BLASTX nr result

ID: Paeonia24_contig00037830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00037830
         (297 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK91878.1|AC091665_4 Putative copia-type pol polyprotein [Or...    57   3e-06
emb|CAE05263.2| OSJNBb0115I09.25 [Oryza sativa Japonica Group] g...    57   4e-06

>gb|AAK91878.1|AC091665_4 Putative copia-type pol polyprotein [Oryza sativa]
            gi|31430163|gb|AAP52115.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1225

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/40 (65%), Positives = 29/40 (72%)
 Frame = +2

Query: 98   KDTFKPREDGEEVHDPKIPYLSVIGASSYLAQCTYSNIVF 217
            KD FKP+ED EEV  P++PYLS IGA  YLA CT  NI F
Sbjct: 970  KDPFKPKEDDEEVLGPEVPYLSAIGALMYLANCTRPNIAF 1009


>emb|CAE05263.2| OSJNBb0115I09.25 [Oryza sativa Japonica Group]
            gi|38347029|emb|CAD39881.2| OSJNBb0067G11.4 [Oryza sativa
            Japonica Group]
          Length = 986

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 26/40 (65%), Positives = 30/40 (75%)
 Frame = +2

Query: 98   KDTFKPREDGEEVHDPKIPYLSVIGASSYLAQCTYSNIVF 217
            KD FKP+ED EEV  P++PYLS IGA  YLA CT  +IVF
Sbjct: 885  KDPFKPKEDDEEVLGPEVPYLSAIGALMYLANCTRPDIVF 924


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