BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00010006
         (2028 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22720.3| unnamed protein product [Vitis vinifera]              494   e-137
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   476   e-131
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr...   476   e-131
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s...   468   e-129
ref|XP_007038704.1| RNA polymerase III subunit RPC82 family prot...   460   e-126
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s...   448   e-123
gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Mor...   447   e-123
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s...   445   e-122
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              438   e-120
ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protei...   418   e-114
ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prun...   411   e-112
ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III s...   410   e-112
ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polyp...   410   e-111
ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phas...   407   e-111
ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III s...   403   e-109
ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III s...   402   e-109
ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III s...   402   e-109
ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III s...   399   e-108
ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citr...   399   e-108
ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III s...   392   e-106

>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  494 bits (1271), Expect = e-137
 Identities = 262/535 (48%), Positives = 365/535 (68%), Gaps = 20/535 (3%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M+T YG +LAVHLI+SHFG+LV+KVC+CL+R+G LT+  + + T L  + V K+C+LVLI
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQV-KSCILVLI 59

Query: 339  QHNCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQ 518
            QHNCVQAF+I+ +   G+  +V+T +M +F  ILHRMRF++FL IVSEE  +EC+ I+E 
Sbjct: 60   QHNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEG 119

Query: 519  LLKHGRLTLEQVKESQSPHKIEAQA--------NFVRLVNAHFVERCPAGEPSVVPPTKE 674
            LL+HGRLTLEQ+ +    ++ E +         +F++LV AHFVERCPA EP + PP++E
Sbjct: 120  LLQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEE 179

Query: 675  EANAGKKRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITDTETDANENSMDSHLRIPV 854
            E  A K+ +   K VE+P TIEQ       PM+A+RF VI +T TD +++       +  
Sbjct: 180  ETPARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVDDSP-----NVTA 234

Query: 855  GEKRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLSA 1034
            GEKRK D  E+D+++G S   K+VLWR NFE+FV  LRHKACIANV++RLD+ AA VLSA
Sbjct: 235  GEKRKQDALELDKETGAS-CEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSA 293

Query: 1035 ALETKKT---------SVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSE---KSGI 1178
             LE  ++         SV  +++TI+E VMK+E GR++T + VR SL  L      +   
Sbjct: 294  MLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAA 353

Query: 1179 DEYSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKLE 1358
            + YS+DL  II  AQN+E+ES+ LK+YG++AY+IFRLLS+   L ETDKISD  FV+K +
Sbjct: 354  ESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEKKD 413

Query: 1359 TPKILYKLWKDAYVHMERVATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLRLAH 1538
            T KILY+LWKD Y+ ME++     +  Q LLWKV KD +W H+L++MYH+ALNLSLR+A+
Sbjct: 414  TAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAY 473

Query: 1539 XXXXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
                         ++ REK  G + ++++R  +   LL SSL K+D+AIMLFNDF
Sbjct: 474  ELEQEQEII----QLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 524


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
            vinifera]
          Length = 511

 Score =  476 bits (1226), Expect = e-131
 Identities = 258/533 (48%), Positives = 359/533 (67%), Gaps = 18/533 (3%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M+T YG +LAVHLI+SHFG+LV+KVC+CL+R+G LT+  + + T L  + V K+C+LVLI
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQV-KSCILVLI 59

Query: 339  QHNCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQ 518
            QHNCVQAF+I+ +       +V+T +M +F  ILHRMRF++FL IVSEE  +EC+ I+E 
Sbjct: 60   QHNCVQAFAIQQEAP-----RVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEG 114

Query: 519  LLKHGRLTLEQVKESQSPHKIEA------QANFVRLVNAHFVERCPAGEPSVVPPTKEEA 680
            LL+HGRLTLEQ+ +    ++ E       + +F++LV AHFVERCPA EP + PP++EE 
Sbjct: 115  LLQHGRLTLEQILDRAKSNQREPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEET 174

Query: 681  NAGKKRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITDTETDANENSMDSHLRIPVGE 860
             A K+ +   K VE+P TIEQ       PM+A+RF VI +T TD +++            
Sbjct: 175  PARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVDDSP----------- 223

Query: 861  KRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLSAAL 1040
             RK D  E+D+++G S   K+VLWR NFE+FV  LRHKACIANV++RLD+ AA VLSA L
Sbjct: 224  NRKQDALELDKETGAS-CEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAML 282

Query: 1041 ETKKT---------SVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSE---KSGIDE 1184
            E  ++         SV  +++TI+E VMK+E GR++T + VR SL  L      +   + 
Sbjct: 283  EATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAAES 342

Query: 1185 YSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKLETP 1364
            YS+DL  II  AQN+E+ES+ LK+YG++AY+IFRLLS+   L ETDKISD  FV+K +T 
Sbjct: 343  YSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEKKDTA 402

Query: 1365 KILYKLWKDAYVHMERVATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLRLAHXX 1544
            KILY+LWKD Y+ ME++     +  Q LLWKV KD +W H+L++MYH+ALNLSLR+A+  
Sbjct: 403  KILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYEL 462

Query: 1545 XXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
                       ++ REK  G + ++++R  +   LL SSL K+D+AIMLFNDF
Sbjct: 463  EQEQEII----QLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 511


>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
            gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC3-like isoform X1 [Citrus
            sinensis] gi|557523806|gb|ESR35173.1| hypothetical
            protein CICLE_v10004721mg [Citrus clementina]
          Length = 527

 Score =  476 bits (1225), Expect = e-131
 Identities = 261/535 (48%), Positives = 349/535 (65%), Gaps = 20/535 (3%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M T YG K AVH+I +HFGDLV+KVCECL+R+GPLT Q + ++T L+ + V K  LLVLI
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQV-KNALLVLI 59

Query: 339  QHNCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQ 518
            Q NCVQAF+ E         K  T ++V+FD ILHR+RF++FL I+S+EF ++C  +V+ 
Sbjct: 60   QQNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQG 119

Query: 519  LLKHGRLTLEQV--------KESQSPHKIEAQANFVRLVNAHFVERCPAGEPSVVPPTKE 674
            LL+HGRLTL+Q+        KE         +   V+LV AH+VERCPA EP ++P ++E
Sbjct: 120  LLEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEE 179

Query: 675  EANAGKKRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITDTETDANENSMDSHLRIPV 854
            E  A KK S   K++ +P TIEQ       PMEA RF V+T+ E+D  E   +S+   P 
Sbjct: 180  EGPARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP- 238

Query: 855  GEKRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLSA 1034
            GEKRK DV E+DE   G    + V++R NFE F+ RLRHK CI +VR+ LD+ AA VLSA
Sbjct: 239  GEKRKHDVLELDEC--GVADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSA 296

Query: 1035 ALETK---------KTSVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSEK---SGI 1178
             L+           K SV  +L++IYEEV+K+E GR +T DHVRASL  L       +  
Sbjct: 297  MLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDASS 356

Query: 1179 DEYSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKLE 1358
            D YSID  KII  AQNEE+ES+V K+YG++AY+IFRLLS+   L ETDKISD  FV+K +
Sbjct: 357  DSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKKD 416

Query: 1359 TPKILYKLWKDAYVHMERVATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLRLAH 1538
             PKILYKLWKD Y+ ME++     +  Q LLWKVN+  +W+H+LD+M+HAALNLSLR+++
Sbjct: 417  APKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLRVSY 476

