BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00006181
         (2333 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       676   0.0  
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   660   0.0  
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   649   0.0  
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   640   0.0  
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   634   e-179
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   624   e-176
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   617   e-174
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      608   e-171
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   607   e-171
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      607   e-171
ref|XP_004498237.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   607   e-171
ref|XP_004498236.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   607   e-171
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   604   e-170
ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis...   584   e-164
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       578   e-162
gb|EXB32317.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       576   e-161
dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]      575   e-161
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis...   575   e-161
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...   570   e-160
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   570   e-159

>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  676 bits (1743), Expect = 0.0
 Identities = 336/517 (64%), Positives = 417/517 (80%), Gaps = 4/517 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAF-VVQFTTIEDAELI 1363
            KTI++ GFPSHVS E VK FLE  TG+ TV AIK +  +N   R++ +VQF T+E AELI
Sbjct: 3    KTIQLSGFPSHVSAESVKEFLEGHTGRGTVYAIKIRPTKNGGSRSYAIVQFMTVETAELI 62

Query: 1362 ISLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRA 1183
            I LAN    RLWYGR YL AR M+ DIV KPR  + S+++  +HFGCQISKEKFS LWR 
Sbjct: 63   IRLANP---RLWYGRSYLLARVMERDIVPKPRATLYSLQNVTLHFGCQISKEKFSFLWRV 119

Query: 1182 RDATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRI 1003
             + +V FGLGLR+L F+L++  V+Y+L+L YEN+WQI    PRGQTAKYLLIQL GAPR+
Sbjct: 120  GNVSVDFGLGLRRLNFYLTYGPVEYRLQLLYENVWQIELHRPRGQTAKYLLIQLLGAPRV 179

Query: 1002 FEK--RDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFG 829
            +EK  R S +I E+  F ++ D PDDQWVRATDFT S CIG SSAL LELP G +LPD  
Sbjct: 180  YEKEVRISFDILENPLFNYFKDTPDDQWVRATDFTESCCIGHSSALYLELPYGVDLPDLR 239

Query: 828  ESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPT 649
            E+F  ++  + +F LESGS+FS+NLDLVPI+GPP G+ LP+E +FK++ L+Q GCLSGPT
Sbjct: 240  ENFVYYKESEERFILESGSSFSRNLDLVPIVGPPSGINLPFETVFKINMLLQNGCLSGPT 299

Query: 648  LDVSFFRLVDPAKI-DIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAI 472
            LDV F+RLVDP +I ++ CI YALEKL++LK C Y+P  WLN+QYRKYLT+ +PPK PAI
Sbjct: 300  LDVDFYRLVDPQRIRNVDCINYALEKLFNLKECPYEPAAWLNEQYRKYLTAPRPPKPPAI 359

Query: 471  SLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTD 292
            +LD+GLVYVRRVQ+TP+KVYF GPEINVSNRVLR Y+D+ID F+R+SF+DE+LEKL+STD
Sbjct: 360  ALDSGLVYVRRVQVTPSKVYFCGPEINVSNRVLREYIDYIDYFLRVSFVDEELEKLFSTD 419

Query: 291  LSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLN 112
            LSPRT++A+ D+RTGI+RRILS+LRNGI IG +KFEFLAFSSSQLR+NS WMFA+  G +
Sbjct: 420  LSPRTSNANEDRRTGIYRRILSVLRNGIEIGDRKFEFLAFSSSQLRDNSLWMFAAVDGHS 479

Query: 111  ASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
            A  IR+W+G+FR IRNVAKYAARLGQSFGSS ETL+V
Sbjct: 480  ADTIRQWIGDFRSIRNVAKYAARLGQSFGSSTETLTV 516


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  660 bits (1702), Expect = 0.0
 Identities = 331/518 (63%), Positives = 405/518 (78%), Gaps = 5/518 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAF-VVQFTTIEDAELI 1363
            KTI+V+GFP+ V+ E VK FLE KTG  TV A+K +  +    R + +VQFTT E A+ I
Sbjct: 3    KTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTI 62

Query: 1362 ISLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRA 1183
            ISLA +  E+LWYGR YL AR+M+ D V +PRTFM+++EH  +HFGC+IS EKF+VLWR 
Sbjct: 63   ISLACRT-EKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVLWRG 121

Query: 1182 RDATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRI 1003
             + TV FG G+RK+ F LSH   +Y+LEL YENIW+I   CPR Q  KYLLIQL GAPRI
Sbjct: 122  VNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRI 181

Query: 1002 FEK--RDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFG 829
            F+K  R    +YE   F F+ + PDDQWVR TDFT S  IGQS+ LC+ELP   ELPDF 
Sbjct: 182  FQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFK 241

Query: 828  ESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPT 649
            E+FA ++  + +F LE+GS +S++LDLVPI+GPP G+ LPYEILFK++ LVQ GC++GP 
Sbjct: 242  ENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPL 301

Query: 648  LDVSFFRLVDP--AKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPA 475
            LD +F+RLVDP  A + I+CIE+AL+KLYHLK CCY+P +WL DQYRKY+TS   P +PA
Sbjct: 302  LDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPA 361

Query: 474  ISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYST 295
            ISLD GLVYV RVQ+TP++VYF GPEINVSNRVLR++   IDNF+RISFIDEDL+K++ST
Sbjct: 362  ISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHST 421

Query: 294  DLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGL 115
            DLSPR +SA    RT I+ RILS LRNGI+IG +KFEFLAFSSSQLRE+SAWMFAS  GL
Sbjct: 422  DLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGL 481

Query: 114  NASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
             A+ IREWMGNFR+IRNVAKYAARLGQSF SSKETLSV
Sbjct: 482  TAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSV 519


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  649 bits (1674), Expect = 0.0
 Identities = 322/517 (62%), Positives = 396/517 (76%), Gaps = 3/517 (0%)
 Frame = -3

Query: 1542 SKTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAF-VVQFTTIEDAEL 1366
            SKT++V GFPS  +   V+VFLE  TG  TV A+K + I+    R + +VQFTT   AE 
Sbjct: 2    SKTVKVSGFPSSTTAGAVQVFLESHTGGGTVEALKIREIRTGGARKYAIVQFTTTRAAEQ 61

Query: 1365 IISLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWR 1186
            IISLAN    RLWYG  YL AR MD DI+ +PR+F++++E   +HFG Q SKEKFS +W 
Sbjct: 62   IISLANP---RLWYGHSYLNARPMDRDIIPQPRSFLHTMESVTLHFGYQTSKEKFSAVWS 118

Query: 1185 ARDATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPR 1006
              + +V FGLG+RKL+F LSH+  +YKL L +ENIWQI    PRGQT KYLLIQLYGAPR
Sbjct: 119  GNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPR 178

Query: 1005 IFEKR--DSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDF 832
            I+E+    S N++ED    ++ D PD+QWVR TDFT S  IG SS+LCLELP   +LP+F
Sbjct: 179  IYERDVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLPNF 238

Query: 831  GESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGP 652
             E+F  ++  +G F LESG TFS+N DLVPI+GP  GV LPY ILF+V+ LVQ GCL+G 
Sbjct: 239  NENFFYYKENEGTFVLESGLTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGS 298

