BLASTX nr result
ID: Paeonia24_contig00041753
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00041753
(280 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007205331.1| hypothetical protein PRUPE_ppa006992mg [Prun... 60 3e-10
gb|EXC10718.1| Transcription initiation factor IIA large subunit... 60 4e-10
ref|XP_006584213.1| PREDICTED: TFIIA-alpha and beta-like factor-... 64 3e-09
ref|XP_004143132.1| PREDICTED: transcription initiation factor I... 61 3e-09
ref|XP_003537974.1| PREDICTED: transcription initiation factor I... 61 4e-09
ref|XP_003539601.1| PREDICTED: transcription initiation factor I... 61 4e-09
ref|XP_007016334.1| Transcription initiation factor IIA subunit ... 59 1e-08
ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citr... 65 1e-08
ref|XP_004486980.1| PREDICTED: transcription initiation factor I... 61 3e-08
ref|XP_006379027.1| hypothetical protein POPTR_0009s04150g [Popu... 63 5e-08
ref|XP_006846335.1| hypothetical protein AMTR_s00012p00256620 [A... 56 6e-08
emb|CAN83895.1| hypothetical protein VITISV_039114 [Vitis vinifera] 55 1e-07
ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241... 55 1e-07
ref|XP_003547006.1| PREDICTED: transcription initiation factor I... 60 1e-07
ref|XP_002520518.1| protein with unknown function [Ricinus commu... 50 2e-07
ref|XP_006350788.1| PREDICTED: transcription initiation factor I... 61 2e-07
ref|XP_004241212.1| PREDICTED: transcription initiation factor I... 61 2e-07
ref|XP_006595034.1| PREDICTED: transcription initiation factor I... 59 2e-07
ref|XP_003543527.1| PREDICTED: transcription initiation factor I... 59 2e-07
ref|XP_006369541.1| hypothetical protein POPTR_0001s25120g [Popu... 55 3e-07
>ref|XP_007205331.1| hypothetical protein PRUPE_ppa006992mg [Prunus persica]
gi|462400973|gb|EMJ06530.1| hypothetical protein
PRUPE_ppa006992mg [Prunus persica]
Length = 386
Score = 60.1 bits (144), Expect(2) = 3e-10
Identities = 37/70 (52%), Positives = 43/70 (61%)
Frame = +3
Query: 3 TTGSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ*TPIQTHLPRDQTLLPGINPIQTLR 182
T GS I VHDLN+PYEG EEYETP AE+LF TP+QT + QT LPG
Sbjct: 64 TPGSAITPVHDLNVPYEGTEEYETPTAEILFPP---TPLQTPI---QTPLPG-------- 109
Query: 183 TVDNLLDLVT 212
T DNL ++ T
Sbjct: 110 TGDNLYNIPT 119
Score = 30.0 bits (66), Expect(2) = 3e-10
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 241 TELKSGRPSPYMQ 279
TELK+GRPSPYMQ
Sbjct: 140 TELKAGRPSPYMQ 152
>gb|EXC10718.1| Transcription initiation factor IIA large subunit [Morus notabilis]
Length = 404
Score = 60.5 bits (145), Expect(2) = 4e-10
Identities = 33/61 (54%), Positives = 39/61 (63%)
Frame = +3
Query: 3 TTGSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ*TPIQTHLPRDQTLLPGINPIQTLR 182
T G PI VHDLN+PYEG EEYETP A++LF TP+QT + QT LPG I +
Sbjct: 64 TPGGPITPVHDLNVPYEGTEEYETPTADMLFPP---TPLQTPI---QTPLPGTADIYNIP 117
Query: 183 T 185
T
Sbjct: 118 T 118
Score = 29.3 bits (64), Expect(2) = 4e-10
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 235 GATELKSGRPSPYMQ 279
G T++K GRPSPYMQ
Sbjct: 142 GNTDMKGGRPSPYMQ 156
>ref|XP_006584213.1| PREDICTED: TFIIA-alpha and beta-like factor-like [Glycine max]
Length = 154
Score = 63.5 bits (153), Expect(2) = 3e-09
Identities = 38/64 (59%), Positives = 41/64 (64%)
Frame = +3
Query: 3 TTGSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ*TPIQTHLPRDQTLLPGINPIQTLR 182
T G PI VHDLN+PYEG EEYETP AE+LF L TP+QT L QT LPG
