BLASTX nr result

ID: Paeonia24_contig00033496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00033496
         (392 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139099.1| PREDICTED: protein TIC 20-II, chloroplastic-...    60   4e-07
ref|XP_006376041.1| tic20 family protein [Populus trichocarpa] g...    52   3e-06
ref|XP_006353229.1| PREDICTED: protein TIC 20-II, chloroplastic-...    55   8e-06

>ref|XP_004139099.1| PREDICTED: protein TIC 20-II, chloroplastic-like [Cucumis sativus]
           gi|449485336|ref|XP_004157137.1| PREDICTED: protein TIC
           20-II, chloroplastic-like [Cucumis sativus]
          Length = 208

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/52 (57%), Positives = 35/52 (67%)
 Frame = -2

Query: 211 KVVKPTTIRMSYTTTQATDRLISSISYLLPFFNGLQYSSNLIG*FQTLGYAF 56
           K  K T IRMSY  T ATDRLIS+++Y LPFFN LQY   L   +  LG+AF
Sbjct: 42  KSPKFTPIRMSYNPTPATDRLISAVAYTLPFFNSLQYGRFLFAQYPALGFAF 93


>ref|XP_006376041.1| tic20 family protein [Populus trichocarpa]
           gi|118482664|gb|ABK93251.1| unknown [Populus
           trichocarpa] gi|550325265|gb|ERP53838.1| tic20 family
           protein [Populus trichocarpa]
          Length = 209

 Score = 52.4 bits (124), Expect(2) = 3e-06
 Identities = 29/58 (50%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
 Frame = -2

Query: 232 PFYLQNPKV---VKPTTIRMSYTTTQATDRLISSISYLLPFFNGLQYSSNLIG*FQTL 68
           PF    PK     K T  RMSY  T ATDRL+S++SY LPFFN LQY   L   + +L
Sbjct: 33  PFLKFPPKTRLSQKSTVTRMSYNPTPATDRLVSAVSYTLPFFNSLQYGRFLFTTYPSL 90



 Score = 24.3 bits (51), Expect(2) = 3e-06
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -3

Query: 357 MISIAILRLPPNPNYKTLINPYPTTSSFTTRLT 259
           M SI++LRL   P  KTL   +P  SSF   LT
Sbjct: 1   MASISLLRLSLIPTPKTLSKSHP-FSSFNPPLT 32


>ref|XP_006353229.1| PREDICTED: protein TIC 20-II, chloroplastic-like [Solanum
           tuberosum]
          Length = 202

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/49 (55%), Positives = 31/49 (63%)
 Frame = -2

Query: 202 KPTTIRMSYTTTQATDRLISSISYLLPFFNGLQYSSNLIG*FQTLGYAF 56
           KPT+I  SY    ATDRLIS+++Y LPFFNGLQY   L   F  L   F
Sbjct: 39  KPTSISASYNPIPATDRLISAVAYFLPFFNGLQYGRFLFAQFPALALPF 87


Top