BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00010599
         (1190 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   548   e-153
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   545   e-152
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...   545   e-152
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor...   539   e-150
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...   531   e-148
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...   527   e-147
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   525   e-146
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   525   e-146
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   525   e-146
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   525   e-146
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...   521   e-145
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu...   520   e-145
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s...   517   e-144
ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas...   514   e-143
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...   514   e-143
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo...   503   e-140
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...   503   e-140
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...   494   e-137
ref|XP_004306240.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   493   e-137
gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus...   491   e-136

>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  548 bits (1412), Expect = e-153
 Identities = 291/416 (69%), Positives = 332/416 (79%), Gaps = 21/416 (5%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGSPINISQMIACVGQQSVGGRRAP+GFIDR+LPHFPR SKTP AKGFVA+SFY+GLT
Sbjct: 781  GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLT 840

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTADTGYM+RRLMK+LEDLSIQYD TVRNANG IVQF YG
Sbjct: 841  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYG 900

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDG+DPA+MEGKDG PLNF+RLF+KVKATCP  +   LS  +I++ + KR  E +T+ E 
Sbjct: 901  DDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETV-KRLKEHNTSAE- 958

Query: 648  GCSAAFIESLSKFMGFAKGTF---------------------CEKGAQNISGITSKQLQV 532
            GCS AF  +LS F+   K  F                      EK A+NISGITSKQLQV
Sbjct: 959  GCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQV 1018

Query: 531  FLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEI 352
            FLDTCISRY  KRIEAGT IGAIGAHSI EPGTQMTLKTFHFAGVAS NVTLG PR+KEI
Sbjct: 1019 FLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI 1078

Query: 351  VLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLD 172
            + G+K IS P+ITA LEC++N K A++VKGRIERT LGQVAKSIKIV+T R   + V LD
Sbjct: 1079 INGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALD 1138

Query: 171  LKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQVDRSKLHFEL 4
            ++ I+ASQL ID+N V+++IL+  RIK KQ  IKVL+  KLE+ PQ DRS +HFEL
Sbjct: 1139 MEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIHFEL 1194


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score =  545 bits (1404), Expect = e-152
 Identities = 276/413 (66%), Positives = 327/413 (79%), Gaps = 18/413 (4%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGSPINISQM+ACVGQQSVGGRRAPNGFIDRSLPHFPR +K PAAKGFVANSFYSGL+
Sbjct: 794  GSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFVANSFYSGLS 853

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTADTGYM+RRL+K+LEDLSIQYD +VRNA G IVQF YG
Sbjct: 854  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNAGGCIVQFLYG 913

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDG+DPA MEGK G PLNFDRL MKVKATCPP    +LSP+++ + ++K+ +      + 
Sbjct: 914  DDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQLA---AYGKE 970

Query: 648  GCSAAFIESLSKF-----------------MGF-AKGTFCEKGAQNISGITSKQLQVFLD 523
             CS AF+ SL KF                 +G+  K    E+     SGIT KQL+VF+ 
Sbjct: 971  SCSEAFLNSLRKFFEGQQDKLDKKIKFVEDIGWDDKSQILEEVTHKTSGITEKQLEVFIQ 1030

Query: 522  TCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVLG 343
            TC SRYH KR+EAGT IGAIGA SI EPGTQMTLKTFHFAGVAS N+T G PR+KEI+ G
Sbjct: 1031 TCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIING 1090

Query: 342  SKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLKR 163
            +K IS P+ITA LEC+DNE AA++VKGRIE+T+LGQVAKSIKIVMT R  S+V+ LD++ 
Sbjct: 1091 AKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMET 1150

Query: 162  IEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQVDRSKLHFEL 4
            I+ + LCI+A+ VK++I+Q P+IK KQ  IKVL+ +KLEI P VD+SK+HFEL
Sbjct: 1151 IQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFEL 1203


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score =  545 bits (1404), Expect = e-152
 Identities = 276/413 (66%), Positives = 327/413 (79%), Gaps = 18/413 (4%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGSPINISQM+ACVGQQSVGGRRAPNGFIDRSLPHFPR +K PAAKGFVANSFYSGL+
Sbjct: 787  GSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFVANSFYSGLS 846

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTADTGYM+RRL+K+LEDLSIQYD +VRNA G IVQF YG
Sbjct: 847  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNAGGCIVQFLYG 906

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDG+DPA MEGK G PLNFDRL MKVKATCPP    +LSP+++ + ++K+ +      + 
Sbjct: 907  DDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQLA---AYGKE 963

Query: 648  GCSAAFIESLSKF-----------------MGF-AKGTFCEKGAQNISGITSKQLQVFLD 523
             CS AF+ SL KF                 +G+  K    E+     SGIT KQL+VF+ 
Sbjct: 964  SCSEAFLNSLRKFFEGQQDKLDKKIKFVEDIGWDDKSQILEEVTHKTSGITEKQLEVFIQ 1023

