BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00016272
         (1448 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly...   649   0.0  
ref|XP_007043300.1| Photosystem II stability/assembly factor, ch...   642   0.0  
ref|XP_004297743.1| PREDICTED: photosystem II stability/assembly...   629   e-178
ref|XP_006437570.1| hypothetical protein CICLE_v10031672mg [Citr...   622   e-176
gb|EXB55168.1| hypothetical protein L484_018094 [Morus notabilis]     622   e-175
ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly...   620   e-175
ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly...   619   e-174
ref|XP_002520925.1| Photosystem II stability/assembly factor HCF...   619   e-174
ref|XP_006847864.1| hypothetical protein AMTR_s00029p00083110 [A...   617   e-174
ref|XP_003607248.1| Photosystem II stability/assembly factor HCF...   612   e-172
ref|XP_002310654.1| hypothetical protein POPTR_0007s07780g [Popu...   611   e-172
gb|AHM26647.1| photosystem II stability/assembly factor protein ...   610   e-172
ref|XP_007131634.1| hypothetical protein PHAVU_011G029800g [Phas...   608   e-171
ref|XP_007222695.1| hypothetical protein PRUPE_ppa006376mg [Prun...   608   e-171
ref|XP_004505712.1| PREDICTED: LOW QUALITY PROTEIN: photosystem ...   601   e-169
ref|XP_006394580.1| hypothetical protein EUTSA_v10004338mg [Eutr...   599   e-169
ref|XP_004966550.1| PREDICTED: photosystem II stability/assembly...   597   e-168
ref|XP_002439075.1| hypothetical protein SORBIDRAFT_10g031120 [S...   597   e-168
ref|NP_197703.1| photosystem II stability/assembly factor HCF136...   595   e-167
ref|XP_006354977.1| PREDICTED: photosystem II stability/assembly...   593   e-167

>ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic [Vitis vinifera]
            gi|297737938|emb|CBI27139.3| unnamed protein product
            [Vitis vinifera]
          Length = 404

 Score =  649 bits (1675), Expect = 0.0
 Identities = 325/407 (79%), Positives = 352/407 (86%), Gaps = 8/407 (1%)
 Frame = -1

Query: 1397 MATLQLTDYSNPSTTALRLKPSLTSVFSTNSHRQCKPHSRFT-------PKASLSRRQLV 1239
            MATLQL+DY NP    + LKPSL S F    HR C   SR          K SL+RR L+
Sbjct: 1    MATLQLSDYCNP---VVALKPSLKSFFIKTDHRNCCGASRVRVVPRACLQKPSLTRRHLL 57

Query: 1238 SQAATFSLTPLVVVFDLPAKSEEAL-SDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGT 1062
            ++ A  S+ PL++  + PAKSEE L S+WERVYLPIDPGVVLLDI+FVPDD +HGFLLGT
Sbjct: 58   AETAAISVAPLILGIEPPAKSEEPLLSEWERVYLPIDPGVVLLDIAFVPDDLSHGFLLGT 117

Query: 1061 RQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESW 882
            RQT++ETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKP+ILLYTSDAGESW
Sbjct: 118  RQTIMETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGESW 177

Query: 881  ERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVS 702
            ERIPLS QLPGD+VYIKATGEKSAEMVTDEGAIYVTSNRGYNW+AA+QETVSATLNRTVS
Sbjct: 178  ERIPLSAQLPGDIVYIKATGEKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTVS 237

Query: 701  SGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGW 522
            SGISGASYYTGTFNTVNRSPDG+YVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGW
Sbjct: 238  SGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGW 297

Query: 521  RADXXXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILL 342
            RAD             LSKG GI+E+FEE+PVQSRGFGILDVGYRS+ EAWAAGGSG+LL
Sbjct: 298  RADGGLWLLVRGGGLYLSKGTGISEDFEEIPVQSRGFGILDVGYRSKEEAWAAGGSGVLL 357

Query: 341  RTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            RTTNGGKTWTRDKAADNIAANLYSVKFI+D KGFVLGNDGVLLR+LG
Sbjct: 358  RTTNGGKTWTRDKAADNIAANLYSVKFIDDTKGFVLGNDGVLLRFLG 404


>ref|XP_007043300.1| Photosystem II stability/assembly factor, chloroplast (HCF136)
            isoform 1 [Theobroma cacao] gi|508707235|gb|EOX99131.1|
            Photosystem II stability/assembly factor, chloroplast
            (HCF136) isoform 1 [Theobroma cacao]
          Length = 411

 Score =  642 bits (1657), Expect = 0.0
 Identities = 329/416 (79%), Positives = 352/416 (84%), Gaps = 17/416 (4%)
 Frame = -1

Query: 1397 MATLQLTDYSNPSTTALRLKPSLTSVFSTNS-HR-QCKPHSRFTPKASL----------- 1257
            M  LQ++D SN       LKPSLTS+FS    HR Q +PH R   KASL           
Sbjct: 3    MPNLQVSDCSN-------LKPSLTSLFSPRFLHRSQTQPHPRLICKASLQQPHHSSSSSP 55

Query: 1256 ---SRRQLVSQAATFSLTPLVV-VFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDD 1089
               +RRQL+SQ A+ SL+   +    LPAKSEE LS+WERVYLPIDPGVVLLDI+FVPDD
Sbjct: 56   TLVNRRQLISQTASLSLSVATLSALQLPAKSEEVLSEWERVYLPIDPGVVLLDIAFVPDD 115

Query: 1088 SNHGFLLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILL 909
             NHGFLLGTRQT+LETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILL
Sbjct: 116  PNHGFLLGTRQTILETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILL 175

Query: 908  YTSDAGESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETV 729
            YTSDAGESWERIPLS QLPGDMVYIKAT EKSAEMVTD+GAIYVTSNRG+NW+AA+QETV
Sbjct: 176  YTSDAGESWERIPLSAQLPGDMVYIKATDEKSAEMVTDQGAIYVTSNRGFNWRAAVQETV 235

Query: 728  SATLNRTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAV 549
            SATLNRTVSSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNRAV
Sbjct: 236  SATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAV 295

Query: 548  ARRIQNMGWRADXXXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAW 369
            ARRIQNMGWRAD             LSKG GITE+FEE+PVQSRGFGILDVGYRS  EAW
Sbjct: 296  ARRIQNMGWRADGGLWLLVRGGGLFLSKGTGITEDFEEIPVQSRGFGILDVGYRSMEEAW 355