Query: 1539 XXXXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
                          +  +K TGP+ D+Y R  +   LL SS  K+D+AI+LF+DF
Sbjct: 477  ELDREKELL----NLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFHDF 527


>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X2 [Citrus sinensis]
          Length = 512

 Score =  468 bits (1203), Expect = e-129
 Identities = 258/532 (48%), Positives = 345/532 (64%), Gaps = 17/532 (3%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M T YG K AVH+I +HFGDLV+KVCECL+R+GPLT Q + ++T L+ + V K  LLVLI
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQV-KNALLVLI 59

Query: 339  QHNCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQ 518
            Q NCVQAF+ E         K  T ++V+FD ILHR+RF++FL I+S+EF ++C  +V+ 
Sbjct: 60   QQNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQG 119

Query: 519  LLKHGRLTLEQV--------KESQSPHKIEAQANFVRLVNAHFVERCPAGEPSVVPPTKE 674
            LL+HGRLTL+Q+        KE         +   V+LV AH+VERCPA EP ++P ++E
Sbjct: 120  LLEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEE 179

Query: 675  EANAGKKRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITDTETDANENSMDSHLRIPV 854
            E  A KK S   K++ +P TIEQ       PMEA RF V+T+ E+D  E   +S+   P 
Sbjct: 180  EGPARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP- 238

Query: 855  GEKRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLSA 1034
            GEKRK DV E+DE   G    + V++R NFE F+ RLRHK CI +VR+ LD+ AA VLSA
Sbjct: 239  GEKRKHDVLELDEC--GVADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSA 296

Query: 1035 ALETK---------KTSVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSEKSGIDEY 1187
             L+           K SV  +L++IYEEV+K+E GR +T DHVRASL  LD EK      
Sbjct: 297  MLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLDFEK------ 350

Query: 1188 SIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKLETPK 1367
                  II  AQNEE+ES+V K+YG++AY+IFRLLS+   L ETDKISD  FV+K + PK
Sbjct: 351  ------IIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKKDAPK 404

Query: 1368 ILYKLWKDAYVHMERVATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLRLAHXXX 1547
            ILYKLWKD Y+ ME++     +  Q LLWKVN+  +W+H+LD+M+HAALNLSLR+++   
Sbjct: 405  ILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLRVSYELD 464

Query: 1548 XXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
                       +  +K TGP+ D+Y R  +   LL SS  K+D+AI+LF+DF
Sbjct: 465  REKELL----NLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFHDF 512


>ref|XP_007038704.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
            [Theobroma cacao] gi|508775949|gb|EOY23205.1| RNA
            polymerase III subunit RPC82 family protein, putative
            isoform 1 [Theobroma cacao]
          Length = 523

 Score =  460 bits (1184), Expect = e-126
 Identities = 260/539 (48%), Positives = 345/539 (64%), Gaps = 24/539 (4%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M T +G K AV LI +HFGDLV+KVCECL+R+GPLT+Q I + T LT   V K  LLVLI
Sbjct: 1    MVTQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQV-KNSLLVLI 59

Query: 339  QHNCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQ 518
            QHNCVQAF +E  G+ G   K+ + ++ +F+ I+HR RF +FL IVS++  ++C  ++E 
Sbjct: 60   QHNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEA 119

Query: 519  LLKHGRLTLEQVKESQSPHKIEA--------QANFVRLVNAHFVERCPAGEPSVVPPTKE 674
            LL HGRLTL+Q+ +     + E         +  F++L+NAHFVERCPA EP +  PT+E
Sbjct: 120  LLLHGRLTLKQMSDRAKSAQNEGDDVILDAVREAFIKLLNAHFVERCPAAEPVLTKPTEE 179

Query: 675  EANAGKKRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITDTETDAN----ENSMDSHL 842
            E +A K+     K +E   T+EQ       P EA RF ++T TE  A+    EN+  S  
Sbjct: 180  ETSARKRVPKSAKILEGKETLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNSSS-- 237

Query: 843  RIPVGEKRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAAT 1022
             + VG+KRKLD  E  E  G +   + VLWR NFE+F+ RLRHKA I NVR+ LD+ A  
Sbjct: 238  -MTVGKKRKLDALE-SETEGEATDEQVVLWRANFEEFIRRLRHKAFIENVRACLDDGAVI 295

Query: 1023 VLSAALETKKT---------SVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSE--- 1166
            V+SA LE  +T         SV  +LN+IYEEV+K+E GR +TFD VRASL  L      
Sbjct: 296  VISAMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSCPPFV 355

Query: 1167 KSGIDEYSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFV 1346
            K+  + YSID  KII  AQN+E+ES+VLK+YG++AY++FRLLS    L ETDKI+D AFV
Sbjct: 356  KAVNESYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDKIADTAFV 415

Query: 1347 DKLETPKILYKLWKDAYVHMERVATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSL 1526
            +K +T KILYKLWKD Y+HME++     +  Q LLWKVNK+ +WEH+LD+M+HAALNLSL
Sbjct: 416  EKKDTTKILYKLWKDDYLHMEKLQLTGARQSQFLLWKVNKNTLWEHVLDEMFHAALNLSL 475

Query: 1527 RLAHXXXXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
            R+AH                +E    P   +  R  +   LL SS  K+D+AIMLF+DF
Sbjct: 476  RVAHEL-----------EQEKELLNLPQDKRVNRLRKVRLLLESSQMKLDDAIMLFHDF 523


>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            tuberosum]
          Length = 525

 Score =  448 bits (1152), Expect = e-123
 Identities = 254/535 (47%), Positives = 344/535 (64%), Gaps = 20/535 (3%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M +P+G KLAV+LI+S+FGDL +KVC+CL+RRG  T+ Q+   T LT  NV K CLLVLI
Sbjct: 1    MVSPHGIKLAVYLISSYFGDLNAKVCDCLLRRGTQTLYQVVSSTELTRTNV-KNCLLVLI 59

Query: 339  QHNCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQ 518
             HNCVQAF+++  G  G+  KV+T +M +FD I+H++RF +F+ IVSEE G+EC+ I E 
Sbjct: 60   HHNCVQAFALQQPGGFGEEPKVITQYMALFDNIIHKLRFPKFIEIVSEEMGKECEEIFEG 119

Query: 519  LLKHGRLTL----EQVKESQSPHKIEAQA---NFVRLVNAHFVERCPAGEPSVVPPTKEE 677
            LL+HGRLTL    E+ KE+       A A   +F  LVNA FVERCPA +P + PP  EE
Sbjct: 120  LLQHGRLTLTEIIERYKEASKQGDSSADAARDSFNSLVNARFVERCPAPDPLLEPPAAEE 179

Query: 678  ANAGKKRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITDTETDANENSMDSHLRIPVG 857
              A KKR  K  +++   T+EQ       PME+ RF V  D   D+ E +      +  G
Sbjct: 180  T-AAKKRGAKSAKIQAQ-TMEQQALAAAAPMESMRFLV-EDIWNDSVERADKRTTDVKCG 236

Query: 858  EKRKL-DVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLSA 1034
             KRK  D+    +DS   K  KEVLWR NFE+F+ RLRHKAC+ANV+ R++ +AA VL+A
Sbjct: 237  MKRKQGDLESNTKDSATGK--KEVLWRANFEEFIRRLRHKACVANVKVRVNNDAAVVLAA 294