Query: 522  TCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVLG 343
            TC SRYH KR+EAGT IGAIGA SI EPGTQMTLKTFHFAGVAS N+T G PR+KEI+ G
Sbjct: 1024 TCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIING 1083

Query: 342  SKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLKR 163
            +K IS P+ITA LEC+DNE AA++VKGRIE+T+LGQVAKSIKIVMT R  S+V+ LD++ 
Sbjct: 1084 AKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMET 1143

Query: 162  IEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQVDRSKLHFEL 4
            I+ + LCI+A+ VK++I+Q P+IK KQ  IKVL+ +KLEI P VD+SK+HFEL
Sbjct: 1144 IQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFEL 1196


>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
          Length = 1179

 Score =  539 bits (1388), Expect = e-150
 Identities = 278/417 (66%), Positives = 328/417 (78%), Gaps = 22/417 (5%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGS INISQM+ACVGQQSVGGRRAPNGFIDRSLPHFPR  KTPAAKGFV++SFY GL+
Sbjct: 567  GSKGSLINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKDKTPAAKGFVSHSFYDGLS 626

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTADTGYM+RRL+K+LEDL + YD TVRNA+  I+QFCYG
Sbjct: 627  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLFVHYDNTVRNASACIIQFCYG 686

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDG+DPA MEGK+GAPLNF+RLF+K KATCP      LSPE++ + ++ R S++D TPEG
Sbjct: 687  DDGMDPAHMEGKNGAPLNFERLFLKAKATCPAGGTEKLSPEKVSELVESRLSKKDMTPEG 746

Query: 648  GCSAAFIESLSKFM------------------GFAK---GTFCEKGAQNISGITSKQLQV 532
            GCSAAF  SL  F+                  G AK       +     +SG T++QL+V
Sbjct: 747  GCSAAFKNSLKSFLDNYVKAFKRTWDPCESTEGHAKMENSATTKNIVLQLSGATARQLEV 806

Query: 531  FLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEI 352
            FLDTCISRYHSK+IEAGT IGAIGA SI EPGTQMTLKTFHFAGVAS NVTLG PR+KEI
Sbjct: 807  FLDTCISRYHSKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI 866

Query: 351  VLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLD 172
            + G+K IS P+ITA LECD+N   A+IV+GRIE+  LGQVAKSIK VMT R  SVV+TLD
Sbjct: 867  INGAKKISTPIITAILECDNNVNFARIVRGRIEKISLGQVAKSIKTVMTSRVASVVITLD 926

Query: 171  LKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIP-QVDRSKLHFEL 4
            ++RI+ + L IDAN V+D+ILQ PRIK K+  I+VL+ KKLEI+P + +RSKL+  L
Sbjct: 927  MERIQDALLSIDANVVRDSILQTPRIKLKKEHIRVLDFKKLEILPYESNRSKLYHHL 983


>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
            max]
          Length = 1391

 Score =  531 bits (1369), Expect = e-148
 Identities = 280/415 (67%), Positives = 325/415 (78%), Gaps = 20/415 (4%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGS INISQM+ACVGQQSVGGRR PNGFIDRSLPHFPR SKTPAAKGFVANSFYSGL+
Sbjct: 787  GSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLS 846

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTADTGYM+R+LMKSLEDL + YD TVRNA G IVQFCYG
Sbjct: 847  ATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYTVRNAGGSIVQFCYG 906

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCP-PRDPTFLSPEEIKQAMDKRFSERDTTP- 655
            DDG+DPA MEGK+G PLNF+RLF+K KA CP   D   LS  ++ + + ++ SE D +  
Sbjct: 907  DDGMDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSDVSKVVHEKLSEFDMSRL 966

Query: 654  ------EGGCSAAFIESLSKFM---------GFA--KGTFCEKGAQNISGITSKQLQVFL 526
                  E G SA F+ESL  F+         GF        +K  Q ISGIT KQL VFL
Sbjct: 967  AEKGVFEVGFSADFVESLQSFIKDNAKLTEEGFTDEHSQNLKKFGQRISGITRKQLDVFL 1026

Query: 525  DTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVL 346
            + C+SRYHSK++EAG P+GA GAHSI EPGTQMTLKTFHFAGVAS NVTLG PRVKEI+ 
Sbjct: 1027 NICLSRYHSKKMEAGAPVGATGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRVKEIMN 1086

Query: 345  GSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLK 166
            G+K IS P+ITA LE DDN   A+IVKGRIE+T LGQVAKSIK+VMT RS SVV+TLD+K
Sbjct: 1087 GNKKISTPIITAILERDDNANTARIVKGRIEKTNLGQVAKSIKVVMTSRSASVVITLDMK 1146

Query: 165  RIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQ-VDRSKLHFEL 4
            RI+ + L IDAN VK++IL+  + K K   IK+L++KKLE++PQ VDRSK+HF+L
Sbjct: 1147 RIQDAHLNIDANIVKESILRTKKTKLKPEHIKILDIKKLEVVPQDVDRSKIHFQL 1201


