expect = 9e-26
 Identities = 64/159 (40%), Positives = 91/159 (57%), Gaps = 1/159 (0%)
 Frame = -1

Query: 486 RGRSKSRNLKEVECYVCHEKGHVKYDCPKLKSF-LNEEKISNREKISSSANMASANYEDS 310
           RGRSKSR  +   C  C   GH   +C KL+       K   + K       A    E S
Sbjct: 133 RGRSKSRG-RYKSCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKS 191

Query: 309 DDDLALTVTCDEDPIHGWVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFKVAGVG 130
           D +L +           W+LD+ CT H+CPN+D+F++YE V+ G+VL  D    +VAG+G
Sbjct: 192 DAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIG 251

Query: 129 SIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYK 13
           +++IK+ DG +R + +VRH+P LKR+LIS+  LD KGYK
Sbjct: 252 TVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYK 290


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  121 bits (303), Expect = 1e-25
 Identities = 64/159 (40%), Positives = 91/159 (57%), Gaps = 1/159 (0%)
 Frame = -1

Query: 486 RGRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEE-KISNREKISSSANMASANYEDS 310
           RGRSKSR  +   C  C   GH    C KL+       K   + K       A    E S
Sbjct: 224 RGRSKSRG-RYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKS 282

Query: 309 DDDLALTVTCDEDPIHGWVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFKVAGVG 130
           D +L +           W+LD+ CT H+CPN+D+F++YE+V+ G+VL  D    +VAG+G
Sbjct: 283 DAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIG 342

Query: 129 SIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYK 13
           +++IK+ DG +R + +VRH+P LKR+LIS+  LD KGYK
Sbjct: 343 TVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYK 381


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  121 bits (303), Expect = 1e-25
 Identities = 64/159 (40%), Positives = 91/159 (57%), Gaps = 1/159 (0%)
 Frame = -1

Query: 486 RGRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEE-KISNREKISSSANMASANYEDS 310
           RGRSKSR  +   C  C   GH    C KL+       K   + K       A    E S
Sbjct: 41  RGRSKSRG-RYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKS 99

Query: 309 DDDLALTVTCDEDPIHGWVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFKVAGVG 130
           D +L +           W+LD+ CT H+CPN+D+F++YE+V+ G+VL  D    +VAG+G
Sbjct: 100 DAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIG 159

Query: 129 SIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYK 13
           +++IK+ DG +R + +VRH+P LKR+LIS+  LD KGYK
Sbjct: 160 TVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYK 198


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  121 bits (303), Expect = 1e-25
 Identities = 64/159 (40%), Positives = 91/159 (57%), Gaps = 1/159 (0%)
 Frame = -1

Query: 486 RGRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEE-KISNREKISSSANMASANYEDS 310
           RGRSKSR  +   C  C   GH    C KL+       K   + K       A    E S
Sbjct: 209 RGRSKSRG-RYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKS 267

Query: 309 DDDLALTVTCDEDPIHGWVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFKVAGVG 130
           D +L +           W+LD+ CT H+CPN+D+F++YE+V+ G+VL  D    +VAG+G
Sbjct: 268 DAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIG 327

Query: 129 SIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYK 13
           +++IK+ DG +R + +VRH+P LKR+LIS+  LD KGYK
Sbjct: 328 TVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYK 366


>ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group]
           gi|255676990|dbj|BAH93480.1| Os06g0316600 [Oryza sativa
           Japonica Group]
          Length = 759

 Score =  120 bits (302), Expect = 1e-25
 Identities = 69/163 (42%), Positives = 100/163 (61%), Gaps = 5/163 (3%)
 Frame = -1

Query: 486 RGRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEEKISNREKISSSANMASANYEDSD 307
           RGRSK R  K   C  C +K H   +C KL+   N+EK   R+    ++ + SA+  DS 
Sbjct: 154 RGRSKPRGKKF--CKYCKKKNHFIEECWKLQ---NKEK---RKYDGKASVVTSADNSDSG 205

Query: 306 DDLALTVTC----DEDPIHGWVLDSGCTAHVCPNKDYFSSYELVEDGSVLT-ADGKAFKV 142
           D L +   C    DE     W+LD+ C+ H+C N+D+FSSY+ V++G V+   D     +
Sbjct: 206 DCLVVFAGCVASHDE-----WILDTACSFHICINRDWFSSYKSVQNGDVVRMGDDNPRGI 260

Query: 141 AGVGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYK 13
            G+GS++IK HDG+ R +K+ RH+PG+ RNLIS+S LDS+GYK
Sbjct: 261 MGIGSVQIKTHDGMTRTLKDARHIPGMARNLISLSTLDSEGYK 303


>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score =  120 bits (300), Expect = 3e-25
 Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 6/164 (3%)
 Frame = -1

Query: 489 GRGRSKSRN-----LKEVECYVCHEKGHVKYDCPKLKSFLNEEKISNREKISSSANMASA 325
           G+ RSKS++      + V+CY C++ G ++  CP            +R++   +    SA
Sbjct: 107 GKSRSKSKSKGKKDYRNVKCYHCNKIGQIRRICP------------DRQQEEKTQAQGSA 154

