BLASTX nr result
ID: Paeonia24_contig00033699
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00033699
(592 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ... 296 4e-78
gb|ABW74585.1| pol polyprotein [Boechera divaricarpa] 266 4e-69
dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis t... 248 7e-64
gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsi... 246 3e-63
pir||E84492 probable retroelement pol polyprotein [imported] - A... 239 6e-61
gb|AAM15219.1| putative retroelement pol polyprotein [Arabidopsi... 239 6e-61
gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein ... 229 6e-58
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g... 206 3e-51
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi... 206 3e-51
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group] 205 9e-51
gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subc... 204 2e-50
gb|AAP12935.1| retrotransposon protein, putative, unclassified [... 204 2e-50
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]... 198 8e-49
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 197 1e-48
gb|ABB47537.2| retrotransposon protein, putative, unclassified [... 197 2e-48
gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Ja... 197 2e-48
gb|AAZ66952.1| 117M18_33 [Brassica rapa] 196 4e-48
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 196 5e-48
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 194 2e-47
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 194 2e-47
>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
Length = 1239
Score = 296 bits (757), Expect = 4e-78
Identities = 138/197 (70%), Positives = 168/197 (85%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSGRLLVKVTR 413
+F++KT EQKL+ +IYYIPEL+SNILSLGQATE GCDVRMK +YLT+ DPSGRLLVKV R
Sbjct: 246 IFEAKTGEQKLLTNIYYIPELRSNILSLGQATEQGCDVRMKDNYLTLRDPSGRLLVKVLR 305
Query: 412 SPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGEN 233
SPNRLYKVSL++GKP CL + +E WRWHARLGH++FKT++ M++ EMV+GLP+I E
Sbjct: 306 SPNRLYKVSLKVGKPSCLLTKINEEPWRWHARLGHINFKTIKDMAKLEMVRGLPEINEEK 365
Query: 232 RICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSRY 53
++CESCLVGKQ R SFP A R+++ LELLHADLCGPISP T+A NRY+FVIIDD +RY
Sbjct: 366 KLCESCLVGKQTRNSFPSATPHRSSQVLELLHADLCGPISPSTLAQNRYIFVIIDDNTRY 425
Query: 52 MWTILMKEKGEVFGKFK 2
MW+IL+KEK EVF KFK
Sbjct: 426 MWSILLKEKSEVFEKFK 442
>gb|ABW74585.1| pol polyprotein [Boechera divaricarpa]
Length = 551
Score = 266 bits (679), Expect = 4e-69
Identities = 121/171 (70%), Positives = 149/171 (87%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSGRLLVKVTR 413
LFQ KT EQ+LV DIYYIP+LKSNILSLGQATE GCDVR++ DYLT+HDP GRLLVKV R
Sbjct: 377 LFQGKTGEQQLVIDIYYIPDLKSNILSLGQATEFGCDVRIRHDYLTLHDPHGRLLVKVIR 436
Query: 412 SPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGEN 233
SPNRLYK++L+IGKP+CLH +E +TWRWHARLGH++FKT++ MS+QEMV GLP+I+ E
Sbjct: 437 SPNRLYKINLKIGKPICLHTKIEGDTWRWHARLGHINFKTIKDMSKQEMVYGLPEIEEEK 496
Query: 232 RICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVF 80
++CE CLVGKQ R +FPK +RA++ LELL+ADLCGPISPP++A NRY+F
Sbjct: 497 QVCEPCLVGKQTRQAFPKTTLYRASRVLELLYADLCGPISPPSLAQNRYIF 547
>dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1250
Score = 248 bits (634), Expect = 7e-64
Identities = 112/197 (56%), Positives = 156/197 (79%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSGRLLVKVTR 413
LF SK +E+K++ D+Y+IP+LKSNI+SLGQATE+GC+VRMK D L +HD G+LLVK R
Sbjct: 283 LFISKNKEKKILADVYFIPDLKSNIISLGQATESGCEVRMKDDLLIMHDKDGKLLVKANR 342
Query: 412 SPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGEN 233
S NRLYKV + I P CL A++ + +WH+RLGH+ +T++ M ++++V G+P+++ +
Sbjct: 343 SKNRLYKVLMEIEPPKCLQAMVLSNSAKWHSRLGHIGVETLKTMVKKDLVIGMPQMEVDK 402
Query: 232 RICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSRY 53
C SCL+GKQV SFP+A+++RAT++LEL+H DLCGPI+PPT A NRY+FV+IDD SRY
Sbjct: 403 ETCASCLLGKQVSKSFPQASSYRATQNLELIHGDLCGPITPPTSARNRYIFVLIDDHSRY 462
Query: 52 MWTILMKEKGEVFGKFK 2
MW+IL+KEK E F K K
Sbjct: 463 MWSILLKEKNEPFEKSK 479
>gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1200
Score = 246 bits (629), Expect = 3e-63
Identities = 113/197 (57%), Positives = 146/197 (74%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSGRLLVKVTR 413
LF +K E K + ++YYIP+LKSNI+SLGQATEAGCDVR+K +YLT+HD G LLVK TR
Sbjct: 302 LFLTKNGEPKTLANVYYIPDLKSNIISLGQATEAGCDVRLKDNYLTLHDRDGNLLVKATR 361
Query: 412 SPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGEN 233
S NRLY+V L++ CL ++ +WHARLGH++ +T++ M +E V G+P E
Sbjct: 362 SRNRLYRVELKVKNTKCLQLAALNDLTKWHARLGHINLETIKAMVTKEFVIGIPSAPKEK 421
Query: 232 RICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSRY 53
IC SC++GKQ R FPKA T+RA++ LEL+H DLCGPISPPT A RY+ V+IDD SR+
Sbjct: 422 EICASCMLGKQARQVFPKATTYRASQILELIHGDLCGPISPPTAAKRRYILVLIDDHSRF 481
Query: 52 MWTILMKEKGEVFGKFK 2
MW+ L+KEK E FGKFK
Sbjct: 482 MWSFLLKEKSEAFGKFK 498
>pir||E84492 probable retroelement pol polyprotein [imported] - Arabidopsis
thaliana
Length = 531
Score = 239 bits (609), Expect = 6e-61
Identities = 107/188 (56%), Positives = 143/188 (76%)
Frame = -1
Query: 565 KLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSGRLLVKVTRSPNRLYKVS 386
+++ D+Y+IPELKSNI+SLGQATE+GC++++K YLT+HD G+LLVK RS N LYKV
Sbjct: 226 RVMLDVYFIPELKSNIISLGQATESGCEIKLKDGYLTMHDQEGKLLVKAERSRNSLYKVK 285
Query: 385 LRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGENRICESCLVG 206
+ + K CL+ + WHAR+GHVS T++ M +E++QG P + E+ +C SCL+G
Sbjct: 286 MGLRKEACLYLTSTSMSSLWHARMGHVSLITLKSMIDKELIQGAPSLVIESEVCGSCLLG 345
Query: 205 KQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSRYMWTILMKEK 26
KQ R SFP+A FRATK LEL+H DLCGPI+P T NRY+FV+IDD+SRYMWT+L+KEK
Sbjct: 346 KQTRQSFPQATVFRATKKLELIHGDLCGPITPKTSVGNRYIFVLIDDYSRYMWTVLLKEK 405
Query: 25 GEVFGKFK 2
G+ F KFK
Sbjct: 406 GDAFFKFK 413
>gb|AAM15219.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 767
Score = 239 bits (609), Expect = 6e-61
Identities = 107/188 (56%), Positives = 143/188 (76%)
Frame = -1
Query: 565 KLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSGRLLVKVTRSPNRLYKVS 386
+++ D+Y+IPELKSNI+SLGQATE+GC++++K YLT+HD G+LLVK RS N LYKV
Sbjct: 123 RVMLDVYFIPELKSNIISLGQATESGCEIKLKDGYLTMHDQEGKLLVKAERSRNSLYKVK 182
Query: 385 LRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGENRICESCLVG 206
