BLASTX nr result
ID: Paeonia25_contig00010886
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00010886
(644 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containi... 77 5e-16
emb|CBI27814.3| unnamed protein product [Vitis vinifera] 77 5e-16
ref|XP_002534373.1| pentatricopeptide repeat-containing protein,... 83 5e-15
ref|XP_007215672.1| hypothetical protein PRUPE_ppa003913mg [Prun... 75 2e-13
ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containi... 76 6e-13
ref|XP_004238540.1| PREDICTED: pentatricopeptide repeat-containi... 60 7e-07
>ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 76.6 bits (187), Expect(2) = 5e-16
Identities = 45/88 (51%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = -1
Query: 260 LNKTKLVTLACVLAPTMDCACKVFRVMPERNNFLWSLKHSN*GYADLGPYQEAAVLYKII 81
L TKL+ AC LAPTMD A K+F MP+R+ FLW+ GYAD GP +EA LY +
Sbjct: 62 LLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIR--GYADAGPCEEALALYSNM 119
Query: 80 Q----LSCYHTFPFVVRSSGVVSALKEG 9
+TFPFVVRS V+SAL+EG
Sbjct: 120 HGAGLFPDNYTFPFVVRSCAVLSALREG 147
Score = 33.9 bits (76), Expect(2) = 5e-16
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2
Query: 379 FRTNYHSXXXXXXXXXXXXXXXLQGIHALILINGSHENLLLT 254
FRTNYHS L IHAL++ NG +NLLL+
Sbjct: 23 FRTNYHSRSFNYLLNCCSSLPDLSRIHALVVTNGCGQNLLLS 64
>emb|CBI27814.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 76.6 bits (187), Expect(2) = 5e-16
Identities = 45/88 (51%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = -1
Query: 260 LNKTKLVTLACVLAPTMDCACKVFRVMPERNNFLWSLKHSN*GYADLGPYQEAAVLYKII 81
L TKL+ AC LAPTMD A K+F MP+R+ FLW+ GYAD GP +EA LY +
Sbjct: 62 LLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIR--GYADAGPCEEALALYSNM 119
Query: 80 Q----LSCYHTFPFVVRSSGVVSALKEG 9
+TFPFVVRS V+SAL+EG
Sbjct: 120 HGAGLFPDNYTFPFVVRSCAVLSALREG 147
Score = 33.9 bits (76), Expect(2) = 5e-16
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2
Query: 379 FRTNYHSXXXXXXXXXXXXXXXLQGIHALILINGSHENLLLT 254
FRTNYHS L IHAL++ NG +NLLL+
Sbjct: 23 FRTNYHSRSFNYLLNCCSSLPDLSRIHALVVTNGCGQNLLLS 64
>ref|XP_002534373.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525413|gb|EEF28011.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 207
Score = 83.2 bits (204), Expect(2) = 5e-15
Identities = 48/88 (54%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Frame = -1
Query: 260 LNKTKLVTLACVLAPTMDCACKVFRVMPERNNFLWSLKHSN*GYADLGPYQEAAVLYKII 81
L TKL+T A L+ +MD A K+F MP+R+ FLW+ GYADLGPYQEA +LYK +
Sbjct: 59 LLSTKLITSASALSSSMDYARKLFDKMPQRDVFLWNTLIR--GYADLGPYQEAVMLYKTM 116
Query: 80 Q----LSCYHTFPFVVRSSGVVSALKEG 9
L +TFPFVVRS V+SALKEG
Sbjct: 117 HHDGFLPDNYTFPFVVRSCAVISALKEG 144
Score = 24.3 bits (51), Expect(2) = 5e-15
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -2
Query: 382 HF-RTNYHSXXXXXXXXXXXXXXXLQGIHALILINGSHENLLLT 254
HF + NYHS L+ HAL + G H +LLL+
Sbjct: 18 HFPKNNYHSLALNCLLNSCSSLSHLKLTHALTITTGFHNSLLLS 61
>ref|XP_007215672.1| hypothetical protein PRUPE_ppa003913mg [Prunus persica]
gi|462411822|gb|EMJ16871.1| hypothetical protein
PRUPE_ppa003913mg [Prunus persica]
Length = 540
Score = 75.5 bits (184), Expect(2) = 2e-13
Identities = 47/88 (53%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Frame = -1
Query: 260 LNKTKLVTLACVLAPTMDCACKVFRVMPERNNFLWSLKHSN*GYADLGPYQEAAVLYKII 81
L TKLVTLA +APTMD A K+F MP+R+ FLW+ GYAD GP EA VLY+ +
Sbjct: 63 LLSTKLVTLASSMAPTMDYARKLFDTMPKRDAFLWNTLIR--GYADRGPCHEAIVLYRNM 120
Query: 80 QLSCY----HTFPFVVRSSGVVSALKEG 9
S +TFPFVVRS V AL+EG
Sbjct: 121 HHSGLSPDNYTFPFVVRSCTVQLALREG 148
Score = 26.2 bits (56), Expect(2) = 2e-13
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 370 NYHSXXXXXXXXXXXXXXXLQGIHALILINGSHENLLLT 254
+YHS L+ IHALI +GS++NLLL+
Sbjct: 27 SYHSLPFNYFFNSCSSFSDLKCIHALIFQHGSNQNLLLS 65
>ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum tuberosum]
Length = 608
Score = 75.9 bits (185), Expect(2) = 6e-13
Identities = 42/85 (49%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Frame = -1
Query: 251 TKLVTLACVLAPTMDCACKVFRVMPERNNFLWSLKHSN*GYADLGPYQEAAVLYKIIQLS 72
TK+V+L C L+PTMD A K+F MP+R+ F W+ GY++LGP QE+ LYK + L
Sbjct: 69 TKIVSLGCFLSPTMDYARKLFDQMPQRDVFAWNTLIR--GYSNLGPCQESIFLYKEMHLQ 126
Query: 71 CY----HTFPFVVRSSGVVSALKEG 9
+TFPFV+RS V+SAL+EG
Sbjct: 127 GILPDNYTFPFVLRSCSVLSALREG 151
Score = 24.3 bits (51), Expect(2) = 6e-13
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 304 IHALILINGSHENLLLTKQNSSL 236
+H L+L G H+NLL+ + SL
Sbjct: 52 LHTLVLTTGYHKNLLICTKIVSL 74
>ref|XP_004238540.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum lycopersicum]
Length = 617
Score = 59.7 bits (143), Expect = 7e-07
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Frame = -1
Query: 212 MDCACKVFRVMPERNNFLWSLKHSN*GYADLGPYQEAAVLYKIIQLSCY----HTFPFVV 45
MD A K+F MP+R+ F W+ GY++LGP QE+ LYK + L +TFPFV+
Sbjct: 1 MDYARKLFDQMPQRDVFAWNTLIR--GYSNLGPCQESIFLYKELHLQGVLPDNYTFPFVL 58
Query: 44 RSSGVVSALKEG 9
RS V+SALKEG
Sbjct: 59 RSCSVLSALKEG 70