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
            gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
            [Theobroma cacao]
          Length = 1395

 Score =  527 bits (1357), Expect = e-147
 Identities = 278/411 (67%), Positives = 319/411 (77%), Gaps = 16/411 (3%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGS INISQMIACVGQQSVGGRRAPNGFIDRSLPHF R SKTPAAKGFVANSFYSGLT
Sbjct: 787  GSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLT 846

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTM GREGLVDTAVKTA+TGYM+RRL+K+LEDLSI YD TVRNA+G IVQF YG
Sbjct: 847  ATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNASGCIVQFIYG 906

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDG+DPA MEGK G PLNFDRL MKVKATCPP +   L    I Q ++++ ++ D  P G
Sbjct: 907  DDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIMQMLEEQLAKHD--PAG 964

Query: 648  GCSAAFIESLSKFMG----------------FAKGTFCEKGAQNISGITSKQLQVFLDTC 517
             CS AF +SL  F+                   K    EK    ISGI+ +QL+VF+ TC
Sbjct: 965  VCSEAFKKSLKGFLKSQTNELDRVMKLVNNCAQKSEILEKVGHKISGISDRQLEVFVSTC 1024

Query: 516  ISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVLGSK 337
            ISRY SK IEAGT IGAIGA SI EPGTQMTLKTFHFAGVAS N+T G PR+KEI+  +K
Sbjct: 1025 ISRYRSKVIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAK 1084

Query: 336  NISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLKRIE 157
             IS PVITA LE DDN   AQIVKGRIE+TVLGQVAKSIKIV+T RS SVV+TLD++ I 
Sbjct: 1085 RISTPVITAELEFDDNPNIAQIVKGRIEKTVLGQVAKSIKIVITSRSASVVITLDMEIIL 1144

Query: 156  ASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQVDRSKLHFEL 4
             ++L IDAN VK++ILQ P+IK K+  +KVL+ +KLE++P  DRS++HFEL
Sbjct: 1145 DAELYIDANIVKESILQTPKIKLKEQHVKVLDGRKLEVVPPADRSQIHFEL 1195


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Solanum tuberosum]
          Length = 1243

 Score =  525 bits (1353), Expect = e-146
 Identities = 274/418 (65%), Positives = 320/418 (76%), Gaps = 23/418 (5%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP  SK PAAKGFVA+SF+ GL+
Sbjct: 776  GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLS 835

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTADTGYM+RRLMK+LEDL++ YD TVRNA+  IVQF YG
Sbjct: 836  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYG 895

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDG+DP+QME K G PLNF RLFMKVKATCPP     LS  EI + +++R S  D TPEG
Sbjct: 896  DDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEG 955

Query: 648  GCSAAFIESLSKFM-----------------------GFAKGTFCEKGAQNISGITSKQL 538
            GCS AF  SLS F+                       G  +G + EK A NISGIT +QL
Sbjct: 956  GCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRG-YLEKIALNISGITKRQL 1014

Query: 537  QVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVK 358
            QVFL+TCISRYH KR+EAGT IGAIGA SI EPGTQMTLKTFHFAGVAS NVTLG PR+K
Sbjct: 1015 QVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1074

Query: 357  EIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVT 178
            EI+  +K I+ P+IT  L    N  AA+++K RIE+T+LGQVAKS+KIV+  R  S+ ++
Sbjct: 1075 EIINAAKKITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAIS 1134

Query: 177  LDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQVDRSKLHFEL 4
            LD++ I+ SQLCIDA  VK +ILQ  +IK K+  IKVLN +KLE+ PQ ++ KLHFEL
Sbjct: 1135 LDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFEL 1192


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score =  525 bits (1353), Expect = e-146
 Identities = 274/418 (65%), Positives = 320/418 (76%), Gaps = 23/418 (5%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP  SK PAAKGFVA+SF+ GL+
Sbjct: 776  GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLS 835

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTADTGYM+RRLMK+LEDL++ YD TVRNA+  IVQF YG
Sbjct: 836  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYG 895

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDG+DP+QME K G PLNF RLFMKVKATCPP     LS  EI + +++R S  D TPEG
Sbjct: 896  DDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEG 955

Query: 648  GCSAAFIESLSKFM-----------------------GFAKGTFCEKGAQNISGITSKQL 538
            GCS AF  SLS F+                       G  +G + EK A NISGIT +QL
Sbjct: 956  GCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRG-YLEKIALNISGITKRQL 1014

Query: 537  QVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVK 358
            QVFL+TCISRYH KR+EAGT IGAIGA SI EPGTQMTLKTFHFAGVAS NVTLG PR+K
Sbjct: 1015 QVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1074

Query: 357  EIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVT 178
            EI+  +K I+ P+IT  L    N  AA+++K RIE+T+LGQVAKS+KIV+  R  S+ ++
Sbjct: 1075 EIINAAKKITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAIS 1134