+ + K CL+ + WHAR+GHVS T++ M +E++QG P + E+ +C SCL+G
Sbjct: 183 MGLRKEACLYLTSTSMSSLWHARMGHVSLITLKSMIDKELIQGAPSLVIESEVCGSCLLG 242
Query: 205 KQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSRYMWTILMKEK 26
KQ R SFP+A FRATK LEL+H DLCGPI+P T NRY+FV+IDD+SRYMWT+L+KEK
Sbjct: 243 KQTRQSFPQATVFRATKKLELIHGDLCGPITPKTSVGNRYIFVLIDDYSRYMWTVLLKEK 302
Query: 25 GEVFGKFK 2
G+ F KFK
Sbjct: 303 GDAFFKFK 310
>gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1150
Score = 229 bits (583), Expect = 6e-58
Identities = 111/190 (58%), Positives = 139/190 (73%)
Frame = -1
Query: 571 EQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSGRLLVKVTRSPNRLYK 392
+Q+ V ++Y+I +LKSNI+SLGQATE+GC++ MK D LT+HD G+LLVK RS N LYK
Sbjct: 228 DQQKVSNVYFILDLKSNIISLGQATESGCNITMKGDQLTMHDRDGKLLVKACRSKNHLYK 287
Query: 391 VSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGENRICESCL 212
V + I LH E+ RWHARLGHV+F T++ M Q+E+VQG + +C SCL
Sbjct: 288 VRMGIKGATRLHLTTISESSRWHARLGHVNFDTIKSMMQKELVQGFSLGSIKKELCSSCL 347
Query: 211 VGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSRYMWTILMK 32
+GKQ R +FPKA FRA K LEL+H DLCGPI+P T A NRYVFV+IDD SRYMWTIL+K
Sbjct: 348 LGKQTRLAFPKATLFRAAKILELVHGDLCGPITPSTAAGNRYVFVLIDDHSRYMWTILLK 407
Query: 31 EKGEVFGKFK 2
EK E F KF+
Sbjct: 408 EKSEAFNKFR 417
>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1427
Score = 206 bits (525), Expect = 3e-51
Identities = 99/201 (49%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSG-RLLVKVT 416
LF K +Q L+ D++YIP L N++SLGQ TE G V M +D L V D S RL+++V
Sbjct: 406 LFSCKNGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVR 465
Query: 415 RSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGE 236
R+PNRLY++ L++ P+CL +++ W WHARLGHV+F+ M+ ++ + M G+P I
Sbjct: 466 RTPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHP 525
Query: 235 NRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSR 56
N++C++CLV KQ+R FP A FRA + LELLH DLCGPI+P T+A NRY +I+DDFSR
Sbjct: 526 NQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSR 585
Query: 55 YMWTILMKEKG---EVFGKFK 2
+MW ++K K E F KFK
Sbjct: 586 WMWMFVIKTKDQALEAFTKFK 606
>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
Length = 1427
Score = 206 bits (525), Expect = 3e-51
Identities = 99/201 (49%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSG-RLLVKVT 416
LF K +Q L+ D++YIP L N++SLGQ TE G V M +D L V D S RL+++V
Sbjct: 406 LFSCKNGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVR 465
Query: 415 RSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGE 236
R+PNRLY++ L++ P+CL +++ W WHARLGHV+F+ M+ ++ + M G+P I
Sbjct: 466 RTPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHP 525
Query: 235 NRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSR 56
N++C++CLV KQ+R FP A FRA + LELLH DLCGPI+P T+A NRY +I+DDFSR
Sbjct: 526 NQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSR 585
Query: 55 YMWTILMKEKG---EVFGKFK 2
+MW ++K K E F KFK
Sbjct: 586 WMWMFVIKTKDQALEAFTKFK 606
>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
Length = 893
Score = 205 bits (521), Expect = 9e-51
Identities = 101/201 (50%), Positives = 135/201 (67%), Gaps = 4/201 (1%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSG-RLLVKVT 416
