BLASTX nr result
ID: Paeonia25_contig00012411
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00012411
(985 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prun... 241 4e-61
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr... 240 7e-61
ref|XP_007014514.1| DNA-directed RNA polymerase II, putative iso... 238 4e-60
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I... 237 5e-60
ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A... 237 6e-60
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, I... 235 2e-59
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I... 234 3e-59
ref|XP_004976019.1| PREDICTED: DNA-directed RNA polymerases I, I... 234 5e-59
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun... 234 5e-59
ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, I... 233 7e-59
ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II a... 232 2e-58
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a... 231 3e-58
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun... 231 4e-58
ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, I... 231 4e-58
ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil... 230 6e-58
ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, I... 229 1e-57
ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III ... 229 1e-57
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [... 228 2e-57
ref|XP_004967757.1| PREDICTED: DNA-directed RNA polymerases I, I... 228 3e-57
ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis ... 228 4e-57
>ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prunus persica]
gi|462416214|gb|EMJ20951.1| hypothetical protein
PRUPE_ppa024345mg [Prunus persica]
Length = 206
Score = 241 bits (614), Expect = 4e-61
Identities = 117/200 (58%), Positives = 156/200 (78%)
Frame = +3
Query: 138 ENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCKEKDPLD 317
E T+ +R+RRT+ +MLRDR Y V D EINM EQF AK+GE +KR+D I+K K D D
Sbjct: 7 EITRLYRVRRTVMQMLRDRKYLVGDFEINMTREQFKAKYGENMKREDLTINKTKRNDSTD 66
Query: 318 QIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKCFNMDVF 497
Q+YVFFPEEPKVGVK++K+Y+ RM SD V AI+V ++ ++P A+ I +++ F+M+VF
Sbjct: 67 QLYVFFPEEPKVGVKTIKTYTNRMKSDNVARAILVTQQNMTPMARTCISEISSKFHMEVF 126
Query: 498 EEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYGLKRGQV 677
+E +L+VNVT+HVLVP+H+LLT ++K LL+R+ V ET+LPRI + DPVAKYYGLKRGQV
Sbjct: 127 QEPELMVNVTEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQLTDPVAKYYGLKRGQV 186
Query: 678 VKITRKSQTADTYETYRYVV 737
+KI R S+TA Y TYRYVV
Sbjct: 187 MKIIRPSETAGRYITYRYVV 206
>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|567918420|ref|XP_006451216.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Citrus sinensis] gi|568843558|ref|XP_006475671.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like isoform X2 [Citrus sinensis]
gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X3
[Citrus sinensis] gi|557554441|gb|ESR64455.1|
hypothetical protein CICLE_v10009504mg [Citrus
clementina] gi|557554442|gb|ESR64456.1| hypothetical
protein CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 240 bits (612), Expect = 7e-61
