BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00041074
         (398 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containi...   160   2e-37
ref|XP_007036202.1| Tetratricopeptide repeat-like superfamily pr...   151   8e-35
ref|XP_006439810.1| hypothetical protein CICLE_v10018848mg [Citr...   149   5e-34
gb|EXC12968.1| hypothetical protein L484_016898 [Morus notabilis]     142   6e-32
ref|XP_002318647.2| hypothetical protein POPTR_0012s08170g [Popu...   139   3e-31
ref|XP_004300898.1| PREDICTED: pentatricopeptide repeat-containi...   136   3e-30
ref|XP_007210984.1| hypothetical protein PRUPE_ppa021532mg [Prun...    91   2e-16
ref|XP_002322051.2| pentatricopeptide repeat-containing family p...    90   3e-16
gb|EXB74342.1| hypothetical protein L484_001551 [Morus notabilis]      88   1e-15
gb|EXB53967.1| hypothetical protein L484_022935 [Morus notabilis]      88   1e-15
gb|EXB52480.1| hypothetical protein L484_000681 [Morus notabilis]      88   1e-15
ref|NP_195239.1| pentatricopeptide repeat-containing protein [Ar...    86   7e-15
ref|XP_006412144.1| hypothetical protein EUTSA_v10024444mg [Eutr...    85   1e-14
ref|XP_006842799.1| hypothetical protein AMTR_s00081p00019740 [A...    85   1e-14
ref|XP_004244817.1| PREDICTED: pentatricopeptide repeat-containi...    85   1e-14
gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sati...    85   1e-14
ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group] g...    85   1e-14
gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japo...    85   1e-14
gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indi...    85   1e-14
gb|AAL79803.1|AC079874_26 putative pentatricopeptide repeat doma...    85   1e-14

>ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  160 bits (405), Expect = 2e-37
 Identities = 78/118 (66%), Positives = 93/118 (78%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           +MLD G+ VE+F++FP LIKAFGGL D+   RQIHGHVLKLGVLDD+ V+NSLL MYWKC
Sbjct: 98  KMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKC 157

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTREFGIGLSRVTCI 355
           G  EDA+ +FE M E DLVSWNTM+SGFQ+SM +  SLMFF  M  EFGI  +RV C+
Sbjct: 158 GVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACV 215



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
 Frame = +2

Query: 56  IKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERD- 232
           I +   L+ +   R+IHG V+K G+  + Y+++SL+ MY KCG+ ++A  IF ++ ++D 
Sbjct: 218 ILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDS 277

Query: 233 ----LVSWNTMLSGFQQSMFHIGSLMFFSRM 313
                V WN M+SG+  +     +L+ F +M
Sbjct: 278 VRRNAVIWNVMISGYVSNGCFSQALLLFIKM 308


>ref|XP_007036202.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
           gi|508773447|gb|EOY20703.1| Tetratricopeptide
           repeat-like superfamily protein [Theobroma cacao]
          Length = 815

 Score =  151 bits (382), Expect = 8e-35
 Identities = 71/117 (60%), Positives = 90/117 (76%)
 Frame = +2

Query: 5   MLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCG 184
           ML  G  V+ F+FFP LIKAFGG+ D+K SRQIHGHVLKLG L D+YV+N+LLGMYWKCG
Sbjct: 98  MLQNGFQVQDFKFFPCLIKAFGGVSDVKRSRQIHGHVLKLGFLADVYVVNALLGMYWKCG 157

Query: 185 AAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTREFGIGLSRVTCI 355
             +DA+ +F+ M ERD VSWN+M+SGF QS  ++ SLM FS M +E G+  +RV C+
Sbjct: 158 EIKDAVKMFDKMSERDFVSWNSMISGFCQSEDYLDSLMIFSLMVKEHGMFPNRVGCL 214



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/99 (36%), Positives = 54/99 (54%)
 Frame = +2

Query: 53  LIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERD 232
           +++A   L       +IH   +K G + D+YV ++L+ MY KC   E A  +F  +  RD
Sbjct: 423 VLRACSSLALKSKGMEIHCLAVKTGSVSDLYVASALVDMYGKCRDIESAQNVFSRLHLRD 482