LF K +Q L+ D+YYIP L N++SLGQ TE G V M D L V D + RL++KV
Sbjct: 219 LFSCKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVVMDGDDLEVFDKNPWRLVMKVR 278
Query: 415 RSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGE 236
R+ NRLY++ L++ P+CL A L+D W WHARLGHV+F ++ + +EMV G+P +
Sbjct: 279 RTSNRLYRIELQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMVAGVPAVHHP 338
Query: 235 NRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSR 56
N++C++CLV KQVR SFP A +RA LELLH DLCGPI+P T A NRY +I+DDFSR
Sbjct: 339 NQLCQACLVAKQVRQSFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFMLIVDDFSR 398
Query: 55 YMWTILMKEKGEVFG---KFK 2
+MW ++K K + KFK
Sbjct: 399 WMWVFVIKSKDQALAASEKFK 419
>gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 204 bits (519), Expect = 2e-50
Identities = 99/201 (49%), Positives = 136/201 (67%), Gaps = 4/201 (1%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSG-RLLVKVT 416
LF K +Q L+ D+YYIP L N++SLGQ TE G V M D L V D + RL++KV
Sbjct: 399 LFACKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVVMDNDDLEVFDKNPWRLVIKVR 458
Query: 415 RSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGE 236
R+ NRLY++ L++ P+CL L D W WHARLGHV+F+T++ + +EM G+P++
Sbjct: 459 RTSNRLYRIELQLASPVCLLTSLGDPAWLWHARLGHVNFQTLKLLVDKEMAAGVPQVHHP 518
Query: 235 NRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSR 56
N++C++CL+ KQ+R FP A +RA LELLH DLCGPI+P T A NRY +I+DDFSR
Sbjct: 519 NQLCQACLMAKQIRQPFPAMANYRAEAPLELLHMDLCGPITPSTFAVNRYFLLIVDDFSR 578
Query: 55 YMWTILMKEKG---EVFGKFK 2
+MW ++K K E+F KFK
Sbjct: 579 WMWVFVIKTKDQALEMFAKFK 599
>gb|AAP12935.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1283
Score = 204 bits (519), Expect = 2e-50
Identities = 99/201 (49%), Positives = 136/201 (67%), Gaps = 4/201 (1%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSG-RLLVKVT 416
LF K +Q L+ D+YYIP L N++SLGQ TE G V M D L V D + RL++KV
Sbjct: 399 LFACKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVVMDNDDLEVFDKNPWRLVIKVR 458
Query: 415 RSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGE 236
R+ NRLY++ L++ P+CL L D W WHARLGHV+F+T++ + +EM G+P++
Sbjct: 459 RTSNRLYRIELQLASPVCLLTSLGDPAWLWHARLGHVNFQTLKLLVDKEMAAGVPQVHHP 518
Query: 235 NRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSR 56
N++C++CL+ KQ+R FP A +RA LELLH DLCGPI+P T A NRY +I+DDFSR
Sbjct: 519 NQLCQACLMAKQIRQPFPAMANYRAEAPLELLHMDLCGPITPSTFAVNRYFLLIVDDFSR 578
Query: 55 YMWTILMKEKG---EVFGKFK 2
+MW ++K K E+F KFK
Sbjct: 579 WMWVFVIKTKDQALEMFAKFK 599
>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108710383|gb|ABF98178.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1339
Score = 198 bits (504), Expect = 8e-49
Identities = 95/198 (47%), Positives = 129/198 (65%), Gaps = 1/198 (0%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSG-RLLVKVT 416
LF K +Q L+ D+YYIP L N++SLGQ TE G V M D L V D + RL++KV
Sbjct: 359 LFSCKNGDQWLLDDVYYIPSLYCNMVSLGQLTETGHRVVMDGDDLEVFDKNPWRLVMKVR 418
Query: 415 RSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGE 236
RS NRLY++ L++ P+CL A L+D W WHARLGHV+F ++ + +EM G+P +
Sbjct: 419 RSSNRLYRIELQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMAAGVPAVHHP 478