Sbjct: 66 TPGGPITPVHDLNMPYEGTEEYETPTAEMLFPL---TPLQTPL---QTPLPG-------- 111
Query: 183 TVDN 194
TVDN
Sbjct: 112 TVDN 115
Score = 23.5 bits (49), Expect(2) = 3e-09
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 244 ELKSGRPSPYM 276
E+K GRP PYM
Sbjct: 139 EIKGGRPGPYM 149
>ref|XP_004143132.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Cucumis sativus] gi|449496658|ref|XP_004160191.1|
PREDICTED: transcription initiation factor IIA large
subunit-like [Cucumis sativus]
Length = 402
Score = 60.8 bits (146), Expect(2) = 3e-09
Identities = 31/45 (68%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +3
Query: 3 TTGSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ-*TPIQTHLP 134
T G PI VHDLN+PYEG EEYETP A+LLF T TPIQT LP
Sbjct: 64 TPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLP 108
Score = 25.8 bits (55), Expect(2) = 3e-09
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +1
Query: 244 ELKSGRPSPYMQ 279
E++SGRP+PYMQ
Sbjct: 148 EVRSGRPTPYMQ 159
>ref|XP_003537974.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoform X1 [Glycine max]
Length = 392
Score = 60.8 bits (146), Expect(2) = 4e-09
Identities = 37/64 (57%), Positives = 40/64 (62%)
Frame = +3
Query: 3 TTGSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ*TPIQTHLPRDQTLLPGINPIQTLR 182
T G PI VHDLN+PYEG EEYETP AE+LF TP+QT L QT LPG
Sbjct: 66 TPGGPITPVHDLNMPYEGTEEYETPTAEMLFPP---TPLQTPL---QTPLPG-------- 111
Query: 183 TVDN 194
TVDN
Sbjct: 112 TVDN 115
Score = 25.4 bits (54), Expect(2) = 4e-09
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 244 ELKSGRPSPYMQ 279
E+K GRP PYMQ
Sbjct: 139 EIKGGRPGPYMQ 150
>ref|XP_003539601.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoformX2 [Glycine max]
Length = 389
Score = 60.8 bits (146), Expect(2) = 4e-09
Identities = 37/64 (57%), Positives = 40/64 (62%)
Frame = +3
Query: 3 TTGSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ*TPIQTHLPRDQTLLPGINPIQTLR 182
T G PI VHDLN+PYEG EEYETP AE+LF TP+QT L QT LPG
Sbjct: 66 TPGGPITPVHDLNMPYEGTEEYETPTAEMLFPP---TPLQTPL---QTPLPG-------- 111
Query: 183 TVDN 194
TVDN
Sbjct: 112 TVDN 115
Score = 25.4 bits (54), Expect(2) = 4e-09
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 244 ELKSGRPSPYMQ 279
E+K GRP PYMQ
Sbjct: 139 EIKGGRPGPYMQ 150
>ref|XP_007016334.1| Transcription initiation factor IIA subunit 1 [Theobroma cacao]
gi|508786697|gb|EOY33953.1| Transcription initiation
factor IIA subunit 1 [Theobroma cacao]
Length = 393
Score = 58.9 bits (141), Expect(2) = 1e-08
Identities = 31/52 (59%), Positives = 36/52 (69%)
Frame = +3
Query: 3 TTGSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ*TPIQTHLPRDQTLLPG 158
T G PI VHDLN+PYEG EEYETP A++LF TP+QT +P T LPG
Sbjct: 67 TPGGPITPVHDLNVPYEGPEEYETPTADMLFPP---TPLQTPVP---TPLPG 112
Score = 25.8 bits (55), Expect(2) = 1e-08
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 235 GATELKSGRPSPYMQ 279
G T+ K RPSPYMQ
Sbjct: 137 GNTDAKGARPSPYMQ 151
>ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citrus clementina]
gi|568870376|ref|XP_006488381.1| PREDICTED:
transcription initiation factor IIA subunit 1-like
[Citrus sinensis] gi|557526833|gb|ESR38139.1|
hypothetical protein CICLE_v10028561mg [Citrus
clementina]
Length = 406
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/55 (63%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +3
Query: 9 GSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ-*TPIQTHLPRDQTLLPGINPI 170
