BLASTX nr result
ID: Paeonia24_contig00039866
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00039866
(269 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 91 3e-18
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 88 2e-17
emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera] 87 3e-17
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 87 4e-17
emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group] 86 1e-16
emb|CAE01890.2| OSJNBa0035O13.13 [Oryza sativa Japonica Group] 86 1e-16
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 85 1e-16
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera] 85 1e-16
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 85 2e-16
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 85 2e-16
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 85 2e-16
gb|AAK14317.1|AF325187_1 putative POL3-like reverse transcriptas... 85 2e-16
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 84 2e-16
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 84 2e-16
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 84 2e-16
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 84 2e-16
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group] 84 2e-16
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 84 2e-16
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 84 3e-16
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 90 4e-16
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 90.5 bits (223), Expect(2) = 3e-18
Identities = 48/93 (51%), Positives = 58/93 (62%), Gaps = 13/93 (13%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYLH-- 99
LQ +ES SP AVP LLVPKKD W+MCVD AINNIT KY +P+PR +D+L+ LH
Sbjct: 685 LQAGFIQESLSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRYPIPRLDDMLDELHGA 744
Query: 98 ----------GFHQIRIMIRNEWKNVFKTSGWL 30
G+HQIR+ +EWK FKT L
Sbjct: 745 KIFSKIDLRRGYHQIRMQKGDEWKTAFKTKNGL 777
Score = 26.6 bits (57), Expect(2) = 3e-18
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 779 EWLVMPFGLTNAPS 792
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 88.2 bits (217), Expect(2) = 2e-17
Identities = 46/83 (55%), Positives = 55/83 (66%), Gaps = 13/83 (15%)
Frame = -1
Query: 251 RESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYLH-------- 99
RES SP AVP LLVPKKD +W+MCVD AINNIT KY P+PR +D+L+ LH
Sbjct: 940 RESMSPCAVPVLLVPKKDGSWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSSIFSKV 999
Query: 98 ----GFHQIRIMIRNEWKNVFKT 42
G+HQIR+ +EWK FKT
Sbjct: 1000 DLKSGYHQIRMKEGDEWKTAFKT 1022
Score = 26.6 bits (57), Expect(2) = 2e-17
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 1028 EWLVMPFGLTNAPS 1041
>emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]
Length = 1323
Score = 87.4 bits (215), Expect(2) = 3e-17
Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 13/87 (14%)
Frame = -1
Query: 251 RESKSPA-VPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--------- 102
RES SP VP+LL PKKD +W+MCVDS AIN ITTKY FP+PR +D+L+ +
Sbjct: 541 RESLSPCGVPTLLTPKKDGSWRMCVDSRAINKITTKYQFPIPRLDDMLDMMVGSVIFSKI 600
Query: 101 ---HGFHQIRIMIRNEWKNVFKTSGWL 30
G+HQIR + +EWK FKT L
Sbjct: 601 DLRSGYHQIRXRLGDEWKTSFKTKDGL 627
Score = 26.6 bits (57), Expect(2) = 3e-17
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 629 EWLVMPFGLTNAPS 642
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 87.0 bits (214), Expect(2) = 4e-17
Identities = 46/89 (51%), Positives = 57/89 (64%), Gaps = 13/89 (14%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP AVP +LVPKKD +W+MCVD AINNIT +Y P+PR +D+L+ L
Sbjct: 745 LDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITVRYRHPIPRLDDMLDELSGS 804
Query: 101 ---------HGFHQIRIMIRNEWKNVFKT 42
GFHQIR+ I +EWK FKT
Sbjct: 805 MIFSKIDLRSGFHQIRMKIGDEWKTAFKT 833
Score = 26.6 bits (57), Expect(2) = 4e-17
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 839 EWLVMPFGLTNAPS 852
>emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]
Length = 1239
Score = 85.5 bits (210), Expect(2) = 1e-16
Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 13/89 (14%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP AVP LLVPKKD +W+MCVD AINNIT +Y P+PR +D+L+ L
Sbjct: 548 LDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGS 607
Query: 101 ---------HGFHQIRIMIRNEWKNVFKT 42
G+HQIR+ + +EWK FKT
Sbjct: 608 LVFSKIDLRSGYHQIRMKLGDEWKTAFKT 636
Score = 26.6 bits (57), Expect(2) = 1e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 642 EWLVMPFGLTNAPS 655