Query: 235 NRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSR 56
N++C++CLV KQVR FP A + A LELLH DLCGPI+P T NRY +I+DDFS
Sbjct: 479 NQLCQACLVAKQVRQPFPGMANYLAEAPLELLHMDLCGPITPSTFTGNRYFMLIVDDFSH 538
Query: 55 YMWTILMKEKGEVFGKFK 2
+MW ++K K + F+
Sbjct: 539 WMWVFVIKSKDQALAAFE 556
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 197 bits (502), Expect = 1e-48
Identities = 86/197 (43%), Positives = 132/197 (67%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSGRLLVKVTR 413
L K KL+ D+YY+P+LKSNILSLGQ E G ++ MK L + D + L+ KV
Sbjct: 71 LISLKDGAHKLITDVYYVPKLKSNILSLGQLVEKGYEIHMKDCCLWLRDKNSNLIAKVFM 130
Query: 412 SPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGEN 233
S NR++ ++++ + CL A ++DE+W WH R GH++F ++ + +++MV+G+P+I N
Sbjct: 131 SRNRMFTLNIKTNEAKCLKASIKDESWCWHMRFGHLNFGALKSLGEEKMVKGMPQINHPN 190
Query: 232 RICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSRY 53
++CE+CL+GK R SFPK A RA + L+L++ D+CGPI+PP+ NN+Y + IDD+SR
Sbjct: 191 QLCEACLLGKHARRSFPKEANSRAKEPLQLVYTDVCGPINPPSCGNNKYFLLFIDDYSRK 250
Query: 52 MWTILMKEKGEVFGKFK 2
W +K+K E F FK
Sbjct: 251 TWVYFLKQKSEAFVAFK 267
>gb|ABB47537.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1172
Score = 197 bits (500), Expect = 2e-48
Identities = 97/201 (48%), Positives = 133/201 (66%), Gaps = 4/201 (1%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSG-RLLVKVT 416
LF K +Q L+ D+YYIP L N++SLGQ TE G V M D L V D + RL++KV
Sbjct: 253 LFSCKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVMMDGDDLKVFDKNPWRLVMKVR 312
Query: 415 RSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGE 236
R+ NRLY++ L++ +CL A L++ W WHAR+GHV+F ++ + +EM G+P +
Sbjct: 313 RTSNRLYRIELQLASQVCLLASLDNPAWLWHARIGHVNFHALKLLVDKEMASGVPTVHHP 372
Query: 235 NRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSR 56
N++C++CLV KQVR FP A +RA LELLH DLCGPI+P T A NRY +I+DDFS
Sbjct: 373 NQLCQACLVAKQVRQPFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFMLIVDDFSN 432
Query: 55 YMWTILMKEKGE---VFGKFK 2
+MW ++K K + VF KFK
Sbjct: 433 WMWVFVIKLKDQALAVFEKFK 453
>gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Japonica Group]
Length = 1217
Score = 197 bits (500), Expect = 2e-48
Identities = 97/201 (48%), Positives = 133/201 (66%), Gaps = 4/201 (1%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSG-RLLVKVT 416
LF K +Q L+ D+YYIP L N++SLGQ TE G V M D L V D + RL++KV
Sbjct: 397 LFSCKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVMMDGDDLKVFDKNPWRLVMKVR 456
Query: 415 RSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGE 236
R+ NRLY++ L++ +CL A L++ W WHAR+GHV+F ++ + +EM G+P +
Sbjct: 457 RTSNRLYRIELQLASQVCLLASLDNPAWLWHARIGHVNFHALKLLVDKEMASGVPTVHHP 516
Query: 235 NRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSR 56
N++C++CLV KQVR FP A +RA LELLH DLCGPI+P T A NRY +I+DDFS
Sbjct: 517 NQLCQACLVAKQVRQPFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFMLIVDDFSN 576
Query: 55 YMWTILMKEKGE---VFGKFK 2
+MW ++K K + VF KFK
Sbjct: 577 WMWVFVIKLKDQALAVFEKFK 597
>gb|AAZ66952.1| 117M18_33 [Brassica rapa]
Length = 681
Score = 196 bits (498), Expect = 4e-48
Identities = 94/178 (52%), Positives = 127/178 (71%)
Frame = -1