Query: 651  TLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAI 472
             LD  F+RLVDP ++ + CIEYALEKLYHLK CCY+P KW N+QY+KYLTS  PP++P +
Sbjct: 299  MLDDIFYRLVDPNRMPVRCIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPVL 358

Query: 471  SLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTD 292
            SLDAGLVYV +VQITP KV+F GPE+NVSNRVLR Y + IDNF+R+SF+DE+LEK++STD
Sbjct: 359  SLDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEELEKIHSTD 418

Query: 291  LSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLN 112
            +SPRT+S +  +RT I+ RILS L+NGIVIG KKFEFLAFSSSQLRENS WMFAS LGL 
Sbjct: 419  VSPRTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLT 478

Query: 111  ASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
            A+ IR WMG+F +IRNVA+YAARLGQSFGSS ETLSV
Sbjct: 479  AADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSV 515


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  640 bits (1651), Expect = 0.0
 Identities = 327/515 (63%), Positives = 403/515 (78%), Gaps = 1/515 (0%)
 Frame = -3

Query: 1542 SKTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAFV-VQFTTIEDAEL 1366
            SKTI+VYGFPS VS + +K FLE+ TG+ T+ A++ K  ++ +      VQFT+ E AE 
Sbjct: 2    SKTIQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGASMTHAKVQFTSFELAEF 61

Query: 1365 IISLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWR 1186
            II+L  +++   WYGR+YLKAR+MDLDI+ KPR F++S++   +HFGCQ+S E+F VLW+
Sbjct: 62   IITLCKKKV---WYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVLWK 118

Query: 1185 ARDATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPR 1006
            A + +VKFG GLRK YF LSH   +YKLELSYENIWQI  + PRGQ  K+LLIQL GAP+
Sbjct: 119  AINVSVKFGSGLRKFYFFLSHGSEEYKLELSYENIWQIQLQHPRGQITKFLLIQLLGAPQ 178

Query: 1005 IFEKRDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFGE 826
            I+EK      Y      ++ + PDDQWVR  DFT S  IGQS ALCLELP G +LP+F E
Sbjct: 179  IYEKDVPVLSY------YFKEAPDDQWVREIDFTPSCFIGQSFALCLELPYGSQLPNFRE 232

Query: 825  SFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPTL 646
            +FA ++  DGKF LESGS++S NL LVPI+GPPQG  LP++ILFK++ LVQ GCLSGPTL
Sbjct: 233  NFAYYKENDGKFILESGSSYSHNLHLVPILGPPQGSSLPFQILFKINTLVQNGCLSGPTL 292

Query: 645  DVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAISL 466
            D SFFRLVDP +  I+ IE+ALEKLYHLK CCY+PV+WL++QYR Y+       +PAISL
Sbjct: 293  DTSFFRLVDPERFPISFIEHALEKLYHLKECCYEPVRWLSEQYRTYV-KKPVAGSPAISL 351

Query: 465  DAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTDLS 286
            D GLVYVRRVQITP KVYF GPE+NVSNRVLRNY + IDNF+R+SF+DE+LEK++ST +S
Sbjct: 352  DTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENLEKIHSTVIS 411

Query: 285  PRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLNAS 106
            PR  S +G +RTG++RRILSIL+NGIVIG KKF+FLAFSSSQLR+NSAWMFAS  GL A+
Sbjct: 412  PR-MSKEG-RRTGVYRRILSILQNGIVIGDKKFDFLAFSSSQLRDNSAWMFASRPGLTAA 469

Query: 105  VIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
             IR WMG+F QIRNVAKYAARLGQSF SSKETL V
Sbjct: 470  EIRSWMGDFSQIRNVAKYAARLGQSFSSSKETLKV 504


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  634 bits (1634), Expect = e-179
 Identities = 322/515 (62%), Positives = 397/515 (77%), Gaps = 2/515 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAFVVQFTTIEDAELII 1360
            KTI+V  FPS+V  E VK FLE  TGKETV A+K +  +N  R   +VQFT   DAELII
Sbjct: 3    KTIQVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQKNGGRAYAIVQFTKSTDAELII 62

Query: 1359 SLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRAR 1180
             L NQ   RL+YG  YLKAR+M+ DIV KPRTF++++E   +HFGCQ+S EKF VLW   
Sbjct: 63   RLTNQ---RLYYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWEEV 119

Query: 1179 DATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRIF 1000
            D TV FG+G+RKL F LSH  V+Y+L+L YENIWQI    PR QT+KYLLIQL+GAPRI+
Sbjct: 120  DVTVNFGMGMRKLQFLLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLIQLFGAPRIY 179

Query: 999  EK--RDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFGE 826
            EK  R SG ++E+    +++D PDDQWVR TDFT S CIGQSS LCLELP   +LP+F E
Sbjct: 180  EKDVRSSGLVFENPLLNYFMDVPDDQWVRTTDFTQSSCIGQSSVLCLELPYYLQLPNFRE 239

Query: 825  SFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPTL 646
            +FA ++  +GKF LESGS++S+NL+LVPI+GP  G+ LPYEILFK++ LVQ GC+ GP L
Sbjct: 240  NFAYYKESEGKFVLESGSSYSRNLNLVPIVGPSLGIDLPYEILFKINLLVQNGCIPGPAL 299

Query: 645  DVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAISL 466
            D +F+RLV+P +ID   I++ALEKLY+LK CC++P KWL +QY+ Y+ S + P +P ISL
Sbjct: 300  DANFYRLVNPCRIDKVYIDHALEKLYYLKECCFEPSKWLLEQYKGYIASKKNPGSPVISL 359

Query: 465  DAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTDLS 286
            D GLV VRRVQITP++VYF GPEINVSNRVLR++ D IDNF+RI+F+DE+LEK++STDL 
Sbjct: 360  DDGLVNVRRVQITPSRVYFCGPEINVSNRVLRHFHDDIDNFLRITFVDEELEKIHSTDLL 419

Query: 285  PRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLNAS 106
             R      ++ T I+ RILS L+NGIVIG K+FEFLAFSSSQLRENSAWMFAS  GL A+
Sbjct: 420  TR------NRITEIYGRILSTLKNGIVIGDKQFEFLAFSSSQLRENSAWMFASREGLTAA 473

Query: 105  VIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
             IR WMG F +IRNVAKYAARLGQSF SS ETLSV
Sbjct: 474  DIRTWMGEFSKIRNVAKYAARLGQSFSSSTETLSV 508


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  624 bits (1609), Expect = e-176
 Identities = 323/514 (62%), Positives = 400/514 (77%), Gaps = 1/514 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQN-TSRRAFVVQFTTIEDAELI 1363
            KTI+VYG PS+VS   +K FLE+ TG+ T+ A++ K  ++  S     VQFT++  AELI
Sbjct: 3    KTIQVYGVPSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVSMTHAKVQFTSLRLAELI 62

Query: 1362 ISLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRA 1183
            ISLA Q    LWYG +YLKAR+MDLDI+ KPRTF++S++   +HFG Q+S E+F VLW+A
Sbjct: 63   ISLAKQ----LWYGGNYLKAREMDLDIIPKPRTFLHSMDRITLHFGYQMSNERFCVLWKA 118

Query: 1182 RDATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRI 1003
             + +VKFG GLRK YF LSH   +YKLELS ENIWQI  R PRGQ  K+LLIQL  AP+I
Sbjct: 119  INVSVKFGFGLRKFYFFLSHGSEEYKLELSCENIWQIQLREPRGQNTKFLLIQLLDAPQI 178

Query: 1002 FEKRDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFGES 823
            +EK  S       A +++ + PDDQWVR  DFT S  IGQSSALCLELP G +LP+F E+
Sbjct: 179  YEKDVS-------ALSYFKETPDDQWVREIDFTPSCSIGQSSALCLELPHGSQLPNFCEN 231

Query: 822  FADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPTLD 643
            FA ++  D KF LESG++FS NL LVPI+GPPQG  LP++ILFK++ LVQ GCLSGPTLD
Sbjct: 232  FARYKENDRKFILESGASFSGNLHLVPIVGPPQGSNLPFKILFKINTLVQNGCLSGPTLD 291

Query: 642  VSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAISLD 463
             +FFR VDP +I+I+ IE+ALEKLY+L+ CCY+PV+WL++QYR Y+ S Q   +PAISLD
Sbjct: 292  TNFFRWVDPQRINISFIEHALEKLYYLEECCYEPVRWLHEQYRTYI-SKQVAGSPAISLD 350

Query: 462  AGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTDLSP 283
             GLVYVRRVQITP KVYF GPE+NVSNRVLRNY + IDNF+R+SF+DE+ EK++ST +SP
Sbjct: 351  TGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENSEKIHSTVISP 410

Query: 282  RTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLNASV 103
            R ++    +RTG++RRILSIL+NGIVIG KKF+FLA SSSQLR+NSAWMFAS  GL A+ 
Sbjct: 411  RMSNE--GRRTGVYRRILSILQNGIVIGDKKFDFLAVSSSQLRDNSAWMFASRPGLTAAD 468

Query: 102  IREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
            IR  MG+F QIRNVAKYAARLGQSF SSKETL V
Sbjct: 469  IRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKV 502


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
            max] gi|571439308|ref|XP_006574822.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
            max] gi|571439310|ref|XP_006574823.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
            max]
          Length = 1125

 Score =  617 bits (1592), Expect = e-174
 Identities = 310/517 (59%), Positives = 394/517 (76%), Gaps = 4/517 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAF-VVQFTTIEDAELI 1363
            KTIE+YGFP+ V+   VK F+EQ TG+ TV AIK ++ +    RAF ++QFTT   A  +
Sbjct: 3    KTIELYGFPTSVNVSDVKTFVEQYTGEGTVFAIKLRHGKGRVPRAFAIIQFTTANSATSM 62

Query: 1362 ISLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRA 1183
            +S AN  +  L YG  YLKAR+M+ DIV +PR F++S++   + FGCQISK +FSVLW+ 
Sbjct: 63   MSRANNILRTLRYGTSYLKAREMERDIVPRPRVFLHSLDDVKLSFGCQISKGRFSVLWKK 122

Query: 1182 RDATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRI 1003
            +D  V FG G+RK++F  SH++V YKLELSYENIW+I    PR +T +YLLIQL GAPR+
Sbjct: 123  QDVIVNFGSGMRKMHFLFSHNNVQYKLELSYENIWKIELHRPRNETTRYLLIQLLGAPRV 182

Query: 1002 FEKR--DSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFG 829
            FE     S NI++D  F F+ D PD+QW+RA DFT    IGQSSA+CLELP GR+LP+F 
Sbjct: 183  FENDVPTSTNIFDDPLFNFFKDAPDEQWIRAIDFTPESRIGQSSAICLELPNGRQLPNFR 242

Query: 828  ESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPT 649
            E+FA +E  + +++L++G  FS+N  LVPI+ PP GV + Y+ILFKV+ LVQ+ CL+GP 
Sbjct: 243  ENFAYYEESERQYTLQTGVPFSQNWGLVPIVAPPLGVKISYDILFKVNSLVQHACLAGPA 302

Query: 648  LDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAIS 469
            LD  F+RLVDP ++    IEYALEK+Y+ K  CY+P KWL DQY+ YL S   P++PAIS
Sbjct: 303  LDGDFYRLVDPRRMPREFIEYALEKIYYSKEFCYEPTKWLTDQYKTYLESKNHPRSPAIS 362

Query: 468  LDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTDL 289
            LD GLVYVRRVQITP KVYF GPE+NVSNRVLR++ +HIDNF+R+SF+DE+L+KL+STDL
Sbjct: 363  LDTGLVYVRRVQITPCKVYFCGPEMNVSNRVLRHFREHIDNFLRVSFVDEELDKLFSTDL 422

Query: 288  SPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFA-SSLGLN 112
            S R+     +K+T I+ RILSIL+NGIV+G KKFEFLAFSSSQLRENS WMFA +  G  
Sbjct: 423  SSRSQ----NKKTEIYTRILSILKNGIVVGDKKFEFLAFSSSQLRENSLWMFAPTETGCT 478

Query: 111  ASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
            A+ IR+WMGNF QIRNVAKYAARLGQSFGSS ETLSV
Sbjct: 479  AAYIRKWMGNFSQIRNVAKYAARLGQSFGSSTETLSV 515


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  608 bits (1567), Expect = e-171
 Identities = 309/515 (60%), Positives = 391/515 (75%), Gaps = 2/515 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAFVVQFTTIEDAELII 1360
            KTI+VYGF S VS   VK FLE  TG+ETV A+K +  + + R   +VQFT   DA LII
Sbjct: 3    KTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSGRAFAIVQFTRSSDAGLII 62

Query: 1359 SLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRAR 1180
             LANQ   RL+YGR YLKAR+M+ DIV KPR F++++E   ++FGCQ+S+EKF VLW+A 
Sbjct: 63   RLANQ---RLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLWKAD 119

Query: 1179 DATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRIF 1000
            + T+ FG G+RKL F LS+    YKLEL YENIWQI  RCP  QT+K+LLIQL+GAPRI+
Sbjct: 120  NVTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPRIY 179

Query: 999  EKRDSGN--IYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFGE 826
            EK    +  +++D    ++ D PDDQWVR TDFT S CIGQSS L LELP   +LP+F E
Sbjct: 180  EKEVPASECVFDDPLLNYFKDMPDDQWVRTTDFTRSNCIGQSSVLWLELPHNLQLPNFRE 239

Query: 825  SFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPTL 646
            +FA ++  +G+  LESGS++S NL LVPI+ P + + LP+EILFKV+ LVQ GC+ GP L
Sbjct: 240  NFAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVIDLPFEILFKVNLLVQNGCIPGPAL 299

Query: 645  DVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAISL 466
            D +F+RLVDP ++    I++ALEKLY+L+ CCY+P +WL ++Y+ +  S +   +P ISL
Sbjct: 300  DDTFYRLVDPCRMHKVYIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTISL 359

