BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00039798
         (392 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   214   1e-53
gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsi...   195   5e-48
gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein ...   193   2e-47
pir||E84492 probable retroelement pol polyprotein [imported] - A...   190   2e-46
gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]              188   8e-46
gb|AAF97299.1|AC007843_2 Similar to copia-type reverse transcrip...   188   8e-46
gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsi...   188   8e-46
gb|AAZ66952.1| 117M18_33 [Brassica rapa]                              186   4e-45
gb|AAD15376.1| putative retroelement pol polyprotein [Arabidopsi...   158   6e-37
gb|AFJ66169.1| hypothetical protein 11M19.13 [Arabidopsis halleri]    157   1e-36
gb|AAN65018.1| putative polyprotein [Oryza sativa Japonica Group...   155   7e-36
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   154   2e-35
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   151   1e-34
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   151   1e-34
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...   150   1e-34
gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subc...   145   7e-33
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]        145   7e-33
gb|AAP12935.1| retrotransposon protein, putative, unclassified [...   145   7e-33
gb|ABW74566.1| integrase [Boechera divaricarpa]                       144   1e-32
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   143   3e-32

>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  214 bits (545), Expect = 1e-53
 Identities = 99/130 (76%), Positives = 115/130 (88%)
 Frame = +2

Query: 2   TILMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTA 181
           +IL+KEK E F KFKTF+ LVEKE  K I+TLRTDRGGEFTS +F D+CN NGI+RHLTA
Sbjct: 428 SILLKEKSEVFEKFKTFKALVEKEVNKVIVTLRTDRGGEFTSRDFQDYCNNNGIRRHLTA 487

Query: 182 PYTPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPY 361
           PYTPQQNGVVERRNR LMEMTRS+LKAM VPNY+WGEAVRH+TY+INR+PTRAL+N TPY
Sbjct: 488 PYTPQQNGVVERRNRTLMEMTRSMLKAMNVPNYMWGEAVRHATYLINRVPTRALKNQTPY 547

Query: 362 ESLREKKPSL 391
           ES + +KPS+
Sbjct: 548 ESFKGRKPSI 557


>gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1200

 Score =  195 bits (496), Expect = 5e-48
 Identities = 92/130 (70%), Positives = 109/130 (83%)
 Frame = +2

Query: 2   TILMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTA 181
           + L+KEK EAFGKFKTF+  VE+E  ++I TLRTDRGGEF S EF  FC E GI RHLTA
Sbjct: 484 SFLLKEKSEAFGKFKTFKATVEQETGEKIKTLRTDRGGEFLSQEFQTFCEEEGIIRHLTA 543

Query: 182 PYTPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPY 361
           PYTPQQNGVVERRNR L+ MTRSI+K M VPNYLWGEA+RH+TY+INR+ TRAL N TPY
Sbjct: 544 PYTPQQNGVVERRNRTLLGMTRSIMKHMSVPNYLWGEAIRHATYLINRVGTRALINQTPY 603

Query: 362 ESLREKKPSL 391
           E+L++KKP++
Sbjct: 604 EALKKKKPNV 613


>gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1150

 Score =  193 bits (491), Expect = 2e-47
 Identities = 89/130 (68%), Positives = 108/130 (83%)
 Frame = +2

Query: 2   TILMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTA 181
           TIL+KEK EAF KF+ F+ LVE+E    I T RTDRGGEF S EF++ C E+GIKRHLTA
Sbjct: 403 TILLKEKSEAFNKFRKFKSLVEQESGARIQTFRTDRGGEFVSQEFNNLCQESGIKRHLTA 462

Query: 182 PYTPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPY 361
           PYTPQQNGVVERRNR L+EMTRSI+K M VPNYLWGE +RHSTY++NRI TR++++ TPY
Sbjct: 463 PYTPQQNGVVERRNRTLLEMTRSIMKHMHVPNYLWGEGIRHSTYLLNRIATRSVQDKTPY 522

