BLASTX nr result

ID: Paeonia24_contig00034272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00034272
         (422 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004305178.1| PREDICTED: putative ribonuclease H protein A...    40   8e-07
ref|XP_007217546.1| hypothetical protein PRUPE_ppa022869mg [Prun...    40   4e-06
ref|XP_004308226.1| PREDICTED: putative ribonuclease H protein A...    40   5e-06
ref|XP_004308642.1| PREDICTED: putative ribonuclease H protein A...    40   6e-06
ref|XP_007207609.1| hypothetical protein PRUPE_ppa018907mg, part...    38   8e-06

>ref|XP_004305178.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 305

 Score = 40.0 bits (92), Expect(2) = 8e-07
 Identities = 17/59 (28%), Positives = 32/59 (54%)
 Frame = -2

Query: 202 LKGIRRWSLEVLKSVSHTPWSTQKLKEDTLLFWKDFKEVMLGHIYRETNRTADAITKFG 26
           ++G  +  ++++  V   PW   K+ +D  L   +FK + L H++RE N  A+A+   G
Sbjct: 211 VEGDSKLIIDIMNGVCDPPWRLLKVVKDIKLLSCNFKSIRLKHVFREANFVANALANLG 269



 Score = 38.5 bits (88), Expect(2) = 8e-07
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
 Frame = -1

Query: 392 NFSKLNFDGSRGLIGLVRGNFVLGSSDNIP-TARAFHLGAVPINVAAC---RAGIIQARK 225
           N+ K+NFDGS        G FVL S D  P  + AF+ G   + +A     R  ++ A++
Sbjct: 145 NWVKINFDGSVQNKAAA-GGFVLRSDDGKPLVSAAFNSGTASVPLAEALEFRNSLLCAKE 203

Query: 224 MCIDKLYIEGDSKVVI 177
             + K+ +EGDSK++I
Sbjct: 204 KGVLKVEVEGDSKLII 219


>ref|XP_007217546.1| hypothetical protein PRUPE_ppa022869mg [Prunus persica]
           gi|462413696|gb|EMJ18745.1| hypothetical protein
           PRUPE_ppa022869mg [Prunus persica]
          Length = 137

 Score = 39.7 bits (91), Expect(2) = 4e-06
 Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
 Frame = -1

Query: 380 LNFDGSRGLIGLVRGNFVLGS-SDNIPTARAFHLGAVPINVAAC---RAGIIQARKMCID 213
           +NFDGS     +   +FV+   + N+  ARA +LG V INVA C   R G+  A      
Sbjct: 9   VNFDGSVH-DNMAATSFVIRDWNGNVRLARAKNLGQVLINVAECLAIRDGLAHAINNGWR 67

Query: 212 KLYIEGDSKVVI 177
           K+ IEGDSK+VI
Sbjct: 68  KVLIEGDSKLVI 79



 Score = 36.6 bits (83), Expect(2) = 4e-06
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -2

Query: 202 LKGIRRWSLEVLKSVSHTPWSTQKLKEDTLLFWKDFKEVMLGHIYRETNRTADAITKFG 26
           ++G  +  ++ + +    PWS + L +D  L     +E+   H++RE N T DA+   G
Sbjct: 71  IEGDSKLVIDCINNKVSVPWSIRLLVQDIRLLSSYCEEISFHHVFREANFTTDALANLG 129


>ref|XP_004308226.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 179

 Score = 39.7 bits (91), Expect(2) = 5e-06
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
 Frame = -1

Query: 392 NFSKLNFDGSRGLIGLVRGNFVLGSSDNIP-TARAFHLGAVPINVA---ACRAGIIQARK 225
           N+ K+NFDGS       RG FVL S D  P  + AF+ G   + +A   A R  +  A++
Sbjct: 19  NWVKINFDGSVRNKAAARG-FVLRSDDGKPLVSAAFNSGNASVPLAEALALRNSLFCAKE 77

Query: 224 MCIDKLYIEGDSKVVI 177
             + K+ +EGDSK++I
Sbjct: 78  KGVLKVEMEGDSKLII 93



 Score = 36.2 bits (82), Expect(2) = 5e-06
 Identities = 14/59 (23%), Positives = 31/59 (52%)
 Frame = -2

Query: 202 LKGIRRWSLEVLKSVSHTPWSTQKLKEDTLLFWKDFKEVMLGHIYRETNRTADAITKFG 26
           ++G  +  ++++  V   PW   K+ +D  L   +F+ +   H+++E N  A+A+   G
Sbjct: 85  MEGDSKLIIDIVNGVCDPPWRLLKVVQDIKLLSCNFESIRFKHVFKEANFVANALANLG 143


>ref|XP_004308642.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 214

 Score = 40.0 bits (92), Expect(2) = 6e-06
 Identities = 17/67 (25%), Positives = 32/67 (47%)
 Frame = -2

Query: 202 LKGIRRWSLEVLKSVSHTPWSTQKLKEDTLLFWKDFKEVMLGHIYRETNRTADAITKFGP 23
           ++G  +  ++V+    + PW   ++ +D     + F  +   H+YRE N  ADA+  +G 
Sbjct: 148 VEGDSKLVIDVMTQKINPPWRIHQIVDDIRKIAESFSSISFHHVYREANFAADAVVSYGH 207

Query: 22  TNVCNNV 2
            N    V
Sbjct: 208 QNSSGRV 214



 Score = 35.4 bits (80), Expect(2) = 6e-06
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
 Frame = -1

Query: 383 KLNFDGSRGLIGLVRGNFVLGSSDNIPTARAFHLGAVPINVA---ACRAGIIQARKMCID 213
           K+NFDGS        G  +  S  N   A   +LG+  + VA   A R  ++  ++    
Sbjct: 85  KINFDGSVSSNSAASGAIIRDSKGNPILASTRNLGSTSVPVAEATALRDSLLSVKEKGFI 144

Query: 212 KLYIEGDSKVVI 177
            + +EGDSK+VI
Sbjct: 145 DVVVEGDSKLVI 156


>ref|XP_007207609.1| hypothetical protein PRUPE_ppa018907mg, partial [Prunus persica]
            gi|462403251|gb|EMJ08808.1| hypothetical protein
            PRUPE_ppa018907mg, partial [Prunus persica]
          Length = 1566

 Score = 37.7 bits (86), Expect(2) = 8e-06
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = -2

Query: 202  LKGIRRWSLEVLKSVSHTPWSTQKLKEDTLLFWKDFKEVMLGHIYRETNRTADAITKFG 26
            ++G  +  ++ + ++   PWS   L +D  L     +E+   HI+RE N TADA+   G
Sbjct: 1474 VEGDSKLIIDCVNNLVSVPWSISLLVQDIRLLSFYCEEISFKHIFREANFTADAVASLG 1532



 Score = 37.4 bits (85), Expect(2) = 8e-06
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -1

Query: 383  KLNFDGS-RGLIGLVRGNFVLGS-SDNIPTARAFHLGAVPINVAAC---RAGIIQARKMC 219
            K+NFDGS RG   L    FV+   + N+  A   + G V I VA C   R G+  A    
Sbjct: 1411 KVNFDGSMRG--NLAATGFVIRDWNGNVRLAGTKNSGQVSITVAECFALRDGLAHAIHKG 1468

Query: 218  IDKLYIEGDSKVVI 177
              K+++EGDSK++I
Sbjct: 1469 WRKIFVEGDSKLII 1482


Top