Query: 465  DAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTDLS 286
            D GLVYVRRVQITP++VYF GPEINVSNRVLR + + IDNF+RISF+DE+LEK++ST++ 
Sbjct: 360  DEGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSTNVQ 419

Query: 285  PRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLNAS 106
             R       +RTGI++RILS LRNGIVIG+K+FEFLAFSSSQLRENSAWMFAS  GL A+
Sbjct: 420  AR------GRRTGIYKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLTAA 473

Query: 105  VIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
             IR WMGNF +IRNVAKYAARLGQSF SS ETLSV
Sbjct: 474  DIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSV 508


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
            vesca]
          Length = 1119

 Score =  607 bits (1566), Expect = e-171
 Identities = 309/516 (59%), Positives = 390/516 (75%), Gaps = 3/516 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAFVVQFTTIEDAELII 1360
            KTI+++GFPS  + E +K FLE+ TG+ +V A+K +  ++  R   ++QF +I  AE II
Sbjct: 3    KTIQLHGFPSGQTAENIKEFLEKHTGEGSVFALKLRPAKSGGRFYAIIQFQSISQAEKII 62

Query: 1359 SLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRAR 1180
            SLAN    RLWYGR YL AR    DIV KPRTF++S+   ++H GCQ++K+KFSVLW   
Sbjct: 63   SLANA---RLWYGRSYLNARPAH-DIVPKPRTFLHSLRDLVLHVGCQVAKDKFSVLWGTA 118

Query: 1179 DATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRIF 1000
            + +V FG G+R L F L +    Y+L+LSYENIWQI     RG++AKYL+IQLYG PRI+
Sbjct: 119  EVSVDFGFGMRNLQFRLLYRQKVYRLQLSYENIWQIELHHQRGRSAKYLVIQLYGNPRIY 178

Query: 999  EKR---DSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFG 829
            ++      GN YED    ++ DP  D WVR TDFT   CIGQSS+LCL L    ELPDF 
Sbjct: 179  QQEVCSSGGNGYED--MNYFRDP--DDWVRTTDFTPGSCIGQSSSLCLVLTSDGELPDFE 234

Query: 828  ESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPT 649
            E+FA ++  DG+F LE+GSTFS+N DLVPI+G P G+ LPY+ILFK++ LVQ GCLSGPT
Sbjct: 235  ENFAYYKKTDGQFILENGSTFSRNRDLVPIVGSPAGIDLPYDILFKINLLVQQGCLSGPT 294

Query: 648  LDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAIS 469
            LD +F+RLVDP +I   CIE+AL+KL +LK  CY+P  WLN++YRKY+ S +PPK   IS
Sbjct: 295  LDNNFYRLVDPRRISRPCIEFALDKLSNLKESCYEPAVWLNEEYRKYMMSKKPPKPALIS 354

Query: 468  LDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTDL 289
            LD+GLVYVRRVQITP+KVYFSGPE+NVSNR+LR Y   IDNF+R+SF+DE++EKLYSTDL
Sbjct: 355  LDSGLVYVRRVQITPSKVYFSGPEVNVSNRILRQYSSDIDNFLRVSFVDEEMEKLYSTDL 414

Query: 288  SPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLNA 109
            SPRT++    ++T I+ R+LS+LR+GIV+G KKFEFLAFSSSQLRENS WMFA +   +A
Sbjct: 415  SPRTST----RKTRIYNRVLSVLRDGIVVGKKKFEFLAFSSSQLRENSLWMFAPTDEDSA 470

Query: 108  SVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
              IR  MG+FRQIRNVAKYAARLGQSFGSS ETLSV
Sbjct: 471  DTIRAGMGDFRQIRNVAKYAARLGQSFGSSTETLSV 506


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  607 bits (1566), Expect = e-171
 Identities = 308/515 (59%), Positives = 390/515 (75%), Gaps = 2/515 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAFVVQFTTIEDAELII 1360
            KTI+VYGF S VS   VK FLE  TG+ETV A+K +  + + R   +VQFT   DA LII
Sbjct: 3    KTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSGRAFAIVQFTRSSDAGLII 62

Query: 1359 SLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRAR 1180
             LANQ   RL+YGR YLKAR+M+ DIV KPR F++++E   ++F C +S+EKF VLW+A 
Sbjct: 63   RLANQ---RLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFDCHVSEEKFYVLWKAD 119

Query: 1179 DATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRIF 1000
            + T+ FG G+RKL F LS+    YKLEL YENIWQI  RCP  QT+K+LLIQL+GAPRI+
Sbjct: 120  NVTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPRIY 179

Query: 999  EKRDSGN--IYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFGE 826
            EK    +  +++D    ++ D PDDQWVR TDFT S CIGQSS LCLELP   +LP+F E
Sbjct: 180  EKEVPASECVFDDPLLNYFKDMPDDQWVRTTDFTRSNCIGQSSVLCLELPHNLQLPNFRE 239

Query: 825  SFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPTL 646
            +FA ++  +G+  LESGS++S NL LVPI+ P + + LP+EILFKV+ LVQ GC+ GP L
Sbjct: 240  NFAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVIDLPFEILFKVNLLVQNGCIPGPAL 299

Query: 645  DVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAISL 466
            D +F+RLVDP ++    I++ALEKLY+L+ CCY+P +WL ++Y+ +  S +   +P ISL
Sbjct: 300  DDTFYRLVDPCRMHKVYIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTISL 359

Query: 465  DAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTDLS 286
            D GLVYVRRVQITP++VYF GPEINVSNRVLR + + IDNF+RISF+DE+LEK++ST++ 
Sbjct: 360  DEGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSTNVQ 419

Query: 285  PRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLNAS 106
             R       +RTGI++RILS LRNGIVIG+K+FEFLAFSSSQLRENSAWMFAS  GL A+
Sbjct: 420  AR------GRRTGIYKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLTAA 473

Query: 105  VIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
             IR WMGNF +IRNVAKYAARLGQSF SS ETLSV
Sbjct: 474  DIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSV 508


>ref|XP_004498237.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Cicer
            arietinum]
          Length = 1100

 Score =  607 bits (1565), Expect = e-171
 Identities = 308/523 (58%), Positives = 392/523 (74%), Gaps = 6/523 (1%)
 Frame = -3

Query: 1551 MNKSKTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAF-VVQFTTIED 1375
            M KSKTIE+YGFP+ V    VK F+E+ TG+ +V AIK +  +   +RA+ ++QF T   
Sbjct: 1    MGKSKTIELYGFPTSVVVPDVKRFVERFTGEGSVVAIKIREGKARVQRAYAIIQFNTANQ 60

Query: 1374 AELIISLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSV 1195
            A  ++SL N+    L YG  YLK R+M  DIV  PRT++ S++   ++FGCQISKE+FS+
Sbjct: 61   ATHMLSLHNRSSTMLRYGNSYLKIREMVRDIVPNPRTYLESLDDVTLYFGCQISKERFSI 120