G PI VHDLN+PYEG EEYETP AE+LF T TPIQT LP T LPG P+
Sbjct: 65 GGPITPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPIQTPLP-GSTPLPGSTPL 118
>ref|XP_004486980.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Cicer arietinum]
Length = 389
Score = 61.2 bits (147), Expect(2) = 3e-08
Identities = 31/45 (68%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +3
Query: 3 TTGSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ-*TPIQTHLP 134
T G PI VHDLN+PYEG EEYETP AE+LF T TPIQT LP
Sbjct: 67 TPGGPITPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPIQTPLP 111
Score = 22.3 bits (46), Expect(2) = 3e-08
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 235 GATELKSGRPSPYMQ 279
G ++K GRP YMQ
Sbjct: 138 GNADVKGGRPGTYMQ 152
>ref|XP_006379027.1| hypothetical protein POPTR_0009s04150g [Populus trichocarpa]
gi|550330998|gb|ERP56824.1| hypothetical protein
POPTR_0009s04150g [Populus trichocarpa]
Length = 303
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/52 (65%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Frame = +3
Query: 9 GSPIAHVHDLNIPYEGMEEYETPIAELLFSLT-Q*TPIQTHLPRD-QTLLPG 158
G PI VHDLN+PYEG EEYETP AE+LF T TP+QT LP QT LPG
Sbjct: 70 GGPITPVHDLNVPYEGTEEYETPTAEILFPPTPMQTPMQTPLPGSAQTPLPG 121
>ref|XP_006846335.1| hypothetical protein AMTR_s00012p00256620 [Amborella trichopoda]
gi|548849105|gb|ERN08010.1| hypothetical protein
AMTR_s00012p00256620 [Amborella trichopoda]
Length = 232
Score = 56.2 bits (134), Expect(3) = 6e-08
Identities = 28/41 (68%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +3
Query: 15 PIAHVHDLNIPYEGMEEYETPIAELLFSLTQ-*TPIQTHLP 134
PI VHDLN+PYEG EEY+TP AE+LF T TPIQT LP
Sbjct: 67 PITPVHDLNVPYEGSEEYQTPTAEMLFPPTPLQTPIQTPLP 107
Score = 23.1 bits (48), Expect(3) = 6e-08
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 244 ELKSGRPSPYMQ 279
++K RPSPYMQ
Sbjct: 136 DVKGARPSPYMQ 147
Score = 22.3 bits (46), Expect(3) = 6e-08
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 200 GSSDYTSIHDTG 235
GS DY +HDTG
Sbjct: 121 GSGDYGPMHDTG 132
>emb|CAN83895.1| hypothetical protein VITISV_039114 [Vitis vinifera]
Length = 630
Score = 55.5 bits (132), Expect(2) = 1e-07
Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +3
Query: 12 SPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ-*TPIQTHLP 134
+P VHDLN+PYEG EEYETP AE+LF T TPIQT LP
Sbjct: 72 APTPPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPIQTPLP 113
Score = 26.2 bits (56), Expect(2) = 1e-07
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 235 GATELKSGRPSPYM 276
GAT++KSGRP YM
Sbjct: 138 GATDMKSGRPPSYM 151
>ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241598 [Vitis vinifera]
gi|297746029|emb|CBI16085.3| unnamed protein product
[Vitis vinifera]
Length = 393
Score = 55.5 bits (132), Expect(2) = 1e-07
Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +3
Query: 12 SPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ-*TPIQTHLP 134
+P VHDLN+PYEG EEYETP AE+LF T TPIQT LP
Sbjct: 72 APTPPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPIQTPLP 113
Score = 26.2 bits (56), Expect(2) = 1e-07
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 235 GATELKSGRPSPYM 276
GAT++KSGRP YM
Sbjct: 138 GATDMKSGRPPSYM 151
>ref|XP_003547006.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Glycine max]
Length = 390
Score = 60.1 bits (144), Expect(2) = 1e-07
Identities = 30/45 (66%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +3