Query: 233 LVSWNTMLSGFQQSMFHIGSLMFFSRMTREFGIGLSRVT 349
           LVSWN ++SGF Q+ +   +L  F  M  E GI  + VT
Sbjct: 483 LVSWNALISGFSQNEWADEALAAFRDMQCE-GIRPNSVT 520


>ref|XP_006439810.1| hypothetical protein CICLE_v10018848mg [Citrus clementina]
           gi|557542072|gb|ESR53050.1| hypothetical protein
           CICLE_v10018848mg [Citrus clementina]
          Length = 841

 Score =  149 bits (375), Expect = 5e-34
 Identities = 71/117 (60%), Positives = 87/117 (74%)
 Frame = +2

Query: 5   MLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCG 184
           ML+YG   ++F+FFP LIKAFGGL D + +RQIHGHVLKLG   D+YV NS+LGMYWKCG
Sbjct: 114 MLEYGFPFDEFRFFPCLIKAFGGLCDAEKARQIHGHVLKLGFFYDVYVQNSILGMYWKCG 173

Query: 185 AAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTREFGIGLSRVTCI 355
              DAI +FE M  RDLVSWNTM+SGF Q   + GSLM F RM  + G+  +RV+C+
Sbjct: 174 GVGDAIKLFEKMFGRDLVSWNTMMSGFCQLGDYFGSLMIFRRMIDDHGVYPNRVSCL 230


>gb|EXC12968.1| hypothetical protein L484_016898 [Morus notabilis]
          Length = 852

 Score =  142 bits (357), Expect = 6e-32
 Identities = 67/118 (56%), Positives = 91/118 (77%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           +ML+ G  +++F+FFP LIKAFG + D++  R+IH H++KLGVLDDIYV NSLLG+YWKC
Sbjct: 103 KMLECGFPLDEFRFFPVLIKAFGVISDVEKVREIHVHLVKLGVLDDIYVANSLLGVYWKC 162

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTREFGIGLSRVTCI 355
           G A DAI +F  M ++D VSWNTM+SGF +S  ++GSL  FS+M RE G+  +RV C+
Sbjct: 163 GEARDAIQLFWKMPKKDSVSWNTMISGFCRSGDYMGSLRMFSQMIREHGVLPNRVACL 220



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/91 (34%), Positives = 49/91 (53%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EML+ G+  E       L+    GL D+ + +QIHG  +  G+  D+ V  +L+ MY+KC
Sbjct: 313 EMLESGILPESSTMVAVLVLC-SGLLDLAVGKQIHGFAISHGLDKDVRVETALIDMYFKC 371

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQS 274
           G A+  + IF+    R++V W   +S   QS
Sbjct: 372 GYAKAGLDIFKTSLNRNIVMWGAAISNCAQS 402



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 23/59 (38%), Positives = 39/59 (66%)
 Frame = +2

Query: 98  QIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERDLVSWNTMLSGFQQS 274
           +IHG V+K G   D+++  +L+ MY KC   E A  +F  + +RDL++WN ++SG+ Q+
Sbjct: 445 EIHGLVVKSGFGSDVFIGGALVDMYAKCRDIESAEKVFYRLLDRDLITWNALISGYAQN 503


>ref|XP_002318647.2| hypothetical protein POPTR_0012s08170g [Populus trichocarpa]
           gi|550326639|gb|EEE96867.2| hypothetical protein
           POPTR_0012s08170g [Populus trichocarpa]
          Length = 744

 Score =  139 bits (351), Expect = 3e-31
 Identities = 68/119 (57%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           + ++ G  VE+F+FFP LIKAFGGL D+   +QIHGH+LK G L DI+V NSLLGMYWKC
Sbjct: 28  DFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKC 87

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTREFGIGL-SRVTCI 355
           GA  +A+ +FE M ERD VSWNTM+SGF QS  ++ SL+ F RM +E G    +RV C+
Sbjct: 88  GAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACL 146



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/109 (33%), Positives = 60/109 (55%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EML+ G+S +       L+     L D+ + +QIHG +L LG+ DD+ V  +L+ MY+KC
Sbjct: 238 EMLELGISPDSSTVVVVLVLC-SQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKC 296