>emb|CAE01890.2| OSJNBa0035O13.13 [Oryza sativa Japonica Group]
Length = 1021
Score = 85.5 bits (210), Expect(2) = 1e-16
Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 13/89 (14%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP AVP LLVPKKD +W+MCVD AINNIT +Y P+PR +D+L+ L
Sbjct: 548 LDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGS 607
Query: 101 ---------HGFHQIRIMIRNEWKNVFKT 42
G+HQIR+ + +EWK FKT
Sbjct: 608 LVFSKIDLRSGYHQIRMKLGDEWKTTFKT 636
Score = 26.6 bits (57), Expect(2) = 1e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 642 EWLVMPFGLTNAPS 655
>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
Length = 1521
Score = 85.1 bits (209), Expect(2) = 1e-16
Identities = 46/93 (49%), Positives = 57/93 (61%), Gaps = 13/93 (13%)
Frame = -1
Query: 269 LQEEMTRESKSPA-VPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP VP+LL PKKD +W+MCVDS AIN IT KY FP+PR +D+L+ +
Sbjct: 647 LTKGFIRESLSPCGVPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMMVGS 706
Query: 101 ---------HGFHQIRIMIRNEWKNVFKTSGWL 30
G+HQIRI +EWK FKT L
Sbjct: 707 VIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGL 739
Score = 26.6 bits (57), Expect(2) = 1e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 741 EWLVMPFGLTNAPS 754
>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
Length = 1392
Score = 85.1 bits (209), Expect(2) = 1e-16
Identities = 46/93 (49%), Positives = 57/93 (61%), Gaps = 13/93 (13%)
Frame = -1
Query: 269 LQEEMTRESKSPA-VPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP VP+LL PKKD +W+MCVDS AIN IT KY FP+PR +D+L+ +
Sbjct: 606 LTKGFIRESLSPCGVPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMMVGS 665
Query: 101 ---------HGFHQIRIMIRNEWKNVFKTSGWL 30
G+HQIRI +EWK FKT L
Sbjct: 666 VIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGL 698
Score = 26.6 bits (57), Expect(2) = 1e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 700 EWLVMPFGLTNAPS 713
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 84.7 bits (208), Expect(2) = 2e-16
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 13/89 (14%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP AVP +LVPKKD +W+MCVD AINNIT +Y P+PR +D+L+ L
Sbjct: 742 LDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGS 801
Query: 101 ---------HGFHQIRIMIRNEWKNVFKT 42
G+HQIR+ + +EWK FKT
Sbjct: 802 IVFSKVDLRSGYHQIRMKLGDEWKTAFKT 830
Score = 26.6 bits (57), Expect(2) = 2e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 836 EWLVMPFGLTNAPS 849
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 84.7 bits (208), Expect(2) = 2e-16
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 13/89 (14%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP AVP +LVPKKD +W+MCVD AINNIT +Y P+PR +D+L+ L
Sbjct: 1084 LDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGS 1143
Query: 101 ---------HGFHQIRIMIRNEWKNVFKT 42
G+HQIR+ + +EWK FKT
Sbjct: 1144 IVFSKVDLRSGYHQIRMKLGDEWKTTFKT 1172
Score = 26.6 bits (57), Expect(2) = 2e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 1178 EWLVMPFGLTNAPS 1191
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 84.7 bits (208), Expect(2) = 2e-16
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 13/89 (14%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP AVP +LVPKKD +W+MCVD AINNIT +Y P+PR +D+L+ L
Sbjct: 1075 LDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGS 1134
Query: 101 ---------HGFHQIRIMIRNEWKNVFKT 42
G+HQIR+ + +EWK FKT
Sbjct: 1135 IVFSKVDLRSGYHQIRMKLGDEWKTTFKT 1163
Score = 26.6 bits (57), Expect(2) = 2e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 1169 EWLVMPFGLTNAPS 1182
>gb|AAK14317.1|AF325187_1 putative POL3-like reverse transcriptase [Phaseolus coccineus]
Length = 343
Score = 84.7 bits (208), Expect(2) = 2e-16
Identities = 45/89 (50%), Positives = 56/89 (62%), Gaps = 13/89 (14%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYLH-- 99
L++ ++S SP AVP LLVPKKD W+MC D AINNIT KY P+PR +D+L+ LH
Sbjct: 68 LEKGWVQKSLSPCAVPVLLVPKKDGKWRMCCDCRAINNITIKYRHPIPRLDDMLDELHGS 127
Query: 98 ----------GFHQIRIMIRNEWKNVFKT 42
G+HQIRI +EWK FKT
Sbjct: 128 TLFSKIDLKSGYHQIRIKEGDEWKTAFKT 156
Score = 26.6 bits (57), Expect(2) = 2e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 162 EWLVMPFGLTNAPS 175
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 84.3 bits (207), Expect(2) = 2e-16