Identities = 118/200 (59%), Positives = 157/200 (78%)
Frame = +3
Query: 138 ENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCKEKDPLD 317
E + FRIRRT+ +MLRDRGY V D EINM EQF+AK GE +KR+D VI+K D D
Sbjct: 7 EIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKALRNDSSD 66
Query: 318 QIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKCFNMDVF 497
QIYVFFP+E KVGVK++K+Y+ RM S+ V+ AI+VV++ L+P A+ I +++ F+++VF
Sbjct: 67 QIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAKFHLEVF 126
Query: 498 EEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYGLKRGQV 677
+EA+LLVN+ +HVLVP+H++LT ++K LLKR+ V ET+LPRI V DP+A+YYGLKRGQV
Sbjct: 127 QEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYGLKRGQV 186
Query: 678 VKITRKSQTADTYETYRYVV 737
VKI R S+TA Y TYRYVV
Sbjct: 187 VKIIRPSETAGRYVTYRYVV 206
>ref|XP_007014514.1| DNA-directed RNA polymerase II, putative isoform 1 [Theobroma
cacao] gi|590582044|ref|XP_007014515.1| DNA-directed RNA
polymerase II, putative isoform 1 [Theobroma cacao]
gi|508784877|gb|EOY32133.1| DNA-directed RNA polymerase
II, putative isoform 1 [Theobroma cacao]
gi|508784878|gb|EOY32134.1| DNA-directed RNA polymerase
II, putative isoform 1 [Theobroma cacao]
Length = 208
Score = 238 bits (606), Expect = 4e-60
Identities = 119/208 (57%), Positives = 158/208 (75%), Gaps = 2/208 (0%)
Frame = +3
Query: 120 MSEFNGENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGI--KRDDFVIHK 293
MS + + TK F+ RRT+ +MLRDRGYSV D +I +QF+ K G+ I KRDD +IH
Sbjct: 1 MSVSDEQITKLFKARRTVLQMLRDRGYSVDDSDIKTTRQQFIEKFGDNIHLKRDDLLIHC 60
Query: 294 CKEKDPLDQIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVN 473
K P+DQIYVFFP E KVGV V++ + RM +D V+NAI+VV+K L+ AK +I ++N
Sbjct: 61 NKGDAPIDQIYVFFPAELKVGVPMVRNCAKRMKADNVFNAILVVQKALTAPAKAAINEIN 120
Query: 474 KCFNMDVFEEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKY 653
F+MDVFEEA+LL N+T+H+ VPKH +LT +K +LL++++V ET+LPRILV DPVA+Y
Sbjct: 121 SYFHMDVFEEAELLTNITEHMFVPKHTVLTDQEKKKLLEKYRVKETQLPRILVSDPVARY 180
Query: 654 YGLKRGQVVKITRKSQTADTYETYRYVV 737
YG+K GQVVKITR+S TADTY+TYRY V
Sbjct: 181 YGMKHGQVVKITRESVTADTYDTYRYAV 208
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1 isoform 1 [Vitis vinifera]
gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1 isoform 2
[Vitis vinifera]
Length = 206
Score = 237 bits (605), Expect = 5e-60
Identities = 117/206 (56%), Positives = 160/206 (77%)
Frame = +3
Query: 120 MSEFNGENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCK 299
MS E ++ FRIR+T+ +ML+DRGY V D EINM QFV+K GE +KR+D VI+K K
Sbjct: 1 MSASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAK 60
Query: 300 EKDPLDQIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKC 479
D DQIYVFFPEE KVGVK++K+Y+ RM S+ V+ AI+VV++ L+P A+ I +++
Sbjct: 61 RTDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120
Query: 480 FNMDVFEEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYG 659
F+++VF+EA+LLVN+ +HVLVP+H++LT ++K LL+R+ V ET+LPRI V DP+A+Y+G
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFG 180
Query: 660 LKRGQVVKITRKSQTADTYETYRYVV 737
LKRGQVVKI R S+TA Y TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206
>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