Query: 362 ESLREKKPSL 391
           E+ R KKP++
Sbjct: 523 ETFRMKKPNI 532


>pir||E84492 probable retroelement pol polyprotein [imported] - Arabidopsis
           thaliana
          Length = 531

 Score =  190 bits (483), Expect = 2e-46
 Identities = 89/128 (69%), Positives = 105/128 (82%)
 Frame = +2

Query: 2   TILMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTA 181
           T+L+KEKG+AF KFK F+ LVEKE  ++I T  TDRGGEF S EF+ FC   GI+RHLTA
Sbjct: 399 TVLLKEKGDAFFKFKNFKALVEKESGEKIQTFITDRGGEFVSGEFNSFCERTGIRRHLTA 458

Query: 182 PYTPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPY 361
           PYTPQQNG VERR+R L+EM RSILK M +PNYLWGEA+RHSTY+INR+ TRAL++ TPY
Sbjct: 459 PYTPQQNGEVERRDRTLLEMARSILKHMHMPNYLWGEAIRHSTYLINRVATRALKDRTPY 518

Query: 362 ESLREKKP 385
           E  REKKP
Sbjct: 519 ECFREKKP 526


>gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]
          Length = 1188

 Score =  188 bits (477), Expect = 8e-46
 Identities = 86/130 (66%), Positives = 107/130 (82%)
 Frame = +2

Query: 2   TILMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTA 181
           TIL+KEK +AF KF  F+ LVEKE    + T RTDRGGEF S EF+ FC ++GI RHLTA
Sbjct: 473 TILLKEKADAFQKFCNFKSLVEKESSTRVQTFRTDRGGEFVSHEFNSFCEKSGITRHLTA 532

Query: 182 PYTPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPY 361
           PYTPQQNGVVERRNR +MEMTRSILK M +PNYLWGEA+RH+TY++NRI TR+L++ TPY
Sbjct: 533 PYTPQQNGVVERRNRTMMEMTRSILKHMHLPNYLWGEAIRHTTYLLNRIITRSLKDKTPY 592

Query: 362 ESLREKKPSL 391
           E  R+++P++
Sbjct: 593 ECFRDRRPTV 602


>gb|AAF97299.1|AC007843_2 Similar to copia-type reverse transcriptase proteins [Arabidopsis
           thaliana]
          Length = 833

 Score =  188 bits (477), Expect = 8e-46
 Identities = 86/130 (66%), Positives = 107/130 (82%)
 Frame = +2

Query: 2   TILMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTA 181
           TIL+KEK +AF KF  F+ LVEKE    + T RTDRGGEF S EF+ FC ++GI RHLTA
Sbjct: 91  TILLKEKADAFQKFCNFKSLVEKESSTRVQTFRTDRGGEFVSHEFNSFCEKSGITRHLTA 150

Query: 182 PYTPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPY 361
           PYTPQQNGVVERRNR +MEMTRSILK M +PNYLWGEA+RH+TY++NRI TR+L++ TPY
Sbjct: 151 PYTPQQNGVVERRNRTMMEMTRSILKHMHLPNYLWGEAIRHTTYLLNRIITRSLKDKTPY 210

Query: 362 ESLREKKPSL 391
           E  R+++P++
Sbjct: 211 ECFRDRRPTV 220


>gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1307

 Score =  188 bits (477), Expect = 8e-46
 Identities = 88/130 (67%), Positives = 107/130 (82%)
 Frame = +2

Query: 2   TILMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTA 181
           ++L+KEK EAF KF+ F+  VE+E   +I T RTD+GGEF S EF DFC + GI RHLTA
Sbjct: 488 SMLLKEKSEAFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTA 547

Query: 182 PYTPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPY 361
           PYTPQQNGVVERRNR L+ MTRSILK MK+PNYLWGEAVRHSTYIINR+ TR+L+N TPY
Sbjct: 548 PYTPQQNGVVERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPY 607

Query: 362 ESLREKKPSL 391
           E  +++KP++
Sbjct: 608 EVFKQRKPNV 617


>gb|AAZ66952.1| 117M18_33 [Brassica rapa]
          Length = 681

 Score =  186 bits (471), Expect = 4e-45
 Identities = 88/130 (67%), Positives = 105/130 (80%)
 Frame = +2