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTREFG 328
           G  E ++ IF+     +LV W +++    Q+ +   +L FFS    + G
Sbjct: 297 GDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCG 345



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/58 (44%), Positives = 37/58 (63%)
 Frame = +2

Query: 101 IHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERDLVSWNTMLSGFQQS 274
           IHG  +K+G   D++V  +L+  Y KCG  E A  +F  +  RDLVSWN ++SGF Q+
Sbjct: 371 IHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQN 428


>ref|XP_004300898.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 453

 Score =  136 bits (343), Expect = 3e-30
 Identities = 66/118 (55%), Positives = 86/118 (72%), Gaps = 1/118 (0%)
 Frame = +2

Query: 5   MLDYGLSV-EQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           +L+ GL V E+FQFFP LIKAFGG  D+  +R++HGHVLKLGVL D+Y  NS+LG+YWKC
Sbjct: 97  LLELGLPVAEEFQFFPILIKAFGGFCDVGKAREVHGHVLKLGVLGDVYDANSILGVYWKC 156

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTREFGIGLSRVTCI 355
           G+ EDA+ +F  M ERDLVSWNTM+SGF     ++  L  F RM R+  +  +RV C+
Sbjct: 157 GSVEDAVQLFAKMPERDLVSWNTMISGFCHLGDYVRCLEVFRRMVRDHWVLPNRVACL 214


>ref|XP_007210984.1| hypothetical protein PRUPE_ppa021532mg [Prunus persica]
           gi|462406719|gb|EMJ12183.1| hypothetical protein
           PRUPE_ppa021532mg [Prunus persica]
          Length = 840

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 39/79 (49%), Positives = 60/79 (75%)
 Frame = +2

Query: 44  FPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMC 223
           FP LIKA GGL D+ + + IHG  +K+G++ D++V N+L+ MY KCG+ EDA+ +F+ M 
Sbjct: 62  FPCLIKACGGLLDVGLGQVIHGMAVKMGLMSDVFVGNALIAMYGKCGSIEDAVRVFDLMP 121

Query: 224 ERDLVSWNTMLSGFQQSMF 280
           ER+LVSWN+M+ G+ ++ F
Sbjct: 122 ERNLVSWNSMICGYSENGF 140



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/87 (36%), Positives = 48/87 (55%)
 Frame = +2

Query: 53  LIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERD 232
           L+ A   L+ ++  RQIHG VL+ G   D ++  SLL  Y +CG    A  +F+ M  + 
Sbjct: 372 LLLACAHLKLLQHGRQIHGFVLRDGSETDSFIGISLLSFYIQCGKLSSARVLFDRMEAKS 431

Query: 233 LVSWNTMLSGFQQSMFHIGSLMFFSRM 313
            VSWN M++G+ QS     +L  F +M
Sbjct: 432 RVSWNAMITGYTQSGLADEALNLFRQM 458



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/84 (30%), Positives = 49/84 (58%)
 Frame = +2

Query: 71  GLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERDLVSWNT 250
           G  ++ +   IHG  +KLG+  ++ V N+L+ MY KCG   +A  +F+   ++++VSWN+
Sbjct: 174 GKGEVNIGMVIHGVAVKLGLNQELMVNNALMDMYSKCGYLAEAQVLFDKNDKKNVVSWNS 233

Query: 251 MLSGFQQSMFHIGSLMFFSRMTRE 322
           ++ G+ +     G+   F +M  E
Sbjct: 234 IIGGYSREGDVWGTFDLFQKMQME 257


>ref|XP_002322051.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550321866|gb|EEF06178.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 837

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 43/104 (41%), Positives = 68/104 (65%)
 Frame = +2

Query: 44  FPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMC 223
           FP +IKA GG+ D+++   IHG V+K+G++ D++V N+L+GMY KCGA ++A+ +F+ M 
Sbjct: 62  FPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMP 121

Query: 224 ERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTREFGIGLSRVTCI 355
           E +LVSWN+M+  F ++ F   S      M  E G+    VT +
Sbjct: 122 ETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVV 165



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 34/90 (37%), Positives = 53/90 (58%)
 Frame = +2