Query: 1035 ALETKK---------TSVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSEKS--GID 1181
             LE  +          SV  ++N IY+EV+K E G  +  + +RASL  L  E     ID
Sbjct: 295  TLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGCEAPLMEID 354

Query: 1182 E-YSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKLE 1358
            E YS+DL  II QA+ EE+ES+VLK+YG+EAY++FRLLS+   L ETDKISD  FV+K +
Sbjct: 355  ETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKISDTTFVEKKD 414

Query: 1359 TPKILYKLWKDAYVHMERVATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLRLAH 1538
              KIL+KLWKD Y+ M++V     K  + +LWK+NK ++WEHILD+MYHAALNL LR+ H
Sbjct: 415  AVKILFKLWKDDYLEMKKVIARAAKQSEFILWKINKQSLWEHILDEMYHAALNLRLRITH 474

Query: 1539 XXXXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
                         +M ++K  G + +KY R  +   +L SSL  +D+++MLF+DF
Sbjct: 475  EKEQEKEIL----QMPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSLMLFHDF 525


>gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
          Length = 564

 Score =  447 bits (1151), Expect = e-123
 Identities = 266/573 (46%), Positives = 350/573 (61%), Gaps = 58/573 (10%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M+TPYG K AVHLI SHFG+LV+ VCE L+R+GPLT+QQ+ + T LT    IK  LL+LI
Sbjct: 1    MATPYGIKFAVHLITSHFGNLVANVCENLLRKGPLTLQQLIRFTELTPLQ-IKNSLLILI 59

Query: 339  QHNCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQ 518
            QHNCVQ FS E  G  G  VKV T ++V+FD ILHR+RF +FL IVSEE  + C  I+E 
Sbjct: 60   QHNCVQPFSSEQIGAGGNEVKV-TQYLVLFDNILHRLRFPKFLEIVSEELDKNCGEILEG 118

Query: 519  LLKHGRLTLEQVKESQSPHKIE--AQANFVRLVNAHFVERCPAGEPSVVPPTKEEANAGK 692
            LL+HGRLTLEQ+ E    + ++   + +F +L+N+ FVERCPA EP V P T + +N   
Sbjct: 119  LLQHGRLTLEQIYERARDNAVQDAVRESFQKLLNSRFVERCPAPEPFVEPSTIKSSNKRG 178

Query: 693  KRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITD--TETDANENSMDSHLRIPVGEKR 866
             +S KL  V +  T EQ        ++  RF ++T   TE D ++   DS   + VGEKR
Sbjct: 179  AKSAKLDEVSE--TEEQRVLAAAASLDTLRFSILTPSGTEFDEDKKDGDSSSSMGVGEKR 236

Query: 867  KLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLSAALET 1046
            K   ++ D D+ GS  N+ +LWR NFE+F   LRHKACI NVR+RLD  AATVL A L+ 
Sbjct: 237  KHGAADSD-DAFGSNENEVILWRANFEEFTRYLRHKACIENVRARLDVGAATVLKAMLDA 295

Query: 1047 KKT---------SVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSEKSGIDE-YSID 1196
             ++         SV+ +++TI+EEVMK+E GR+LT D VRASL  L    SG D+ YSID
Sbjct: 296  TRSAEKKVKTENSVSLSMDTIFEEVMKSEAGRSLTLDRVRASLVQLGCSSSGTDDTYSID 355

Query: 1197 LNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKLETPKILY 1376
            L +II  AQ EE+ES+VL++YG++AY++FRLLS+   L ETDKI+D+ FV+K E PKIL 
Sbjct: 356  LKQIIELAQKEEVESIVLRRYGRDAYRMFRLLSKAGLLQETDKIADMTFVEKKEAPKILG 415

Query: 1377 KLWKDAYVHME-------------------------RVATATFKSQQLL----------- 1448
            KLWKD Y+HME                         R+  +      L+           
Sbjct: 416  KLWKDEYLHMEVEYFNLLIKFTLSSNMAICDVVDKPRLTLSGMSDLVLMDQNKEIVNKFV 475

Query: 1449 --------LWKVNKDAVWEHILDDMYHAALNLSLRLAHXXXXXXXXXXXXQRMGREKFTG 1604
                    LWKVNK  +W+H+LD+MYHAALNLSLR+ H              +  EK TG
Sbjct: 476  VDRNTTFYLWKVNKPILWQHVLDEMYHAALNLSLRVIHELDQKKELL----TIPPEKRTG 531

Query: 1605 PIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
            P+  ++KR     F L SSL K+D+A+MLF  F
Sbjct: 532  PLEKEFKRLKNAKFFLESSLMKLDDALMLFRHF 564


>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            lycopersicum]
          Length = 525

 Score =  445 bits (1145), Expect = e-122
 Identities = 250/534 (46%), Positives = 346/534 (64%), Gaps = 19/534 (3%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M +P+G KLAV+LI+S+FG+L +KVC+CL+RRG  T+ Q+   T L+ KNV K CLLVLI
Sbjct: 1    MVSPHGIKLAVYLISSYFGELNAKVCDCLLRRGTQTLHQVVSSTELSRKNV-KNCLLVLI 59

Query: 339  QHNCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQ 518
             HNCVQAF+I   G  G+  K++T +M +FD I+H++RF +F+ IVSEE G+EC+ I+E 
Sbjct: 60   HHNCVQAFAIRQPGGFGEEAKIITQYMALFDNIIHKLRFPKFIEIVSEELGKECEEILEW 119

Query: 519  LLKHGRLTLEQ--VKESQSPHKIE-----AQANFVRLVNAHFVERCPAGEPSVVPPTKEE 677
            LL+HGRL+L Q  VK  Q+  + +     AQ +F RLVNA FVERCPA +P + PP +EE
Sbjct: 120  LLQHGRLSLSQIIVKYKQASKQGDSSADAAQDSFNRLVNARFVERCPAPDPLLEPPAEEE 179

Query: 678  ANAGKKRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITDTETDANENSMDSHLRIPVG 857
              A KKR  K  +++   T+EQ       PME+ RF V  +   D+ E +      +  G
Sbjct: 180  T-AAKKRGAKSAKIQAQ-TMEQQALAAAAPMESMRFLV-ENIWNDSVEKADKRTTDVKCG 236

Query: 858  EKRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLSAA 1037
             KRK +  E +     +   KEVLWR NFE+F+ RLRHKAC+ANV+ R++ +AA VL+A 
Sbjct: 237  MKRKQEDLESNTKDPAT-GEKEVLWRANFEEFIRRLRHKACVANVKVRVNNDAAIVLAAT 295

Query: 1038 LETKK---------TSVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSEKS--GIDE 1184
            LE  +          SV  ++N IY+EV+K E G  +  + +RASL  L  E     IDE
Sbjct: 296  LELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGCEAPLMEIDE 355

Query: 1185 -YSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKLET 1361
             YS+DL  II QA+ EE+ES+VLK+YG+EAY++FRLLS+   L ETDKISD  FV+K + 
Sbjct: 356  TYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKISDTTFVEKKDA 415

Query: 1362 PKILYKLWKDAYVHMERVATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLRLAHX 1541
             KIL+KLWKD Y+ M++V     K  + +LWK+NK ++WEHILD+MYHAALNL LR  H 
Sbjct: 416  VKILFKLWKDDYLEMKKVIARAPKQSEFILWKINKQSLWEHILDEMYHAALNLRLRTTHE 475