Query: 2   TILMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTA 181
           T+L+++K EA  KFK FR + E+E K  + T RTDRGGEFTS +F+ FC ++GI RHLTA
Sbjct: 523 TVLLEKKSEALDKFKRFRTVAEQETKMVLKTFRTDRGGEFTSHDFASFCEKHGINRHLTA 582

Query: 182 PYTPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPY 361
           PY+PQQNGVVERRNR L+EMTRSILK   VPN LWGEA RH+TY+INRI TR+LE MTPY
Sbjct: 583 PYSPQQNGVVERRNRTLLEMTRSILKHKNVPNVLWGEATRHATYLINRIGTRSLEGMTPY 642

Query: 362 ESLREKKPSL 391
           E LR KKP+L
Sbjct: 643 ECLRGKKPNL 652


>gb|AAD15376.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 962

 Score =  158 bits (400), Expect = 6e-37
 Identities = 72/109 (66%), Positives = 90/109 (82%)
 Frame = +2

Query: 2    TILMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTA 181
            T L+KEK ++F KFK FR LVE+E + +I T RT+RGGEF   EF+ FC E+GIKRHLTA
Sbjct: 847  TALLKEKSDSFNKFKQFRALVEQETRIKIQTFRTNRGGEFILHEFTKFCEESGIKRHLTA 906

Query: 182  PYTPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRI 328
            PY+PQQNGVVERRNR LM MTRS++K M +P+YLWGE +RH+TY++NRI
Sbjct: 907  PYSPQQNGVVERRNRTLMGMTRSVMKHMHIPSYLWGETIRHATYLLNRI 955


>gb|AFJ66169.1| hypothetical protein 11M19.13 [Arabidopsis halleri]
          Length = 1273

 Score =  157 bits (398), Expect = 1e-36
 Identities = 78/89 (87%), Positives = 81/89 (91%)
 Frame = +2

Query: 2   TILMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTA 181
           TILMKEKGEAFGK K FRQLVEKEF+KEI+TLRTDRGGEF S EF+DFC EN IKRHLTA
Sbjct: 440 TILMKEKGEAFGKLKAFRQLVEKEFEKEIITLRTDRGGEFMSREFNDFCEENRIKRHLTA 499

Query: 182 PYTPQQNGVVERRNRILMEMTRSILKAMK 268
           PYTPQQNGVVERRNR LMEMTRSILKA K
Sbjct: 500 PYTPQQNGVVERRNRTLMEMTRSILKAKK 528


>gb|AAN65018.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711344|gb|ABF99139.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1394

 Score =  155 bits (391), Expect = 7e-36
 Identities = 74/128 (57%), Positives = 92/128 (71%)
 Frame = +2

Query: 8   LMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTAPY 187
           ++K K +A   F  F+ L E    + I TLR+DRGG+F S EF+  C   GI+RHLTAPY
Sbjct: 506 VIKSKDQAVEAFTKFKPLAENVAGRRIKTLRSDRGGKFLSGEFAQVCESAGIQRHLTAPY 565

Query: 188 TPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPYES 367
           +PQQNGVVERRNR +M M RS+LK M VP  LWGEAVRH+ YI+NR+PT+A+ N TPYE+
Sbjct: 566 SPQQNGVVERRNRSVMVMARSLLKGMSVPGRLWGEAVRHAVYILNRLPTKAMGNRTPYEA 625

Query: 368 LREKKPSL 391
              KKP L
Sbjct: 626 WTGKKPHL 633


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108710383|gb|ABF98178.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score =  154 bits (388), Expect = 2e-35
 Identities = 71/128 (55%), Positives = 93/128 (72%)
 Frame = +2

Query: 8   LMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTAPY 187
           ++K K +A   F+ F+ L E    + I TLRTDRGGEF S EF+  C+  GI+RHLT PY
Sbjct: 544 VIKSKDQALAAFEKFKPLAENTAGRTIKTLRTDRGGEFLSGEFARVCDAAGIERHLTVPY 603

