BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00033486
         (734 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              123   4e-55
emb|CAN68480.1| hypothetical protein VITISV_007280 [Vitis vinifera]   101   3e-41
emb|CAN79733.1| hypothetical protein VITISV_016615 [Vitis vinifera]    96   4e-40
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc...   102   9e-39
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]   100   2e-38
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]    97   6e-38
emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera]   113   1e-37
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]   107   4e-37
emb|CCH50966.1| T4.5 [Malus x robusta]                                 93   8e-37
emb|CAN76947.1| hypothetical protein VITISV_017166 [Vitis vinifera]   103   3e-36
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar...   103   1e-35
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]    94   1e-35
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   102   1e-35
emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis ...    97   4e-35
emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]    89   4e-35
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    89   6e-35
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]    96   2e-34
gb|AAF63122.1|AC009526_7 Hypothetical protein [Arabidopsis thali...    99   2e-34
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   102   2e-34
emb|CAN77529.1| hypothetical protein VITISV_041425 [Vitis vinifera]    98   3e-34

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  123 bits (308), Expect(2) = 4e-55
 Identities = 58/108 (53%), Positives = 78/108 (72%)
 Frame = +1

Query: 1    ISRSQHGIHKPNSKYVMHIQFSSETEMELTSYSQASKSPQWHRAMGLEFDALQESGIWSL 180
            ++RS+HGI KPN KY MH    +   +E T Y+QA+K P+W  AM  EF ALQ++G W L
Sbjct: 847  VTRSKHGISKPNPKYAMHSTLLA-LPLEPTCYTQAAKYPEWREAMDHEFKALQQAGTWFL 905

Query: 181  VQPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF*E 324
            V P   MN+LP+KWVF IK+ SDGS+E YK+ L+ANGF+QQ G+++ E
Sbjct: 906  VPPSSLMNILPNKWVFRIKKRSDGSVERYKARLVANGFHQQEGLDYTE 953



 Score =  119 bits (297), Expect(2) = 4e-55
 Identities = 60/135 (44%), Positives = 85/135 (62%)
 Frame = +2

Query: 329  YTTIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SF 508
            ++TI+++LALA++    I+QLDVQN FLH ++ E++YM Q  GF DP FP HVC+L  S 
Sbjct: 961  HSTIRLVLALAVSHRWPIRQLDVQNVFLHGYLNEDIYMKQHVGFVDPKFPQHVCKLRRSL 1020

Query: 509  YGLRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDA 688
            YGL+Q PRAW + FS+YLEE  F+ ++  +S+FTF++                  NN   
Sbjct: 1021 YGLKQAPRAWFRCFSDYLEELGFLESRADYSMFTFNNRGIYIILLIYVDDILITGNNSSH 1080

Query: 689  ISKLIVDLSQKF*MK 733
            IS LI +L+  F MK
Sbjct: 1081 ISHLIHNLNSLFSMK 1095


>emb|CAN68480.1| hypothetical protein VITISV_007280 [Vitis vinifera]
          Length = 619

 Score =  101 bits (251), Expect(2) = 3e-41
 Identities = 51/134 (38%), Positives = 79/134 (58%)
 Frame = +2

Query: 332 TTIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFY 511
           TT+ ++L++A++ G +++QLDV NAFL   ++E VYM QP GF D + P HVC+LH + Y
Sbjct: 228 TTMILVLSIAVSNGWSLRQLDVNNAFLQGTISETVYMAQPPGFIDADKPTHVCKLHKAIY 287

Query: 512 GLRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAI 691
           GL+Q PR W+     +L +F F  +    SLF  H GT                N+ D +
Sbjct: 288 GLKQAPRTWYHELCQFLVDFGFKNSHSDTSLFVLHAGTNLLYLLVYVDDIIITGNSDDLV 347

Query: 692 SKLIVDLSQKF*MK 733
           S+++  L+Q+F +K
Sbjct: 348 SQVVECLAQRFSLK 361



 Score = 94.4 bits (233), Expect(2) = 3e-41
 Identities = 48/107 (44%), Positives = 68/107 (63%)
 Frame = +1

Query: 4   SRSQHGIHKPNSKYVMHIQFSSETEMELTSYSQASKSPQWHRAMGLEFDALQESGIWSLV 183
           +R+++ I KP  K  +H   +S    E TS +QA K   W +AM  E+DAL  +G W LV
Sbjct: 113 TRAKNHITKPIQKLNLHTHLASFPSSEPTSVAQALKDSNWCKAMSEEYDALVRNGTWELV 172