gi|548863022|gb|ERN20377.1| hypothetical protein
AMTR_s00068p00034280 [Amborella trichopoda]
Length = 206
Score = 237 bits (604), Expect = 6e-60
Identities = 112/206 (54%), Positives = 160/206 (77%)
Frame = +3
Query: 120 MSEFNGENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCK 299
MS + + +K FRIRRTL +MLRDRGY V D EINM QF+ K G+ +K+DD VI+K
Sbjct: 1 MSGMDDQTSKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKTM 60
Query: 300 EKDPLDQIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKC 479
+P +QIYVFFPEE KVGVK+VK+Y+ RM S+ V+ AI+V+++ L+P A+ + +++
Sbjct: 61 RNNPSEQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCVQEISAK 120
Query: 480 FNMDVFEEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYG 659
F++++F+E++LLVN+ +HVLVP+H++LT ++K LL+R+ + ET+LPRI + DP+A+YYG
Sbjct: 121 FHLEIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYG 180
Query: 660 LKRGQVVKITRKSQTADTYETYRYVV 737
LKRGQVVKI R S+TA Y TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Solanum lycopersicum]
gi|460388693|ref|XP_004240000.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
isoform 2 [Solanum lycopersicum]
Length = 206
Score = 235 bits (599), Expect = 2e-59
Identities = 112/200 (56%), Positives = 155/200 (77%)
Frame = +3
Query: 138 ENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCKEKDPLD 317
E +K FR+R+TL EML DRGY V D EINM QF+ K+GE +KR+D VI K K + D
Sbjct: 7 ELSKLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAKRNNSSD 66
Query: 318 QIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKCFNMDVF 497
QIYVFFPEEPKVGVK++K+Y+ RM + V+ AI++V++ L+P A+ I +++ F+++VF
Sbjct: 67 QIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTKFHLEVF 126
Query: 498 EEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYGLKRGQV 677
+EA++LVN+ HVL+P+H+LL+ ++K LL+R+ V ET+LPRI + DP+A+YYGLKRGQV
Sbjct: 127 QEAEMLVNIKNHVLIPEHQLLSPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQV 186
Query: 678 VKITRKSQTADTYETYRYVV 737
VKI R S+TA Y TYRYVV
Sbjct: 187 VKIIRPSETAGRYITYRYVV 206
>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
Length = 207
Score = 234 bits (598), Expect = 3e-59
Identities = 117/201 (58%), Positives = 156/201 (77%), Gaps = 1/201 (0%)
Frame = +3
Query: 138 ENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCKEKDPLD 317
E T+ FRIR+T+++MLRDRGY V D EI+M EQF K+GE +KR+D VI+K K D D
Sbjct: 7 EITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSD 66
Query: 318 QIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIID-VNKCFNMDV 494
QIYVFFPEE KVG+K +K+Y+ RM S+ V+ AI+VV++ L+P A+ + + +K F+++V
Sbjct: 67 QIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILVVQQNLTPFARACMSEATSKSFHLEV 126
Query: 495 FEEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYGLKRGQ 674
F+EA+LLVN+ HVLVP+H+LL ++K LL+R+ V ET+LPRI V DPVA+YYGLKRGQ
Sbjct: 127 FQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQ 186
Query: 675 VVKITRKSQTADTYETYRYVV 737
VVKI R S+TA Y TYRYVV
Sbjct: 187 VVKIIRPSETAGRYVTYRYVV 207
>ref|XP_004976019.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Setaria italica]
Length = 206
Score = 234 bits (596), Expect = 5e-59
Identities = 108/206 (52%), Positives = 160/206 (77%)
Frame = +3