Query: 1194 LWRARDATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYG 1015
            LWR RD +V    G+RK  F + HD+  +K +LSYENIW+I    P G+TAKYLLIQL G
Sbjct: 121  LWRKRDVSVDLSAGMRKWRFCMCHDNKKFKFDLSYENIWKIEQYQPWGKTAKYLLIQLIG 180

Query: 1014 APRIFE----KRDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGR 847
            APRIFE       S N+YED    ++ + PDDQW+RA DFT   CIGQSSA+CLELP  R
Sbjct: 181  APRIFELYVPTSTSTNVYEDPLKNYFKESPDDQWIRAVDFTPFNCIGQSSAICLELPCDR 240

Query: 846  ELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYG 667
            + P+  E F  ++  +G+++LESGS FS NLD+VPI+ PPQG+ +P++ILFKV+ LVQ+G
Sbjct: 241  DFPNIREYFVHYQENEGQYTLESGSPFSHNLDVVPIVAPPQGIYIPFDILFKVNSLVQHG 300

Query: 666  CLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPP 487
            CLSG  LD +F+ LVDP +I++  IE+ALEK+Y+ K+ CY+P +WL DQYR YL S+ P 
Sbjct: 301  CLSGSELDNAFYCLVDPLRINVDFIEHALEKMYYSKDFCYEPARWLKDQYRMYLNSNYPL 360

Query: 486  KAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEK 307
            ++P+ISLD GLVYVRRVQITP KVYF GPEINVSNRV+R++ +HIDNF+R+SF+DE+L+K
Sbjct: 361  QSPSISLDNGLVYVRRVQITPCKVYFCGPEINVSNRVVRHFHEHIDNFLRVSFVDEELDK 420

Query: 306  LYSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFA- 130
            LYSTDLS R +      RT ++ RILSILRNGIVIG KKFEFLAFSSSQLRENS WMFA 
Sbjct: 421  LYSTDLSSRISVG---VRTEVYNRILSILRNGIVIGDKKFEFLAFSSSQLRENSLWMFAP 477

Query: 129  SSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
            ++ GL A  IR WMG+F QIRNVAKYAARLGQSFGSS ETLSV
Sbjct: 478  TATGLTAQFIRAWMGDFSQIRNVAKYAARLGQSFGSSTETLSV 520


>ref|XP_004498236.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Cicer
            arietinum]
          Length = 1126

 Score =  607 bits (1565), Expect = e-171
 Identities = 308/523 (58%), Positives = 392/523 (74%), Gaps = 6/523 (1%)
 Frame = -3

Query: 1551 MNKSKTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAF-VVQFTTIED 1375
            M KSKTIE+YGFP+ V    VK F+E+ TG+ +V AIK +  +   +RA+ ++QF T   
Sbjct: 1    MGKSKTIELYGFPTSVVVPDVKRFVERFTGEGSVVAIKIREGKARVQRAYAIIQFNTANQ 60

Query: 1374 AELIISLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSV 1195
            A  ++SL N+    L YG  YLK R+M  DIV  PRT++ S++   ++FGCQISKE+FS+
Sbjct: 61   ATHMLSLHNRSSTMLRYGNSYLKIREMVRDIVPNPRTYLESLDDVTLYFGCQISKERFSI 120

Query: 1194 LWRARDATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYG 1015
            LWR RD +V    G+RK  F + HD+  +K +LSYENIW+I    P G+TAKYLLIQL G
Sbjct: 121  LWRKRDVSVDLSAGMRKWRFCMCHDNKKFKFDLSYENIWKIEQYQPWGKTAKYLLIQLIG 180

Query: 1014 APRIFE----KRDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGR 847
            APRIFE       S N+YED    ++ + PDDQW+RA DFT   CIGQSSA+CLELP  R
Sbjct: 181  APRIFELYVPTSTSTNVYEDPLKNYFKESPDDQWIRAVDFTPFNCIGQSSAICLELPCDR 240

Query: 846  ELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYG 667
            + P+  E F  ++  +G+++LESGS FS NLD+VPI+ PPQG+ +P++ILFKV+ LVQ+G
Sbjct: 241  DFPNIREYFVHYQENEGQYTLESGSPFSHNLDVVPIVAPPQGIYIPFDILFKVNSLVQHG 300

Query: 666  CLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPP 487
            CLSG  LD +F+ LVDP +I++  IE+ALEK+Y+ K+ CY+P +WL DQYR YL S+ P 
Sbjct: 301  CLSGSELDNAFYCLVDPLRINVDFIEHALEKMYYSKDFCYEPARWLKDQYRMYLNSNYPL 360

Query: 486  KAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEK 307
            ++P+ISLD GLVYVRRVQITP KVYF GPEINVSNRV+R++ +HIDNF+R+SF+DE+L+K
Sbjct: 361  QSPSISLDNGLVYVRRVQITPCKVYFCGPEINVSNRVVRHFHEHIDNFLRVSFVDEELDK 420

Query: 306  LYSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFA- 130
            LYSTDLS R +      RT ++ RILSILRNGIVIG KKFEFLAFSSSQLRENS WMFA 
Sbjct: 421  LYSTDLSSRISVG---VRTEVYNRILSILRNGIVIGDKKFEFLAFSSSQLRENSLWMFAP 477

Query: 129  SSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
            ++ GL A  IR WMG+F QIRNVAKYAARLGQSFGSS ETLSV
Sbjct: 478  TATGLTAQFIRAWMGDFSQIRNVAKYAARLGQSFGSSTETLSV 520


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  604 bits (1557), Expect = e-170
 Identities = 308/514 (59%), Positives = 390/514 (75%), Gaps = 1/514 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAFV-VQFTTIEDAELI 1363
            +TI+V+GFP  V+ ELVK FLE  TG+ TV A++ K  +   RRA+  VQFT I  AE I
Sbjct: 3    RTIQVFGFPYLVAAELVKKFLENYTGEGTVIALEVKTAK-VGRRAYARVQFTNIRCAETI 61

Query: 1362 ISLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRA 1183
            I LA     RL+YG  YLKA + D+DIVQ PRTF + +E+  ++FGCQIS  KFSVLW+ 
Sbjct: 62   IDLAKN---RLYYGTSYLKAYESDIDIVQNPRTFAHEMENVTLNFGCQISPHKFSVLWKG 118

Query: 1182 RDATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRI 1003
               TVKFG G++K++F L H+ V+YK++LSYENIWQI      GQ++K L+IQL+GAPRI
Sbjct: 119  ESVTVKFGTGMKKMHFFLRHNSVEYKMQLSYENIWQIVLYNSYGQSSKLLVIQLFGAPRI 178

Query: 1002 FEKRDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFGES 823
            ++K  SG++Y     ++++   DDQWVR TDFT S  IGQSS+LCL+LP G  LP+F ++
Sbjct: 179  YKKL-SGSVY-----SYFMVTQDDQWVRTTDFTQSL-IGQSSSLCLQLPYGMRLPNFRDN 231

Query: 822  FADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPTLD 643
            F  ++  +  F LE+G  FS N DLVPI+ PP  + LPY +LFKV  LVQ GCL GP LD
Sbjct: 232  FLYYKESETPFRLETGVPFSHNSDLVPIVRPPIDIKLPYTLLFKVCSLVQTGCLPGPKLD 291