Query: 177  LDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQVDRSKLHFEL 4
            LD++ I+ SQLCIDA  VK +ILQ  +IK K+  IKVLN +KLE+ PQ ++ KLHFEL
Sbjct: 1135 LDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFEL 1192


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score =  525 bits (1352), Expect = e-146
 Identities = 274/418 (65%), Positives = 320/418 (76%), Gaps = 23/418 (5%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP  SK PAAKGFVA+SF+ GL+
Sbjct: 776  GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLS 835

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTADTGYM+RRLMK+LEDL++ YD TVRNA+  IVQF YG
Sbjct: 836  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYG 895

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDG+DP++ME K G PLNF RLFMKVKATCPP     LS  EI + +++R S  D TPEG
Sbjct: 896  DDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEG 955

Query: 648  GCSAAFIESLSKFM-----------------------GFAKGTFCEKGAQNISGITSKQL 538
            GCS AF  SLS F+                       G  +G + EK   NISGIT KQL
Sbjct: 956  GCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRG-YLEKIVLNISGITKKQL 1014

Query: 537  QVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVK 358
            QVFL+TCISRYH KR+EAGT IGAIGA SI EPGTQMTLKTFHFAGVAS NVTLG PR+K
Sbjct: 1015 QVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1074

Query: 357  EIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVT 178
            EI+  +K I+ P+ITA L    N  AA+++K RIE+T+LGQVAKS+KIV+  R  S+ ++
Sbjct: 1075 EIINAAKKITTPIITAKLLSAGNLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAIS 1134

Query: 177  LDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQVDRSKLHFEL 4
            LD++ I+ SQLCIDA  VK +ILQ  +IK K+  IKVLN +KLE+ PQ ++ KLHFEL
Sbjct: 1135 LDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFEL 1192


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  525 bits (1351), Expect = e-146
 Identities = 271/426 (63%), Positives = 321/426 (75%), Gaps = 31/426 (7%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGSPINISQM+ACVGQQSVGGRRAP+GFIDRSLPHF R +KTPAAKGFVANSFYSGLT
Sbjct: 781  GSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFYSGLT 840

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTADTGYM+RRL+K+LEDLSI YD +VRNA G IVQFCYG
Sbjct: 841  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYG 900

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDG+DPAQMEGK GAPLNF+RLF+K KATCP      LSP E  + ++ R S+ D +PE 
Sbjct: 901  DDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETVEDRLSKDDASPEC 960

Query: 648  GCSAAFIESLSKFMG-------FAKGTFC-----------------------EKGAQNIS 559
            GCS AF+ SL  F+         + GT                          K  QNI+
Sbjct: 961  GCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISSSDNDNIVIRNKVVQNIA 1020

Query: 558  GITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVT 379
            G+T +QLQVFLDTC+SRYH+K+IEAGT IGAIGA SI EPGTQMTLKTFHFAGVAS NVT
Sbjct: 1021 GVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVT 1080

Query: 378  LGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPR 199
            LG PR+KEI+ G+K IS P++TA L  DDN   A++VK RIE+T LGQ+AK I+IVM+ R
Sbjct: 1081 LGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSR 1140

Query: 198  SGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQ-VDRS 22
            S  + + LD+++I  ++L +DAN VK AIL  P++K K   I VL+ +KL ++PQ  DR+
Sbjct: 1141 SALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDADRN 1200

Query: 21   KLHFEL 4
            KLHF L
Sbjct: 1201 KLHFNL 1206


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1394

 Score =  521 bits (1342), Expect = e-145
 Identities = 278/425 (65%), Positives = 315/425 (74%), Gaps = 30/425 (7%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGSPINISQMIACVGQQSVGG RAP+GFIDRSLPHFPR SKTPAAKGFVANSFYSGL+
Sbjct: 788  GSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLS 847

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTADTGYMARRL K LEDL +QYD TV++A GGIVQF YG
Sbjct: 848  ATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQDAGGGIVQFLYG 907

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDGLDPA MEGK G PLNFDRLFMKVKATC   +  +LSP +I   +     + + T +G
Sbjct: 908  DDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDISNIVQSLLLKHNGTLDG 967

Query: 648  GCSAAFIESLSKFMG-FAKGTFC-----------------------------EKGAQNIS 559
             CS +F +SLS F+G  AK   C                             EK AQ +S
Sbjct: 968  ICSESFRKSLSSFLGDQAKRLECLMKLVDGVEVENFENIKNVEGLTGISKNTEKIAQKVS 1027

Query: 558  GITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVT 379
            GIT KQL+VFL TC+ RY  KRIE GT IGAIGA SI EPGTQMTLKTFHFAGVAS N+T
Sbjct: 1028 GITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNIT 1087

Query: 378  LGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPR 199
             G PR+KEI+ G+K IS P+IT  LE + N  AA+I+KGRI++TVLGQVAKSIKIVMT R
Sbjct: 1088 QGVPRIKEIINGAKRISTPIITVELEHNSNVNAARIIKGRIQKTVLGQVAKSIKIVMTSR 1147