Query: 368  AAGGSGILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            AAGGSG+LLRTTNGGK+WTRDKAADNIAANLYSVKFI+D+KGFVLGNDGVLLRYLG
Sbjct: 356  AAGGSGVLLRTTNGGKSWTRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 411


>ref|XP_004297743.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 406

 Score =  629 bits (1623), Expect = e-178
 Identities = 322/403 (79%), Positives = 344/403 (85%), Gaps = 6/403 (1%)
 Frame = -1

Query: 1391 TLQLTDYSNPSTTALRLKPSLTSVFSTNSHRQCKPHS--RFTPKASLSRRQLVSQAATFS 1218
            TLQL      S   L LKPSLTS+F +   R     S  RF P+ASL+RR LVS  A  S
Sbjct: 4    TLQLLSTDFSSNPMLLLKPSLTSLFVSTPPRHFPTTSLPRFIPRASLTRRHLVSDTAALS 63

Query: 1217 LT---PLVVVFDLPAKSEE-ALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTL 1050
            L    PL+    LPAKSEE ALS+WE+V LPIDPGVVLLDI+FVPDD  HGFLLGTRQTL
Sbjct: 64   LALTVPLLGSSALPAKSEEPALSEWEKVSLPIDPGVVLLDIAFVPDDPKHGFLLGTRQTL 123

Query: 1049 LETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIP 870
            LETKDGG +W PRSIPSAEDEDFNYRFN+ISFKGKEGWIVGKPAILL+TSDAG+SWERIP
Sbjct: 124  LETKDGGQSWAPRSIPSAEDEDFNYRFNAISFKGKEGWIVGKPAILLHTSDAGDSWERIP 183

Query: 869  LSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGIS 690
            LS+QLPGDMVYIKATG+KSAEMVTDEGAIYVTSNRGYNWKAA+QETVSATLNRTVSSGIS
Sbjct: 184  LSSQLPGDMVYIKATGDKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGIS 243

Query: 689  GASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADX 510
            GASYYTGTFN VNRSPDG+YVAVSSRGNF+LTWEPGQPYWQPHNR+VARRIQNMGWRAD 
Sbjct: 244  GASYYTGTFNAVNRSPDGSYVAVSSRGNFFLTWEPGQPYWQPHNRSVARRIQNMGWRADG 303

Query: 509  XXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTN 330
                        LSKG GITEEFEEVPVQSRGFGILDVGYRS+ EAWAAGGSGILLRTTN
Sbjct: 304  GLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTN 363

Query: 329  GGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            GGK+W RDKAADNIAANLYSVKFI+D +GFVLGNDGVLLRYLG
Sbjct: 364  GGKSWVRDKAADNIAANLYSVKFIDDNQGFVLGNDGVLLRYLG 406


>ref|XP_006437570.1| hypothetical protein CICLE_v10031672mg [Citrus clementina]
            gi|567890101|ref|XP_006437571.1| hypothetical protein
            CICLE_v10031672mg [Citrus clementina]
            gi|568862130|ref|XP_006484542.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            isoform X1 [Citrus sinensis]
            gi|568862132|ref|XP_006484543.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            isoform X2 [Citrus sinensis] gi|557539766|gb|ESR50810.1|
            hypothetical protein CICLE_v10031672mg [Citrus
            clementina] gi|557539767|gb|ESR50811.1| hypothetical
            protein CICLE_v10031672mg [Citrus clementina]
          Length = 415

 Score =  622 bits (1605), Expect = e-176
 Identities = 314/409 (76%), Positives = 346/409 (84%), Gaps = 21/409 (5%)
 Frame = -1

Query: 1364 PSTTALRLKPSLTSVFST---------------NSHRQCKPHSR--FTPKASLSRRQLVS 1236
            PS   + +KPSL+S+F+                ++ R C   S    +  +SLSRRQ VS
Sbjct: 7    PSEPIMLVKPSLSSLFAPRLSRANAQAQQPRFISTSRACSLPSSDSSSSSSSLSRRQFVS 66

Query: 1235 QAATFSLTPLVV----VFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLL 1068
            Q AT SL+  +     +++ PAKSEEALS WERVY+P+DPGVVLLDI+FVPDD NHGFLL
Sbjct: 67   QTATLSLSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLL 126

Query: 1067 GTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGE 888
            GTRQTLLETKDGG TW PRSIPSAE+EDFNYRFNSISFKGKEGWIVGKPAILL+TSDAGE
Sbjct: 127  GTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGE 186

Query: 887  SWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRT 708
            SWERIPLS+QLPGDMVYIKATGEKSAEMVTDEGAIY+TSNRGYNW+AA+QETVSATLNRT
Sbjct: 187  SWERIPLSSQLPGDMVYIKATGEKSAEMVTDEGAIYITSNRGYNWRAAVQETVSATLNRT 246

Query: 707  VSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNM 528
            VSSGISGASYYTGTFNTVNRSPDG+YVAVSSRGNFYLTW+PGQ +WQPHNRAVARRIQNM
Sbjct: 247  VSSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWQPGQAFWQPHNRAVARRIQNM 306

Query: 527  GWRADXXXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGI 348
            GWRAD             LSKG GITEEFEEVPVQSRGFGILDVGYRSQ EAWAAGGSG+
Sbjct: 307  GWRADGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGGSGV 366

Query: 347  LLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            LL+TTNGGKTW R+KAADNIAANLYSVKFIN++KGFVLGNDGVLL+YLG
Sbjct: 367  LLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYLG 415


>gb|EXB55168.1| hypothetical protein L484_018094 [Morus notabilis]
          Length = 415

 Score =  622 bits (1603), Expect = e-175
 Identities = 320/415 (77%), Positives = 344/415 (82%), Gaps = 19/415 (4%)
 Frame = -1

Query: 1388 LQLTDYSNPSTTALRLKPSLTSVFSTNS-----HRQCKPHSRFTPKAS-----------L 1257
            LQL D S P    + LKPS TS+F  N+      R  +P  RF PKAS           L
Sbjct: 5    LQLPDCSKP---VILLKPSFTSLFFNNTTSPRHFRSSQPPPRFIPKASSSSSSSSSSSLL 61

Query: 1256 SRRQLVSQAATFSLT---PLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDS 1086
             RR+ +++ A  SL+   P +     PAKSE+ALS+WER YLPIDPGVVLLDI+FVPDD 
Sbjct: 62   CRRRFIAETAAVSLSLASPFLGPVQ-PAKSEDALSEWERCYLPIDPGVVLLDIAFVPDDL 120