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 13/89 (14%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP +VP LLVPKKD +W+MCVD AINNIT +Y P+PR +D+L+ L
Sbjct: 666 LDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGS 725
Query: 101 ---------HGFHQIRIMIRNEWKNVFKT 42
G+HQIR+ + +EWK FKT
Sbjct: 726 LVFSKIDLCSGYHQIRMKLGDEWKTAFKT 754
Score = 26.6 bits (57), Expect(2) = 2e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 760 EWLVMPFGLTNAPS 773
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 84.3 bits (207), Expect(2) = 2e-16
Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 13/89 (14%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP AVP +LVPKKD W+MCVD AINNIT +Y P+PR +D+L+ L
Sbjct: 745 LDKGYVRESLSPCAVPVILVPKKDGTWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGA 804
Query: 101 ---------HGFHQIRIMIRNEWKNVFKT 42
G+HQIR+ + +EWK FKT
Sbjct: 805 IVFSKVDLRSGYHQIRMKLGDEWKTAFKT 833
Score = 26.6 bits (57), Expect(2) = 2e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 839 EWLVMPFGLTNAPS 852
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 84.3 bits (207), Expect(2) = 2e-16
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 13/89 (14%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP +VP LLVPKKD +W+MCVD AINNIT +Y P+PR +D+L+ L
Sbjct: 770 LDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGS 829
Query: 101 ---------HGFHQIRIMIRNEWKNVFKT 42
G+HQIR+ + +EWK FKT
Sbjct: 830 LVFSKIDLRSGYHQIRMKLGDEWKTAFKT 858
Score = 26.6 bits (57), Expect(2) = 2e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 864 EWLVMPFGLTNAPS 877
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 84.3 bits (207), Expect(2) = 2e-16
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 13/89 (14%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP +VP LLVPKKD +W+MCVD AINNIT +Y P+PR +D+L+ L
Sbjct: 770 LDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGS 829
Query: 101 ---------HGFHQIRIMIRNEWKNVFKT 42
G+HQIR+ + +EWK FKT
Sbjct: 830 LVFSKIDLRSGYHQIRMKLGDEWKTAFKT 858
Score = 26.6 bits (57), Expect(2) = 2e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 864 EWLVMPFGLTNAPS 877
>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
Length = 1170
Score = 84.3 bits (207), Expect(2) = 2e-16
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 13/89 (14%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP +VP LLVPKKD +W+MCVD AINNIT +Y P+PR +D+L+ L
Sbjct: 403 LDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGS 462
Query: 101 ---------HGFHQIRIMIRNEWKNVFKT 42
G+HQIR+ + +EWK FKT
Sbjct: 463 LVFYKIDLRSGYHQIRMKLGDEWKTAFKT 491
Score = 26.6 bits (57), Expect(2) = 2e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 497 EWLVMPFGLTNAPS 510
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 84.3 bits (207), Expect(2) = 2e-16
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 13/89 (14%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP +VP LLVPKKD +W+MCVD AINNIT +Y P+PR +D+L+ L
Sbjct: 83 LDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGS 142
Query: 101 ---------HGFHQIRIMIRNEWKNVFKT 42
G+HQIR+ + +EWK FKT
Sbjct: 143 LVFCKIDLRSGYHQIRMKLGDEWKTAFKT 171
Score = 26.6 bits (57), Expect(2) = 2e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 177 EWLVMPFGLTNAPS 190
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 84.0 bits (206), Expect(2) = 3e-16
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 13/89 (14%)
Frame = -1
Query: 269 LQEEMTRESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--- 102
L + RES SP ++P LLVPKKD +W+MCVD AINNIT +Y P+PR +D+L+ L
Sbjct: 770 LDKGYVRESLSPCSIPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGS 829
Query: 101 ---------HGFHQIRIMIRNEWKNVFKT 42
G+HQIR+ + +EWK FKT
Sbjct: 830 LVFSKIDLRSGYHQIRMKLGDEWKTAFKT 858
Score = 26.6 bits (57), Expect(2) = 3e-16
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 42 QWLVMPIELSNAPS 1
+WLVMP L+NAPS
Sbjct: 864 EWLVMPFGLTNAPS 877
>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 89.7 bits (221), Expect = 4e-16
Identities = 52/101 (51%), Positives = 62/101 (61%), Gaps = 21/101 (20%)
Frame = -1
Query: 251 RESKSP-AVPSLLVPKKDDNWKMCVDSTAINNITTKYSFPMPRSEDILNYL--------- 102
RES SP +VP+LLVPKKD +W+MC DS AINNIT KY FP+PR +DIL+ L
Sbjct: 634 RESLSPCSVPALLVPKKDGSWRMCTDSRAINNITIKYRFPIPRLDDILDELSGAQLFSKI 693
Query: 101 ---HGFHQIRIMIRNEWKNVFKTS----GWLC----LSNYP 12
G+HQ+RI +EWK FKT WL LSN P
Sbjct: 694 DLRQGYHQVRIKEGDEWKTAFKTKHGLYEWLVMPFGLSNAP 734