Query: 198  SGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQVDRSK 19
            S SV VTLD+K I  +QL +DAN V++ IL+ P+IK K   I VL   KLE+ P  DR+K
Sbjct: 1148 SASVKVTLDMKTIREAQLSLDANIVRELILETPKIKRKLQRINVLEDGKLEVFPGGDRNK 1207

Query: 18   LHFEL 4
            LHFEL
Sbjct: 1208 LHFEL 1212


>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
            communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
            polymerase III largest subunit, putative [Ricinus
            communis]
          Length = 1383

 Score =  520 bits (1340), Expect = e-145
 Identities = 274/424 (64%), Positives = 318/424 (75%), Gaps = 29/424 (6%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGS INISQM+ACVGQQSVGGRRAP+GFIDRSLPHFPR SKTPAAKGFVANSFYSGL 
Sbjct: 762  GSKGSVINISQMVACVGQQSVGGRRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLM 821

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTM GREGLVDTAVKTADTGYM+RRL+K LEDLSIQYD TVRNA+G IVQF YG
Sbjct: 822  ATEFFFHTMAGREGLVDTAVKTADTGYMSRRLIKGLEDLSIQYDNTVRNASGCIVQFLYG 881

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDGLDPA MEGK G PLN DRLF KVKATCP R+  +LSP +I   ++    + D    G
Sbjct: 882  DDGLDPASMEGKGGVPLNLDRLFSKVKATCPVREEDYLSPLDISDVVENLLLKHDMALGG 941

Query: 648  GCSAAFIESLSKFMG-----------FAKGT------------------FCEKGAQNISG 556
             CS AF +SL+ F+G            A G                     E+ A  I G
Sbjct: 942  ICSEAFKKSLTSFLGSHAKRLESMMKLADGVEDPTSENIQTGGIRGNSKIIERLAHKIFG 1001

Query: 555  ITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTL 376
            ++ +Q++VF+ TCI+RY  KR+E GT IGAIGA SI EPGTQMTLKTFHFAGVAS N+T 
Sbjct: 1002 VSERQIEVFVKTCINRYLWKRVEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQ 1061

Query: 375  GFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRS 196
            G PR+KEI+ G+K IS P+ITA LE + N  AA+I KGRI++TVLGQVAKSIKIVMT RS
Sbjct: 1062 GVPRIKEIINGAKKISTPIITAELEQNTNVTAARIAKGRIQKTVLGQVAKSIKIVMTSRS 1121

Query: 195  GSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQVDRSKL 16
             SVV+TLD+K I+ +QL +DAN VK+AIL+ PRIK K   IKVL+ +KLE+IP  DR ++
Sbjct: 1122 ASVVITLDMKTIQNAQLSLDANIVKEAILRTPRIKLKPQHIKVLDTRKLEVIPLGDRERV 1181

Query: 15   HFEL 4
            HFEL
Sbjct: 1182 HFEL 1185


>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Fragaria vesca subsp. vesca]
          Length = 1390

 Score =  517 bits (1331), Expect = e-144
 Identities = 267/417 (64%), Positives = 313/417 (75%), Gaps = 22/417 (5%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGS INISQM+ACVGQQSVGGRRAPNGFIDRSLPHFPR   TPAAKGFVA+SFYSGLT
Sbjct: 783  GSKGSAINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKVNTPAAKGFVASSFYSGLT 842

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTADTGYM+RRL K LEDLS+QYD TVR ANGGIVQFCYG
Sbjct: 843  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLSKVLEDLSVQYDKTVRAANGGIVQFCYG 902

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDG+DPA MEGK GAPL+F RLF + KATCP  +   LSP+E+ + +  R SE+D TP+G
Sbjct: 903  DDGMDPAMMEGKSGAPLDFYRLFFRAKATCPAGESESLSPDEVSEIVRSRLSEQDMTPDG 962

Query: 648  GCSAAFIESLSKFMG---------------------FAKGTFCEKGAQNISGITSKQLQV 532
            GCS  F  S+ +F+                        K    +   QNISG+T +QL+V
Sbjct: 963  GCSMGFKSSIEQFLDEYVKALRKTQEAFLLNQSPGWEVKSATLQNIVQNISGVTPRQLKV 1022

Query: 531  FLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEI 352
            FLDTCISRYHSK+++AGT IG IGA SI EPGTQMTLKTFHFAGVAS NVTLG PR+KEI
Sbjct: 1023 FLDTCISRYHSKKVDAGTAIGVIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI 1082

Query: 351  VLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLD 172
            + G+KNI  P+IT  LECD+N   A++V GRIE+T LGQVA+ I+IVM+PR+  V V LD
Sbjct: 1083 INGAKNIHTPIITTVLECDNNPMIARMVAGRIEKTNLGQVAECIEIVMSPRAAYVEVKLD 1142