Query: 120 MSEFNGENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCK 299
M+ GE + +RIRRT+ +MLRDRGY + + +I +K E F+ ++G+ ++RDD VI++CK
Sbjct: 1 MASSEGETNRLWRIRRTVMQMLRDRGYLITEADIGLKREAFIDRYGDPVRRDDLVINRCK 60
Query: 300 EKDPLDQIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKC 479
+ DP DQIYVFFP EPK GVK++++Y +M + V+ AI+VV++ LS A+ ++ +V++
Sbjct: 61 KDDPADQIYVFFPNEPKPGVKTIRNYVEKMKQENVFAAILVVQQALSAFARSAVQEVSQK 120
Query: 480 FNMDVFEEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYG 659
++++VF+EA+LLVN+ +HVLVP+HELLT + K LL+R+ V ET+LPRI + DP+A+YYG
Sbjct: 121 YHLEVFQEAELLVNIKEHVLVPEHELLTPELKKMLLQRYTVKETQLPRIQITDPIARYYG 180
Query: 660 LKRGQVVKITRKSQTADTYETYRYVV 737
+KRGQVVKI R S+TA Y TYRYVV
Sbjct: 181 MKRGQVVKIIRASETAGRYVTYRYVV 206
>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
gi|462414880|gb|EMJ19617.1| hypothetical protein
PRUPE_ppa011542mg [Prunus persica]
Length = 206
Score = 234 bits (596), Expect = 5e-59
Identities = 113/200 (56%), Positives = 155/200 (77%)
Frame = +3
Query: 138 ENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCKEKDPLD 317
E T+ +R+R+T+ +ML+DR Y V D EINM EQF +K+GE +KR+D I+K K D D
Sbjct: 7 EITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTKRSDSSD 66
Query: 318 QIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKCFNMDVF 497
QIYVFFPEEPKVGVK++K+Y+ RM S+ V A++V ++ L+P AK I +++ F+++VF
Sbjct: 67 QIYVFFPEEPKVGVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEISSKFHLEVF 126
Query: 498 EEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYGLKRGQV 677
+EA+LLVN+ +HVLVP+H +LT ++K LL+R+ V ET+LPRI V DP+AKYYGLKRGQV
Sbjct: 127 QEAELLVNIKEHVLVPEHLVLTTEEKKTLLERYTVKETQLPRIQVTDPIAKYYGLKRGQV 186
Query: 678 VKITRKSQTADTYETYRYVV 737
VKI R S+TA Y TYRYV+
Sbjct: 187 VKIIRPSETAGRYITYRYVI 206
>ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 206
Score = 233 bits (595), Expect = 7e-59
Identities = 116/200 (58%), Positives = 153/200 (76%)
Frame = +3
Query: 138 ENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCKEKDPLD 317
E T+ +RIR+T+ EMLRDR Y V D EINM QF K+GE +KR+D VI+K K+ P D
Sbjct: 7 EITRLYRIRKTVMEMLRDRNYLVGDFEINMSKHQFKEKYGENMKREDLVINKTKKDKPSD 66
Query: 318 QIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKCFNMDVF 497
QIYVFFPEE KVGVK++K+Y RM S+ VY AI+V + L+P A+ S+ +++ F+++VF
Sbjct: 67 QIYVFFPEEVKVGVKTMKTYINRMNSENVYRAILVCQTSLTPFARTSVAEISSKFHLEVF 126
Query: 498 EEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYGLKRGQV 677
+EA+LLVN+ HVLVP+H++LT +K LL+R+ V ET+LPRI V DPVA+YYGLKRGQV
Sbjct: 127 QEAELLVNIKDHVLVPEHQVLTDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQV 186
Query: 678 VKITRKSQTADTYETYRYVV 737
VKI R S+TA Y TYR+VV
Sbjct: 187 VKIIRPSETAGRYVTYRFVV 206
>ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 232 bits (591), Expect = 2e-58
Identities = 110/200 (55%), Positives = 154/200 (77%)
Frame = +3
Query: 138 ENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCKEKDPLD 317
E ++ FR+R+TL EML DRGY V D EINM +F+ K+GE +KR+D V+ K K + D
Sbjct: 7 ELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKYEFLQKYGENMKREDLVLQKAKRNNSSD 66
Query: 318 QIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKCFNMDVF 497