Query: 53  LIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERD 232
           L+ A   L+ ++  ++IHG+VL+ G+  D +V  SLL  Y  CG A  A  +F+ M +++
Sbjct: 370 LLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKN 429

Query: 233 LVSWNTMLSGFQQSMFHIGSLMFFSRMTRE 322
           LVSWN M+SG+ Q+     SL  F +   E
Sbjct: 430 LVSWNAMISGYSQNGLPYESLALFRKSLSE 459


>gb|EXB74342.1| hypothetical protein L484_001551 [Morus notabilis]
          Length = 751

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 37/76 (48%), Positives = 57/76 (75%)
 Frame = +2

Query: 47  PPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCE 226
           P +IKA  GL D+ + R++HG  +K+ ++ D++V N+L+GMY KCG  EDA+ +FE M E
Sbjct: 201 PCVIKACSGLLDVGLGREVHGMAVKMALVSDVFVGNALVGMYGKCGFLEDAVRVFEKMPE 260

Query: 227 RDLVSWNTMLSGFQQS 274
           R+LVSWN+M+ GF ++
Sbjct: 261 RNLVSWNSMIRGFSEN 276



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/81 (38%), Positives = 48/81 (59%)
 Frame = +2

Query: 80  DIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERDLVSWNTMLS 259
           DI M   IH  V+KLG+ +++ V N+L+ MY KCG   DA+++F     R++V+WN+M+ 
Sbjct: 313 DIDMGIAIHALVVKLGLSEELMVSNALMDMYAKCGYLSDAVFLFGKNNNRNVVTWNSMIG 372

Query: 260 GFQQSMFHIGSLMFFSRMTRE 322
           GF +     G+     RM  E
Sbjct: 373 GFSREGDVSGTFDLLRRMQME 393



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/104 (35%), Positives = 52/104 (50%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EM D GL  + F     L  A   L+ ++  +QIH  VL+ G+  D ++  SL+ +Y  C
Sbjct: 493 EMKDSGLDPDCFSI-GSLFLACAHLKLLRYGKQIHACVLRNGLERDSFIAISLISLYIHC 551

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRM 313
           G    A  +F  M  + LV WNTMLSG+ Q      +L  F  M
Sbjct: 552 GKIFSACELFYRMEGKSLVCWNTMLSGYSQLGLPDEALHLFREM 595



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 23/71 (32%), Positives = 45/71 (63%)
 Frame = +2

Query: 53  LIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERD 232
           + +A   L  +++ +++H   LK  ++DD++V  S+L MY K G  E A  +F+N+ ++D
Sbjct: 610 VFEACSQLSALRLGKELHCFALKANLVDDMFVECSVLDMYAKSGCMEQAQTVFDNLKDKD 669

Query: 233 LVSWNTMLSGF 265
           L  WN +++G+
Sbjct: 670 LALWNVVIAGY 680


>gb|EXB53967.1| hypothetical protein L484_022935 [Morus notabilis]
          Length = 279

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 37/76 (48%), Positives = 57/76 (75%)
 Frame = +2

Query: 47  PPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCE 226
           P +IKA  GL D+ + R++HG  +K+ ++ D++V N+L+GMY KCG  EDA+ +FE M E
Sbjct: 201 PCVIKACSGLLDVGLGREVHGMAVKMALVSDVFVGNALVGMYGKCGFLEDAVRVFEKMPE 260

Query: 227 RDLVSWNTMLSGFQQS 274
           R+LVSWN+M+ GF ++
Sbjct: 261 RNLVSWNSMIRGFSEN 276


>gb|EXB52480.1| hypothetical protein L484_000681 [Morus notabilis]
          Length = 976

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 37/76 (48%), Positives = 57/76 (75%)
 Frame = +2

Query: 47  PPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCE 226
           P +IKA  GL D+ + R++HG  +K+ ++ D++V N+L+GMY KCG  EDA+ +FE M E
Sbjct: 201 PCVIKACSGLLDVGLGREVHGMAVKMALVSDVFVGNALVGMYGKCGFLEDAVRVFEKMPE 260

Query: 227 RDLVSWNTMLSGFQQS 274
           R+LVSWN+M+ GF ++
Sbjct: 261 RNLVSWNSMIRGFSEN 276



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/81 (38%), Positives = 48/81 (59%)
 Frame = +2