Query: 1542 XXXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
                        +M ++K  G + +KY R  +   +L SSL  +D+++MLF+DF
Sbjct: 476  KEQEKEIL----QMPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSLMLFHDF 525


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  438 bits (1126), Expect = e-120
 Identities = 243/536 (45%), Positives = 342/536 (63%), Gaps = 21/536 (3%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M+  YG KLAVHLI++ FGD  +KVC+CL+R+G L +  I +   L+ + V KT L VLI
Sbjct: 1    MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQV-KTYLKVLI 59

Query: 339  QHNCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQ 518
            QHNCVQAF++EH+G  G+   V+T +M++FD ILHRMRF + L IVS+E  +EC+ + E 
Sbjct: 60   QHNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEA 119

Query: 519  LLKHGRLTLEQVKESQSPHKIEA--------QANFVRLVNAHFVERCPAGEPSVVPPTKE 674
             LKHG LTL+Q+ +    ++ E         + +F +LVNAH+VERCPA +P +VPP +E
Sbjct: 120  FLKHGWLTLQQILDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFLVPPDEE 179

Query: 675  EANAGKKRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITDTETDAN-ENSMDSHLRIP 851
            +  A K  +   K VE+    EQ       P +A+ F VITDT  D N + S+ +   + 
Sbjct: 180  KTPARKHDANSAKAVEELEIGEQCDIAKATPSKAKGFPVITDTCGDINGDKSIGNPPGVV 239

Query: 852  VGEKRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLS 1031
            +G+KRK D  ++D +SG + S K+V WR N+++ V  LRHKACI NVR+RLD  AA VLS
Sbjct: 240  IGKKRKQDALKLDTESGAA-SEKDVPWRANYKELVCHLRHKACIENVRARLDSGAAIVLS 298

Query: 1032 AALETKKT---------SVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSEKSGIDE 1184
            A LE  ++         SV  +++TI E VM++E G ++T + +RASL  L    +G+  
Sbjct: 299  AMLEATQSAEKNVKEEISVLLSISTITEAVMQSEAGCSMTLERIRASLVQLGCHPNGVGA 358

Query: 1185 ---YSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKL 1355
               Y+IDL KII  AQN+E+ES+VLK+YG+EA++IFRLLS+  C  ET KISD  F++K 
Sbjct: 359  DRTYNIDLKKIIELAQNDEVESMVLKRYGREAHRIFRLLSKSCCPLETTKISDTTFIEKK 418

Query: 1356 ETPKILYKLWKDAYVHMERVATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLRLA 1535
            E  KILYKLWKD  +HME++     +  Q +LWKV KD  W HILD+MYHAALNLS+++ 
Sbjct: 419  EAAKILYKLWKDECLHMEKIVLNESRQSQFMLWKVKKDTFWRHILDEMYHAALNLSIQII 478

Query: 1536 HXXXXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
                           + R+K  G + +   R +    LL +SL K+D+A+MLF+DF
Sbjct: 479  --------------ELRRDKHVGALRE---RDVRLAILLQASLMKLDDALMLFHDF 517


>ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protein [Populus trichocarpa]
            gi|550322612|gb|EEF06047.2| RNA polymerase 3 subunit
            RPC82 family protein [Populus trichocarpa]
          Length = 520

 Score =  418 bits (1074), Expect = e-114
 Identities = 237/534 (44%), Positives = 342/534 (64%), Gaps = 19/534 (3%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M + YG K AVH+I +HFG LV+KVC+CL+++GPL +++I ++T L+ + +++ CLLVLI
Sbjct: 1    MVSQYGIKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELS-ETLVRNCLLVLI 59

Query: 339  QHNCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQ 518
            QHNC+Q F +E +G  G+V KV + +MV+FD +LHR+RFS+F+ IVS+EF + C  ++E 
Sbjct: 60   QHNCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIET 119

Query: 519  LLKHGRLTLEQV----KESQSPHKIEA-QANFVRLVNAHFVERCPAGEPSVVPPTKEEAN 683
            LL+HGRL+ EQ+    ++  S   +EA Q N  +LV A +VERCP  EP +  P++EEA 
Sbjct: 120  LLQHGRLSSEQIFDGFRDRSSSGGMEALQENMHKLVMARYVERCPISEPFLALPSEEEAA 179

Query: 684  AGKKRSTK-LKRVEKPVTIEQLXXXXXXPMEAERFFVITDTETDANENSMDSHLRIPVGE 860
              ++R  K  K   +P T+EQ       P E  RF    + E  A+ + ++++    +G+
Sbjct: 180  PVRRRGAKSAKAFLEPETLEQRVLVAAVPPEGMRFSFELNPEIGADRDKVENNSSSNIGD 239

Query: 861  KRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLSAAL 1040
            KRKLD  E D D GG    +  LWRVNFE+F+ RLRHK CI  VR+RLD+EAATV +A L
Sbjct: 240  KRKLDALESDID-GGVADKQVALWRVNFEEFIRRLRHKICIETVRTRLDDEAATVFTAML 298

Query: 1041 ETKK---------TSVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSEKSGI----D 1181
            +  +         +SV  + N+IY EV+K+E+GR +T D+V + L  L S    +    +
Sbjct: 299  DASRSEEKKIKTASSVPLSENSIYAEVIKSEKGRNMTLDYVISVLVGLSSSPPFVRVVDN 358

Query: 1182 EYSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKLET 1361
             YSID    I  AQ +  ES+V KKYGK+AY++FRLLS+  CL ETDKISD  F++K ET
Sbjct: 359  SYSIDFKHTIEVAQTD--ESIVYKKYGKDAYRMFRLLSKAGCLLETDKISDSIFLEKKET 416

Query: 1362 PKILYKLWKDAYVHMERVATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLRLAHX 1541
              IL K+W+  Y+ ME++        Q LLWKVN   + E +LDDM+HAALNLSLR+A+ 
Sbjct: 417  ANILSKMWQGDYLQMEKLIAG---PTQFLLWKVNMINLRERVLDDMFHAALNLSLRVAYE 473

Query: 1542 XXXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
                         +G +   GP+ +KY++  +  FLL SS  K+D+AIM+F+DF
Sbjct: 474  LEQQKEIL----HLGVD---GPMKEKYEKLKKVRFLLESSRMKLDDAIMIFHDF 520


>ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prunus persica]
            gi|462415465|gb|EMJ20202.1| hypothetical protein
            PRUPE_ppa004195mg [Prunus persica]
          Length = 524

 Score =  411 bits (1056), Expect = e-112
 Identities = 241/538 (44%), Positives = 337/538 (62%), Gaps = 25/538 (4%)
 Frame = +3

Query: 165  TPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLIQH 344
            T YG K AVH+I S+FG+LV+KVCE L+RRG L+++Q+   T LT + V K  LL+LIQH
Sbjct: 4    TQYGIKYAVHIITSNFGNLVAKVCEILLRRGHLSLKQLIGFTELTPQQV-KNSLLILIQH 62

Query: 345  NCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQLL 524
            NCVQ FS +           +T ++ +FD I+HR RF++FL +VS+E   + + I++ LL
Sbjct: 63   NCVQPFSFDQSEG-----PKVTQYIALFDNIIHRGRFAKFLAVVSQELDTDRELILKDLL 117