Query: 1085 NHGFLLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLY 906
            NHGFLLGTRQT+LETKDGGNTWVPRSIPSAEDEDFNYRFNSISF GKEGWIVGKPAILLY
Sbjct: 121  NHGFLLGTRQTILETKDGGNTWVPRSIPSAEDEDFNYRFNSISFIGKEGWIVGKPAILLY 180

Query: 905  TSDAGESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVS 726
            TSDAGE+WERI LS QLPGDMVYIKATGEK AEMVTD+GAIYVTSN+GYNW+AA+QETVS
Sbjct: 181  TSDAGENWERIALSAQLPGDMVYIKATGEKGAEMVTDQGAIYVTSNKGYNWRAAVQETVS 240

Query: 725  ATLNRTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVA 546
            ATLNRTVSSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNRAVA
Sbjct: 241  ATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVA 300

Query: 545  RRIQNMGWRADXXXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWA 366
            RRIQNMGWRAD             LSKG GITE+FEEV VQSRGFGILDVGYRSQ EAWA
Sbjct: 301  RRIQNMGWRADGGLWLLVRGGGLFLSKGTGITEDFEEVAVQSRGFGILDVGYRSQEEAWA 360

Query: 365  AGGSGILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            AGGSGILLRTTNGGK+W RDKAADNIAANLYSVKFI+D+KGFVLGNDGVLLRYLG
Sbjct: 361  AGGSGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 415


>ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Glycine max]
          Length = 393

 Score =  620 bits (1599), Expect = e-175
 Identities = 313/399 (78%), Positives = 340/399 (85%)
 Frame = -1

Query: 1397 MATLQLTDYSNPSTTALRLKPSLTSVFSTNSHRQCKPHSRFTPKASLSRRQLVSQAATFS 1218
            MATL+LT   + STT  R     T  FS N     K  S     +  SRR+ +++ A  S
Sbjct: 1    MATLRLT--FSDSTTLFRPSLPSTRTFSRNRSLIVKASSSEDDFSRSSRRRFIAETAALS 58

Query: 1217 LTPLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTLLETK 1038
            ++    +  L A+SE+ALS+WERVYLPIDPGVVLLDI+FVPDD NHGFLLGTRQT+LETK
Sbjct: 59   VS----LPQLTARSEDALSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILETK 114

Query: 1037 DGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSNQ 858
            DGGNTW PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKP+ILLYTSDAG+SWERIPLS +
Sbjct: 115  DGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSWERIPLSAE 174

Query: 857  LPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASY 678
            LPGDMVYIKATGEKSAEMVTDEGAIYVT+NRGYNW+AA+QETVSATLNRTVSSGISGASY
Sbjct: 175  LPGDMVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASY 234

Query: 677  YTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXX 498
            YTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNRAVARRIQNMGWRAD     
Sbjct: 235  YTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWL 294

Query: 497  XXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTNGGKT 318
                    LSKGKG+TEEFEEVPVQSRGFGILDVGYRS  EAWAAGGSGILLRTTNGGK+
Sbjct: 295  LVRGGGLYLSKGKGLTEEFEEVPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTTNGGKS 354

Query: 317  WTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            W RDKAADNIAANLYSVKFI+++KGFVLGNDGVLLRYLG
Sbjct: 355  WIRDKAADNIAANLYSVKFIDEKKGFVLGNDGVLLRYLG 393


>ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Cucumis sativus]
            gi|449488796|ref|XP_004158174.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            [Cucumis sativus]
          Length = 406

 Score =  619 bits (1596), Expect = e-174
 Identities = 320/409 (78%), Positives = 345/409 (84%), Gaps = 10/409 (2%)
 Frame = -1

Query: 1397 MATLQLTDYSNPSTTALRLKPSLTSVFSTNSHRQCKPH--SRFTPKASL-----SRRQLV 1239
            MATLQ      PS T+  L  S TS   + S  Q  P   S  TPKASL     +RR  V
Sbjct: 1    MATLQ-QQLLKPSWTS-SLFASSTSPRHSLSQPQLLPRTLSSTTPKASLHNSSINRRHFV 58

Query: 1238 SQAA---TFSLTPLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLL 1068
            +  A   + SL+P +     PAKSEE+LS+WER+YLPIDPGVVLLDI+FVPDD NHGFLL
Sbjct: 59   ADTAAAVSLSLSPFIAPVQ-PAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDMNHGFLL 117

Query: 1067 GTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGE 888
            GTRQT+LETKDGG TW PRSIPSAE+EDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGE
Sbjct: 118  GTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGE 177

Query: 887  SWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRT 708
            SWERIPLS QLPGDMVYIKATGEKSAEMVTDEGAIYVTSN+GYNWKAA+QETVSATLNRT
Sbjct: 178  SWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRT 237

Query: 707  VSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNM 528
            VSSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNRA+ARRIQNM
Sbjct: 238  VSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNM 297

Query: 527  GWRADXXXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGI 348
            GWRAD             LSKG GI+EEFEEVPVQSRGFGILDVGYRS+ EAWAAGGSG+
Sbjct: 298  GWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGV 357

Query: 347  LLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            LL+TTNGG++WTRDKAADNIAANLYSVKFIND+KGFVLGNDGVLL+YLG
Sbjct: 358  LLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406


>ref|XP_002520925.1| Photosystem II stability/assembly factor HCF136, chloroplast
            precursor, putative [Ricinus communis]
            gi|223539891|gb|EEF41470.1| Photosystem II
            stability/assembly factor HCF136, chloroplast precursor,
            putative [Ricinus communis]
          Length = 397

 Score =  619 bits (1595), Expect = e-174
 Identities = 315/396 (79%), Positives = 337/396 (85%), Gaps = 18/396 (4%)
 Frame = -1

Query: 1334 SLTSVFSTNSHRQCKPHS----RFTPKASLS-----------RRQLVSQAATFSLTPLV- 1203
            S TS F+ N     K HS    RF PKASL+           RRQ +SQ AT SL PL+ 
Sbjct: 3    SSTSAFTANIPFLNKSHSHSQSRFVPKASLNNVHLPHHHSLNRRQFLSQTATVSL-PLLS 61

Query: 1202 --VVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTLLETKDGG 1029
              ++   PA +EE LS+WERVYLP DPGVVLLDI+FVPDD NHGFLLGTRQT+LETKDGG
Sbjct: 62   SPLIIQQPANAEETLSEWERVYLPSDPGVVLLDIAFVPDDMNHGFLLGTRQTILETKDGG 121

