BLASTX nr result

ID: Paeonia24_contig00037863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00037863
         (414 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006375647.1| hypothetical protein POPTR_0014s18610g, part...    82   1e-13
ref|XP_004305774.1| PREDICTED: uncharacterized protein LOC101293...    74   2e-11
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    69   7e-10
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...    67   3e-09
ref|XP_006593017.1| PREDICTED: uncharacterized protein LOC102664...    66   6e-09
gb|AAD17416.1| putative non-LTR retroelement reverse transcripta...    65   8e-09
emb|CAN80532.1| hypothetical protein VITISV_035958 [Vitis vinifera]    65   1e-08
emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]    64   2e-08
ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S...    64   2e-08
emb|CAN74843.1| hypothetical protein VITISV_037042 [Vitis vinifera]    64   2e-08
emb|CAN68860.1| hypothetical protein VITISV_023024 [Vitis vinifera]    64   3e-08
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    63   4e-08
emb|CAN71630.1| hypothetical protein VITISV_015580 [Vitis vinifera]    63   4e-08
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            63   4e-08
gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thal...    62   6e-08
gb|AAF63129.1|AC009526_14 Similar to reverse transcriptase [Arab...    62   6e-08
ref|NP_175044.1| DNAse I-like superfamily protein [Arabidopsis t...    62   6e-08
emb|CAN72279.1| hypothetical protein VITISV_043410 [Vitis vinifera]    62   6e-08
emb|CAN76254.1| hypothetical protein VITISV_025510 [Vitis vinifera]    62   6e-08
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...    62   8e-08

>ref|XP_006375647.1| hypothetical protein POPTR_0014s18610g, partial [Populus
           trichocarpa] gi|550324501|gb|ERP53444.1| hypothetical
           protein POPTR_0014s18610g, partial [Populus trichocarpa]
          Length = 303

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
 Frame = +3

Query: 3   HEKFLDTVVAVWNTTIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLESL 182
           H++FL  V + W++ + GTPMY+LC++LKLL+  LKE N+ +F  IS+RV     +LE L
Sbjct: 166 HDQFLQVVSSCWSSPVYGTPMYILCRRLKLLKGPLKELNRLHFNHISERVSRLESQLEQL 225

Query: 183 Q--LQAVNGDQAVCAAEKVARQDYVDVLRTEQLFFKQKSRNQWM--SDQNTSFFH 335
           Q   Q    +Q + A ++  R     +   E+ FF QK +  ++  SD  + FFH
Sbjct: 226 QNAFQQDRDNQFLFAQDRFLRSKLSSLKFAEKQFFSQKIKCNFLKHSDNGSKFFH 280


>ref|XP_004305774.1| PREDICTED: uncharacterized protein LOC101293221 [Fragaria vesca
           subsp. vesca]
          Length = 461

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 46/136 (33%), Positives = 80/136 (58%), Gaps = 6/136 (4%)
 Frame = +3

Query: 3   HEKFLDTVVAVWNTT-IEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLES 179
           H  F DT+   W ++   G PMYV+ QKLK L+S L+ +NK  FGD+ + V +ARE L +
Sbjct: 119 HPTFRDTIATCWTSSKFWGWPMYVIVQKLKALKSCLRNWNKMVFGDVHQNVNKAREALSA 178

Query: 180 LQLQ-AVNG--DQAVCAAEKVARQDYVDVLRTEQLFFKQKSRNQWMS--DQNTSFFHEDA 344
           +Q   A++G  DQ     E  A+   ++ ++ ++ ++K ++R +W++  D++TSFFH  A
Sbjct: 179 IQQDIAIHGMTDQKF-EDEVDAKFRVLNAVKMQESYWKDRARVKWLTDGDRSTSFFHAYA 237