Query: 525  KHGRLTLEQVKES--------QSPHKIEAQANFVRLVNAHFVERCPAGEPSVVPPTKEEA 680
            ++GRLTL+Q+ E          S  K   Q +F++LVNAHFVERCPA EP +   TK+E 
Sbjct: 118  ENGRLTLKQIIEGAESSKSQGDSADKDSVQESFLKLVNAHFVERCPAPEPVLGQATKQEG 177

Query: 681  NAGKKRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITDTETDANENSMDSHLRIPVGE 860
             A K+ +   K VE P TIEQ       P EA RF ++ D+E DA     D+   + VGE
Sbjct: 178  PAKKRGAKSAKMVEVPETIEQRVIAAAAPPEAIRFSIMIDSEADAPGGKSDN---MSVGE 234

Query: 861  KRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLSAAL 1040
            K  + +      S     ++ VLWR NFE+F+  LRHKAC+ NVR+RLD+EAA VL A L
Sbjct: 235  KVGIGIVI----SIYQGYDEVVLWRANFEEFIRCLRHKACVENVRARLDDEAAVVLRAML 290

Query: 1041 ETKKT---------SVTFTLNTIYEEVMKTERGRTLTFDHVRASLAML--DSEKSGIDE- 1184
            +  +T         SV  +LNTIYEEV+ +E GR+LT   VR SL+ L   S++  +DE 
Sbjct: 291  KATRTAEKKVKTENSVPLSLNTIYEEVINSEAGRSLTMGRVRDSLSGLCDSSQERDVDED 350

Query: 1185 --YSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISD---IAFVD 1349
              YS DL KI+  AQ++E+E +VLK+YGK+AY +FR+LS      ETDKISD   ++ V+
Sbjct: 351  ESYSADLKKILELAQDDEVELIVLKRYGKDAYTMFRILSLAGRPIETDKISDMSQLSLVE 410

Query: 1350 KLETPKILYKLWKDAYVHMERVATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLR 1529
            K ETPKILY LWKD Y+HMER+     +  Q L+W+V+K  +W+H+LD+M+H ALNLSLR
Sbjct: 411  KNETPKILYNLWKDDYLHMERLVVTGARQSQFLVWRVDKPIIWKHVLDEMFHTALNLSLR 470

Query: 1530 LAHXXXXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
            LA               +   K  G +A +++ +   + +L +SL K+D+A+MLF+DF
Sbjct: 471  LA----CEEERFKEITDLPAHKLLGEMAKQWQLYRNVILVLQASLLKLDDALMLFHDF 524


>ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
            [Fragaria vesca subsp. vesca]
          Length = 534

 Score =  410 bits (1055), Expect = e-112
 Identities = 241/548 (43%), Positives = 332/548 (60%), Gaps = 35/548 (6%)
 Frame = +3

Query: 165  TPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLIQH 344
            T  G + AV +I  HFG+LV+KVCE L++ GPL +  + + T LT + V K  LL+L+QH
Sbjct: 4    TNSGIQYAVQIITKHFGNLVAKVCETLLKSGPLNLGALIRSTALTPQQV-KNSLLILVQH 62

Query: 345  NCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQLL 524
            NCVQ F+ E +  +         ++ V+D ILHR+RF++FL +V++E G+EC+ +V  LL
Sbjct: 63   NCVQPFTQESKAGLK------VQYIAVYDNILHRLRFAKFLAVVAQELGDECKQLVAGLL 116

Query: 525  KHGRLTLEQV------KESQSPHKIE----AQANFVRLVNAHFVERCPAGEPSVVPPTKE 674
            +HGRLT +Q+      K      +++    AQ NFVRLVNA FVERCPA EP +  P ++
Sbjct: 117  EHGRLTQQQLMDRADQKSKSDSTEVQDVSAAQENFVRLVNARFVERCPAPEPLLEEPPEQ 176

Query: 675  EANAGKKRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITDTETD----ANENSMDSHL 842
            E    K R    K V+ P TIEQ       PMEA RF + T++ETD     +EN+  S  
Sbjct: 177  EGPK-KPRGKSAKMVQVPETIEQRVLAAARPMEAIRFLITTESETDDPLQKSENNFSS-- 233

Query: 843  RIPVGEKRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAAT 1022
             + VGEKRK D  ++D +  GS     +LWR NFE+F+  LRHKACI +VR+R D+ AA 
Sbjct: 234  -MGVGEKRKFD--DLDSEEHGSNDKGVILWRANFEQFIRCLRHKACIESVRARHDDGAAV 290

Query: 1023 VLSAALETKKTSVT---------FTLNTIYEEVMKTERGRTLTFDHVRASLAML------ 1157
            VL A L+  +   T           ++ IYEEVM +E   +L  + VRA L +L      
Sbjct: 291  VLRAVLKATRNQETKVKTDYSGPLKMDAIYEEVMDSEACPSLEQECVRAHLRLLCGAPLV 350

Query: 1158 --DSEKSGIDE-YSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQC---LYET 1319
              + E    D  YS+DL KII   QN+E+ES+VLK+YGK+AY+IFRLL+ +      +ET
Sbjct: 351  TGEYEDENEDVLYSVDLKKIIELLQNDEVESIVLKRYGKDAYRIFRLLTSQSNAGRFFET 410

Query: 1320 DKISDIAFVDKLETPKILYKLWKDAYVHMERVATATFKSQQLLLWKVNKDAVWEHILDDM 1499
            DKIS++A VDK ETPKILYKLWKD YVHME+++    K  Q+++WKV+K  VWEH+LD+M
Sbjct: 411  DKISEMALVDKKETPKILYKLWKDDYVHMEKLSLTAAKQSQVMVWKVHKSIVWEHVLDEM 470

Query: 1500 YHAALNLSLRLAHXXXXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDN 1679
            YHAA NL  R  H                +EK  G +  K  R +    ++ SSL K+D+
Sbjct: 471  YHAAYNLVKRYDH----EREENKEVTNTPKEKRIGELEKKANRFLAVRKIMASSLLKLDD 526

Query: 1680 AIMLFNDF 1703
            A+MLF+DF
Sbjct: 527  ALMLFHDF 534


>ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polypeptide, putative [Ricinus
            communis] gi|223549895|gb|EEF51382.1| DNA-directed RNA
            polymerase III 62 kDa polypeptide, putative [Ricinus
            communis]
          Length = 485

 Score =  410 bits (1053), Expect = e-111
 Identities = 229/478 (47%), Positives = 315/478 (65%), Gaps = 20/478 (4%)
 Frame = +3

Query: 165  TPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLIQH 344
            T +G K A H+I +HFG+LV+KVC+CL+R+GPLT+Q++ + T L    V K  LLVLIQH
Sbjct: 4    TQHGIKYATHIITNHFGNLVAKVCQCLLRKGPLTVQKVVEFTELNQTQV-KNSLLVLIQH 62

Query: 345  NCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQLL 524
            NCVQA+        G  +K+ TH++ +FD ILHR+RFS+FL I+S++F + C  IVE LL
Sbjct: 63   NCVQAY------RSGDDLKLTTHYIALFDNILHRVRFSKFLAIISQDFHKSCVDIVEGLL 116