Query: 1028 NTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSNQLPG 849
            NTWV RSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAG+SW+RIPLS QLPG
Sbjct: 122  NTWVSRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGDSWQRIPLSAQLPG 181

Query: 848  DMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASYYTG 669
            DMVYIKATGEKSAEMVTD+GAIY+TSN GYNW+AA+QETVSATLNRTVSSGISGASYYTG
Sbjct: 182  DMVYIKATGEKSAEMVTDQGAIYITSNGGYNWRAAVQETVSATLNRTVSSGISGASYYTG 241

Query: 668  TFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXXXXX 489
            TFNTVNRSPDGNYVAVSSRGNFYLTWEPGQP+WQPHNRAVARRIQNMGWRAD        
Sbjct: 242  TFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVR 301

Query: 488  XXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTNGGKTWTR 309
                 LSKG GI+E+FEE+ VQSRGFGILDVGYRS+ EAWAAGGSGILLRTTNGGKTWTR
Sbjct: 302  GGGLYLSKGTGISEDFEEISVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWTR 361

Query: 308  DKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            DKAAD+IAANLYSVKFIND KGFVLGNDGVLLRYLG
Sbjct: 362  DKAADSIAANLYSVKFINDSKGFVLGNDGVLLRYLG 397


>ref|XP_006847864.1| hypothetical protein AMTR_s00029p00083110 [Amborella trichopoda]
            gi|548851169|gb|ERN09445.1| hypothetical protein
            AMTR_s00029p00083110 [Amborella trichopoda]
          Length = 412

 Score =  617 bits (1591), Expect = e-174
 Identities = 316/411 (76%), Positives = 343/411 (83%), Gaps = 12/411 (2%)
 Frame = -1

Query: 1397 MATLQLTD-----YSNPSTTALRLKPSLTSVFSTNSHRQCKP------HSRFTPKASLSR 1251
            MATL L       Y  P  + + ++    SVF T S   C+P        R    ASLSR
Sbjct: 7    MATLHLQGLNYLLYKKPQASKMVIR----SVFLTRSGH-CQPPRAQLGEPRSQNLASLSR 61

Query: 1250 RQLVSQAATFSLT-PLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGF 1074
            R  +S+ A  S+  P +V F+  AK+++ LS+WERVYLPIDPGVVLLDI+FVPD+ NHGF
Sbjct: 62   RLFLSETAAISVALPSLVRFEGEAKADDGLSEWERVYLPIDPGVVLLDIAFVPDELNHGF 121

Query: 1073 LLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDA 894
            LLGTRQT+LETKDGGNTW PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTS+A
Sbjct: 122  LLGTRQTILETKDGGNTWFPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSNA 181

Query: 893  GESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN 714
            GESWERIPLSNQLPGDMVYIKATGEKSAEMVTD+GAIYVTSNRGYNWKAA+QETVSATLN
Sbjct: 182  GESWERIPLSNQLPGDMVYIKATGEKSAEMVTDQGAIYVTSNRGYNWKAAVQETVSATLN 241

Query: 713  RTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQ 534
            RTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRA ARRIQ
Sbjct: 242  RTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAAARRIQ 301

Query: 533  NMGWRADXXXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGS 354
            NMGWRAD             LSKG GITE+FEE+PVQSRGFGILDVGYRS+ EAWAAGGS
Sbjct: 302  NMGWRADGGLWLLVRGGGLYLSKGTGITEDFEEIPVQSRGFGILDVGYRSKDEAWAAGGS 361

Query: 353  GILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            GILLRT NGGKTW RDKAAD+IAANLYSVKFI+++ GFVLGNDGVLLRYLG
Sbjct: 362  GILLRTMNGGKTWIRDKAADSIAANLYSVKFIDEKTGFVLGNDGVLLRYLG 412


>ref|XP_003607248.1| Photosystem II stability/assembly factor HCF136 [Medicago truncatula]
            gi|355508303|gb|AES89445.1| Photosystem II
            stability/assembly factor HCF136 [Medicago truncatula]
          Length = 396

 Score =  612 bits (1577), Expect = e-172
 Identities = 317/403 (78%), Positives = 337/403 (83%), Gaps = 4/403 (0%)
 Frame = -1

Query: 1397 MATLQLTDYSNPSTTALRLKPSLTSVFSTNSHRQCKPHSRFTPKASL----SRRQLVSQA 1230
            MATLQ T +S+ +TT  R    L S  ST  H   +P S F  KASL    +RRQ +++ 
Sbjct: 1    MATLQFT-FSDSTTTLCRPLSQLPSSKSTIIHSP-RPRS-FVVKASLEPSRTRRQFIAET 57

Query: 1229 ATFSLTPLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTL 1050
               S    V++    AKSEE LS+WERVYLPIDPGVVLLDI+FVP D NHGFLLGTRQTL
Sbjct: 58   TAIS----VLLPSQLAKSEETLSEWERVYLPIDPGVVLLDIAFVPQDPNHGFLLGTRQTL 113

Query: 1049 LETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIP 870
            LETKDGG TW PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYT DAGESWERIP
Sbjct: 114  LETKDGGRTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTPDAGESWERIP 173

Query: 869  LSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGIS 690
            LS +LPGDMVYIKAT EKSAEMVTDEGAIYVTSNRGYNWKAA+QE+VSATLNRTVSSGIS
Sbjct: 174  LSAELPGDMVYIKATNEKSAEMVTDEGAIYVTSNRGYNWKAAVQESVSATLNRTVSSGIS 233

Query: 689  GASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADX 510
            GASYYTGTFNTVNRSPDG YVAVSSRGNFY+TWEPGQ YWQPHNRAVARRIQNMGWRAD 
Sbjct: 234  GASYYTGTFNTVNRSPDGRYVAVSSRGNFYMTWEPGQAYWQPHNRAVARRIQNMGWRADG 293

Query: 509  XXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTN 330
                        LSKG GITEEFEE+PVQSRGFGILDVGYRS  EAWAAGGSGILLRT N
Sbjct: 294  GLWLLVRGGSLFLSKGTGITEEFEEIPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTNN 353

Query: 329  GGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            GGK+W RDKAADNIAANLYSVKFI+D+KGFVLGNDGVLLRYLG
Sbjct: 354  GGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 396


>ref|XP_002310654.1| hypothetical protein POPTR_0007s07780g [Populus trichocarpa]
            gi|566180140|ref|XP_006380512.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
            gi|566180148|ref|XP_006380516.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
            gi|222853557|gb|EEE91104.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
            gi|550334364|gb|ERP58309.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
            gi|550334368|gb|ERP58313.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
          Length = 394