Query: 171  LKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEI-IPQVDRSKLHFEL 4
            +  I+ + L IDAN VK +IL  PRIK K   I+V + + +E+   + DR KLHF L
Sbjct: 1143 MAVIQDAHLSIDANVVKQSILGTPRIKLKHEHIRVPDNQTVEVHSHEKDRRKLHFHL 1199


>ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
            gi|561005141|gb|ESW04135.1| hypothetical protein
            PHAVU_011G070100g [Phaseolus vulgaris]
          Length = 1392

 Score =  514 bits (1323), Expect = e-143
 Identities = 271/416 (65%), Positives = 323/416 (77%), Gaps = 20/416 (4%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGSPINISQM+ACVGQQSVGGRRAPNGF+DRSLPHFP N+KTPAAKGFVANSFYSGL+
Sbjct: 784  GSKGSPINISQMVACVGQQSVGGRRAPNGFLDRSLPHFPLNAKTPAAKGFVANSFYSGLS 843

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTADTGYM+R+LMKS+EDL + YD TVRNA G IVQFCYG
Sbjct: 844  ATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHYDYTVRNAGGSIVQFCYG 903

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPR-DPTFLSPEEIKQAMDKRFSERDTTP- 655
            DDG+DP  MEGK+G PLNF+RLF+K KA CP + D   LS  ++ + + ++ SE   +  
Sbjct: 904  DDGMDPGGMEGKNGKPLNFERLFLKSKAICPNKDDDEVLSSSDVCKVVQEKLSEFGVSRE 963

Query: 654  ------EGGCSAAFIESLSKFM----GFAKGTFCEKGAQ-------NISGITSKQLQVFL 526
                  E G SA F++SL  F+       + TF +  +Q        ISGIT  QL+VFL
Sbjct: 964  VEKGVLEVGFSADFVQSLQSFIKDNTKLTEETFTDDNSQILKKFGERISGITRAQLEVFL 1023

Query: 525  DTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVL 346
            + C+SRYHSK+IEAG P+GA GAHSI EPGTQMTLKTFHFAGVAS NVTLG PRVKEI+ 
Sbjct: 1024 NICLSRYHSKKIEAGAPVGATGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRVKEIMN 1083

Query: 345  GSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLK 166
            G+K IS P+ITA LE  D    A+IVKGRIE+T LGQVAKSIK+V+T R  SVV+TLD++
Sbjct: 1084 GNKKISTPIITAILERTDCANTARIVKGRIEKTNLGQVAKSIKVVVTSRLASVVITLDME 1143

Query: 165  RIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQ-VDRSKLHFELS 1
            RI+ + L IDAN VK++ILQ  + K K   IK+L+VKKL ++PQ  DRSKLHF+L+
Sbjct: 1144 RIQDAHLNIDANIVKESILQTKKAKLKPEHIKILDVKKLRVVPQDGDRSKLHFQLN 1199


>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
            gi|548832896|gb|ERM95665.1| hypothetical protein
            AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score =  514 bits (1323), Expect = e-143
 Identities = 268/421 (63%), Positives = 317/421 (75%), Gaps = 26/421 (6%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRN KTPAAKGFVANSFY+GLT
Sbjct: 775  GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLT 834

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            A EFFFHTMGGREGLVDTAVKTADTGY++RRL+KSLEDLS  YD TVRN++G I+QF YG
Sbjct: 835  AAEFFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYG 894

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDG+DPA+MEGK G PLN DRLFMK+KATCP      LSP EI   ++ R S+ D TPE 
Sbjct: 895  DDGMDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTPER 954

Query: 648  GCSAAFIESLSKF---------------------MGFAKGTFCEKGAQNISGITSKQLQV 532
            GCS AF E LS F                     +   K +  E  A NISGI+ +QL+V
Sbjct: 955  GCSMAFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLEHVAANISGISRQQLRV 1014

Query: 531  FLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEI 352
            FL+TCISRYH KRIEAGT IGAIGA SI EPGTQMTLKTFHFAGVAS N+TLG PR+KEI
Sbjct: 1015 FLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEI 1074

Query: 351  VLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLD 172
            +  SK IS P+ITA L CD++EK+A+IVKGRIE+T+LG+VAK++KI +TP   S+ +TLD
Sbjct: 1075 LGASKKISTPIITATLVCDNDEKSARIVKGRIEKTLLGEVAKTVKISVTPTQASINITLD 1134

Query: 171  LKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKV-----LNVKKLEIIPQVDRSKLHFE 7
            +KRIEA Q+ IDA  V D+I +  + K  +  +KV     L  K   ++P++ R ++ + 
Sbjct: 1135 MKRIEALQMAIDAKTVADSISENLKAKVSRTKLKVKPTFTLPDKLKILLPEIGRKEVLYS 1194