QIYVFFPEEPKVGVK++K+Y+ RM + V+ AI++V++ L+P A+ I +++ F+++VF
Sbjct: 67 QIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISIKFHLEVF 126
Query: 498 EEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYGLKRGQV 677
+EA++LVN+ HVL+PKH+ LT ++K LL+R+ V ET+LPRI + DP+A+YYGLKRGQV
Sbjct: 127 QEAEMLVNIKNHVLIPKHQTLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQV 186
Query: 678 VKITRKSQTADTYETYRYVV 737
VKI R S+TA Y TYRYVV
Sbjct: 187 VKIIRPSETAGRYVTYRYVV 206
>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 231 bits (590), Expect = 3e-58
Identities = 110/200 (55%), Positives = 154/200 (77%)
Frame = +3
Query: 138 ENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCKEKDPLD 317
E ++ FR+R+TL EML DRGY V D EINM QF+ K+GE +KR+D V+ K K + D
Sbjct: 7 ELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVLQKAKRNNSSD 66
Query: 318 QIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKCFNMDVF 497
QIYVFFPEEPKVGVK++K+Y+ RM + V+ AI++V++ L+P A+ I +++ F+++VF
Sbjct: 67 QIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTKFHLEVF 126
Query: 498 EEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYGLKRGQV 677
+EA++LVN+ HVL+P+H LL+ ++K LL+R+ V ET+LPRI + DP+A+YYGLKRGQV
Sbjct: 127 QEAEMLVNIKNHVLIPEHLLLSPEEKKSLLERYTVKETQLPRIQITDPIARYYGLKRGQV 186
Query: 678 VKITRKSQTADTYETYRYVV 737
VKI R S+TA Y TYRYVV
Sbjct: 187 VKIIRPSETAGRYITYRYVV 206
>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 253
Score = 231 bits (588), Expect = 4e-58
Identities = 113/199 (56%), Positives = 154/199 (77%)
Frame = +3
Query: 138 ENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCKEKDPLD 317
E T+ FRIRRT+ +MLRDR Y V D E+NM EQF K+GE +KR+D +I+K + D D
Sbjct: 7 EITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSRRNDSPD 66
Query: 318 QIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKCFNMDVF 497
QIYVFFPEE KVGVK++K+Y RM S+ V A++VV++ L+P A+ I +++ F+++VF
Sbjct: 67 QIYVFFPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTKFHLEVF 126
Query: 498 EEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYGLKRGQV 677
+EA+LLVN+ +HVLVP+H++LT ++K LL+R+ V ET+LPRI V DP+A+YYGLKRGQV
Sbjct: 127 QEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQV 186
Query: 678 VKITRKSQTADTYETYRYV 734
VKI R S+TA Y TYRYV
Sbjct: 187 VKIIRPSETAGRYITYRYV 205
>ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 206
Score = 231 bits (588), Expect = 4e-58
Identities = 114/200 (57%), Positives = 154/200 (77%)
Frame = +3
Query: 138 ENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCKEKDPLD 317
E T+ +RIR+T+ MLRDR Y V D E+NM +F K+GE +KR+D VI+K K+ P D
Sbjct: 7 EITRLYRIRKTVMVMLRDRNYLVGDFEVNMSKHEFKEKYGENMKREDLVINKTKKDKPSD 66
Query: 318 QIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKCFNMDVF 497
QIYVFFPEE KVGVK++K+Y+ RM S+ VY AI+V + L+P A+ I +V+ F+++VF
Sbjct: 67 QIYVFFPEEVKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCIAEVSSKFHLEVF 126
Query: 498 EEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYGLKRGQV 677
+EA+LLVN+ +HVLVP+H++LT+ +K LL+R+ V ET+LPRI V DPVA+YYGLKRGQV
Sbjct: 127 QEAELLVNIKEHVLVPEHQVLTETEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQV 186
Query: 678 VKITRKSQTADTYETYRYVV 737
VKI R S+TA Y TYR+VV
