BLASTX nr result

ID: Paeonia25_contig00012708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00012708
         (464 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinif...    58   1e-06
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    57   3e-06
ref|XP_006574655.1| PREDICTED: F-box protein SKIP23-like isoform...    57   3e-06
ref|XP_007201791.1| hypothetical protein PRUPE_ppa006538mg [Prun...    55   8e-06

>ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinifera]
          Length = 375

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
 Frame = -2

Query: 448 WVEIESLGDRMLFVDQRDVCSFSISARDFTRCQANCIYEVN--FLTTTYEDDFASYTRVY 275
           WVE+E+LGDR+LF+ ++   +FS  A +F  C+ NCIY  N  F     EDD  +   ++
Sbjct: 283 WVEVENLGDRILFLGEKS--TFSAVASEFCGCEGNCIYYTNSFFFPNDQEDDAYTGIGIF 340

Query: 274 NLDDGSIKEF-----HGNVLWS 224
           NL++G++        +  V+WS
Sbjct: 341 NLENGNLGPLSSFPNYSKVIWS 362


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
 Frame = -2

Query: 463 EEEGKWVEIESLGDRMLFVDQRDVCSFSISARDFTRCQAN--CIYEVNFLTTTYEDDF-- 296
           + E KWVEIESLGDR+LF+   D  SFS  A DF  C+ N  C   ++F +   EDD   
Sbjct: 289 QREQKWVEIESLGDRLLFLG--DDSSFSARASDFYGCKGNSICFTNISFFSDAEEDDASR 346

Query: 295 ASYTRVYNLDDGSI 254
           +    V++LD GSI
Sbjct: 347 SGTIGVFDLDSGSI 360


>ref|XP_006574655.1| PREDICTED: F-box protein SKIP23-like isoform X1 [Glycine max]
           gi|571438728|ref|XP_006574656.1| PREDICTED: F-box
           protein SKIP23-like isoform X2 [Glycine max]
          Length = 379

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = -2

Query: 463 EEEGKWVEIESLGDRMLFVDQRDVCSFSISARDFTRCQANCIYEVNFLTTTYEDDFASYT 284
           EE GKWV++++LGDR   +     CSFS+SA++ T  Q NCIY        + D F    
Sbjct: 297 EEWGKWVDVKNLGDRAFVLGNS--CSFSVSAKELTGYQENCIY--------FTDIFD--V 344

Query: 283 RVYNLDDGSI 254
           RVYNLDD SI
Sbjct: 345 RVYNLDDRSI 354


>ref|XP_007201791.1| hypothetical protein PRUPE_ppa006538mg [Prunus persica]
           gi|462397191|gb|EMJ02990.1| hypothetical protein
           PRUPE_ppa006538mg [Prunus persica]
          Length = 406

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
 Frame = -2

Query: 463 EEEGK-WVEIESLGDRMLFVDQRDVCSFSISARDFTRCQANCIYEV-NFLTTTYEDDFAS 290
           + EGK  VE++SLGDR+LF+   D C+FS SA + + C+ NCI+   NF  T+ ED+   
Sbjct: 300 DREGKRLVELKSLGDRVLFLG--DDCTFSASASELSGCKGNCIFFTDNFFYTSGEDEGVF 357

Query: 289 YTR---VYNLDDGSI 254
             R   V++LDDGSI
Sbjct: 358 KGRDIGVFDLDDGSI 372


Top