BLASTX nr result
ID: Paeonia24_contig00037906
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00037906
(426 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containi... 115 6e-24
ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Popu... 107 1e-21
ref|XP_002511477.1| pentatricopeptide repeat-containing protein,... 103 1e-20
ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containi... 102 7e-20
ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containi... 102 7e-20
ref|XP_006439718.1| hypothetical protein CICLE_v10018817mg [Citr... 100 2e-19
ref|XP_004236160.1| PREDICTED: pentatricopeptide repeat-containi... 95 3e-19
ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
ref|XP_006476695.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19
ref|XP_006344988.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-18
ref|XP_007036056.1| Plastid transcriptionally active 2 isoform 3... 96 4e-18
ref|XP_007036055.1| Plastid transcriptionally active 2 isoform 2... 96 4e-18
ref|XP_007036054.1| Plastid transcriptionally active 2 isoform 1... 96 4e-18
gb|EXB29767.1| hypothetical protein L484_008930 [Morus notabilis] 96 7e-18
ref|XP_004508810.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_006390383.1| hypothetical protein EUTSA_v10018112mg [Eutr... 94 3e-17
ref|XP_006300609.1| hypothetical protein CARUB_v10019779mg [Caps... 94 3e-17
ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arab... 94 3e-17
gb|EYU42502.1| hypothetical protein MIMGU_mgv1a001452mg [Mimulus... 93 3e-17
ref|XP_006843571.1| hypothetical protein AMTR_s00007p00097240 [A... 93 3e-17
>ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 115 bits (288), Expect = 6e-24
Identities = 54/68 (79%), Positives = 61/68 (89%)
Frame = +1
Query: 223 FPIRRADFSGYRRLISGLAKARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRG 402
FP + DF GY+R+++ A+ RAKPKEL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRG
Sbjct: 36 FPAKATDFFGYQRILASAARIRAKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRG 95
Query: 403 SIARCLDV 426
SIARCLDV
Sbjct: 96 SIARCLDV 103
>ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Populus trichocarpa]
gi|550322283|gb|EEF06266.2| hypothetical protein
POPTR_0015s08030g [Populus trichocarpa]
Length = 866
Score = 107 bits (268), Expect = 1e-21
Identities = 57/75 (76%), Positives = 59/75 (78%), Gaps = 5/75 (6%)
Frame = +1
Query: 217 FSFPI-----RRADFSGYRRLISGLAKARAKPKELILGNPSVTVEKGKYSYDVETLINKL 381
F FPI R FS R+ SG KARAKPKEL+LGNPSV VEKGKYSYDVETLINKL
Sbjct: 26 FPFPILPSHRRLVSFSSDRKAYSGAWKARAKPKELVLGNPSVVVEKGKYSYDVETLINKL 85
Query: 382 SSLPPRGSIARCLDV 426
SSLPPRGSIARCLDV
Sbjct: 86 SSLPPRGSIARCLDV 100
>ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550592|gb|EEF52079.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 754
Score = 103 bits (257), Expect(2) = 1e-20
Identities = 53/69 (76%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = +1
Query: 223 FPIRRA-DFSGYRRLISGLAKARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPR 399
+P RR SG R+ SG AKARAK KEL+LGNPSV VEKGKYSYDVETLINKLSSLPPR
Sbjct: 31 YPNRRLISLSGDRKTYSGAAKARAKTKELVLGNPSVVVEKGKYSYDVETLINKLSSLPPR 90
Query: 400 GSIARCLDV 426
GSIARCL++
Sbjct: 91 GSIARCLEI 99
Score = 21.9 bits (45), Expect(2) = 1e-20
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 104 LSKLMRIGTPT*PSHHLLFPYPTPHLFPYP 193
LS + + P+ +LL P P+L PYP
Sbjct: 3 LSPSLSLSNPSPLYTNLLKPNLKPNLLPYP 32
>ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 102 bits (253), Expect = 7e-20
Identities = 51/69 (73%), Positives = 57/69 (82%)
Frame = +1
Query: 220 SFPIRRADFSGYRRLISGLAKARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPR 399
+F +RR FS RL S + K RAK K+L+LGNPSV VEKGKYSYDVETLINKLSSLPPR
Sbjct: 37 NFSVRRRFFSDDWRLSSDVGKVRAKAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPR 96
Query: 400 GSIARCLDV 426
GSIARCLD+
Sbjct: 97 GSIARCLDI 105
>ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 102 bits (253), Expect = 7e-20
Identities = 51/69 (73%), Positives = 57/69 (82%)
Frame = +1
Query: 220 SFPIRRADFSGYRRLISGLAKARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPR 399