Query: 642  VSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAISLD 463
             SFF LV+PAK DI  IE+ALEKLY+LK CCY+P  WL +QY +Y TS + PK+PAI LD
Sbjct: 292  RSFFDLVNPAKHDIRYIEHALEKLYYLKECCYNPAAWLKEQYERYRTSKEHPKSPAICLD 351

Query: 462  AGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTDLSP 283
             GLVYV RVQ+TPT+VYFSGPE+NVSNRVLR+Y D+IDNF+R+SF+DE+ +K+YSTDLSP
Sbjct: 352  DGLVYVHRVQVTPTRVYFSGPEVNVSNRVLRHYRDYIDNFLRVSFVDEEWDKMYSTDLSP 411

Query: 282  RTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLNASV 103
            R A+ D +KRT ++ R++SILR+G+ IG +KF+FLAFSSSQLR+NS WMFA + GLNA  
Sbjct: 412  RVAAGDENKRTKLYERVISILRDGVRIGDRKFDFLAFSSSQLRDNSLWMFAPTDGLNADG 471

Query: 102  IREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
            IREWMG+F  IRNVAKYAARLGQSFGSS ETLSV
Sbjct: 472  IREWMGDFSSIRNVAKYAARLGQSFGSSTETLSV 505


>ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
            gi|316989901|gb|ADU77016.1| RNA-dependent RNA polymerase
            1b [Cucumis sativus]
          Length = 1115

 Score =  584 bits (1505), Expect = e-164
 Identities = 299/516 (57%), Positives = 377/516 (73%), Gaps = 3/516 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAF-VVQFTTIEDAELI 1363
            KTI+++GFPS V QE VK F+E  TG  T+ AI  K  +   RR + ++QFT  E A+ I
Sbjct: 3    KTIQLFGFPSGVLQESVKTFVEGITGTGTIDAINTKRSKGGGRRVYAIIQFTDEEGAKSI 62

Query: 1362 ISLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRA 1183
            IS A    ERL YG  YLKAR+M  DI+  P  F  + +   +H GCQISKE FSVLW  
Sbjct: 63   ISKAT---ERLCYGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTE 119

Query: 1182 RDATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRI 1003
             + +V FG  LRKLYF +S+  VDY L L YENIWQ+    P GQ+  YLLIQL+GAPRI
Sbjct: 120  SNVSVDFGFELRKLYFFISYPRVDYMLVLRYENIWQVELHKPHGQSVDYLLIQLFGAPRI 179

Query: 1002 FEK--RDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFG 829
            +E+  R  G I ED    F  +  D QW RATDFT S  IGQS+ALCLE+P GR+LP+F 
Sbjct: 180  YERDARSFGLITEDPFLNFSTEI-DTQWFRATDFTPSCSIGQSAALCLEIPYGRQLPNFH 238

Query: 828  ESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPT 649
            + FA F+   GKF+L SGST+S N++LVP++ PP+ + LPY ILFK++ LVQ GCL GP 
Sbjct: 239  DKFAYFKEIKGKFTLVSGSTYSSNVNLVPVVTPPRTINLPYTILFKINLLVQQGCLPGPA 298

Query: 648  LDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAIS 469
            LD+SF+++VD    + A I++AL+KL HLK CCY+P KWL+++YRKY     PP+ P ++
Sbjct: 299  LDISFYQMVDSQIYNTAVIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILT 358

Query: 468  LDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTDL 289
            L+ GLVYV RVQ+TP KVYF GPE+N+SNRVLR Y D+IDNF+R+SF+DE+L K+YST+L
Sbjct: 359  LNEGLVYVHRVQVTPCKVYFCGPEVNISNRVLRRYPDYIDNFLRVSFVDEELGKMYSTEL 418

Query: 288  SPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLNA 109
            SPR +S+  D +T IF+RILS+LR+GI IG KKFEFLA+SSSQLREN+AWMFA    L A
Sbjct: 419  SPRASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTA 478

Query: 108  SVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
            + IR+WMG+F  IRNVAKYAARLGQSFGSS ETLSV
Sbjct: 479  AKIRQWMGDFHNIRNVAKYAARLGQSFGSSTETLSV 514


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  578 bits (1491), Expect = e-162
 Identities = 301/516 (58%), Positives = 389/516 (75%), Gaps = 3/516 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAFV-VQFTTIEDAELI 1363
            KTI+V+GFP  +S E VK FLE  TG  TV A++ K  +   RRAF  VQF   + AE I
Sbjct: 3    KTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKG-GRRAFAKVQFANNKSAEFI 61

Query: 1362 ISLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRA 1183
            I LA++    L+YG  YLKA +M  DIVQ PRT++  ++   ++FGCQIS +KF+VL  +
Sbjct: 62   IDLASKG---LYYGPSYLKAWEMKTDIVQ-PRTYVEHMDGVTLNFGCQISDKKFAVLG-S 116

Query: 1182 RDATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRI 1003
            +D ++KFG+GL+K+YF LSH   DYKL+LSYENIWQ+    P GQ A++LL+QL+GAPRI
Sbjct: 117  KDVSIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQLFGAPRI 176

Query: 1002 FEKRDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFGES 823
            +++       ED  ++F+ + PDDQWVR TDFT S+ IG SS+LCLE   G +LP+F ES
Sbjct: 177  YKR------LEDSCYSFFKETPDDQWVRTTDFTPSW-IGLSSSLCLEFRNGVQLPNFSES 229

Query: 822  FADFEAKDGKFSLESGSTFS--KNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPT 649
            F  ++    +F L++G TFS  + L LVPI+  P+G+ LPY+ILFK+S L+Q+GC  G  
Sbjct: 230  FFYYKESMNQFILQTGFTFSFSQKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLA 289

Query: 648  LDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAIS 469
            L+ +FF+LVDP + +IACIE+ALEKLY+LK CCYDPV+WL +QY +YL   Q PK+P I+
Sbjct: 290  LNFNFFQLVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPPIT 349

Query: 468  LDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTDL 289
            LD GLVYVRRV +TP KVYF GPE+NVSNRVLRNY + I+NF+R+SF+DE+ EK++STDL
Sbjct: 350  LDDGLVYVRRVVVTPCKVYFCGPEVNVSNRVLRNYSEDINNFLRVSFVDEEWEKIHSTDL 409

Query: 288  SPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLNA 109
             PR ++ +G  RT I+ RILS LRNG +IG K+FEFLAFSSSQLR+NS WMFAS  GL A
Sbjct: 410  LPRASTGNG-TRTDIYERILSTLRNGFIIGDKRFEFLAFSSSQLRDNSVWMFASRPGLTA 468

Query: 108  SVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
            + IR WMG+FRQIRNVAKYAARLGQSFGSS+ETLSV
Sbjct: 469  NDIRTWMGDFRQIRNVAKYAARLGQSFGSSRETLSV 504


>gb|EXB32317.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 862

 Score =  576 bits (1485), Expect = e-161
 Identities = 292/514 (56%), Positives = 369/514 (71%)
 Frame = -3