Sbjct: 187 VKIIRPSETAGRYVTYRFVV 206
>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 206
Score = 230 bits (587), Expect = 6e-58
Identities = 111/200 (55%), Positives = 156/200 (78%)
Frame = +3
Query: 138 ENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCKEKDPLD 317
E + FRIR+T+ +ML+DRGY V D EI M QF++K+GE +KR+D VI+K K D D
Sbjct: 7 EIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTKRNDNSD 66
Query: 318 QIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKCFNMDVF 497
QIYVFFP+E KVGVK++K+Y+ RM S+ V+ A++VV++ L+P A+ I +++ F+++VF
Sbjct: 67 QIYVFFPDEAKVGVKTMKTYTNRMKSENVFRAVLVVQQNLTPFARTCINEISSKFHLEVF 126
Query: 498 EEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYGLKRGQV 677
+E++LLVNV +H LVP+H++LT ++K LL+R+ V ET+LPRI V DP+A+YYGLKRGQV
Sbjct: 127 QESELLVNVKEHSLVPEHQVLTNEEKKTLLQRYTVKETQLPRIQVSDPIARYYGLKRGQV 186
Query: 678 VKITRKSQTADTYETYRYVV 737
VKI R S+TA Y TYRYVV
Sbjct: 187 VKIIRPSETAGRYVTYRYVV 206
>ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
Length = 208
Score = 229 bits (584), Expect = 1e-57
Identities = 115/202 (56%), Positives = 156/202 (77%), Gaps = 2/202 (0%)
Frame = +3
Query: 138 ENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCKEKDPLD 317
E T+ FRIR+T+++MLRDRGY V D EI+M EQF K+GE +KR+D VI+K K D D
Sbjct: 7 EITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSD 66
Query: 318 QIYV-FFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDV-NKCFNMD 491
Q+Y+ FFPEE KVG+K +K+Y+ RM S+ V+ AI+VV++ L+P A+ + + +K F+++
Sbjct: 67 QVYICFFPEEAKVGIKPLKTYTTRMKSENVFRAILVVQQNLTPFARACMSEATSKSFHLE 126
Query: 492 VFEEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYGLKRG 671
VF+EA+LLVN+ HVLVP+H+LL ++K LL+R+ V ET+LPRI V DPVA+YYGLKRG
Sbjct: 127 VFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRG 186
Query: 672 QVVKITRKSQTADTYETYRYVV 737
QVVKI R S+TA Y TYRYVV
Sbjct: 187 QVVKIIRPSETAGRYVTYRYVV 208
>ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
[Medicago truncatula] gi|355511987|gb|AES93610.1|
DNA-directed RNA polymerases I, II, and III subunit
RPABC1 [Medicago truncatula]
Length = 410
Score = 229 bits (584), Expect = 1e-57
Identities = 116/216 (53%), Positives = 158/216 (73%), Gaps = 1/216 (0%)
Frame = +3
Query: 93 AFLRTFSAKMSEFNGEN-TKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIK 269
AF T + K F+ E T+ +RIR+T+ +ML+DR Y V D E+NM F K+GE +K
Sbjct: 195 AFCDTTTKKTMVFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMK 254
Query: 270 RDDFVIHKCKEKDPLDQIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQA 449
R+D VI+K K+ P DQIYVFFPEE KVGVK++K+Y+ RM S+ VY AI+V + L+P A
Sbjct: 255 REDLVINKTKKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFA 314
Query: 450 KHSIIDVNKCFNMDVFEEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRIL 629
K + ++ F+++VF+EA+LLVN+ +HVLVP+H++L +K LL+R+ V ET+LPRI
Sbjct: 315 KTCVSEIASKFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQ 374
Query: 630 VDDPVAKYYGLKRGQVVKITRKSQTADTYETYRYVV 737
V DPVA+YYGLKRGQVVKI R S+TA Y TYR+VV
Sbjct: 375 VTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 410
>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 206
Score = 228 bits (582), Expect = 2e-57