Query: 80  DIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERDLVSWNTMLS 259
           DI M   IH  V+KLG+ +++ V N+L+ MY KCG   DA+++F     R++V+WN+M+ 
Sbjct: 313 DIDMGIAIHALVVKLGLSEELMVSNALMDMYAKCGYLSDAVFLFGKNNNRNVVTWNSMIG 372

Query: 260 GFQQSMFHIGSLMFFSRMTRE 322
           GF +     G+     RM  E
Sbjct: 373 GFSREGDVSGTFDLLRRMQME 393



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 37/104 (35%), Positives = 52/104 (50%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EM D GL  + F     L  A   L+ ++  +QIH  VL+ G+  D ++  SL+ +Y  C
Sbjct: 493 EMKDSGLDPDYFSI-GSLFLACAHLKLLQYGKQIHACVLRNGLERDSFIAISLISLYIHC 551

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRM 313
           G    A  +F  M  + LV WNTMLSG+ Q      +L  F  M
Sbjct: 552 GKIFSACELFYRMEGKSLVCWNTMLSGYSQLGLPDEALHLFREM 595


>ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75098809|sp|O49619.1|PP350_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
           gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis
           thaliana] gi|7270464|emb|CAB80230.1| putative protein
           [Arabidopsis thaliana] gi|332661071|gb|AEE86471.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 804

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 43/105 (40%), Positives = 65/105 (61%)
 Frame = +2

Query: 5   MLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCG 184
           M+  G+  + F + P +IK+  G+  ++  ++IH  V+KLG + D+YV NSL+ +Y K G
Sbjct: 121 MVFAGVKADTFTY-PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLG 179

Query: 185 AAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTR 319
            A DA  +FE M ERD+VSWN+M+SG+        SLM F  M +
Sbjct: 180 CAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLK 224


>ref|XP_006412144.1| hypothetical protein EUTSA_v10024444mg [Eutrema salsugineum]
           gi|557113314|gb|ESQ53597.1| hypothetical protein
           EUTSA_v10024444mg [Eutrema salsugineum]
          Length = 804

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 42/105 (40%), Positives = 64/105 (60%)
 Frame = +2

Query: 5   MLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCG 184
           M+  G+  + F + P +IK+  G+  +K  +++H  V+KLG   D+YV NSL+ +Y K G
Sbjct: 120 MVFAGIKADSFTY-PFVIKSVAGISSLKEGKKVHAMVIKLGFYSDVYVCNSLISLYMKLG 178

Query: 185 AAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTR 319
            A DA  +FE M ERD VSWN+M+SG+      + SL+ F  M +
Sbjct: 179 CAWDAEKVFEEMLERDAVSWNSMISGYLALGDGLRSLILFKEMLK 223


>ref|XP_006842799.1| hypothetical protein AMTR_s00081p00019740 [Amborella trichopoda]
           gi|548844955|gb|ERN04474.1| hypothetical protein
           AMTR_s00081p00019740 [Amborella trichopoda]
          Length = 533

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 36/75 (48%), Positives = 54/75 (72%)
 Frame = +2

Query: 47  PPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCE 226
           P +IKAFGG+ D +  +QIH HV+K G   D +V NSL+ MY KCGA + ++ +F+ M E
Sbjct: 116 PRVIKAFGGISDSRKGKQIHAHVVKFGFCVDTFVANSLMAMYTKCGAMDCSLKLFDRMHE 175

Query: 227 RDLVSWNTMLSGFQQ 271
            D++SWNT++ GF++
Sbjct: 176 IDVISWNTLIGGFRR 190



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/83 (33%), Positives = 50/83 (60%)
 Frame = +2

Query: 74  LRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERDLVSWNTM 253
           L D +  R +H H++K  +  D  V  +L+ MY+KCG+ + A+ +F+N   R+LV W  +
Sbjct: 328 LLDFEHGRCVHAHIIKHSLDLDTRVATALIDMYFKCGSIDGALLVFKNAFFRNLVMWGVV 387

Query: 254 LSGFQQSMFHIGSLMFFSRMTRE 322
           + G  ++ +   +L FFS+M +E
Sbjct: 388 IKGCARNAYPYRALDFFSQMRQE 410


>ref|XP_004244817.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Solanum lycopersicum]
          Length = 839