Query: 188 TPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPYES 367
           +PQQNGVVERRNR +M M RS+LK M VP  +WGEAVRH+ +++NR+PT+A+ N TP+E+
Sbjct: 604 SPQQNGVVERRNRTVMAMARSLLKGMSVPGRMWGEAVRHAVFLLNRLPTKAMGNRTPFEA 663

Query: 368 LREKKPSL 391
              KKP L
Sbjct: 664 WTGKKPHL 671


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
           gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
           Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  151 bits (381), Expect = 1e-34
 Identities = 69/128 (53%), Positives = 92/128 (71%)
 Frame = +2

Query: 8   LMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTAPY 187
           ++K K +A   F  F+ L E    + I TLR+DRGGEF S EF+  C + GI+RHLTAPY
Sbjct: 591 VIKTKDQALEAFTKFKPLAENTAGRRIKTLRSDRGGEFLSGEFAQLCEQAGIQRHLTAPY 650

Query: 188 TPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPYES 367
           +PQQNGVVERRNR +M M RS++K M VP   WGEAVRH+ Y++NR+PT+A+ + TP+E+
Sbjct: 651 SPQQNGVVERRNRSVMAMARSLMKGMSVPGRFWGEAVRHAVYLLNRLPTKAMGDRTPFEA 710

Query: 368 LREKKPSL 391
              +KP L
Sbjct: 711 WTGRKPQL 718


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  151 bits (381), Expect = 1e-34
 Identities = 69/128 (53%), Positives = 92/128 (71%)
 Frame = +2

Query: 8   LMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTAPY 187
           ++K K +A   F  F+ L E    + I TLR+DRGGEF S EF+  C + GI+RHLTAPY
Sbjct: 591 VIKTKDQALEAFTKFKPLAENTAGRRIKTLRSDRGGEFLSGEFAQLCEQAGIQRHLTAPY 650

Query: 188 TPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPYES 367
           +PQQNGVVERRNR +M M RS++K M VP   WGEAVRH+ Y++NR+PT+A+ + TP+E+
Sbjct: 651 SPQQNGVVERRNRSVMAMARSLMKGMSVPGRFWGEAVRHAVYLLNRLPTKAMGDRTPFEA 710

Query: 368 LREKKPSL 391
              +KP L
Sbjct: 711 WTGRKPQL 718


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1409

 Score =  150 bits (380), Expect = 1e-34
 Identities = 68/128 (53%), Positives = 93/128 (72%)
 Frame = +2

Query: 8   LMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTAPY 187
           ++K K ++   F  F+ L E    + + TLR+DRGGEF S EF+  C E GI+RHLTAPY
Sbjct: 569 VLKTKDQSLDAFVKFKPLAENTAGRRVKTLRSDRGGEFLSGEFAQVCEEAGIQRHLTAPY 628

Query: 188 TPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPYES 367
           +PQQNGVVERRNR +M M RS+LK M+VP   WGEAVRH+ +++NR+PT+A+ + TP+E+
Sbjct: 629 SPQQNGVVERRNRTVMAMARSLLKGMRVPGRFWGEAVRHAVHLLNRLPTKAMGDRTPFEA 688

Query: 368 LREKKPSL 391
              +KP L
Sbjct: 689 WTGRKPQL 696


>gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1303

 Score =  145 bits (365), Expect = 7e-33
 Identities = 68/128 (53%), Positives = 89/128 (69%)
 Frame = +2

Query: 8   LMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTAPY 187
           ++K K +A   F  F+ L E      I TLRTD  GEF S EF+  C+E GI+RHLTAPY
Sbjct: 584 VIKTKDQALEMFAKFKPLAENTADHSIKTLRTDHSGEFLSGEFARVCDEAGIERHLTAPY 643

Query: 188 TPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPYES 367
           +PQQNGVVE RNR +M M RS+LK M VP  +WGEAVRH+ +++NR+PT+++   TP+E+
Sbjct: 644 SPQQNGVVEHRNRSVMAMARSLLKGMSVPGRMWGEAVRHAVFLLNRLPTKSMGEHTPFEA 703