Query: 525  KHGRLTLEQVKE-SQSPHKI---EAQANFVRLVNAHFVERCPAGEPSVVPPTKEEANAGK 692
            +HGRLT++Q+ + + S + I     + N  +LVN  ++E CPA EP + PPT+EE  A K
Sbjct: 117  EHGRLTVKQIVDRANSRNSIGLDSVKENLCKLVNGRYIEHCPASEPVLAPPTEEEDRAKK 176

Query: 693  KRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITDTET-DANENSMDSHLRIPVGEKRK 869
            + +   K V +  T+EQ       PM+A+RF V  DTE  D  EN  +      VG+K  
Sbjct: 177  RSAKSAKIVIESETLEQRVLAVAVPMDAKRFSVDLDTELKDDAENDQNKSSDKHVGDK-- 234

Query: 870  LDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLSAALETK 1049
              V+E          ++ VLWR NFE+F+ RLRHKACI NVR RLD+ AA VLSA L+  
Sbjct: 235  --VAE----------DQVVLWRANFEEFIRRLRHKACIENVRGRLDDGAAIVLSAMLDAS 282

Query: 1050 KT---------SVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSE----KSGIDEYS 1190
            +T         SV  +LN+IYEEV+K E GR +T DH+ ++L  L S     K+  D Y+
Sbjct: 283  RTEEKKVKTASSVPLSLNSIYEEVIKNENGRNMTIDHIESALGQLGSPPPFVKAVEDLYT 342

Query: 1191 IDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKLETPKI 1370
            ID   II  AQ++E+ES+VLK+YG++AY+IFRLLS+   L ETDKISD  FV+K ET KI
Sbjct: 343  IDFKHIIEAAQSDEVESIVLKRYGRDAYRIFRLLSKASRLLETDKISDTIFVEKKETTKI 402

Query: 1371 LYKLWKDAYVHMERV--ATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLRLAH 1538
            LYK+W+D Y+ ME++   TATF     LLWKVNK  +W+ +LD+M+HA+LNLS+R+A+
Sbjct: 403  LYKMWQDDYLLMEKLVAGTATF-----LLWKVNKHTLWKQVLDEMFHASLNLSIRVAY 455


>ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phaseolus vulgaris]
            gi|561016615|gb|ESW15419.1| hypothetical protein
            PHAVU_007G071300g [Phaseolus vulgaris]
          Length = 517

 Score =  407 bits (1047), Expect = e-111
 Identities = 238/536 (44%), Positives = 325/536 (60%), Gaps = 21/536 (3%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M T +G K AVHLI +HFG+LV+KVCE L   G LT+ Q+ +++ LT K+ +K  LLVL+
Sbjct: 1    MVTQFGIKFAVHLITNHFGNLVAKVCENLFSHGSLTLDQLVRYSELT-KDQVKNSLLVLV 59

Query: 339  QHNCVQAF--SIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIV 512
            QHNC QAF  + E   +    ++V T ++V+FD I+HR+RF +FL  VS +  EEC  ++
Sbjct: 60   QHNCCQAFISAPEDDDDDADRLRVRTQYLVLFDNIIHRLRFPKFLETVSRKLDEECVELL 119

Query: 513  EQLLKHGRLTLEQVKESQSPHKIEAQANFV------RLVNAHFVERCPAGEPSVVPPTKE 674
            + LL+ GRLTL+Q+ +  S  K  A    V      +L+ A  VERCPA EP VV  + +
Sbjct: 120  DGLLRDGRLTLKQMVDRASQGKENAVDTKVVREILSKLLTARLVERCPAPEP-VVSTSFK 178

Query: 675  EANAGKKRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITD--TETDANENSMDSHLRI 848
            E    K+ +   K  E P T+EQ       P  A RF    D  +  D   NS D  +  
Sbjct: 179  ETTTRKRGAKSAKIFEAPETLEQRVLEAAVPGNAIRFSFTADMRSNVDGETNSDDDQIT- 237

Query: 849  PVGEKRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVL 1028
                     V + D         +E+LWR NFE+F+  +RHKA I N+R++ D+  ATVL
Sbjct: 238  --------SVEQNDA------KEEEILWRANFEEFIRHIRHKALIENIRTQHDDGTATVL 283

Query: 1029 SAALETKKT---------SVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSEKSGI- 1178
            SA LE  KT         SV  +L+TI  EVMKT+ GRT+T D +RASL+ L   +  I 
Sbjct: 284  SAVLEATKTVEKKVKMENSVPLSLDTITAEVMKTDTGRTMTIDRIRASLSQLGCSQRMIV 343

Query: 1179 -DEYSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKL 1355
             D YSIDL KII +AQNEE+ES+VLK+YG++AY++FRLLS+  C ++TD+I+    V+K 
Sbjct: 344  DDAYSIDLKKIIERAQNEEVESIVLKRYGRDAYRMFRLLSKDCCFHDTDQIAASTLVEKK 403

Query: 1356 ETPKILYKLWKDAYVHMERVATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLRLA 1535
            E PK+LY+LWKD Y++ME+V     K   +L+WKVNK  VWEH+LD+MYHAALNLSLR+A
Sbjct: 404  EAPKLLYRLWKDNYLYMEKVIATGVKQTTILMWKVNKPLVWEHVLDEMYHAALNLSLRMA 463

Query: 1536 HXXXXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
                         +   + K  GP+  KYKR +    LL SSL K+D A+MLF+DF
Sbjct: 464  FEQEKDEELLNVPK--DKLKEPGPLQKKYKRLLNVWLLLGSSLMKLDEALMLFHDF 517


>ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
            sativus]
          Length = 518

 Score =  403 bits (1036), Expect = e-109
 Identities = 238/535 (44%), Positives = 334/535 (62%), Gaps = 22/535 (4%)
 Frame = +3

Query: 165  TPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLIQH 344
            T YG K AVH++ +HFG+LV+KVCE L+R+GPLT++ + + T LT   V    LL+LIQH
Sbjct: 4    TQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQV-NNSLLILIQH 62

Query: 345  NCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEE--CQGIVEQ 518
            NCVQAF+     + G   K  T ++ +F  ILHRMRFS+F+ I S++ G++  CQ ++E 
Sbjct: 63   NCVQAFT-----DFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEG 117

Query: 519  LLKHGRLTLEQVKESQSP--HKIE--AQANFVRLVNAHFVERCPAGEPSVVPPTKEEANA 686
            LL++GRL++EQ+ E      H I      +  +L+NAHFVERCPA EP++ P  K E   
Sbjct: 118  LLQNGRLSMEQLVERAESRNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSP--KVEEPP 175

Query: 687  GKKRSTKLKRV-EKPVTIEQLXXXXXXPMEAERFFVITDTETDANENSMDSHLRIPVGEK 863
             +KR  K  ++ E P T+EQ       P+E  RF +  DT  +A ++   S +    G+K
Sbjct: 176  PRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSM-GDTNPEAEKSEHHSQIS---GQK 231

Query: 864  RKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLSAALE 1043
            RK D  E+ +DSG +     +LWR N+++F+  LRHKACI +VRS+ D+    VLSA LE
Sbjct: 232  RKHDDLEIAQDSGDADG--PILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILE 289

Query: 1044 TKKTS---------VTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSEKSGIDEYSI- 1193
              ++S         V  +L+ IYEEVMK E GR++T D V ASLA L     GID+Y I 
Sbjct: 290  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCP--GIDDYKIS 347