Query: 3 TTGSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ-*TPIQTHLP 134
T G PI VHDLN+PYEG EEYETP A++LF T TPIQT LP
Sbjct: 66 TPGGPITPVHDLNVPYEGTEEYETPTADMLFPPTPLQTPIQTPLP 110
Score = 21.6 bits (44), Expect(2) = 1e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 235 GATELKSGRPSPYMQ 279
G + K RP+PYMQ
Sbjct: 136 GNADGKGARPAPYMQ 150
>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
gi|223540360|gb|EEF41931.1| protein with unknown
function [Ricinus communis]
Length = 383
Score = 50.1 bits (118), Expect(2) = 2e-07
Identities = 29/51 (56%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 9 GSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ*TPIQTHLP-RDQTLLPG 158
G I VHDLN+PYEG EEYETP AE+LF T LP QT LPG
Sbjct: 69 GGVITPVHDLNVPYEGTEEYETPTAEILFP-------PTPLPGTAQTPLPG 112
Score = 30.8 bits (68), Expect(2) = 2e-07
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 235 GATELKSGRPSPYMQ 279
G+TE K+GRPSPYMQ
Sbjct: 139 GSTEAKAGRPSPYMQ 153
>ref|XP_006350788.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Solanum tuberosum]
Length = 403
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 3 TTGSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ*TPIQTHLP-RDQTLLPG 158
T G PI VHDLN+PYEG EEYETP A++LF TP+QT LP QT LPG
Sbjct: 66 TPGGPITPVHDLNMPYEGNEEYETPTADILFPP---TPLQTPLPGTAQTPLPG 115
>ref|XP_004241212.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Solanum lycopersicum]
Length = 401
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 3 TTGSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ*TPIQTHLP-RDQTLLPG 158
T G PI VHDLN+PYEG EEYETP A++LF TP+QT LP QT LPG
Sbjct: 66 TPGGPITPVHDLNMPYEGNEEYETPTADILFPP---TPLQTPLPGTAQTPLPG 115
>ref|XP_006595034.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoform X2 [Glycine max]
Length = 409
Score = 58.9 bits (141), Expect(2) = 2e-07
Identities = 29/45 (64%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +3
Query: 3 TTGSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ-*TPIQTHLP 134
T G PI VHDLN+PYEG +EYETP A++LF T TPIQT LP
Sbjct: 66 TPGGPITPVHDLNVPYEGTDEYETPTADMLFPPTPLQTPIQTPLP 110
Score = 21.6 bits (44), Expect(2) = 2e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 235 GATELKSGRPSPYMQ 279
G + K RP+PYMQ
Sbjct: 136 GNADGKGARPAPYMQ 150
>ref|XP_003543527.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoformX1 [Glycine max]
Length = 391
Score = 58.9 bits (141), Expect(2) = 2e-07
Identities = 29/45 (64%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +3
Query: 3 TTGSPIAHVHDLNIPYEGMEEYETPIAELLFSLTQ-*TPIQTHLP 134
T G PI VHDLN+PYEG +EYETP A++LF T TPIQT LP
Sbjct: 66 TPGGPITPVHDLNVPYEGTDEYETPTADMLFPPTPLQTPIQTPLP 110
Score = 21.6 bits (44), Expect(2) = 2e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 235 GATELKSGRPSPYMQ 279
G + K RP+PYMQ
Sbjct: 136 GNADGKGARPAPYMQ 150
>ref|XP_006369541.1| hypothetical protein POPTR_0001s25120g [Populus trichocarpa]
gi|550348133|gb|ERP66110.1| hypothetical protein
POPTR_0001s25120g [Populus trichocarpa]
Length = 455
Score = 54.7 bits (130), Expect(2) = 3e-07
Identities = 33/58 (56%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +3
Query: 27 VHDLNIPYEGMEEYETPIAELLFSLTQ*T-PIQTHLPRD-QTLLPGINPIQTLRTVDN 194
VHDLN+PYEG EEYETP AE+LF T QT LP + QT LPG P +VDN
Sbjct: 74 VHDLNVPYEGTEEYETPTAEILFPPTPLPGSAQTPLPGNVQTPLPGNVPTPLPGSVDN 131
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +1
Query: 235 GATELKSGRPSPYMQ 279
G+T++K+GRPS +MQ
Sbjct: 154 GSTDVKAGRPSHFMQ 168