Identities = 110/200 (55%), Positives = 155/200 (77%)
Frame = +3
Query: 138 ENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCKEKDPLD 317
E + RIR+T+ +ML+DRGY V D EI M EQF +K+G +KR+D VI+K K D D
Sbjct: 7 EIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDSSD 66
Query: 318 QIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKCFNMDVF 497
QIYVFFPEE KVGVK++K+Y+ RM S+ V+ AI+VV++ L+P A+ I +++ F+++VF
Sbjct: 67 QIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVF 126
Query: 498 EEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYGLKRGQV 677
+EA+LLVN+ +HVLVP+H++L+ ++K LL+R+ V ET+LPRI + DP+A+YYGLKRGQV
Sbjct: 127 QEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQV 186
Query: 678 VKITRKSQTADTYETYRYVV 737
VKI R S+TA Y TYRYV+
Sbjct: 187 VKIIRPSETAGRYVTYRYVI 206
>ref|XP_004967757.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Setaria italica]
Length = 207
Score = 228 bits (581), Expect = 3e-57
Identities = 108/207 (52%), Positives = 160/207 (77%), Gaps = 1/207 (0%)
Frame = +3
Query: 120 MSEFNGENTKFFRIRRTLYEMLRDRGYSVPD-DEINMKFEQFVAKHGEGIKRDDFVIHKC 296
M+ GE + +RIRRTL +ML DRGY + + D+I +K E F+ ++G+ ++RDD VI++
Sbjct: 1 MASSEGETNRLWRIRRTLMQMLLDRGYMILEKDDIGLKREAFIDRYGDPVRRDDLVINRY 60
Query: 297 KEKDPLDQIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNK 476
K+ DP DQIYVFFP EPK GVK++++Y +M + V+ I+VV++ LS A+ ++ +V++
Sbjct: 61 KKDDPADQIYVFFPNEPKPGVKTIRNYVEKMKQENVFAGILVVQQALSAFARSAVQEVSQ 120
Query: 477 CFNMDVFEEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYY 656
++++VF+EA+LLVN+ +HVLVP+HELLT DQK +LL+++ V ET+LPRI + DP+A+YY
Sbjct: 121 KYHLEVFQEAELLVNIKEHVLVPEHELLTLDQKKKLLEQYTVKETQLPRIQITDPIARYY 180
Query: 657 GLKRGQVVKITRKSQTADTYETYRYVV 737
G+KRGQVVKI R S+TA Y TYRYVV
Sbjct: 181 GMKRGQVVKIIRASETAGRYVTYRYVV 207
>ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis thaliana]
gi|75275037|sp|O81098.1|RPB5A_ARATH RecName:
Full=DNA-directed RNA polymerases II and IV subunit 5A;
Short=RPB5a; AltName: Full=DNA-directed RNA polymerase
II subunit E; AltName: Full=RNA polymerase I, II and III
24.3 kDa subunit; Short=AtRPB24.3
gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
[Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
polymerase I, II and III 24.3 kDa subunit [Arabidopsis
thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
NRPB5 [Arabidopsis thaliana]
Length = 205
Score = 228 bits (580), Expect = 4e-57
Identities = 106/200 (53%), Positives = 154/200 (77%)
Frame = +3
Query: 138 ENTKFFRIRRTLYEMLRDRGYSVPDDEINMKFEQFVAKHGEGIKRDDFVIHKCKEKDPLD 317
E + +RI++TL +MLRDRGY + D E+ M +QF+ KHG+ +KR+D V K K D D
Sbjct: 6 ELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRNDNSD 65
Query: 318 QIYVFFPEEPKVGVKSVKSYSIRMTSDKVYNAIIVVRKGLSPQAKHSIIDVNKCFNMDVF 497
Q+Y+FFP+E KVGVK++K Y+ RM S+ V+ AI+VV++ L+P A+ I +++ F+++VF
Sbjct: 66 QLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVF 125
Query: 498 EEAQLLVNVTKHVLVPKHELLTKDQKDELLKRFKVTETRLPRILVDDPVAKYYGLKRGQV 677
+EA++LVN+ +HVLVP+H++LT ++K LL+R+ V ET+LPRI V DP+A+Y+GLKRGQV
Sbjct: 126 QEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQV 185
Query: 678 VKITRKSQTADTYETYRYVV 737
VKI R S+TA Y TYRYVV
Sbjct: 186 VKIIRPSETAGRYVTYRYVV 205