Query: 1194 -----DLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKLE 1358
                 D + II QAQ +E+ES+VLK+YG++AY++FR LS+   L ET+KISD +FVDK E
Sbjct: 348  MFTTVDFSMIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNE 407

Query: 1359 TPKILYKLWKDAYVHMERVATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLRLAH 1538
             PKILY+LWKD Y++ME+VA    +    LLW+V++  +WEH+LD+MYHA+LNL LRLAH
Sbjct: 408  APKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAH 467

Query: 1539 XXXXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
                          + ++    P+  K         LL SSL K+D+A+MLF+DF
Sbjct: 468  EIEENKELL----SLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDALMLFHDF 518


>ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
            sativus]
          Length = 518

 Score =  402 bits (1033), Expect = e-109
 Identities = 237/535 (44%), Positives = 334/535 (62%), Gaps = 22/535 (4%)
 Frame = +3

Query: 165  TPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLIQH 344
            T YG K AVH++ +HFG+LV+KVCE L+R+GPLT++ + + T LT   V    LL+LIQH
Sbjct: 4    TQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQV-NNSLLILIQH 62

Query: 345  NCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEE--CQGIVEQ 518
            NCVQAF+     + G   K  T ++ +F  ILHRMRFS+F+ I S++ G++  CQ ++E 
Sbjct: 63   NCVQAFT-----DFGDAPKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEG 117

Query: 519  LLKHGRLTLEQVKESQSP--HKIE--AQANFVRLVNAHFVERCPAGEPSVVPPTKEEANA 686
            LL++GRL++EQ+ E      H I      +  +L+NAHFVERCPA EP++ P  K E   
Sbjct: 118  LLQNGRLSMEQLVERAESRNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSP--KVEEPP 175

Query: 687  GKKRSTKLKRV-EKPVTIEQLXXXXXXPMEAERFFVITDTETDANENSMDSHLRIPVGEK 863
             +KR  K  ++ E P T+EQ       P+E  RF +  DT  +A ++   S +    G+K
Sbjct: 176  PRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSM-GDTNPEAEKSEHHSQIS---GQK 231

Query: 864  RKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLSAALE 1043
            RK D  E+ +DSG +     +LWR N+++F+  LRHKACI +VRS+ D+    VLSA LE
Sbjct: 232  RKHDDLEIAQDSGDADG--PILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILE 289

Query: 1044 TKKTS---------VTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSEKSGIDEYSI- 1193
              ++S         V  +L+ IYEEVMK E GR++T D V ASLA L     G+D+Y I 
Sbjct: 290  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCP--GMDDYKIS 347

Query: 1194 -----DLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKLE 1358
                 D + II QAQ +E+ES+VLK+YG++AY++FR LS+   L ET+KISD +FVDK E
Sbjct: 348  MFTTVDFSMIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNE 407

Query: 1359 TPKILYKLWKDAYVHMERVATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLRLAH 1538
             PKILY+LWKD Y++ME+VA    +    LLW+V++  +WEH+LD+MYHA+LNL LRLAH
Sbjct: 408  APKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAH 467

Query: 1539 XXXXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
                          + ++    P+  K         LL SSL K+D+A+MLF+DF
Sbjct: 468  EIEENKELL----SLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDALMLFHDF 518


>ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
            max]
          Length = 518

 Score =  402 bits (1032), Expect = e-109
 Identities = 236/537 (43%), Positives = 326/537 (60%), Gaps = 22/537 (4%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M T +G K AVHLI  HFG +V+KVCE L   GPLT+ Q+ ++T LT K+ ++  LLVL+
Sbjct: 1    MVTQHGIKFAVHLITKHFGKIVAKVCENLFIHGPLTLDQLVRYTDLT-KDQVRNSLLVLV 59

Query: 339  QHNCVQAFSIEHQGNVGQV--VKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIV 512
            QHNCVQAF    Q +      ++V T ++V+FD ILHR+RF +FL IVS +  EEC  ++
Sbjct: 60   QHNCVQAFVSAPQDDDDDADRLRVRTQYLVLFDSILHRLRFPKFLEIVSRKLDEECVKLL 119

Query: 513  EQLLKHGRLTLEQVKESQSPHKIEA------QANFVRLVNAHFVERCPAGEPSVVPPTKE 674
            + LL+ GRLTL+Q+ + +S  K  A      +    +L+ A FVERCPA EP VV  + +
Sbjct: 120  DGLLRDGRLTLKQMVDRESQRKENAVPTKVVRETLCKLLTARFVERCPAPEP-VVSTSFK 178

Query: 675  EANAGKKRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITDTE--TDANENSMDSHLRI 848
            E    K+ +   K  E P T+EQ       P +  RF +  DT    D   NS D+ +  
Sbjct: 179  ETTTRKRGAKSAKIFEAPETLEQRVVDAAVPGDVIRFSLAADTRCSVDRETNSDDAQM-- 236

Query: 849  PVGEKRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVL 1028
                   + V E     G      ++LWR NFE+F+  LRHK  I NVR++ D+  ATVL
Sbjct: 237  -------ISVEEEVAKEG------QILWRANFEEFIRHLRHKVLIENVRTQHDDGTATVL 283

Query: 1029 SAALETKKT---------SVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSEKSGI- 1178
            SA LE  ++         SV  +L+TI  EVMKT+ GRT+T D +RASL  L    S I 
Sbjct: 284  SAVLEATRSVQKKVKTENSVPLSLDTIITEVMKTDTGRTMTVDRIRASLVQLGCSPSMIL 343

Query: 1179 -DEYSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKL 1355
             + YSIDL KII  A+NEE+ES+VLK+YG + Y+IFRLL++  C ++TD+I+    V+K 
Sbjct: 344  EESYSIDLKKIIEPARNEEVESIVLKRYGTDGYRIFRLLAKDCCFHDTDQIAASTLVEKK 403

Query: 1356 ETPKILYKLWKDAYVHMERV-ATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLRL 1532
            E  K+LYKLWKD Y++ME+V AT   K   +L+WKVNK  +WE++LD+MYHAALNLSLR+
Sbjct: 404  EASKLLYKLWKDNYLYMEKVGATVGAKQTTILMWKVNKPLLWEYVLDEMYHAALNLSLRM 463

Query: 1533 AHXXXXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
            A             +   + +  GP+  KYK+ +    LL SSL K+D+A+MLF+DF
Sbjct: 464  AFEQEKDEELLKVPK--DKRQGPGPLQKKYKKLLNVWLLLGSSLMKLDDALMLFHDF 518


>ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X3 [Citrus sinensis]
          Length = 444

 Score =  399 bits (1024), Expect = e-108
 Identities = 221/437 (50%), Positives = 288/437 (65%), Gaps = 20/437 (4%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M T YG K AVH+I +HFGDLV+KVCECL+R+GPLT Q + ++T L+ + V K  LLVLI
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQV-KNALLVLI 59

Query: 339  QHNCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQ 518
            Q NCVQAF+ E         K  T ++V+FD ILHR+RF++FL I+S+EF ++C  +V+ 
Sbjct: 60   QQNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQG 119

Query: 519  LLKHGRLTLEQV--------KESQSPHKIEAQANFVRLVNAHFVERCPAGEPSVVPPTKE 674
            LL+HGRLTL+Q+        KE         +   V+LV AH+VERCPA EP ++P ++E
Sbjct: 120  LLEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEE 179