 Score =  611 bits (1576), Expect = e-172
 Identities = 304/392 (77%), Positives = 338/392 (86%), Gaps = 14/392 (3%)
 Frame = -1

Query: 1334 SLTS-VFSTNSHRQCKPHSRFTP--------KASLSRRQLVSQAATFSLTPLVVVFDLP- 1185
            SLTS  F+TN+    +P +  +P        +  L+RR  +SQ A+ S  PL+    L  
Sbjct: 3    SLTSPTFTTNTRCLQRPQNSHSPSQQPRLSQRPELNRRHFISQTASLSSLPLLSPLILNP 62

Query: 1184 ----AKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTLLETKDGGNTWV 1017
                A +E++LS+WERVYLPIDPGVVLLDI+FVPDD+NHGFLLGTRQT++ETKDGGNTWV
Sbjct: 63   QQANAAAEDSLSEWERVYLPIDPGVVLLDIAFVPDDTNHGFLLGTRQTIMETKDGGNTWV 122

Query: 1016 PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSNQLPGDMVY 837
             RSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYT+D+GE+WERIPLS QLPGDMVY
Sbjct: 123  QRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTADSGETWERIPLSAQLPGDMVY 182

Query: 836  IKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASYYTGTFNT 657
            IKATGEKSAEMVTDEGAIY+TSNRGYNW+AA+QE+VSATLNRTVSSGISGASYYTGTFNT
Sbjct: 183  IKATGEKSAEMVTDEGAIYITSNRGYNWRAAVQESVSATLNRTVSSGISGASYYTGTFNT 242

Query: 656  VNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXXXXXXXXX 477
            VNRSP+GNYVAVSSRGNFYLTWEPGQ +WQPHNRA+ARRIQNMGWRAD            
Sbjct: 243  VNRSPNGNYVAVSSRGNFYLTWEPGQAFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGL 302

Query: 476  XLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTNGGKTWTRDKAA 297
             LSKG GI+EEFEE+PVQSRGFGILDVGYRS+ EAWAAGGSG+LLRTTNGGKTWTRDKAA
Sbjct: 303  YLSKGTGISEEFEEIPVQSRGFGILDVGYRSKEEAWAAGGSGVLLRTTNGGKTWTRDKAA 362

Query: 296  DNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            DNIAANLYSVKFI+D+KGFVLGNDGVLLRYLG
Sbjct: 363  DNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 394


>gb|AHM26647.1| photosystem II stability/assembly factor protein [Pyrus x
            bretschneideri]
          Length = 408

 Score =  610 bits (1574), Expect = e-172
 Identities = 313/411 (76%), Positives = 345/411 (83%), Gaps = 9/411 (2%)
 Frame = -1

Query: 1406 LQQMATLQLT-DYSNPSTTALRLKPSLTSVFSTNSHRQCKPHSRFTPKAS----LSRRQL 1242
            ++   TLQLT D+S P+   + LKPSL    +    R      R +  +S    +SRR  
Sbjct: 1    MKMAPTLQLTTDFSKPT---IHLKPSLEFATTPRHFRTSLSIPRASSSSSDSSLVSRRHF 57

Query: 1241 VSQAATFSLTPLVVVFD---LPAKSEE-ALSDWERVYLPIDPGVVLLDISFVPDDSNHGF 1074
            VS+ A  SL+   +      LPAK+E+ ALS+WE+V LPIDPGVVLLDI+FVP+D  HGF
Sbjct: 58   VSETAALSLSLTTLPLFGSVLPAKAEDPALSEWEKVSLPIDPGVVLLDIAFVPEDPKHGF 117

Query: 1073 LLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDA 894
            LLGTRQTLLETKDGG TWVPRSIPSAEDEDFNYRFN+ISFKGKEGWIVGKPAILL+TSD+
Sbjct: 118  LLGTRQTLLETKDGGETWVPRSIPSAEDEDFNYRFNAISFKGKEGWIVGKPAILLHTSDS 177

Query: 893  GESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN 714
            G+SWERIPLS+QLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNW+AA+QETVSATLN
Sbjct: 178  GDSWERIPLSSQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLN 237

Query: 713  RTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQ 534
            RTVSSGISGASYYTGTFN+VNRSPDG YVAVSSRGNFYLTWEPGQPYWQPHNR VARRIQ
Sbjct: 238  RTVSSGISGASYYTGTFNSVNRSPDGKYVAVSSRGNFYLTWEPGQPYWQPHNRTVARRIQ 297

Query: 533  NMGWRADXXXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGS 354
            NMGWRAD             LSKG G+TE+FEEVPVQSRGFGILDVGYRS+ EAWAAGGS
Sbjct: 298  NMGWRADGGLWLLVRGGGLYLSKGTGLTEDFEEVPVQSRGFGILDVGYRSKDEAWAAGGS 357

Query: 353  GILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            GILL+TTNGGKTWTRDKAADNIAANLYSVKFI+D+KGFVLGNDGVLLRYLG
Sbjct: 358  GILLQTTNGGKTWTRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 408


>ref|XP_007131634.1| hypothetical protein PHAVU_011G029800g [Phaseolus vulgaris]
            gi|561004634|gb|ESW03628.1| hypothetical protein
            PHAVU_011G029800g [Phaseolus vulgaris]
          Length = 395

 Score =  608 bits (1569), Expect = e-171
 Identities = 306/399 (76%), Positives = 335/399 (83%)
 Frame = -1

Query: 1397 MATLQLTDYSNPSTTALRLKPSLTSVFSTNSHRQCKPHSRFTPKASLSRRQLVSQAATFS 1218
            MATLQ T   + S     L  S T   + +   +    S  +   S SRR+ +++    S
Sbjct: 1    MATLQFTFTDSTSLFRPSLPSSRTFPRNRSLVVKASSSSSSSDDISRSRRRFLAETTAIS 60

Query: 1217 LTPLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTLLETK 1038
            ++    +  L A++E+ LS+WERVYLPIDPGVVLLDISFVPDD NHGFLLGTRQT+LETK
Sbjct: 61   VS----LPHLAARAEDTLSEWERVYLPIDPGVVLLDISFVPDDPNHGFLLGTRQTILETK 116

Query: 1037 DGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSNQ 858
            DGGNTW PRSIPSAEDEDFNYRFNSISFKG+EGWIVGKPAILLYT+DAG+SWERIPLS +
Sbjct: 117  DGGNTWAPRSIPSAEDEDFNYRFNSISFKGREGWIVGKPAILLYTADAGDSWERIPLSAE 176