Query: 535 ELKSNILSLGQATEAGCDVRMKQDYLTVHDPSGRLLVKVTRSPNRLYKVSLRIGKPMCLH 356
+L+SNI+SLGQATE GC+V+MK + L + D +G L+++ TR+ NRLYKV L+ CL
Sbjct: 361 KLRSNIISLGQATEVGCEVKMKDNQLKLFDKTGHLMIQTTRAKNRLYKVVLQ-ADIHCLQ 419
Query: 355 AILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGENRICESCLVGKQVRGSFPKA 176
L E+ RWHARLGHV+ TM+ M +++V G+P+I C SCL GKQVR FP++
Sbjct: 420 ISLGSESSRWHARLGHVNTDTMKVMINKQLVTGMPEIAVTKETCVSCLRGKQVRQPFPQS 479
Query: 175 ATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSRYMWTILMKEKGEVFGKFK 2
+RA+ LEL+H DLCGPI+P T RYVFV+IDD+SRYMWT+L+++K E KFK
Sbjct: 480 TAYRASCPLELVHGDLCGPITPSTPGQKRYVFVLIDDYSRYMWTVLLEKKSEALDKFK 537
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 196 bits (497), Expect = 5e-48
Identities = 88/197 (44%), Positives = 130/197 (65%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSGRLLVKVTR 413
L + K + + + ++YYIP +K+NILSLGQ E G D+R+K + L++ D L+ KV
Sbjct: 380 LIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPM 439
Query: 412 SPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGEN 233
S NR++ +++R CL ++E+W WH R GH++F + +S++EMV+GLP I N
Sbjct: 440 SKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPN 499
Query: 232 RICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSRY 53
++CE CL+GKQ + SFPK ++ RA KSLEL+H D+CGPI P ++ + Y + IDDFSR
Sbjct: 500 QVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559
Query: 52 MWTILMKEKGEVFGKFK 2
W +KEK EVF FK
Sbjct: 560 TWVYFLKEKSEVFEIFK 576
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 194 bits (492), Expect = 2e-47
Identities = 87/197 (44%), Positives = 129/197 (65%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSGRLLVKVTR 413
L + K + + + ++YYIP +K+NILSLGQ E G D+R+K + L++ D L+ KV
Sbjct: 380 LIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPM 439
Query: 412 SPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGEN 233
S NR++ +++R CL ++E+W WH R GH++F + +S++EMV+GLP I N
Sbjct: 440 SKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPN 499
Query: 232 RICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSRY 53
++CE CL+GKQ + SFPK ++ RA K LEL+H D+CGPI P ++ + Y + IDDFSR
Sbjct: 500 QVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559
Query: 52 MWTILMKEKGEVFGKFK 2
W +KEK EVF FK
Sbjct: 560 TWVYFLKEKSEVFEIFK 576
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 194 bits (492), Expect = 2e-47
Identities = 87/197 (44%), Positives = 129/197 (65%)
Frame = -1
Query: 592 LFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPSGRLLVKVTR 413
L + K + + + ++YYIP +K+NILSLGQ E G D+R+K + L++ D L+ KV
Sbjct: 380 LIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPM 439
Query: 412 SPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRCMSQQEMVQGLPKIKGEN 233
S NR++ +++R CL ++E+W WH R GH++F + +S++EMV+GLP I N
Sbjct: 440 SKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPN 499
Query: 232 RICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVFVIIDDFSRY 53
++CE CL+GKQ + SFPK ++ RA K LEL+H D+CGPI P ++ + Y + IDDFSR
Sbjct: 500 QVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559
Query: 52 MWTILMKEKGEVFGKFK 2
W +KEK EVF FK
Sbjct: 560 TWVYFLKEKSEVFEIFK 576