BLASTX nr result
ID: Paeonia24_contig00038688
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00038688
(459 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 74 3e-11
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc... 69 7e-10
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 67 2e-09
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 67 2e-09
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 67 2e-09
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 67 2e-09
gb|AAB82754.1| retrofit [Oryza longistaminata] 67 3e-09
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 67 3e-09
emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera] 67 3e-09
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 67 3e-09
emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera] 67 3e-09
emb|CAN69753.1| hypothetical protein VITISV_024937 [Vitis vinifera] 67 3e-09
gb|AAU90262.1| integrase core domain containing protein [Oryza s... 67 3e-09
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc... 66 4e-09
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol... 66 4e-09
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 66 4e-09
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera] 66 6e-09
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 65 8e-09
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 65 8e-09
gb|AAX96308.1| retrotransposon protein, putative, Ty1-copia sub-... 65 1e-08
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPFQD 141
L+ SKR VFLGYSLNH+GY C D ++GRVYLSRHV+FDE+SFPF +
Sbjct: 642 LQLRSKRCVFLGYSLNHQGYRCFDPSSGRVYLSRHVLFDESSFPFTE 688
>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1016
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPF 135
LEF SK+ VFLGYS HKG+ CLD +TGRVY+SR V+FDEN FPF
Sbjct: 309 LEFRSKQCVFLGYSNIHKGFKCLDVSTGRVYISRDVVFDENVFPF 353
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPFQD 141
L+F SKR VFLG+S HKG+ CL+ +TGR+Y+SR V+FDEN FPF +
Sbjct: 692 LQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFDENIFPFTE 738
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPF 135
L++ S + VFLGYSL+HKGY CLD TGRVY+S HV+FDE FPF
Sbjct: 725 LQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPF 769
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPF 135
L++ S + VFLGYSL+HKGY CLD TGRVY+S HV+FDE FPF
Sbjct: 675 LQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPF 719
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPFQD 141
L+F SKR VFLG+S HKG+ CL+ +TGR+Y+SR V+FDEN FPF +
Sbjct: 725 LQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFDENIFPFTE 771
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 67.0 bits (162), Expect = 3e-09
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPF 135
L+F SK+ VFLG+S +HKG+ CLD ++GRVY+SR V+FDEN FPF
Sbjct: 698 LQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENVFPF 742
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 67.0 bits (162), Expect = 3e-09
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPF 135
L+F SK+ VFLG+S +HKG+ CLD ++GRVY+SR V+FDEN FPF
Sbjct: 698 LQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENIFPF 742
>emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera]
Length = 1139
Score = 66.6 bits (161), Expect = 3e-09
Identities = 27/44 (61%), Positives = 38/44 (86%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFP 132
L++ S + +FLGYSLNHKG+ CLD+ TGRVY++ HV+FDE++FP
Sbjct: 605 LQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTFP 648
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 66.6 bits (161), Expect = 3e-09
Identities = 27/44 (61%), Positives = 38/44 (86%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFP 132
L++ S + +FLGYSLNHKG+ CLD+ TGRVY++ HV+FDE++FP
Sbjct: 730 LQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTFP 773
>emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera]
Length = 1380
Score = 66.6 bits (161), Expect = 3e-09
Identities = 27/44 (61%), Positives = 38/44 (86%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFP 132
L++ S + +FLGYSLNHKG+ CLD+ TGRVY++ HV+FDE++FP
Sbjct: 520 LQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTFP 563
>emb|CAN69753.1| hypothetical protein VITISV_024937 [Vitis vinifera]
Length = 793
Score = 66.6 bits (161), Expect = 3e-09
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPF 135
L++ S + FLGYSLNHKG+ CLD+ TGRVY++ H +FDE++FPF
Sbjct: 324 LQYRSVQCFFLGYSLNHKGFLCLDYATGRVYITPHAVFDESTFPF 368
>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
Group] gi|108710062|gb|ABF97857.1| retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group]
Length = 1021
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPF 135
L+F SK+ VFLGYS HKG+ CLD TGRVY+SR V+FDEN FPF
Sbjct: 613 LQFRSKQCVFLGYSNIHKGFKCLDVATGRVYISRDVVFDENIFPF 657
>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1145
Score = 66.2 bits (160), Expect = 4e-09
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPFQD 141
L+F SKR FLG+S HKG+ CLD ++GRVY+SR V+FDEN FPF +
Sbjct: 568 LQFRSKRCAFLGFSNMHKGFKCLDISSGRVYISRDVVFDENIFPFSE 614
>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 969
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPF 135
L+F SK+ VFLGYS HKG+ CLD +TGRVY+SR V FDEN FPF
Sbjct: 545 LQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVTFDENFFPF 589
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1313
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPF 135
L+F SK+ VFLGYS HKG+ CLD +TGRVY+SR V FDEN FPF
Sbjct: 545 LQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVTFDENFFPF 589
>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
Length = 920
Score = 65.9 bits (159), Expect = 6e-09
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFP 132
L++ S + FLGYSLNHKG+ CLD+ TGRVY++ HV+FDE++FP
Sbjct: 533 LQYRSVQCFFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTFP 576
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 65.5 bits (158), Expect = 8e-09
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPF 135
L+F S R VFLGYS HKG+ CLD +TGR+Y+SR V+FDE+ FPF
Sbjct: 698 LQFRSTRCVFLGYSNMHKGFKCLDISTGRIYISRDVVFDEHVFPF 742
>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 900
Score = 65.5 bits (158), Expect = 8e-09
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPF 135
L F SK+ VFLGYS HKG+ CL+ N+GRVY+SR V+FDEN FPF
Sbjct: 130 LAFRSKQCVFLGYSPLHKGFKCLEVNSGRVYISRDVVFDENIFPF 174
>gb|AAX96308.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548933|gb|ABA91730.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1094
Score = 65.1 bits (157), Expect = 1e-08
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = +1
Query: 1 LEFWSKRYVFLGYSLNHKGYCCLDFNTGRVYLSRHVIFDENSFPFQD 141
L+F SKR VFLG+S HKG+ CL+ +TGRVY+SR V+FDE FPF +
Sbjct: 379 LQFRSKRCVFLGFSNMHKGFKCLEVSTGRVYISRDVVFDETIFPFSE 425