Query: 345 SRRCPD*KGINVPKGK 392
             R    +  ++  G+
Sbjct: 238 KVRSASARMFSIHDGE 253


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
 Frame = +3

Query: 3   HEKFLDTVVAVWNT-TIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLES 179
           H +F++ +   W+    +G+ M+ L +K K L+  ++ FN+ ++  + KRVV+A + L++
Sbjct: 256 HPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYSGLEKRVVQAAQNLKT 315

Query: 180 LQLQAVNGDQAVCAA-EKVARQDYVDVLRTEQLFFKQKSRNQWM--SDQNTSFFHEDASR 350
            Q   +    +  A  EK A + + ++   E+ F  QKSR  W+   D NT+FFH   + 
Sbjct: 316 CQNNLLAAPSSYLAGLEKEAHRSWAELALAEERFLCQKSRVLWLKCGDSNTTFFHRMMTA 375

Query: 351 R 353
           R
Sbjct: 376 R 376


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
 Frame = +3

Query: 9   KFLDTVVAVW-NTTIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLESLQ 185
           +FL+ V  VW +T + G+ M+ + +KLK L+  +K+F++  + ++ KR  EA E L S Q
Sbjct: 252 EFLNLVWDVWYSTNVVGSSMFRVSKKLKALKKPIKDFSRLNYSNLEKRTEEAHETLLSFQ 311

Query: 186 LQAVNGDQAVCAAEKVARQDYVDVLRT-EQLFFKQKSRNQWMS--DQNTSFFHEDASRR 353
              ++      AA ++  Q    +L T E+ FF+Q+SR  W +  D NT +FH  A  R
Sbjct: 312 NLTLDNPSLENAAHELEAQRKWQILATAEESFFRQRSRVTWFAEGDGNTRYFHRMADSR 370


>ref|XP_006593017.1| PREDICTED: uncharacterized protein LOC102664356 [Glycine max]
          Length = 208

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 7/134 (5%)
 Frame = +3

Query: 12  FLDTVVAVWNT-TIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLESLQL 188
           F + V  +WN+  ++G   YVL +K+KLL+ +LK++NK  FG++ K+  +   K+  L L
Sbjct: 48  FKEKVAWMWNSYEVQGRGAYVLKEKIKLLKKDLKQWNKESFGNLQKQSKDLVAKINLLDL 107

Query: 189 QAVNGD--QAVCAAEKVARQDYVDVLRTEQLFFKQKSRNQWM--SDQNTSFFHE--DASR 350
           +  NG   Q    + +    +Y  + R  +    QKSR++W+   D NT FF    +  R
Sbjct: 108 KGENGSLLQEEMDSRRFYVGEYWKIARRNESLLPQKSRSRWIKEGDGNTKFFRGVINWKR 167

Query: 351 RCPD*KGINVPKGK 392
           R  + KGI++ KG+
Sbjct: 168 RKNNIKGISI-KGR 180


>gb|AAD17416.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 444

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
 Frame = +3

Query: 3   HEKFLDTVVAVW-NTTIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEARE-KLE 176
           +E+FL+ V+  W +T + G+ M+ + +KLK L+  +K+F++  +  I  R  EA E  L 
Sbjct: 84  NEEFLNVVIENWYSTNVVGSHMFRVSKKLKALKKPIKDFSRLNYSGIELRTKEAHEWFLR 143

Query: 177 SLQLQAVNGDQAVCAAEKVARQDYVDVLRTEQLFFKQKSRNQWMS--DQNTSFFHEDASR 350
              L   N      A E  A++ ++ +   E+ FF Q+SR  W +  D NTS+FH  A  
Sbjct: 144 RQDLTLANASDLNAALELEAQRKWLLLSSAEESFFHQRSRVSWFAEGDSNTSYFHRMADS 203

Query: 351 R 353
           R
Sbjct: 204 R 204


>emb|CAN80532.1| hypothetical protein VITISV_035958 [Vitis vinifera]
          Length = 1287

