BLASTX nr result

ID: Paeonia24_contig00041389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00041389
         (283 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_006490750.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
gb|EXB25868.1| hypothetical protein L484_012294 [Morus notabilis...    65   1e-08
ref|XP_002534168.1| pentatricopeptide repeat-containing protein,...    63   5e-08
ref|XP_003524346.2| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06
ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06

>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 42/72 (58%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
 Frame = -1

Query: 211 AMRGNNWVRQLHSR-CHLSVQGEPI--NKFQTTNTKMPLSKTTTDADIVKWNMAITAHMR 41
           AMRG+N  RQLHSR C  S+Q       K  T N     S   TDADIVKWN+AIT HMR
Sbjct: 2   AMRGSNRFRQLHSRSCLRSLQTTTTANRKPSTRNQPKTTSSLATDADIVKWNIAITNHMR 61

Query: 40  NGQCESALNVFN 5
           NGQC+SAL +FN
Sbjct: 62  NGQCDSALRLFN 73


>ref|XP_006490750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Citrus sinensis]
          Length = 778

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 17/85 (20%)
 Frame = -1

Query: 208 MRGNNWVRQLHSRCHLSVQGEPINKFQT-TNTKMPLSKTTT----------------DAD 80
           MRGNN +RQLHS C L    + IN+ Q+  NT    SK T                 D D
Sbjct: 1   MRGNNRLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWD 60

Query: 79  IVKWNMAITAHMRNGQCESALNVFN 5
           I +WN+AIT HMRNG C+SAL+VFN
Sbjct: 61  IRQWNVAITTHMRNGCCDSALHVFN 85


>gb|EXB25868.1| hypothetical protein L484_012294 [Morus notabilis]
           gi|587990941|gb|EXC75162.1| hypothetical protein
           L484_000356 [Morus notabilis]
          Length = 773

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 12/80 (15%)
 Frame = -1

Query: 208 MRGNNWVRQLHSRCHLSVQGEPINK------------FQTTNTKMPLSKTTTDADIVKWN 65
           MRG++  RQ HS C  S+Q + IN              +  N K        D+DIV+WN
Sbjct: 1   MRGSHRFRQFHSSCFCSLQTQTINGKLPNPIPSKKTLIEKHNPKKNKKSNIADSDIVQWN 60

Query: 64  MAITAHMRNGQCESALNVFN 5
           M IT+HMRNG C++AL VFN
Sbjct: 61  MDITSHMRNGHCKAALRVFN 80


>ref|XP_002534168.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525755|gb|EEF28217.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 513

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 39/74 (52%), Positives = 42/74 (56%), Gaps = 13/74 (17%)
 Frame = -1

Query: 187 RQLHSRCHL------SVQGE-----PINKFQTTNTKMPL--SKTTTDADIVKWNMAITAH 47
           RQLHS C        SV+G      P  K  T   K     S+ TTD+DIV WNMAIT H
Sbjct: 8   RQLHSSCRRTQKIQQSVKGTNRTPYPSKKELTQKFKQSKNESEKTTDSDIVNWNMAITTH 67

Query: 46  MRNGQCESALNVFN 5
           MRNGQC SAL VFN
Sbjct: 68  MRNGQCHSALQVFN 81


>ref|XP_003524346.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 769

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/62 (48%), Positives = 39/62 (62%)
 Frame = -1

Query: 190 VRQLHSRCHLSVQGEPINKFQTTNTKMPLSKTTTDADIVKWNMAITAHMRNGQCESALNV 11
           +R  +SRC L       +K ++TN+  P S    D DIV WN AI++HMRNG C+SAL V
Sbjct: 16  LRMRNSRC-LCTNNYYRSKRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRV 74

Query: 10  FN 5
           FN
Sbjct: 75  FN 76


>ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 14/66 (21%)
 Frame = -1

Query: 160 SVQGEPI-NKFQTTNTKMPLSKTTT-------------DADIVKWNMAITAHMRNGQCES 23
           S+Q E I NK + ++T  P  KT T             D+DIVKWN  I+A+MR GQCES
Sbjct: 19  SIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSDIVKWNRKISAYMRKGQCES 78

Query: 22  ALNVFN 5
           AL+VFN
Sbjct: 79  ALSVFN 84


>ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 14/66 (21%)
 Frame = -1

Query: 160 SVQGEPI-NKFQTTNTKMPLSKTTT-------------DADIVKWNMAITAHMRNGQCES 23
           S+Q E I NK + ++T  P  KT T             D+DIVKWN  I+A+MR GQCES
Sbjct: 19  SIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSDIVKWNRKISAYMRKGQCES 78

Query: 22  ALNVFN 5
           AL+VFN
Sbjct: 79  ALSVFN 84


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