Query: 6    L 4
            L
Sbjct: 1195 L 1195


>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
          Length = 1321

 Score =  503 bits (1295), Expect = e-140
 Identities = 264/417 (63%), Positives = 317/417 (76%), Gaps = 22/417 (5%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGSPINISQM+ACVGQQSVGGRRAPNGFIDR+LPHFP NSKTPAAKGFVANSFY+GLT
Sbjct: 713  GSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLT 772

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTA+TGYM+RRLMK LEDLS+ YD TVRNA+GGIVQF YG
Sbjct: 773  ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYG 832

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDG+DPA+MEGKDG PLN D+LFMKV ATCP R    LSP EI Q ++ + SE D + + 
Sbjct: 833  DDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDD 892

Query: 648  GCSAAFIESLSKFM---------------------GFAKGTFCEKGAQNISGITSKQLQV 532
            GCS  F + L+ F+                     G    +F E  A NISGI+ KQLQV
Sbjct: 893  GCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVKQLQV 952

Query: 531  FLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEI 352
            FLDTC+SRYH K+IEAG  IGAIGA SI EPGTQMTLKTFHFAGVAS NVTLG PR+KEI
Sbjct: 953  FLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI 1012

Query: 351  VLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLD 172
            +  +K IS P+ITA L  + +  +A+IVKG +E+ VLG+VA++IKIV+     ++VV LD
Sbjct: 1013 INAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLD 1072

Query: 171  LKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQ-VDRSKLHFEL 4
            ++RIEA  + I A++V+ +IL  P+IK K   ++V++  KL I P  +D+SKL +EL
Sbjct: 1073 MQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYEL 1129


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score =  503 bits (1295), Expect = e-140
 Identities = 264/417 (63%), Positives = 317/417 (76%), Gaps = 22/417 (5%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGSPINISQM+ACVGQQSVGGRRAPNGFIDR+LPHFP NSKTPAAKGFVANSFY+GLT
Sbjct: 775  GSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLT 834

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTA+TGYM+RRLMK LEDLS+ YD TVRNA+GGIVQF YG
Sbjct: 835  ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYG 894

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDG+DPA+MEGKDG PLN D+LFMKV ATCP R    LSP EI Q ++ + SE D + + 
Sbjct: 895  DDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDD 954

Query: 648  GCSAAFIESLSKFM---------------------GFAKGTFCEKGAQNISGITSKQLQV 532
            GCS  F + L+ F+                     G    +F E  A NISGI+ KQLQV
Sbjct: 955  GCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVKQLQV 1014

Query: 531  FLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEI 352
            FLDTC+SRYH K+IEAG  IGAIGA SI EPGTQMTLKTFHFAGVAS NVTLG PR+KEI
Sbjct: 1015 FLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI 1074

Query: 351  VLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLD 172
            +  +K IS P+ITA L  + +  +A+IVKG +E+ VLG+VA++IKIV+     ++VV LD
Sbjct: 1075 INAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLD 1134

Query: 171  LKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQ-VDRSKLHFEL 4
            ++RIEA  + I A++V+ +IL  P+IK K   ++V++  KL I P  +D+SKL +EL
Sbjct: 1135 MQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYEL 1191


>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
            italica]
          Length = 1397

 Score =  494 bits (1271), Expect = e-137
 Identities = 262/417 (62%), Positives = 313/417 (75%), Gaps = 22/417 (5%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGSPINISQM+ACVGQQSVGGRRAP+GFIDR+LPHFP NSKTPAAKGFVANSFY+GLT
Sbjct: 788  GSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFVANSFYTGLT 847

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTA+TGYM+RRLMK LEDLS+ YD TVRNA+GGIVQF YG
Sbjct: 848  ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYG 907

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEG 649
            DDG+DPA+MEGKDG PLN D+LFMKV ATCP R    LSP++IKQ ++ + ++  T+ +G
Sbjct: 908  DDGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDIKQMLEDKLTQHKTSSDG 967

Query: 648  GCSAAFIESLSKFM-------------------GFAKGTFC--EKGAQNISGITSKQLQV 532
            GCS  F E L KF+                      K   C  E  A NISGI++KQLQV
Sbjct: 968  GCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIEEIIAANISGISAKQLQV 1027

Query: 531  FLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEI 352
            FLDTC SRY+SK IEAG  IGAIGA SI EPGTQMTLKTFHFAGVAS NVTLG PR+KEI
Sbjct: 1028 FLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI 1087

Query: 351  VLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLD 172
            +  +K IS P+IT  L    +  +A+IVKG +E+ VLG+VA +IKIV+     ++VV LD
Sbjct: 1088 INAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIKIVLKSSQPNLVVKLD 1147

Query: 171  LKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQ-VDRSKLHFEL 4
            ++ IEA  + I A++V+ +IL  P+IK K   ++V++  KL I P   D+SKL  EL
Sbjct: 1148 MQLIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRIYPAGTDKSKLQLEL 1204


>ref|XP_004306240.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit RPC1-like [Fragaria vesca subsp. vesca]
          Length = 1379