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
 Frame = +3

Query: 6   EKFLDTVVAVWN-TTIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLESL 182
           E F D +   W    + G+P Y L  KLK L+  LK +NK  FG + +   EA +++E  
Sbjct: 498 EGFKDLIGGWWQGIVVRGSPNYRLAIKLKGLKQILKIWNKEVFGSLERNKAEAFQQVERW 557

Query: 183 QLQAVNGDQAVCAAE----KVARQDYVDVLRTEQLFFKQKSRNQWM--SDQNTSFFHEDA 344
            L  V G++++   E    K A++DY   +  E++ ++Q SR  W+   D+NT FFH  A
Sbjct: 558 DL--VEGERSLTEEELCRKKEAKEDYAKWVSLEEIHWRQLSRELWLREGDRNTGFFHRMA 615

Query: 345 S 347
           +
Sbjct: 616 N 616


>emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]
          Length = 945

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
 Frame = +3

Query: 45  TIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKR---------VVEAREKLESLQLQAV 197
           +  G+  +VL +K+K+L+++LKE+N+  FG I  R           +AREK+  L L+ +
Sbjct: 20  SFSGSASFVLAEKIKVLKAKLKEWNRESFGRIELRKNVALEQVQFWDAREKISRLNLEEL 79

Query: 198 NGDQAVCAAEKVARQDYVDVLRTEQLFFKQKSRNQWM--SDQNTSFFHEDAS 347
                   A K AR+DY   +  E++ ++QKSR  W+   D+NT +FH+ A+
Sbjct: 80  E-------ARKEAREDYKKWVLFEEISWRQKSREVWLKEGDRNTGYFHKMAN 124


>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
           gi|241936686|gb|EES09831.1| hypothetical protein
           SORBIDRAFT_05g019526 [Sorghum bicolor]
          Length = 1209

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
 Frame = +3

Query: 3   HEKFLDTVVAVWNTTIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLESL 182
           HE F + +   W    + T  + L  KL+ +  +L  +  R FG +S+ +   R +LE +
Sbjct: 517 HEDFANVISQTWQRGTKATTAHELQSKLRSVSCKLNHWEVRTFGQVSRELKGLRRELEMM 576

Query: 183 QLQAVNGDQAVCAAEKVARQDYVDVLRTEQLFFKQKSRNQWMS--DQNTSFFHEDASRR 353
           Q       Q     E   ++  +++   E+L +KQ++R QW+S  D+NT FFH  ASRR
Sbjct: 577 QADV--NRQGPSHVELKIKERIMELNHREELMWKQRARIQWLSAGDKNTHFFHLRASRR 633


>emb|CAN74843.1| hypothetical protein VITISV_037042 [Vitis vinifera]
          Length = 1296

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
 Frame = +3

Query: 6   EKFLDTVVAVWNT-TIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLESL 182
           + F D V + WN  ++EG+  + + +KLK L+ +LK +NK   G++S    EA  +L+  
Sbjct: 334 DXFQDLVRSWWNGYSVEGSSSHCIAEKLKALKKDLKNWNKEVIGNVSLNRAEAFSRLQRW 393

Query: 183 QLQAVNGDQAVCAAE----KVARQDYVDVLRTEQLFFKQKSRNQWM--SDQNTSFFHEDA 344
           + +    D  + A+E     +A +DY      E+  ++QKSR  W+   D+NT +FH+ A
Sbjct: 394 ETR--ENDSPLTASEVEAKNLALEDYKKWALLEETSWRQKSREIWLKEGDKNTKYFHKMA 451

Query: 345 SRR 353
           + R
Sbjct: 452 NAR 454


>emb|CAN68860.1| hypothetical protein VITISV_023024 [Vitis vinifera]
          Length = 1795

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 39/121 (32%), Positives = 67/121 (55%), Gaps = 7/121 (5%)
 Frame = +3