Query: 675  EANAGKKRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITDTETDANENSMDSHLRIPV 854
            E  A KK S   K++ +P TIEQ       PMEA RF V+T+ E+D  E   +S+   P 
Sbjct: 180  EGPARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP- 238

Query: 855  GEKRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLSA 1034
            GEKRK DV E+DE   G    + V++R NFE F+ RLRHK CI +VR+ LD+ AA VLSA
Sbjct: 239  GEKRKHDVLELDEC--GVADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSA 296

Query: 1035 ALETK---------KTSVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSEK---SGI 1178
             L+           K SV  +L++IYEEV+K+E GR +T DHVRASL  L       +  
Sbjct: 297  MLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDASS 356

Query: 1179 DEYSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKLE 1358
            D YSID  KII  AQNEE+ES+V K+YG++AY+IFRLLS+   L ETDKISD  FV+K +
Sbjct: 357  DSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKKD 416

Query: 1359 TPKILYKLWKDAYVHME 1409
             PKILYKLWKD Y+ ME
Sbjct: 417  APKILYKLWKDGYLLME 433


>ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
            gi|557523805|gb|ESR35172.1| hypothetical protein
            CICLE_v10004721mg [Citrus clementina]
          Length = 433

 Score =  399 bits (1024), Expect = e-108
 Identities = 221/437 (50%), Positives = 288/437 (65%), Gaps = 20/437 (4%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M T YG K AVH+I +HFGDLV+KVCECL+R+GPLT Q + ++T L+ + V K  LLVLI
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQV-KNALLVLI 59

Query: 339  QHNCVQAFSIEHQGNVGQVVKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIVEQ 518
            Q NCVQAF+ E         K  T ++V+FD ILHR+RF++FL I+S+EF ++C  +V+ 
Sbjct: 60   QQNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQG 119

Query: 519  LLKHGRLTLEQV--------KESQSPHKIEAQANFVRLVNAHFVERCPAGEPSVVPPTKE 674
            LL+HGRLTL+Q+        KE         +   V+LV AH+VERCPA EP ++P ++E
Sbjct: 120  LLEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEE 179

Query: 675  EANAGKKRSTKLKRVEKPVTIEQLXXXXXXPMEAERFFVITDTETDANENSMDSHLRIPV 854
            E  A KK S   K++ +P TIEQ       PMEA RF V+T+ E+D  E   +S+   P 
Sbjct: 180  EGPARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP- 238

Query: 855  GEKRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATVLSA 1034
            GEKRK DV E+DE   G    + V++R NFE F+ RLRHK CI +VR+ LD+ AA VLSA
Sbjct: 239  GEKRKHDVLELDEC--GVADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSA 296

Query: 1035 ALETK---------KTSVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSEK---SGI 1178
             L+           K SV  +L++IYEEV+K+E GR +T DHVRASL  L       +  
Sbjct: 297  MLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDASS 356

Query: 1179 DEYSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDKLE 1358
            D YSID  KII  AQNEE+ES+V K+YG++AY+IFRLLS+   L ETDKISD  FV+K +
Sbjct: 357  DSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKKD 416

Query: 1359 TPKILYKLWKDAYVHME 1409
             PKILYKLWKD Y+ ME
Sbjct: 417  APKILYKLWKDGYLLME 433


>ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
            max]
          Length = 518

 Score =  392 bits (1008), Expect = e-106
 Identities = 235/538 (43%), Positives = 325/538 (60%), Gaps = 23/538 (4%)
 Frame = +3

Query: 159  MSTPYGKKLAVHLINSHFGDLVSKVCECLVRRGPLTMQQIAQHTGLTHKNVIKTCLLVLI 338
            M T +G K  VHLI  HFG +V+KVCE L   GPLT+ Q+ ++T  T K+ ++  LLVL+
Sbjct: 1    MVTEHGIKFGVHLITKHFGKIVAKVCEKLFSHGPLTLDQLVRYTDFT-KDQVRNSLLVLV 59

Query: 339  QHNCVQAFSIEHQGNVGQV--VKVLTHFMVVFDKILHRMRFSQFLVIVSEEFGEECQGIV 512
            QHNC QAF    Q +      ++V T ++V+FD I+HR+RF +FL IVS +  EEC  ++
Sbjct: 60   QHNCAQAFVSAPQDDDDDADRLRVRTQYLVLFDNIIHRLRFPKFLDIVSRKLDEECVKLL 119

Query: 513  EQLLKHGRLTLEQVKESQSPHKIEA------QANFVRLVNAHFVERCPAGEPSVVPPTKE 674
              LL+ GRLTL+Q+ + +S  K  A      +    +L+ A FVERCPA EP V    KE
Sbjct: 120  VGLLRDGRLTLKQMVDRESQGKENAVPTKVVRETLCKLLTARFVERCPAPEPVVSTSFKE 179

Query: 675  EANAGKKRSTKLKRV-EKPVTIEQLXXXXXXPMEAERFFVITD--TETDANENSMDSHLR 845
                 KKR  K  ++ E P T+EQ       P +  RF +  +  +  D   NS D    
Sbjct: 180  TTT--KKRGAKSAKIFEAPETLEQRVVDAAVPGDVIRFSLTANMGSNVDRETNSDD---- 233

Query: 846  IPVGEKRKLDVSEMDEDSGGSKSNKEVLWRVNFEKFVERLRHKACIANVRSRLDEEAATV 1025
                    + +  ++ED       +++LWR NFE+F+  LRHK  I NVR++ D+  ATV
Sbjct: 234  --------VPMISVEEDVA---KEEQILWRANFEEFIRHLRHKVLIENVRTQHDDGTATV 282

Query: 1026 LSAALET-----KKT----SVTFTLNTIYEEVMKTERGRTLTFDHVRASLAMLDSEKSGI 1178
            LSA LE      KK     SV  +L+TI  EVMKT+ GRT+T D +RASL  L    S I
Sbjct: 283  LSAVLEATGSVEKKVKMDNSVPLSLDTIITEVMKTDTGRTMTIDRIRASLVQLGCSPSMI 342

Query: 1179 --DEYSIDLNKIIAQAQNEEIESLVLKKYGKEAYKIFRLLSEKQCLYETDKISDIAFVDK 1352
              + Y IDL KII  A+NEE+ES+VLK+YG++AY++FRLL++  C ++TD+I+    V+K
Sbjct: 343  LEESYCIDLKKIIEPARNEEVESIVLKRYGRDAYRMFRLLAKDCCFHDTDQIAASTLVEK 402

Query: 1353 LETPKILYKLWKDAYVHMERV-ATATFKSQQLLLWKVNKDAVWEHILDDMYHAALNLSLR 1529
             E  K+LYKLWKD Y++ME+V ATA  K   +L+WKVNK  +WE++LD+MYHAALNLSLR
Sbjct: 403  KEASKLLYKLWKDNYLYMEKVGATAGAKQITILMWKVNKPLLWEYVLDEMYHAALNLSLR 462

Query: 1530 LAHXXXXXXXXXXXXQRMGREKFTGPIADKYKRHIETLFLLVSSLTKIDNAIMLFNDF 1703
            +A             +   RE   GP+  KYKR +    L+ SSL K+D+A+MLF+DF
Sbjct: 463  MAFEQEKDEELLKVPKDKLRE--PGPLQKKYKRLLNVRLLMGSSLLKLDDALMLFHDF 518