 Score =  493 bits (1269), Expect = e-137
 Identities = 260/418 (62%), Positives = 309/418 (73%), Gaps = 23/418 (5%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGS INISQM+ACVGQQSVGGRRAP+GFIDRSLPHFPRN+K PAA GFVANSFYSGLT
Sbjct: 758  GSKGSAINISQMVACVGQQSVGGRRAPDGFIDRSLPHFPRNAKMPAAIGFVANSFYSGLT 817

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
             TE FFHTMGGREGLVDTAVKTA+TGYM+RRL K LEDL++ YD TVR ANGGIVQFCYG
Sbjct: 818  PTEXFFHTMGGREGLVDTAVKTAETGYMSRRLSKILEDLAVHYDKTVRVANGGIVQFCYG 877

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPR-DPTFLSPEEIKQAMDKRFSERDTTPE 652
            DDG+DP  MEG  GAP++  R+F+K KATCP R   + LSPE++ + +  R SE+D  PE
Sbjct: 878  DDGMDPVMMEGNSGAPVDLYRMFLKAKATCPTRKTDSSLSPEQVYEVVRSRLSEQDMIPE 937

Query: 651  GGCSAAFIESLSKFMG---------------------FAKGTFCEKGAQNISGITSKQLQ 535
             G S  F  S+ KF+                        K    EK  ++ISG+TS+QL+
Sbjct: 938  DGLSMGFKSSIEKFLDEYVKTPSKTHENLMLNQSTGWEVKSETLEKIVKSISGVTSRQLE 997

Query: 534  VFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKE 355
            VFLDTCISRYHSKRI+AGT IGAIGA SI EP TQMTLKTFHFAGVAS NVTLG PR+KE
Sbjct: 998  VFLDTCISRYHSKRIDAGTAIGAIGAQSIGEPVTQMTLKTFHFAGVASMNVTLGVPRIKE 1057

Query: 354  IVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTL 175
            I+ G+KNI  P+ITA LECD+N   A++V GRI  T LGQVAKSI+I MTPR   +V+ L
Sbjct: 1058 IIDGTKNIKTPIITAVLECDNNAMIARMVAGRIGSTNLGQVAKSIEIRMTPRQACIVIKL 1117

Query: 174  DLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIPQ-VDRSKLHFEL 4
            D+  I   QL ID + VK +IL++ R+K  Q +I+V + + LE+  Q  DR +L+FEL
Sbjct: 1118 DMVMIRDVQLSIDVDVVKQSILKVLRVKLMQENIQVPDSETLEVFSQDKDRRRLYFEL 1175


>gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus guttatus]
          Length = 1109

 Score =  491 bits (1264), Expect = e-136
 Identities = 262/431 (60%), Positives = 310/431 (71%), Gaps = 36/431 (8%)
 Frame = -3

Query: 1188 GSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLT 1009
            GSKGSPINI+QM+ACVGQQSVGGRRAPNGF+DR+LPHF R +K P AKGFV NSFY+GL+
Sbjct: 485  GSKGSPINIAQMVACVGQQSVGGRRAPNGFVDRTLPHFEREAKDPDAKGFVQNSFYTGLS 544

Query: 1008 ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYG 829
            ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMK+LEDLS+ YDGTVRNA+  IVQF YG
Sbjct: 545  ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKALEDLSVHYDGTVRNASVCIVQFVYG 604

Query: 828  DDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIKQAMDK----RFSERDT 661
             D +DP QME K G PLNF+RLFMK KATCP  +   LS EEI + MD+    R SE   
Sbjct: 605  GDAMDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTMDEIIGDRLSESTG 664

Query: 660  TPEGGCSAAFIESLSKFMGFA--------------------------------KGTFCEK 577
            TPEG  S AF  S +K  G                                  KG + EK
Sbjct: 665  TPEGESSQAFSASSNKEGGMETFDNSLRKFIQKKYPNSDLMLKLNGKEHPDEDKG-YLEK 723

Query: 576  GAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGV 397
             A NI G+T +QL VFL+TCISRY  K+IE GT IGAIGAHSI EPGTQMTLKTFHFAGV
Sbjct: 724  IASNICGVTRQQLMVFLETCISRYSLKKIEGGTAIGAIGAHSIGEPGTQMTLKTFHFAGV 783

Query: 396  ASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIK 217
            AS NVTLG PR+KEI+  +K I+ P+IT  L+ D+NE  A+IVKGRIE+T+L QVAKSIK
Sbjct: 784  ASMNVTLGVPRIKEIINAAKKINTPIITTALQSDNNEIIAKIVKGRIEKTLLEQVAKSIK 843

Query: 216  IVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKKLEIIP 37
                 RS S+V+TLD+ +I+ + L +DA  VK++IL+  R+K K+  +KVL+ +KLEI+ 
Sbjct: 844  TSQASRSASIVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLKEQQVKVLDHRKLEIVM 903

Query: 36   QVDRSKLHFEL 4
              D+ KL FEL
Sbjct: 904  HADKKKLQFEL 914