Query: 12   FLDTVVAVWNT-TIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLESLQL 188
            F D V + WN  ++EG+  + + +KLK L+ +LK +NK   G++S    EA  +L+  + 
Sbjct: 835  FQDLVRSWWNGYSVEGSSSHCIAEKLKALKKDLKNWNKEVIGNVSLNRAEAFSRLQRWET 894

Query: 189  QAVNGDQAVCAAE----KVARQDYVDVLRTEQLFFKQKSRNQWM--SDQNTSFFHEDASR 350
            +    D  + A+E     +A +DY      E+  ++QKSR  W+   D+NT +FH+ A+ 
Sbjct: 895  R--ENDSPLTASEVXAKNLALEDYKKWALLEETSWRQKSREIWLKEGDKNTKYFHKMANA 952

Query: 351  R 353
            R
Sbjct: 953  R 953


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
 Frame = +3

Query: 3   HEKFLDTVVAVW-NTTIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLES 179
           +E FL+ V+  W +T + G+ MY + +KLK ++  +K+F++  +  I  R  EA E L +
Sbjct: 118 NEDFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLIT 177

Query: 180 LQ-LQAVNGDQAVCAAEKVARQDYVDVLRTEQLFFKQKSRNQWMS--DQNTSFFHEDASR 350
            Q L   N   +  A E  A++ +V +   E+ FF Q+SR  W +  D NT +FH     
Sbjct: 178 CQNLTLANPSVSNAALELEAQRKWVLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVDS 237

Query: 351 R 353
           R
Sbjct: 238 R 238


>emb|CAN71630.1| hypothetical protein VITISV_015580 [Vitis vinifera]
          Length = 1742

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
 Frame = +3

Query: 45  TIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKR---------VVEAREKLESLQLQAV 197
           +  G+  ++L +K+K+L+ +LKE+N+  FG I  R           +AREK+  L L+ +
Sbjct: 665 SFNGSASFILAEKIKVLKVKLKEWNRDSFGXIELRKNAALEQVQFWDAREKISRLNLEEL 724

Query: 198 NGDQAVCAAEKVARQDYVDVLRTEQLFFKQKSRNQWM--SDQNTSFFHEDAS 347
                   A K AR+DY   +  E++ ++QKSR  W+   D+NT +FH+ A+
Sbjct: 725 E-------ARKEAREDYKKWVLLEEISWRQKSREXWLKEGDRNTGYFHKMAN 769


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
 Frame = +3

Query: 3   HEKFLDTVVAVW-NTTIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLES 179
           +E FL+ V+  W +T + G+ MY + +KLK ++  +K+F++  +  I  R  EA E L +
Sbjct: 118 NEDFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLIT 177

Query: 180 LQ-LQAVNGDQAVCAAEKVARQDYVDVLRTEQLFFKQKSRNQWMS--DQNTSFFHEDASR 350
            Q L   N   +  A E  A++ +V +   E+ FF Q+SR  W +  D NT +FH     
Sbjct: 178 CQNLTLANPSVSNAALELEAQRKWVLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVDS 237

Query: 351 R 353
           R
Sbjct: 238 R 238


>gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 668

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
 Frame = +3

Query: 3   HEKFLDTVVAVWNTTIE-GTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLES 179
           H  FL ++   W   I  G+ M+ L + LK  +   K  N++ FG+I  +  EA + LES
Sbjct: 277 HPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLES 336

Query: 180 LQLQAV-NGDQAVCAAEKVARQDYVDVLRTEQLFFKQKSRNQWM--SDQNTSFFHE 338
           +Q Q + N   ++   E VAR+ +       + F++QKSR +W+   D NT FFH+
Sbjct: 337 IQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHK 392


>gb|AAF63129.1|AC009526_14 Similar to reverse transcriptase [Arabidopsis thaliana]
          Length = 602

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
 Frame = +3

Query: 3   HEKFLDTVVAVWNTTIE-GTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLES 179
           H  FL ++   W   I  G+ M+ L + LK  +   K  N++ FG+I  +  EA + LES
Sbjct: 277 HPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLES 336