Query: 184 QPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF*E 324
            P    N++  KWVF IKRNSDGSI+ +K+ L+A GF+Q+ GV++ E
Sbjct: 173 SPTGITNLVGCKWVFRIKRNSDGSIDRFKACLVAKGFHQRPGVDYLE 219


>emb|CAN79733.1| hypothetical protein VITISV_016615 [Vitis vinifera]
          Length = 807

 Score = 96.3 bits (238), Expect(2) = 4e-40
 Identities = 47/107 (43%), Positives = 67/107 (62%)
 Frame = +1

Query: 4   SRSQHGIHKPNSKYVMHIQFSSETEMELTSYSQASKSPQWHRAMGLEFDALQESGIWSLV 183
           +R+++ I KP  K  +H   +S    E TS +Q  K   W +A+  E+DAL  +G W LV
Sbjct: 361 TRAKNHITKPIQKLNIHTHLASSPSFEPTSLAQVLKDSNWRKAISEEYDALVRNGTWELV 420

Query: 184 QPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF*E 324
            P    N++  KWVF IKRNSDGSIE +K+ L+A GF+Q+ GV++ E
Sbjct: 421 SPTGITNLVGCKWVFCIKRNSDGSIERFKARLVAKGFHQRPGVDYLE 467



 Score = 95.9 bits (237), Expect(2) = 4e-40
 Identities = 51/134 (38%), Positives = 77/134 (57%)
 Frame = +2

Query: 332 TTIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFY 511
           TT++++L++AI+ G ++ QLDV NAFL   ++E VYM Q  GF D + P HVC+LH + Y
Sbjct: 476 TTVRLVLSIAISNGWSLHQLDVNNAFLQSTLSETVYMAQFPGFIDADKPTHVCKLHKAIY 535

Query: 512 GLRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAI 691
           GL+Q  RAW+     +L +  F  +    SLF  H GT                NN D +
Sbjct: 536 GLKQASRAWYHELRQFLVDSGFKNSHSNTSLFILHAGTNLLYLLVYVDDIIITGNNNDLV 595

Query: 692 SKLIVDLSQKF*MK 733
           S+++  L+Q+F +K
Sbjct: 596 SQVVECLAQRFSLK 609


>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 900

 Score =  102 bits (253), Expect(2) = 9e-39
 Identities = 52/133 (39%), Positives = 81/133 (60%)
 Frame = +2

Query: 335 TIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFYG 514
           TI+++L++A++ G +++QLDVQNAFLH ++ EEVYM QP GF D   PH +C+L  + YG
Sbjct: 473 TIRLVLSIAMSQGWSLRQLDVQNAFLHGYLDEEVYMRQPPGFEDARQPHFLCKLDKALYG 532

Query: 515 LRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAIS 694
           L+Q PRAW+   S  L+E  F  ++   SLF ++ G                S++  A++
Sbjct: 533 LKQAPRAWYSRLSKKLQELGFSSSKADTSLFFYNKGHHKMFVLVYVDDIIVASSSSPAVN 592

Query: 695 KLIVDLSQKF*MK 733
            L+ DL + F +K
Sbjct: 593 ALLKDLEKDFALK 605



 Score = 85.5 bits (210), Expect(2) = 9e-39
 Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
 Frame = +1

Query: 1   ISRSQHGIHKPNSKYVMHIQFSSETEM-ELTSYSQASKSPQWHRAMGLEFDALQESGIWS 177
           ++RSQHG+H+P       +++   TE  E +S  +A  S  W +AM  EF AL  +  W 
Sbjct: 355 VTRSQHGVHRPKKYTDGTVRYGCLTETGEPSSLQEALSSANWKQAMDKEFSALLHNKTWH 414

Query: 178 LVQPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF 318
           LV P    N++ SKWV+ IK+ +DG+I+ YK+ L+A GF Q+ G+++
Sbjct: 415 LVPPVKGKNIIDSKWVYKIKKKADGTIDRYKARLVAKGFKQRYGIDY 461


>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score =  100 bits (250), Expect(2) = 2e-38
 Identities = 52/134 (38%), Positives = 77/134 (57%)
 Frame = +2

Query: 332  TTIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFY 511
            TT++++L+LA+  G +++QLD  N FL   +TE+ +M QP GF D + PHHVC+L  + Y
Sbjct: 706  TTVRLVLSLAVXQGWSLRQLDXNNXFLQGTLTEDXFMSQPPGFIDRDHPHHVCKLRKAIY 765