Query: 1542 SKTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAFVVQFTTIEDAELI 1363
            +KTI++YGF     QE VK  LE  TG+ TV +++F   ++ SR    V+F   E AE++
Sbjct: 2    AKTIQLYGFSCVEDQEEVKRHLELYTGEGTVCSVEFAQCKSGSRAHAKVEFVDSESAEIL 61

Query: 1362 ISLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRA 1183
             SLA+    R WYG  YLKAR    ++V+KP  F+ S++   +HFGCQ+ KEKFSVLW  
Sbjct: 62   KSLADDD-RRFWYGDSYLKARDWSTEVVRKPEVFLCSMDDVTLHFGCQVLKEKFSVLWER 120

Query: 1182 RDATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRI 1003
             +  VKFG G RKLYF LS+  VDYKLE+SYENIWQI      G+T+K+LL+QL GAPRI
Sbjct: 121  ENVCVKFGEGQRKLYFFLSYGSVDYKLEISYENIWQIKLHRMHGETSKFLLLQLLGAPRI 180

Query: 1002 FEKRDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFGES 823
            F+K +                    W R  DFT S CIGQSSALCLE+P  R+LP+  + 
Sbjct: 181  FQKVNRC------------------WERDVDFTPSCCIGQSSALCLEIPNWRQLPNLRDV 222

Query: 822  FADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPTLD 643
            F  ++  +G+FSL+ G  FS + DLVP++ PP+G++LPY+ILFKV+ LVQ+GCL    LD
Sbjct: 223  FVYYKEDEGQFSLQQGCPFSSSSDLVPMVVPPKGIILPYKILFKVNSLVQHGCLPAEVLD 282

Query: 642  VSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAISLD 463
            ++FFRLVDP++I + CIE AL+KLYHLK+CCYDP++WL  QY KY TS Q PK P I+L+
Sbjct: 283  LNFFRLVDPSRIPLECIESALDKLYHLKDCCYDPLRWLKKQYIKYNTSGQIPKMPTIALE 342

Query: 462  AGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTDLSP 283
             GLVYV RVQ+TPTKVYF GPEIN+SNRVLRNY   IDNF+R+SF+DE+L+KL STDL  
Sbjct: 343  DGLVYVHRVQVTPTKVYFCGPEINLSNRVLRNYPKDIDNFLRVSFVDENLDKLSSTDLCA 402

Query: 282  RTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLNASV 103
            R +SA+G +RT ++ RIL  LRNGI+IG KKFEFLAFSSSQL+E S WMFAS  GL A+ 
Sbjct: 403  RGSSANGKRRTRLYDRILFTLRNGILIGDKKFEFLAFSSSQLKEGSLWMFASRDGLTAAD 462

Query: 102  IREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
            IR WMG+F  I+NVA+YAARLGQSFGSS ET  V
Sbjct: 463  IRNWMGDFHDIKNVARYAARLGQSFGSSHETFRV 496


>dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]
          Length = 1115

 Score =  575 bits (1482), Expect = e-161
 Identities = 295/516 (57%), Positives = 374/516 (72%), Gaps = 3/516 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAF-VVQFTTIEDAELI 1363
            KTI+++GFPS V QE VK F+E  TG  T+ AI  K  +   RR + ++QFT  E A+ I
Sbjct: 3    KTIQLFGFPSGVLQESVKTFVEGITGTGTIDAINTKRSKGGGRRVYAIIQFTDEEGAKSI 62

Query: 1362 ISLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRA 1183
            IS A    ERL YG  YLKAR+M  DI+  P  F  + +   +H GCQISKE FSVLW  
Sbjct: 63   ISKAT---ERLCYGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTE 119

Query: 1182 RDATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRI 1003
             + +V FG  +RKLYF +S+  VDY L L YENIWQ+    P GQ+  YLLIQL+GAPRI
Sbjct: 120  SNVSVDFGFDVRKLYFFISYPRVDYMLVLRYENIWQVELHKPHGQSVDYLLIQLFGAPRI 179

Query: 1002 FEK--RDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFG 829
            +E+  R  G I ED    F  +  D QW RATDFT S  IGQS+ALCLE+  GR+LP+F 
Sbjct: 180  YERDARSFGLITEDPFLNFSTEI-DTQWFRATDFTPSCSIGQSAALCLEILYGRQLPNFH 238

Query: 828  ESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPT 649
            + FA F+   GKF+L SGST+S N++LVP++ PP+ + LPY ILFK++ LVQ GCL GP 
Sbjct: 239  DKFAYFKEIKGKFTLVSGSTYSSNVNLVPVVTPPRTINLPYTILFKINLLVQQGCLPGPA 298

Query: 648  LDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAIS 469
            LD+SF+++VD    + A I++AL+KL HLK CCY+P KWL+++YRKY     PP+ P ++
Sbjct: 299  LDISFYQMVDSQIYNTAVIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILT 358

Query: 468  LDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTDL 289
            L+ GLVYV RVQ+TP KVYF GPE+N+SNRVLR Y D+IDNF+R+SF+DE+L K+YST+L
Sbjct: 359  LNEGLVYVHRVQVTPCKVYFCGPEVNISNRVLRRYPDYIDNFLRVSFVDEELGKMYSTEL 418

Query: 288  SPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLNA 109
            SPR +S+  D +T I +RILS+LR+GI IG KKFEFLA+SSSQLREN+AWMFA    L A
Sbjct: 419  SPRASSSLEDGKTKILKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTA 478

Query: 108  SVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
            + IR+WMG+F  IRNVAKYAARLGQ FGSS ETLSV
Sbjct: 479  AKIRQWMGDFHNIRNVAKYAARLGQPFGSSTETLSV 514


>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
            gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
            1a [Cucumis sativus]
          Length = 1130

 Score =  575 bits (1481), Expect = e-161
 Identities = 301/518 (58%), Positives = 379/518 (73%), Gaps = 5/518 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAF-VVQFTTIEDAELI 1363
            KTI + GFPSHV+ + VK FLE  TG  TV AIK +  +    R + +VQFT+   AELI
Sbjct: 3    KTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAELI 62

Query: 1362 ISLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRA 1183
            ISLANQ   RLWYG  YLKAR  ++DIV KPRT+M ++E  ++ FGCQ+S EKF VLW  
Sbjct: 63   ISLANQ---RLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVLWEG 119

Query: 1182 RDATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRI 1003
                V FG+G+RK+ FHL +  V+Y+LELSYE IWQI   CPR Q+ KYLLIQL GAPRI
Sbjct: 120  NVDLVTFGIGMRKMNFHLKYKSVEYRLELSYEIIWQIQLHCPRDQSMKYLLIQLSGAPRI 179

Query: 1002 FEK--RDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFG 829
            ++K   +SG I+++    F+ +  DDQWVR TDFTSS  IGQSS+LCL+LP GR+LP F 
Sbjct: 180  YKKVAPNSGQIFDNPLLNFFKEASDDQWVRTTDFTSSCSIGQSSSLCLKLPNGRQLPPFK 239