+F +RR FS RL S + K RAK K+L+LGNPSV VEKGKYSYDVETLINKLSSLPPR
Sbjct: 37 NFSVRRRFFSDDWRLSSDVGKVRAKAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPR 96
Query: 400 GSIARCLDV 426
GSIARCLD+
Sbjct: 97 GSIARCLDI 105
>ref|XP_006439718.1| hypothetical protein CICLE_v10018817mg [Citrus clementina]
gi|557541980|gb|ESR52958.1| hypothetical protein
CICLE_v10018817mg [Citrus clementina]
Length = 871
Score = 100 bits (250), Expect = 2e-19
Identities = 49/60 (81%), Positives = 54/60 (90%)
Frame = +1
Query: 247 SGYRRLISGLAKARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDV 426
SG R L SG + RAKPKEL+LG+P+VTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+
Sbjct: 45 SGRRSLTSGTLQVRAKPKELVLGSPTVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDM 104
>ref|XP_004236160.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Solanum lycopersicum]
Length = 860
Score = 95.1 bits (235), Expect(2) = 3e-19
Identities = 48/57 (84%), Positives = 53/57 (92%)
Frame = +1
Query: 253 YRRLISGLAKARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD 423
+RRL+ +A RAKPK+LILGNP+VTVEKGKYSYDVETLINKLSSLPPRGSIARCLD
Sbjct: 37 HRRLLLTVA-VRAKPKDLILGNPTVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD 92
Score = 25.4 bits (54), Expect(2) = 3e-19
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 128 TPT*PSHHLLFPYPTPHLFPYP 193
TP PSH LFP P+ + P
Sbjct: 13 TPVPPSHRYLFPAKIPNYYKLP 34
>ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 862
Score = 99.0 bits (245), Expect = 6e-19
Identities = 50/63 (79%), Positives = 54/63 (85%), Gaps = 3/63 (4%)
Frame = +1
Query: 247 SGYRRLISGLA---KARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARC 417
SG+R+ I G RAKPK+LILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARC
Sbjct: 33 SGHRKFIHGQRLSFSVRAKPKDLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARC 92
Query: 418 LDV 426
LD+
Sbjct: 93 LDI 95
>ref|XP_006476695.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Citrus sinensis]
Length = 871
Score = 98.6 bits (244), Expect = 8e-19
Identities = 50/68 (73%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Frame = +1
Query: 226 PIRRADFSGYRR-LISGLAKARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRG 402
P + F+ RR L SG + RAKPKEL+LG+P+VTVEKGKYSYDVETLINKLSSLPPRG
Sbjct: 37 PCTQRIFTSRRRSLTSGTVQVRAKPKELVLGSPTVTVEKGKYSYDVETLINKLSSLPPRG 96
Query: 403 SIARCLDV 426
SIARCLD+
Sbjct: 97 SIARCLDM 104
>ref|XP_006344988.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Solanum tuberosum]
Length = 860
Score = 96.3 bits (238), Expect = 4e-18
Identities = 49/73 (67%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Frame = +1
Query: 214 QFSFPIRRADF---SGYRRLISGLAKARAKPKELILGNPSVTVEKGKYSYDVETLINKLS 384
+F FP + ++ G+ R + RAKPK+LILGNP+VTVEKGKYSYDVETLINKLS
Sbjct: 20 RFLFPTKIPNYYKLPGFHRRLLLTVAVRAKPKDLILGNPTVTVEKGKYSYDVETLINKLS 79
Query: 385 SLPPRGSIARCLD 423
SLPPRGSIARCLD
Sbjct: 80 SLPPRGSIARCLD 92
>ref|XP_007036056.1| Plastid transcriptionally active 2 isoform 3 [Theobroma cacao]
gi|508773301|gb|EOY20557.1| Plastid transcriptionally
active 2 isoform 3 [Theobroma cacao]
Length = 811
Score = 96.3 bits (238), Expect = 4e-18
Identities = 47/55 (85%), Positives = 49/55 (89%)
Frame = +1
Query: 262 LISGLAKARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDV 426
L G RAKP+EL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDV
Sbjct: 39 LSGGAGICRAKPRELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDV 93
>ref|XP_007036055.1| Plastid transcriptionally active 2 isoform 2 [Theobroma cacao]
gi|508773300|gb|EOY20556.1| Plastid transcriptionally
active 2 isoform 2 [Theobroma cacao]
Length = 770
Score = 96.3 bits (238), Expect = 4e-18
Identities = 47/55 (85%), Positives = 49/55 (89%)
Frame = +1
Query: 262 LISGLAKARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDV 426
L G RAKP+EL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDV
Sbjct: 39 LSGGAGICRAKPRELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDV 93
>ref|XP_007036054.1| Plastid transcriptionally active 2 isoform 1 [Theobroma cacao]