Query: 857  LPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASY 678
            LPGDMVYIKATGEKSAEMVTDEGAIYVT+NRGYNW+AA+QETVSATLNRTVSSGISGASY
Sbjct: 177  LPGDMVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASY 236

Query: 677  YTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXX 498
            YTGTFNTVNRSP+G YVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRAD     
Sbjct: 237  YTGTFNTVNRSPEGKYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWL 296

Query: 497  XXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTNGGKT 318
                    LSKG G+TEEFEEVPVQSRGFGILDVGYRS  EAWAAGGSGILLRTTNGGK+
Sbjct: 297  LVRGGGLYLSKGTGLTEEFEEVPVQSRGFGILDVGYRSTEEAWAAGGSGILLRTTNGGKS 356

Query: 317  WTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            W RDKAADNIAANLYSVKFI+D+KGFVLGNDGVLLRYLG
Sbjct: 357  WIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 395


>ref|XP_007222695.1| hypothetical protein PRUPE_ppa006376mg [Prunus persica]
            gi|462419631|gb|EMJ23894.1| hypothetical protein
            PRUPE_ppa006376mg [Prunus persica]
          Length = 414

 Score =  608 bits (1569), Expect = e-171
 Identities = 317/418 (75%), Positives = 344/418 (82%), Gaps = 16/418 (3%)
 Frame = -1

Query: 1406 LQQMATLQLT-DYSNPSTTALRLKPSL----------TSVFSTNSHRQCKPHSRFTPKAS 1260
            ++   TLQLT D S P    + +KPSL          TS+     +   +  S  +  + 
Sbjct: 1    MKMATTLQLTTDLSKP---IIVVKPSLEFASTPRHCRTSLSLPRFNNIARASSSSSDSSL 57

Query: 1259 LSRRQLVSQAATFSLT----PLVVVFDLPAKSEE-ALSDWERVYLPIDPGVVLLDISFVP 1095
            +SRR  VS+ A  SLT    PL      PAKSEE ALS+WE+V LPIDPGVVLLDI+FVP
Sbjct: 58   VSRRHFVSETAALSLTLTTLPLFGSIQ-PAKSEESALSEWEKVSLPIDPGVVLLDIAFVP 116

Query: 1094 DDSNHGFLLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAI 915
            +D  HGFLLGTRQT+LETKDGG+TWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAI
Sbjct: 117  EDPKHGFLLGTRQTILETKDGGDTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAI 176

Query: 914  LLYTSDAGESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQE 735
            LL+TSD+G SWERIPLS+QLPGDMVYIKATGEKSAEMVTDEGAIY+TSNRGYNWKAA+QE
Sbjct: 177  LLHTSDSGNSWERIPLSSQLPGDMVYIKATGEKSAEMVTDEGAIYITSNRGYNWKAAVQE 236

Query: 734  TVSATLNRTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNR 555
            TVSATLNRTVSSGISGASYYTGTFN+VNRSPDGNYVAVSSRGNFYLTWEPGQP+WQPHNR
Sbjct: 237  TVSATLNRTVSSGISGASYYTGTFNSVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNR 296

Query: 554  AVARRIQNMGWRADXXXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAE 375
             VARRIQNMGWRAD             LSKG G+TEEFEEVPVQSRGFGILDVGYRS+ E
Sbjct: 297  TVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGLTEEFEEVPVQSRGFGILDVGYRSKDE 356

Query: 374  AWAAGGSGILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            AWAAGGSGILLRTTNGGKTWTRDKAADNIAANLYSVKFI+D  GFVLGNDGVLLRYLG
Sbjct: 357  AWAAGGSGILLRTTNGGKTWTRDKAADNIAANLYSVKFIDDSTGFVLGNDGVLLRYLG 414


>ref|XP_004505712.1| PREDICTED: LOW QUALITY PROTEIN: photosystem II stability/assembly
            factor HCF136, chloroplastic-like [Cicer arietinum]
          Length = 391

 Score =  601 bits (1550), Expect = e-169
 Identities = 314/403 (77%), Positives = 333/403 (82%), Gaps = 4/403 (0%)
 Frame = -1

Query: 1397 MATLQLTDYSNPSTTALRLKPSLTSVFSTNSHRQCKPHSRFTPKASL----SRRQLVSQA 1230
            MATLQ T     S+T  +  P L S    +S  +      F  KASL    +RRQ +++ 
Sbjct: 1    MATLQFT--FTDSSTFCKPLPQLPSKSVLHSRTRS-----FVVKASLELSRTRRQFIAET 53

Query: 1229 ATFSLTPLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTL 1050
               S    V+V    AKSEE LSD  RVYLPIDPGVVLLDI+FVPDD NHGFLLGTRQTL
Sbjct: 54   TAIS----VLVPSQLAKSEETLSDX-RVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTL 108

Query: 1049 LETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIP 870
            LETKDGGNTW PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAG+SWERIP
Sbjct: 109  LETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGDSWERIP 168

Query: 869  LSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGIS 690
            LS +LPGDMVYIKATGEK AEMVTDEGAIYVTSNRGYNW+AA+QE+VSATLNRTVSSGIS
Sbjct: 169  LSAELPGDMVYIKATGEKGAEMVTDEGAIYVTSNRGYNWRAAVQESVSATLNRTVSSGIS 228

Query: 689  GASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADX 510
            GASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQ YWQPHNRAVARRIQNMGWRAD 
Sbjct: 229  GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQPHNRAVARRIQNMGWRADG 288

Query: 509  XXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTN 330
                        LSKG GITEEFEEVPVQSRGFGILDVGYRS  EAWAAGGSG+LLRT N
Sbjct: 289  GLWLLVRGGGLYLSKGTGITEEFEEVPVQSRGFGILDVGYRSTEEAWAAGGSGVLLRTNN 348

Query: 329  GGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            GGK+W RDKAADNIAANLYSVKFI+D+KGFVLGNDGVLLRYLG
Sbjct: 349  GGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 391


>ref|XP_006394580.1| hypothetical protein EUTSA_v10004338mg [Eutrema salsugineum]
            gi|557091219|gb|ESQ31866.1| hypothetical protein
            EUTSA_v10004338mg [Eutrema salsugineum]
          Length = 404

 Score =  599 bits (1545), Expect = e-169
 Identities = 307/411 (74%), Positives = 343/411 (83%), Gaps = 12/411 (2%)
 Frame = -1