Query: 512  GLRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAI 691
            GL+Q PRAW+     +L +F FI + V  SLF F++                  NN +A 
Sbjct: 766  GLKQAPRAWYHELRQFLLQFGFINSIVDTSLFIFNNHGTILYLLVHVDDIIITGNNVEAA 825

Query: 692  SKLIVDLSQKF*MK 733
               I  LSQ+F +K
Sbjct: 826  QTFIQQLSQRFSLK 839



 Score = 85.9 bits (211), Expect(2) = 2e-38
 Identities = 44/108 (40%), Positives = 62/108 (57%)
 Frame = +1

Query: 1   ISRSQHGIHKPNSKYVMHIQFSSETEMELTSYSQASKSPQWHRAMGLEFDALQESGIWSL 180
           ++RS+H IHKP  K  +       T +E T+ +QA K P+W +AM  EFDAL  +G W L
Sbjct: 591 VTRSKHNIHKPIQKXNLTAXLQQPT-LEPTTVTQALKDPKWRQAMSAEFDALLRNGTWDL 649

Query: 181 VQPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF*E 324
           V      N+   KW+F  K   +GSI+ YK+ L+A GF+Q  G  + E
Sbjct: 650 VPSHPXQNLXGCKWIFRTKYLPNGSIDRYKARLVAKGFHQXPGXXYSE 697


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score = 96.7 bits (239), Expect(2) = 6e-38
 Identities = 44/105 (41%), Positives = 69/105 (65%)
 Frame = +1

Query: 4   SRSQHGIHKPNSKYVMHIQFSSETEMELTSYSQASKSPQWHRAMGLEFDALQESGIWSLV 183
           +R+++ I KP  K  +HIQ S   ++E T+ +QA K P+W +AM  E+DAL  +G W LV
Sbjct: 629 TRAKNNIRKPIQKLNLHIQLSKPLDLEPTTPTQALKDPKWRKAMSEEYDALVRNGTWELV 688

Query: 184 QPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF 318
                 N++  KW+F  KRNSDGSI+ +K+ L+A GF+Q+  +++
Sbjct: 689 PSNPSQNVVGCKWIFRTKRNSDGSIDRFKARLVAKGFHQRPDIDY 733



 Score = 88.2 bits (217), Expect(2) = 6e-38
 Identities = 42/92 (45%), Positives = 61/92 (66%)
 Frame = +2

Query: 332  TTIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFY 511
            TTI ++L++A++ G  ++QLDV N FL   +TE VYM QP GF D + P HVC+L  + Y
Sbjct: 744  TTIMLVLSVAVSNGWILRQLDVNNVFLQGTLTEHVYMTQPPGFIDQDSPSHVCKLKKAIY 803

Query: 512  GLRQYPRAWHK*FSNYLEEFDFIMAQVYHSLF 607
            GL+Q PRAW++   ++L +F F  +    SLF
Sbjct: 804  GLKQAPRAWYQELRSFLLQFGFTNSHADTSLF 835


>emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera]
          Length = 1212

 Score =  113 bits (282), Expect(2) = 1e-37
 Identities = 60/133 (45%), Positives = 77/133 (57%)
 Frame = +2

Query: 335  TIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFYG 514
            TI+IIL+LAI  G  + QLDV+NAFLH F+ EEVYM QP G+ +P FP HVCRL  + YG
Sbjct: 823  TIRIILSLAITSGWRLHQLDVKNAFLHGFLNEEVYMEQPPGYTNPQFPQHVCRLKRALYG 882

Query: 515  LRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAIS 694
            L+Q PRAW   FS++L +  F   Q   SLF +H                   +N   + 
Sbjct: 883  LKQAPRAWFHRFSSFLLKLGFFSNQXDSSLFVYHSSVGTIYLLLYVDDMVITXSNSSMVQ 942

Query: 695  KLIVDLSQKF*MK 733
             LI  LS++F MK
Sbjct: 943  TLITQLSKEFSMK 955



 Score = 70.9 bits (172), Expect(2) = 1e-37
 Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
 Frame = +1

Query: 1    ISRSQHGIHKPNSKYVMHIQFSSETEMELTS------YSQASKSPQWHRAMGLEFDALQE 162
            I+R + GI KP   + M++  SS+T   L +      +  A+K P+W  AM  E  AL+ 
Sbjct: 700  ITRGKAGIFKPRLYHAMNVLSSSQTFQALLALKEHWGFKPATKHPEWLSAMDDEIQALKT 759

Query: 163  SGIWSLVQPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF 318
            +  W LV      NM+  +W+F  K   DGSIE +K+ L+A GF Q  G++F
Sbjct: 760  NDTWVLVPCPTNHNMVGYRWIFKTKLQLDGSIEHHKARLVAQGFSQIHGLDF 811