Query: 324 NYEDSDDDLALTVTCDEDPIHG-WVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAF 148
              D   D    +T   +P H  WVLDSGCT H+CP +D+FSSY+ V  G +L  +  + 
Sbjct: 155 AIIDDGYDSTEVLTIRLNPNHEEWVLDSGCTYHMCPRRDWFSSYQEVNGGKLLLGNNMSC 214

Query: 147 KVAGVGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGY 16
            V G+G++ I +HDG  R +K VRHVP LKRNLIS+  LD  GY
Sbjct: 215 NVVGIGTMAINMHDGKTRTLKEVRHVPDLKRNLISLGTLDKSGY 258


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score =  119 bits (299), Expect = 3e-25
 Identities = 64/159 (40%), Positives = 89/159 (55%), Gaps = 1/159 (0%)
 Frame = -1

Query: 486 RGRSKSRNLKEVECYVCHEKGHVKYDCPKLKSF-LNEEKISNREKISSSANMASANYEDS 310
           RGRSKSR  +   C  C   GH   +C KL+       K   + K       A    E S
Sbjct: 166 RGRSKSRG-RYKSCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAIVTDEKS 224

Query: 309 DDDLALTVTCDEDPIHGWVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFKVAGVG 130
           D +L +           W+LD+ CT H+CPN+D+F++YE V+ G+VL  D    +VAG+G
Sbjct: 225 DAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIG 284

Query: 129 SIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYK 13
            ++IK+ DG +R + +VRH P LKR+LIS+  LD KGYK
Sbjct: 285 IVQIKMFDGCIRTLSDVRHFPNLKRSLISLRTLDRKGYK 323


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  119 bits (299), Expect = 3e-25
 Identities = 65/166 (39%), Positives = 100/166 (60%), Gaps = 4/166 (2%)
 Frame = -1

Query: 486 RGRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEEKISNREKISSSANMASANYEDSD 307
           +GRSK R  K V+CY C +KGHVK +C     + N+++   +E  +S+A    A+  D  
Sbjct: 217 QGRSKFRGKKNVKCYNCGKKGHVKKEC-----WSNQKRREGKEPETSNAQGCVASTSDDG 271

Query: 306 DDL---ALTVTCDEDPIHG-WVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFKVA 139
           + L   A TV+     +   W++DSG T H+   +++F +YE +  GSV   +  A ++A
Sbjct: 272 EILYSEATTVSEGRKRLSDVWLIDSGATWHMTSRREWFHTYEPISGGSVYMGNDHALEIA 331

Query: 138 GVGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTE 1
           G+G+IKIK+ DG +R +  VRHV GLK+NL+S+  +DS GYK   E
Sbjct: 332 GIGTIKIKMFDGTIRTIGEVRHVNGLKKNLLSLGQMDSHGYKTHVE 377


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  119 bits (298), Expect = 4e-25
 Identities = 64/165 (38%), Positives = 98/165 (59%), Gaps = 4/165 (2%)
 Frame = -1

Query: 483 GRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEEKISNREKISSSANMASANYEDSDD 304
           GRSKSR+ K V+CY C +KGHVK +C     + N+++   +E  SS+A    A+  D  +
Sbjct: 218 GRSKSRSKKNVKCYNCGKKGHVKKEC-----WSNQKRREGKEPESSNAQGCVASTSDDGE 272

Query: 303 DLALTVTCDEDPIHG----WVLDSGCTAHVCPNKDYFSSYELVEDGSVLTADGKAFKVAG 136
            L    T   +        W++DSG T H+   +++F +YE +  GSV   +  A ++AG
Sbjct: 273 ILYSEATIVSEGRKRLSDVWLIDSGATWHMTSRREWFHTYEPISGGSVYMGNDHALEIAG 332

Query: 135 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTE 1
           +G+IKIK+ DG +R ++ VRHV GLK+NL+S+  +DS G K   E
Sbjct: 333 IGTIKIKMFDGTIRTIEEVRHVNGLKKNLLSLGQMDSHGCKTHVE 377


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53370655|gb|AAU89150.1| integrase core domain
           containing protein [Oryza sativa Japonica Group]
           gi|108710286|gb|ABF98081.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1322

 Score =  119 bits (298), Expect = 4e-25
 Identities = 68/163 (41%), Positives = 101/163 (61%), Gaps = 5/163 (3%)
 Frame = -1

Query: 486 RGRSKSRNLKEVECYVCHEKGHVKYDCPKLKSFLNEEKISNREKISSSANMASANYEDSD 307
           RGRSKSR  K   C  C +K H   +C KL+   N+EK   R+    ++ + SA   DS 
Sbjct: 225 RGRSKSRGKKF--CKYCKKKNHFIEECWKLQ---NKEK---RKSDGKASVVTSAENSDSG 276

Query: 306 DDLAL----TVTCDEDPIHGWVLDSGCTAHVCPNKDYFSSYELVEDGSVLT-ADGKAFKV 142
           D L +      + DE     W+LD+ C+ H+C N+D+FSSY+ V++  V+   D    ++
Sbjct: 277 DCLVVFAGYVASHDE-----WILDTACSFHICINRDWFSSYKSVQNEDVVRMGDDNPREI 331

Query: 141 AGVGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYK 13
            G+GS++IK HDG+ R +K+VRH+PG+ RNLIS+S LD++GYK
Sbjct: 332 VGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYK 374