Query: 368 LREKKPSL 391
              KKP L
Sbjct: 704 WTGKKPHL 711


>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
          Length = 893

 Score =  145 bits (365), Expect = 7e-33
 Identities = 68/128 (53%), Positives = 90/128 (70%)
 Frame = +2

Query: 8   LMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTAPY 187
           ++K K +A    + F+ L E    + I TLRTDRG EF S EF+  C+  GI+RHLTAPY
Sbjct: 404 VIKSKDQALAASEKFKPLAENTAGRTIKTLRTDRGSEFLSGEFARVCDAAGIERHLTAPY 463

Query: 188 TPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPYES 367
           +PQQNGVVE RNR +M M RS+LK M VP  +WGEAVRH+ +++NR+PT+A+ N T +E+
Sbjct: 464 SPQQNGVVEHRNRTVMAMARSLLKGMSVPGRMWGEAVRHAVFLLNRLPTKAMGNRTSFEA 523

Query: 368 LREKKPSL 391
              KKP L
Sbjct: 524 WMGKKPHL 531


>gb|AAP12935.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1283

 Score =  145 bits (365), Expect = 7e-33
 Identities = 68/128 (53%), Positives = 89/128 (69%)
 Frame = +2

Query: 8   LMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTAPY 187
           ++K K +A   F  F+ L E      I TLRTD  GEF S EF+  C+E GI+RHLTAPY
Sbjct: 584 VIKTKDQALEMFAKFKPLAENTADHSIKTLRTDHSGEFLSGEFARVCDEAGIERHLTAPY 643

Query: 188 TPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPYES 367
           +PQQNGVVE RNR +M M RS+LK M VP  +WGEAVRH+ +++NR+PT+++   TP+E+
Sbjct: 644 SPQQNGVVEHRNRSVMAMARSLLKGMSVPGRMWGEAVRHAVFLLNRLPTKSMGEHTPFEA 703

Query: 368 LREKKPSL 391
              KKP L
Sbjct: 704 WTGKKPHL 711


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  144 bits (363), Expect = 1e-32
 Identities = 65/127 (51%), Positives = 91/127 (71%)
 Frame = +2

Query: 11  MKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTAPYT 190
           +K KGEAF  FK F+ LVEK+ ++++  LRTDRGGEFTS++F+ FC + GI   LT  YT
Sbjct: 377 LKSKGEAFDMFKNFKALVEKQSEQQVKVLRTDRGGEFTSTKFNQFCEKEGIHHELTTAYT 436

Query: 191 PQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPYESL 370
           P+QNGV ER+N  ++EM RS+LK   +PN  W E+VR + Y++N  PT+A+ N TPYE+ 
Sbjct: 437 PEQNGVAERKNTTVVEMARSMLKERNLPNQFWAESVRTAVYLLNISPTKAVLNRTPYEAW 496

Query: 371 REKKPSL 391
             +KP +
Sbjct: 497 CGRKPGV 503


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
           gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1334

 Score =  143 bits (360), Expect = 3e-32
 Identities = 69/130 (53%), Positives = 91/130 (70%)
 Frame = +2

Query: 2   TILMKEKGEAFGKFKTFRQLVEKEFKKEIMTLRTDRGGEFTSSEFSDFCNENGIKRHLTA 181
           T L+ EK E F  FK F+  VE+E  K+++ LR+DRGGE+ S EF ++C E GIKR LTA
Sbjct: 531 TYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTA 590

Query: 182 PYTPQQNGVVERRNRILMEMTRSILKAMKVPNYLWGEAVRHSTYIINRIPTRALENMTPY 361
            YTPQQNGV ER+NR +M MTR +L  M VP   W EAV+++ YI+NR P++AL ++TP 
Sbjct: 591 AYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPE 650

Query: 362 ESLREKKPSL 391
           E     KPS+
Sbjct: 651 EKWSSWKPSV 660