Query: 828  ESFADFEAKDGKFSL-ESGSTFSKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGP 652
            ++FA +E  + +F L +  + FS   DL PI+   +  VLPY+ILFK++ LVQYGC+  P
Sbjct: 240  QNFAYYEEFEHEFRLIDEDANFSFCRDLAPIVDS-RSHVLPYKILFKINALVQYGCIPWP 298

Query: 651  TLDVSFFRLVDPA-KIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPA 475
             LD SF+RLV+      I  +E+ALEKL+HLK C YDP  +L +QYRKY  S  PP +P 
Sbjct: 299  LLDASFYRLVERIITTRIEFVEHALEKLFHLKECNYDPSNFLTEQYRKY--SRHPPNSPV 356

Query: 474  ISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYST 295
            ISLD GLVYVRRVQITP KV+F GPE+NVSNRVLR++  +IDNF+R+SF+DE+ +K+ ST
Sbjct: 357  ISLDDGLVYVRRVQITPCKVFFCGPEVNVSNRVLRHFSQYIDNFLRVSFVDEEWDKMRST 416

Query: 294  DLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGL 115
            DL PR +S   D +T I+RRILS+L+NGIVIG K F+FLAFSSSQLR+NS WMFAS   +
Sbjct: 417  DLLPRMSSKSEDGKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDI 476

Query: 114  NASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
            +A+ IR WMG+FR I+N AKYAARLGQSFGSS E LSV
Sbjct: 477  DAAYIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSV 514


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score =  570 bits (1470), Expect = e-160
 Identities = 295/515 (57%), Positives = 384/515 (74%), Gaps = 2/515 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAFVVQFTTIEDAELII 1360
            KTI+VYGFP  +S E+VK FLE+ TG  TV A++ K  +  SR    VQF     A+ II
Sbjct: 3    KTIQVYGFPYLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADKII 62

Query: 1359 SLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRAR 1180
            +LA++   RL++G  YLKA +M  DIVQ  R +++ ++   ++FGCQIS +KF+VL  + 
Sbjct: 63   NLASK---RLYFGSSYLKAWEMKTDIVQL-RAYVDHMDGITLNFGCQISDDKFAVLG-ST 117

Query: 1179 DATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRIF 1000
            + ++KFG+GL+K +F LS    DYKL+LSYENIWQ+    P GQ A++LLIQL+GAPRI+
Sbjct: 118  EVSIKFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIY 177

Query: 999  EKRDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFGESF 820
            ++       E+  ++F+ + PDDQWVR TDF  S+ IG SS+LCL+  +G  LP+F ESF
Sbjct: 178  KR------LENSCYSFFKETPDDQWVRTTDFAPSW-IGLSSSLCLQFRRGVHLPNFQESF 230

Query: 819  ADFEAKDGKFSLESGSTF--SKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPTL 646
              +  ++   +L++G TF  S+   LVP + PP+G+ +PY+ILFK+S LVQ+GC+ GP L
Sbjct: 231  FHYTERENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPAL 290

Query: 645  DVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAISL 466
            +V FFRLVDP + ++ACIE ALEKLY+LK CCYDPV+WL +QY  YL   QPPK+P+I+L
Sbjct: 291  NVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITL 350

Query: 465  DAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTDLS 286
            D GLVYVRRV +TP KVYF GPE+NVSNRVLRNY + IDNF+R+SF+DE+ EKLYSTDL 
Sbjct: 351  DDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTDLL 410

Query: 285  PRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLNAS 106
            P+ ++ +G  RT I+ RILS LR G VIG KKFEFLAFSSSQLR+NS WMFAS  GL A+
Sbjct: 411  PKASTGNG-IRTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTAN 469

Query: 105  VIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
             IR WMG+F QI+NVAKYAARLGQSFGSSKETLSV
Sbjct: 470  DIRTWMGDFSQIKNVAKYAARLGQSFGSSKETLSV 504


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  570 bits (1469), Expect = e-159
 Identities = 291/515 (56%), Positives = 387/515 (75%), Gaps = 2/515 (0%)
 Frame = -3

Query: 1539 KTIEVYGFPSHVSQELVKVFLEQKTGKETVRAIKFKNIQNTSRRAFVVQFTTIEDAELII 1360
            KTI+V+GFP+ +S E+VK+FLE+ TG  T+ A++ K  +  SR    VQF     A+ II
Sbjct: 3    KTIQVFGFPNLLSAEVVKLFLEKHTGYGTICALEVKQSKGGSRAFAKVQFVDNISADKII 62

Query: 1359 SLANQQIERLWYGRHYLKARKMDLDIVQKPRTFMNSIEHTIIHFGCQISKEKFSVLWRAR 1180
            +LA++   RL++G  YLKA +M  DIVQ  R +++ ++   ++FGCQIS++KF+VL  + 
Sbjct: 63   NLASK---RLYFGSSYLKAWEMKTDIVQL-RAYVDHMDGITLNFGCQISEDKFAVLG-ST 117

Query: 1179 DATVKFGLGLRKLYFHLSHDHVDYKLELSYENIWQIHYRCPRGQTAKYLLIQLYGAPRIF 1000
            + ++KFG+GL+K +F LS    DYKL+LSYENIWQ+    P GQ A++LLIQL+GAPRI+
Sbjct: 118  EVSIKFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIY 177

Query: 999  EKRDSGNIYEDYAFTFYLDPPDDQWVRATDFTSSYCIGQSSALCLELPQGRELPDFGESF 820
            ++       E+  ++F+ + PDDQWVR TDFT S+ IG SS+LCL+  +G  LP+F ESF
Sbjct: 178  KR------LENSCYSFFKETPDDQWVRTTDFTPSW-IGLSSSLCLQFRRGVHLPNFQESF 230

Query: 819  ADFEAKDGKFSLESGSTF--SKNLDLVPIIGPPQGVVLPYEILFKVSCLVQYGCLSGPTL 646
              +  ++   +L++G TF  S+   LVP + PP+G+ +PY+ILFK+S LVQ+GC+ GP L
Sbjct: 231  FHYAERENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPAL 290

Query: 645  DVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKWLNDQYRKYLTSDQPPKAPAISL 466
            +V FFRLVDP + ++ACIE ALEKLY+LK CCYDPV+WL +QY  YL   QPPK+P+I+L
Sbjct: 291  NVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITL 350

Query: 465  DAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHIDNFIRISFIDEDLEKLYSTDLS 286
            D GLVYVRRV +TP KVYF GPE+NVSNRVLRNY + IDNF+R+SF+DE+ EKLYST+L 
Sbjct: 351  DDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTELL 410

Query: 285  PRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAFSSSQLRENSAWMFASSLGLNAS 106
            P+ ++ +G  RT I+ RILS LR G VIG KKFEFLAFSSSQLR+NS WMFAS  GL  +
Sbjct: 411  PKASTGNG-IRTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRRGLTTN 469

Query: 105  VIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 1
             IR WMG+F QI+NVAKYAARLGQSFGSS+ETLSV
Sbjct: 470  DIRSWMGDFSQIKNVAKYAARLGQSFGSSRETLSV 504