gi|508773299|gb|EOY20555.1| Plastid transcriptionally
active 2 isoform 1 [Theobroma cacao]
Length = 859
Score = 96.3 bits (238), Expect = 4e-18
Identities = 47/55 (85%), Positives = 49/55 (89%)
Frame = +1
Query: 262 LISGLAKARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDV 426
L G RAKP+EL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDV
Sbjct: 39 LSGGAGICRAKPRELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDV 93
>gb|EXB29767.1| hypothetical protein L484_008930 [Morus notabilis]
Length = 905
Score = 95.5 bits (236), Expect = 7e-18
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = +1
Query: 247 SGYRRLISGLAKARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDV 426
SG RR S RAKPKE+ILGNP+VTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+
Sbjct: 60 SGERRSFS----VRAKPKEVILGNPAVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDI 115
>ref|XP_004508810.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cicer arietinum]
Length = 861
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/48 (93%), Positives = 47/48 (97%)
Frame = +1
Query: 280 KARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD 423
KARAKP+ELILGNPSVTVE GKYSYDVETLIN+LSSLPPRGSIARCLD
Sbjct: 47 KARAKPRELILGNPSVTVESGKYSYDVETLINRLSSLPPRGSIARCLD 94
>ref|XP_006390383.1| hypothetical protein EUTSA_v10018112mg [Eutrema salsugineum]
gi|557086817|gb|ESQ27669.1| hypothetical protein
EUTSA_v10018112mg [Eutrema salsugineum]
Length = 863
Score = 93.6 bits (231), Expect = 3e-17
Identities = 50/86 (58%), Positives = 57/86 (66%), Gaps = 15/86 (17%)
Frame = +1
Query: 214 QFSFPIRRADFSGYRRLISG---------------LAKARAKPKELILGNPSVTVEKGKY 348
Q SF I+ F G RR G K +AK K+L+LGNPSV+VEKGKY
Sbjct: 12 QLSFLIQNTSFVGNRRFADGNRLRFLSGGKRPCSLAGKIKAKTKDLVLGNPSVSVEKGKY 71
Query: 349 SYDVETLINKLSSLPPRGSIARCLDV 426
SYDVE+LINKLSSLPPRGSIARCLD+
Sbjct: 72 SYDVESLINKLSSLPPRGSIARCLDI 97
>ref|XP_006300609.1| hypothetical protein CARUB_v10019779mg [Capsella rubella]
gi|482569319|gb|EOA33507.1| hypothetical protein
CARUB_v10019779mg [Capsella rubella]
Length = 865
Score = 93.6 bits (231), Expect = 3e-17
Identities = 50/87 (57%), Positives = 58/87 (66%), Gaps = 16/87 (18%)
Frame = +1
Query: 214 QFSFPIRRADFSGYRRLISG----------------LAKARAKPKELILGNPSVTVEKGK 345
Q SF I+ + F G RR G K +AK K+L+LGNPSV+VEKGK
Sbjct: 12 QLSFLIQNSSFFGNRRFADGNRLRFLSGGNRRPCSVAGKIKAKTKDLVLGNPSVSVEKGK 71
Query: 346 YSYDVETLINKLSSLPPRGSIARCLDV 426
YSYDVE+LINKLSSLPPRGSIARCLD+
Sbjct: 72 YSYDVESLINKLSSLPPRGSIARCLDI 98
>ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata] gi|297334836|gb|EFH65254.1| hypothetical protein
ARALYDRAFT_476621 [Arabidopsis lyrata subsp. lyrata]
Length = 863
Score = 93.6 bits (231), Expect = 3e-17
Identities = 50/87 (57%), Positives = 58/87 (66%), Gaps = 16/87 (18%)
Frame = +1
Query: 214 QFSFPIRRADFSGYRRLISG----------------LAKARAKPKELILGNPSVTVEKGK 345
Q SF I+ + F G RR G K +AK K+L+LGNPSV+VEKGK
Sbjct: 12 QLSFLIQNSSFIGNRRFADGNRLRFLSGGNRKPSSVAGKIKAKTKDLVLGNPSVSVEKGK 71
Query: 346 YSYDVETLINKLSSLPPRGSIARCLDV 426
YSYDVE+LINKLSSLPPRGSIARCLD+
Sbjct: 72 YSYDVESLINKLSSLPPRGSIARCLDI 98
>gb|EYU42502.1| hypothetical protein MIMGU_mgv1a001452mg [Mimulus guttatus]
Length = 816
Score = 93.2 bits (230), Expect = 3e-17
Identities = 51/64 (79%), Positives = 53/64 (82%)
Frame = +1
Query: 232 RRADFSGYRRLISGLAKARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIA 411
RR RR +S +AKA K KELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIA
Sbjct: 36 RRHHLPILRRSLSVVAKA--KTKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIA 93
Query: 412 RCLD 423
RCLD
Sbjct: 94 RCLD 97
>ref|XP_006843571.1| hypothetical protein AMTR_s00007p00097240 [Amborella trichopoda]
gi|548845939|gb|ERN05246.1| hypothetical protein
AMTR_s00007p00097240 [Amborella trichopoda]
Length = 872
Score = 93.2 bits (230), Expect = 3e-17
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +1
Query: 277 AKARAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD 423
A R KPKE++LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD
Sbjct: 68 AAVRGKPKEMVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD 116