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/107 (38%), Positives = 68/107 (63%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EML+ G+  + F   P ++KA G L  ++  + +HGHVLKL   D ++V +SL+ MY KC
Sbjct: 171 EMLENGILGDNF-VLPNVLKACGALNVVEFGKCVHGHVLKLSYEDCVFVASSLIDMYGKC 229

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTRE 322
           G  +DA  +F+ MCER++V+WN+++  + Q+ F+  ++  F  M  E
Sbjct: 230 GVLDDARKVFDCMCERNVVAWNSLIVSYMQNGFNEEAIGVFYDMRTE 276



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/87 (33%), Positives = 48/87 (55%)
 Frame = +2

Query: 53  LIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERD 232
           ++ A   LRD+K+ R+ H   ++    +DI V + ++ MY KC    DA  +F+   E+D
Sbjct: 389 ILSASAELRDLKLGREGHCFCIRNNFENDIVVASGIINMYSKCDKIPDARRVFDYTLEKD 448

Query: 233 LVSWNTMLSGFQQSMFHIGSLMFFSRM 313
           LV WNT+L+ + +      SL  F +M
Sbjct: 449 LVLWNTLLAAYAEVGLSGESLRLFYQM 475


>gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
           gi|31433484|gb|AAP54989.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 905

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/107 (38%), Positives = 64/107 (59%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EMLD GL  + F F   ++     L  I++ +QIHG ++K  +LDD Y+ ++L+ MY KC
Sbjct: 585 EMLDMGLKPDHFTF-ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKC 643

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTRE 322
           G   D++ +FE + +RD VSWN M+ G+      + +L  F RM +E
Sbjct: 644 GDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKE 690



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/104 (31%), Positives = 59/104 (56%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EML +G+  + F +   ++KA   LR ++    +H  V+K G+  D +V ++++ MY KC
Sbjct: 484 EMLRFGMKPDDFTY-GSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKC 542

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRM 313
           G  ++A  + + +  + +VSWN +LSGF  +     +  FFS M
Sbjct: 543 GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEM 586



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/114 (31%), Positives = 63/114 (55%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EM   G+S ++  F   L+K+   L ++ +  Q+H   +K G+  D+   ++L+ MY KC
Sbjct: 181 EMARRGVSPDRTTF-AVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKC 239

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTREFGIGLSR 343
            + +DA+  F  M ER+ VSW   ++G  Q+  ++  L  F  M R  G+G+S+
Sbjct: 240 RSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR-LGLGVSQ 292



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/79 (35%), Positives = 49/79 (62%)
 Frame = +2

Query: 95  RQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERDLVSWNTMLSGFQQS 274
           +Q+H   +K G   DI V N++L +Y KC A  +A  IF+ M ++D VSWN +++  +Q+
Sbjct: 413 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQN 472

Query: 275 MFHIGSLMFFSRMTREFGI 331
             +  +++ F+ M R FG+
Sbjct: 473 GHYDDTILHFNEMLR-FGM 490


>ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
           gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa
           Japonica Group]
          Length = 863

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/107 (38%), Positives = 64/107 (59%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EMLD GL  + F F   ++     L  I++ +QIHG ++K  +LDD Y+ ++L+ MY KC
Sbjct: 543 EMLDMGLKPDHFTF-ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKC 601

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTRE 322
           G   D++ +FE + +RD VSWN M+ G+      + +L  F RM +E
Sbjct: 602 GDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKE 648



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/104 (31%), Positives = 59/104 (56%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EML +G+  + F +   ++KA   LR ++    +H  V+K G+  D +V ++++ MY KC
Sbjct: 442 EMLRFGMKPDDFTY-GSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKC 500

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRM 313
           G  ++A  + + +  + +VSWN +LSGF  +     +  FFS M
Sbjct: 501 GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEM 544



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/114 (31%), Positives = 63/114 (55%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EM   G+S ++  F   L+K+   L ++ +  Q+H   +K G+  D+   ++L+ MY KC
Sbjct: 139 EMARRGVSPDRTTF-AVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKC 197