Query: 180 LQLQAV-NGDQAVCAAEKVARQDYVDVLRTEQLFFKQKSRNQWM--SDQNTSFFHE 338
           +Q Q + N   ++   E VAR+ +       + F++QKSR +W+   D NT FFH+
Sbjct: 337 IQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHK 392


>ref|NP_175044.1| DNAse I-like superfamily protein [Arabidopsis thaliana]
           gi|332193872|gb|AEE31993.1| DNAse I-like superfamily
           protein [Arabidopsis thaliana]
          Length = 626

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
 Frame = +3

Query: 3   HEKFLDTVVAVWNTTIE-GTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLES 179
           H  FL ++   W   I  G+ M+ L + LK  +   K  N++ FG+I  +  EA + LES
Sbjct: 341 HPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLES 400

Query: 180 LQLQAV-NGDQAVCAAEKVARQDYVDVLRTEQLFFKQKSRNQWM--SDQNTSFFHE 338
           +Q Q + N   ++   E VAR+ +       + F++QKSR +W+   D NT FFH+
Sbjct: 401 IQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHK 456


>emb|CAN72279.1| hypothetical protein VITISV_043410 [Vitis vinifera]
          Length = 1454

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 13/116 (11%)
 Frame = +3

Query: 45   TIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKR---------VVEAREKLESLQLQAV 197
            +  G+P ++L +KLK L+ +LKE+N+  FG +  +           +A+EK+  L L+ +
Sbjct: 731  SFSGSPSFILAEKLKFLKVKLKEWNRNTFGRVEYKKNLALEQIEFWDAKEKISRLSLEEL 790

Query: 198  NGDQAVCAAEKVARQDYVDVLRTEQLFFKQKSRNQWM--SDQNTSFFHE--DASRR 353
                    A   AR+DY   +  E++  +QKSR  W+   D+NT FFH+  +A RR
Sbjct: 791  E-------ARNEAREDYKKWVLLEEITLRQKSREVWLKEGDRNTGFFHKMVNAHRR 839


>emb|CAN76254.1| hypothetical protein VITISV_025510 [Vitis vinifera]
          Length = 895

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
 Frame = +3

Query: 42  TTIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKLESLQLQAVNGDQAVCA 221
           ++  G+P ++  +KLK L+++LKE+N   FG       +A+EK+  L L+ +        
Sbjct: 494 SSFSGSPSFIFAEKLKFLKAKLKEWNGNTFGR-HMEFWDAKEKISRLSLEELE------- 545

Query: 222 AEKVARQDYVDVLRTEQLFFKQKSRNQWM--SDQNTSFFHE 338
           A   AR+DY   +  E++ ++QKSR  W+   D+NT FFH+
Sbjct: 546 ARDEAREDYKKWVGLEEIMWRQKSREVWLKEGDRNTDFFHK 586


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
           [Arabidopsis thaliana]
          Length = 1164

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
 Frame = +3

Query: 6   EKFLDTVVAVW-NTTIEGTPMYVLCQKLKLLRSELKEFNKRYFGDISKRVVEAREKL--- 173
           E FL  +   W +T++ G+ MY +  KLK L+  +++F++  + DI KR  EA + L   
Sbjct: 156 ENFLSLICLKWFSTSVTGSAMYRVSVKLKALKKVIRDFSRDNYSDIEKRTKEAHDALLLA 215

Query: 174 ESLQLQAVNGDQAVCAAEKVARQDYVDVLRTEQLFFKQKSRNQWM--SDQNTSFFHEDAS 347
           +S+ L +     A   AE   ++ +  +   E  FF Q+SR  W+   D N+S+FH+ AS
Sbjct: 216 QSVLLASPCPSNAAIEAE--TQRKWRILAEAEASFFYQRSRVNWLREGDMNSSYFHKMAS 273

Query: 348 RR 353
            R
Sbjct: 274 AR 275


Top