Query: 1397 MATLQLTDYSNPSTTALRLKPSLTSVFSTN--SHRQC--------KPHSRFTPKASLSRR 1248
            MA+LQL D        L  KPS++  F  N  SHR           P S  +   SL+RR
Sbjct: 1    MASLQLCD------GYLLFKPSVSPRFLPNRISHRLIPKASASSPSPSSSSSSSLSLNRR 54

Query: 1247 QLVSQAATFSLTPLVVVFD--LPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGF 1074
            QL+ Q+A  SL+ L  +F     AK++E LS+WERV+LPIDPGVVLLDI+FVPDD + GF
Sbjct: 55   QLLYQSAAVSLS-LSSIFGPVKEAKADEQLSEWERVFLPIDPGVVLLDIAFVPDDPSRGF 113

Query: 1073 LLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDA 894
            LLGTRQTLLETKDGGNTW PRSIPSAE+EDFNYRFNSISFKGKEGWI+GKPAILLYT+DA
Sbjct: 114  LLGTRQTLLETKDGGNTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTADA 173

Query: 893  GESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN 714
            GE+W+RIPLS+QLPGDMV+I+ATG+KSAEMVTDEGAIYVTSN+GYNWKAAIQETVSATLN
Sbjct: 174  GENWDRIPLSSQLPGDMVFIEATGDKSAEMVTDEGAIYVTSNKGYNWKAAIQETVSATLN 233

Query: 713  RTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQ 534
            RTVSSGISGASYYTGTF+ VNRSPDG YVAVSSRGNF+LTWEPGQPYWQPHNRAVARRIQ
Sbjct: 234  RTVSSGISGASYYTGTFSAVNRSPDGKYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQ 293

Query: 533  NMGWRADXXXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGS 354
            NMGWRAD             LSKG GI+EEF+EVPVQSRGFGILDVGYRS+ EAWAAGGS
Sbjct: 294  NMGWRADGGLWLLVRGGGLYLSKGTGISEEFDEVPVQSRGFGILDVGYRSEEEAWAAGGS 353

Query: 353  GILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            GILLRT NGGK+W RDKAADNIAANLY+VKF++D+KGFVLGNDGVLLRY+G
Sbjct: 354  GILLRTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 404


>ref|XP_004966550.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Setaria italica]
          Length = 395

 Score =  597 bits (1540), Expect = e-168
 Identities = 296/365 (81%), Positives = 318/365 (87%), Gaps = 3/365 (0%)
 Frame = -1

Query: 1286 HSRFTPKASLSRRQLVSQAATFSLTPLVVVFDLP---AKSEEALSDWERVYLPIDPGVVL 1116
            HS   P A   RR +   AA  ++ PLV+    P   A    ALS+WERV+LPIDPGVVL
Sbjct: 31   HSNSDPTAVDRRRFIAHTAAAAAVAPLVLPRWTPTARADDAPALSEWERVFLPIDPGVVL 90

Query: 1115 LDISFVPDDSNHGFLLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGW 936
            LDI+FVPDD +HGFLLGTRQT+LETKDGGNTW PRSIPSAEDEDFNYRFNS+SFKGKEGW
Sbjct: 91   LDIAFVPDDPSHGFLLGTRQTILETKDGGNTWFPRSIPSAEDEDFNYRFNSVSFKGKEGW 150

Query: 935  IVGKPAILLYTSDAGESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYN 756
            I+GKPAILL+TS+AGESWERIPLS QLPG+MVYIKATGE+SAEMVTDEGAIYVTSNRGYN
Sbjct: 151  IIGKPAILLHTSNAGESWERIPLSAQLPGNMVYIKATGEQSAEMVTDEGAIYVTSNRGYN 210

Query: 755  WKAAIQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQP 576
            WKAA+QETVSATLNRTVSSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQP
Sbjct: 211  WKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQP 270

Query: 575  YWQPHNRAVARRIQNMGWRADXXXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDV 396
            +WQPHNRAVARRIQNMGWRAD             LSKG GITE+FEEV VQSRGFGILDV
Sbjct: 271  FWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGTGITEDFEEVQVQSRGFGILDV 330

Query: 395  GYRSQAEAWAAGGSGILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVL 216
            GYRSQ EAWAAGGSG+LL+TTNGGK W RDKAADNIAANLYSVKF++DRKGFVLGNDGVL
Sbjct: 331  GYRSQDEAWAAGGSGVLLKTTNGGKNWVRDKAADNIAANLYSVKFLDDRKGFVLGNDGVL 390

Query: 215  LRYLG 201
            LRYLG
Sbjct: 391  LRYLG 395


>ref|XP_002439075.1| hypothetical protein SORBIDRAFT_10g031120 [Sorghum bicolor]
            gi|241917298|gb|EER90442.1| hypothetical protein
            SORBIDRAFT_10g031120 [Sorghum bicolor]
          Length = 397

 Score =  597 bits (1540), Expect = e-168
 Identities = 297/368 (80%), Positives = 324/368 (88%), Gaps = 6/368 (1%)
 Frame = -1

Query: 1286 HSRFTPK--ASLSRRQLVSQ-AATFSLTPLVVVFDLPAKSEE---ALSDWERVYLPIDPG 1125
            HS  TP   AS+ RR+ ++  AA  +++PLV+    PA   +   ALS+WERV+LPIDPG
Sbjct: 30   HSESTPPGAASVDRRRFIAHTAAAAAVSPLVLPRWTPAARADGAPALSEWERVFLPIDPG 89

Query: 1124 VVLLDISFVPDDSNHGFLLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGK 945
            VVLLDI+FVPDD +HGFLLGTRQT+LETKDGGNTW PRSIPSAEDEDFNYRFNS+SFKGK
Sbjct: 90   VVLLDIAFVPDDPSHGFLLGTRQTILETKDGGNTWFPRSIPSAEDEDFNYRFNSVSFKGK 149

Query: 944  EGWIVGKPAILLYTSDAGESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNR 765
            EGWI+GKPAILL+TSDAGESWERIPLS QLPG+MVYIKATGE+SAEMVTDEGAIYVTSNR
Sbjct: 150  EGWIIGKPAILLHTSDAGESWERIPLSAQLPGNMVYIKATGEQSAEMVTDEGAIYVTSNR 209

Query: 764  GYNWKAAIQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEP 585
            GYNWKAA+QETVSATLNRTVSSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEP
Sbjct: 210  GYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEP 269

Query: 584  GQPYWQPHNRAVARRIQNMGWRADXXXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGI 405
            GQP+WQPHNRAVARRIQNMGWRAD             LSKG GI+E+FEEV VQSRGFGI
Sbjct: 270  GQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEDFEEVQVQSRGFGI 329

Query: 404  LDVGYRSQAEAWAAGGSGILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGND 225
            LDVGYRSQ EAWAAGGSG+LL+TTNGGK W RDKAADNIAANLYSVKF++D KGFVLGND
Sbjct: 330  LDVGYRSQEEAWAAGGSGVLLKTTNGGKNWVRDKAADNIAANLYSVKFLDDSKGFVLGND 389

Query: 224  GVLLRYLG 201
            GVLLRYLG
Sbjct: 390  GVLLRYLG 397


>ref|NP_197703.1| photosystem II stability/assembly factor HCF136 [Arabidopsis
            thaliana] gi|6016183|sp|O82660.1|P2SAF_ARATH RecName:
            Full=Photosystem II stability/assembly factor HCF136,
            chloroplastic; Flags: Precursor
            gi|3559807|emb|CAA75723.1| HCF136 protein [Arabidopsis
            thaliana] gi|9759370|dbj|BAB09829.1| photosystem II
            stability/assembly factor HCF136 [Arabidopsis thaliana]
            gi|15010780|gb|AAK74049.1| AT5g23120/MYJ24_11
            [Arabidopsis thaliana] gi|28416529|gb|AAO42795.1|
            At5g23120/MYJ24_11 [Arabidopsis thaliana]
            gi|332005741|gb|AED93124.1| photosystem II
            stability/assembly factor HCF136 [Arabidopsis thaliana]
          Length = 403

 Score =  595 bits (1534), Expect = e-167
 Identities = 305/411 (74%), Positives = 341/411 (82%), Gaps = 12/411 (2%)
 Frame = -1

Query: 1397 MATLQLTDYSNPSTTALRLKPSLTSVFSTN--SHRQCKPHSRFTPKA----------SLS 1254
            MA+LQL D        L  KPS++  F +   SHR     S   P +          S S
Sbjct: 1    MASLQLCD------GYLLFKPSVSPRFLSQRISHRLIPKASSSPPPSPSPSSSSSSLSFS 54

Query: 1253 RRQLVSQAATFSLTPLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGF 1074
            RR+L+ Q+A  SL+   +V   PA+++E LS+WERV+LPIDPGVVLLDI+FVPD+ + GF
Sbjct: 55   RRELLYQSAAVSLSLSSIVG--PARADEQLSEWERVFLPIDPGVVLLDIAFVPDEPSRGF 112

Query: 1073 LLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDA 894
            LLGTRQTLLETKDGG+TW PRSIPSAE+EDFNYRFNSISFKGKEGWI+GKPAILLYT+DA
Sbjct: 113  LLGTRQTLLETKDGGSTWNPRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTADA 172

Query: 893  GESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN 714
            GE+W+RIPLS+QLPGDMV+IKAT +KSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN
Sbjct: 173  GENWDRIPLSSQLPGDMVFIKATEDKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN 232

Query: 713  RTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQ 534
            RTVSSGISGASYYTGTF+ VNRSPDG YVAVSSRGNF+LTWEPGQPYWQPHNRAVARRIQ
Sbjct: 233  RTVSSGISGASYYTGTFSAVNRSPDGRYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQ 292

Query: 533  NMGWRADXXXXXXXXXXXXXLSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGS 354
            NMGWRAD             LSKG GITEEFEEVPVQSRGFGILDVGYRS+ EAWAAGGS
Sbjct: 293  NMGWRADGGLWLLVRGGGLYLSKGTGITEEFEEVPVQSRGFGILDVGYRSEEEAWAAGGS 352

Query: 353  GILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 201
            GILLRT NGGK+W RDKAADNIAANLY+VKF++D+KGFVLGNDGVLLRY+G
Sbjct: 353  GILLRTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 403


>ref|XP_006354977.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Solanum tuberosum]
          Length = 402

 Score =  593 bits (1530), Expect = e-167
 Identities = 300/382 (78%), Positives = 333/382 (87%), Gaps = 11/382 (2%)
 Frame = -1

Query: 1313 TNSHRQCKPHSRFTPK------ASLSRRQLVSQ-AATFSLTPLVVVFDLP---AKSEEA- 1167
            T + R   PH+ F P+      A+++RRQL+++ AA  +L PL+ V   P   AK+EE  
Sbjct: 22   TTTPRPLLPHN-FPPRLPLCRAANINRRQLIAETAAAIALPPLLGVSLSPIPVAKAEETP 80

Query: 1166 LSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTLLETKDGGNTWVPRSIPSAEDE 987
            LS+WERV+LPI+PGVVLLDI+FVPDD NHGF+LGTRQT+LETKDGG TWVPRSI SAE+E
Sbjct: 81   LSEWERVFLPINPGVVLLDIAFVPDDPNHGFVLGTRQTILETKDGGTTWVPRSIASAEEE 140

Query: 986  DFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSNQLPGDMVYIKATGEKSAE 807
            DFNYRFNSISFKGKEGWI+GKPAILL+TSDAGE+WERIPLS+QLPGDMVYIKATGE+SAE
Sbjct: 141  DFNYRFNSISFKGKEGWIIGKPAILLHTSDAGENWERIPLSSQLPGDMVYIKATGEQSAE 200

Query: 806  MVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGNYV 627
            MVTDEGAIY+TSN+GYNWKAAIQETVSATLNRTVSSGISGASYYTGTF+TVNRSPDG YV
Sbjct: 201  MVTDEGAIYITSNKGYNWKAAIQETVSATLNRTVSSGISGASYYTGTFSTVNRSPDGRYV 260

Query: 626  AVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXXXXXXXXXXLSKGKGITE 447
            AVSSRGNFYLTWEPGQ YWQPHNRAVARRIQ+MGWRAD             LSKG G+TE
Sbjct: 261  AVSSRGNFYLTWEPGQAYWQPHNRAVARRIQSMGWRADGGLWLLVRGGGLYLSKGTGLTE 320

Query: 446  EFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTNGGKTWTRDKAADNIAANLYSV 267
            +FEEV VQSRGFGILDVGYRSQ EAWAAGGSGILL+TTNGGKTW RDKAADNIAANLYSV
Sbjct: 321  DFEEVSVQSRGFGILDVGYRSQDEAWAAGGSGILLKTTNGGKTWIRDKAADNIAANLYSV 380

Query: 266  KFINDRKGFVLGNDGVLLRYLG 201
            KFIND +GFVLGNDGVLL+YLG
Sbjct: 381  KFINDNQGFVLGNDGVLLKYLG 402