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTREFGIGLSR 343
            + +DA+  F  M ER+ VSW   ++G  Q+  ++  L  F  M R  G+G+S+
Sbjct: 198 RSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR-LGLGVSQ 250



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/79 (35%), Positives = 49/79 (62%)
 Frame = +2

Query: 95  RQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERDLVSWNTMLSGFQQS 274
           +Q+H   +K G   DI V N++L +Y KC A  +A  IF+ M ++D VSWN +++  +Q+
Sbjct: 371 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQN 430

Query: 275 MFHIGSLMFFSRMTREFGI 331
             +  +++ F+ M R FG+
Sbjct: 431 GHYDDTILHFNEMLR-FGM 448


>gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/107 (38%), Positives = 64/107 (59%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EMLD GL  + F F   ++     L  I++ +QIHG ++K  +LDD Y+ ++L+ MY KC
Sbjct: 543 EMLDMGLKPDHFTF-ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKC 601

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTRE 322
           G   D++ +FE + +RD VSWN M+ G+      + +L  F RM +E
Sbjct: 602 GDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKE 648



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/104 (31%), Positives = 59/104 (56%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EML +G+  + F +   ++KA   LR ++    +H  V+K G+  D +V ++++ MY KC
Sbjct: 442 EMLRFGMKPDDFTY-GSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKC 500

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRM 313
           G  ++A  + + +  + +VSWN +LSGF  +     +  FFS M
Sbjct: 501 GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEM 544



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/114 (31%), Positives = 63/114 (55%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EM   G+S ++  F   L+K+   L ++ +  Q+H   +K G+  D+   ++L+ MY KC
Sbjct: 139 EMARRGVSPDRTTF-AVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKC 197

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTREFGIGLSR 343
            + +DA+  F  M ER+ VSW   ++G  Q+  ++  L  F  M R  G+G+S+
Sbjct: 198 RSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR-LGLGVSQ 250



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/79 (35%), Positives = 49/79 (62%)
 Frame = +2

Query: 95  RQIHGHVLKLGVLDDIYVMNSLLGMYWKCGAAEDAIWIFENMCERDLVSWNTMLSGFQQS 274
           +Q+H   +K G   DI V N++L +Y KC A  +A  IF+ M ++D VSWN +++  +Q+
Sbjct: 371 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQN 430

Query: 275 MFHIGSLMFFSRMTREFGI 331
             +  +++ F+ M R FG+
Sbjct: 431 GHYDDTILHFNEMLR-FGM 448


>gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
          Length = 799

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/107 (38%), Positives = 64/107 (59%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EMLD GL  + F F   ++     L  I++ +QIHG ++K  +LDD Y+ ++L+ MY KC
Sbjct: 479 EMLDMGLKPDHFTF-ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKC 537

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTRE 322
           G   D++ +FE + +RD VSWN M+ G+      + +L  F RM +E
Sbjct: 538 GDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKE 584



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/114 (31%), Positives = 64/114 (56%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EM   G+S ++  F   L+K+   L ++ +  Q+H   +K G+  D+   ++L+ MY KC
Sbjct: 139 EMARRGVSPDRTTF-AVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKC 197

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTREFGIGLSR 343
            + +DA+  F  M ER+ VSW + ++G  Q+  ++  L  F  M R  G+G+S+
Sbjct: 198 RSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQR-LGLGVSQ 250


>gb|AAL79803.1|AC079874_26 putative pentatricopeptide repeat domain containing protein [Oryza
           sativa Japonica Group]
          Length = 391

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/107 (38%), Positives = 64/107 (59%)
 Frame = +2

Query: 2   EMLDYGLSVEQFQFFPPLIKAFGGLRDIKMSRQIHGHVLKLGVLDDIYVMNSLLGMYWKC 181
           EMLD GL  + F F   ++     L  I++ +QIHG ++K  +LDD Y+ ++L+ MY KC
Sbjct: 71  EMLDMGLKPDHFTF-ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKC 129

Query: 182 GAAEDAIWIFENMCERDLVSWNTMLSGFQQSMFHIGSLMFFSRMTRE 322
           G   D++ +FE + +RD VSWN M+ G+      + +L  F RM +E
Sbjct: 130 GDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKE 176