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  107 bits (267), Expect(2) = 4e-37
 Identities = 57/133 (42%), Positives = 75/133 (56%)
 Frame = +2

Query: 335  TIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFYG 514
            T++IIL+LA+  G  + QLDV+NAFLH F+ EEVYM QP G+ DP FP HVCRL  + YG
Sbjct: 929  TVRIILSLAVTSGWRLHQLDVKNAFLHGFLNEEVYMEQPPGYTDPQFPQHVCRLKRALYG 988

Query: 515  LRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAIS 694
            L+Q PRAW   FS++L +  F  +Q   SLF +H                   +    + 
Sbjct: 989  LKQAPRAWFHRFSSFLLKHGFHSSQADSSLFFYHSSLGTVYLLLYVDDMIITGSTPSLVH 1048

Query: 695  KLIVDLSQKF*MK 733
              I  LS +F MK
Sbjct: 1049 TFITRLSNEFSMK 1061



 Score = 74.7 bits (182), Expect(2) = 4e-37
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
 Frame = +1

Query: 1    ISRSQHGIHKPNSKYVMHIQFSSETEM------ELTSYSQASKSPQWHRAMGLEFDALQE 162
            I+R + GI KP   + MHI  SS+         E   +  A+K P+W  AM  E  AL++
Sbjct: 806  ITRGKAGIFKPRLYHAMHISSSSQLFQAFLALKEPRGFKSAAKHPEWLSAMDDEIHALKK 865

Query: 163  SGIWSLVQPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF 318
            +  W LV      N++  +W+F  K +SDGSIE +K+ L+A GF Q  G++F
Sbjct: 866  NDTWVLVPRPQHHNVVGCRWIFKTKLHSDGSIERHKARLVAQGFSQVHGLDF 917


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 92.8 bits (229), Expect(2) = 8e-37
 Identities = 46/92 (50%), Positives = 62/92 (67%)
 Frame = +2

Query: 332  TTIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFY 511
            TTI+I+L++A+++   I QLDV NAFLH  + E+VYM QP GF DP+ PHHVC+L  S Y
Sbjct: 1237 TTIRILLSIAVSYYWFIHQLDVSNAFLHGHLKEDVYMVQPPGFVDPSKPHHVCKLRKSLY 1296

Query: 512  GLRQYPRAWHK*FSNYLEEFDFIMAQVYHSLF 607
            GL+Q PRAW++ F   +    F  +    SLF
Sbjct: 1297 GLKQAPRAWYEAFYTAILSLGFSSSHSDTSLF 1328



 Score = 88.2 bits (217), Expect(2) = 8e-37
 Identities = 49/114 (42%), Positives = 68/114 (59%), Gaps = 6/114 (5%)
 Frame = +1

Query: 1    ISRSQHGIHKPN----SKYVMHIQFSSETEMELT--SYSQASKSPQWHRAMGLEFDALQE 162
            I+R++ GIHKP     +K+ +     S T +  T  ++ QASKS  W  AM  EF ALQ 
Sbjct: 1115 ITRAKAGIHKPKVFTATKHQLPSTVDSLTALPPTPSTFLQASKSSHWMEAMQFEFQALQS 1174

Query: 163  SGIWSLVQPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF*E 324
            +G W LV      N++  KWVF +K   DG+IE YK+ L+A GF+QQ G++F E
Sbjct: 1175 TGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEGLDFSE 1228


>emb|CAN76947.1| hypothetical protein VITISV_017166 [Vitis vinifera]
          Length = 548

 Score =  103 bits (258), Expect(2) = 3e-36
 Identities = 52/129 (40%), Positives = 77/129 (59%)
 Frame = +2

Query: 332 TTIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFY 511
           TTI+++L+LA++ G  ++Q+D+ NAFLH  + E+VYM QP  F  P   HHVC+L  S Y
Sbjct: 99  TTIRMVLSLAVSRGWHLRQIDIXNAFLHGVLQEDVYMTQPPRFIHPQLTHHVCKLQKSLY 158

Query: 512 GLRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAI 691
           GLRQ P+AW    ++ L+   FI +Q  HSL+ +HHG+               S +  AI
Sbjct: 159 GLRQAPQAWFSRLTDQLQALGFIGSQXBHSLYVYHHGSTLIYFLIYVDDXIITSADIHAI 218

Query: 692 SKLIVDLSQ 718
            K+I  + +
Sbjct: 219 XKVISQMDK 227



 Score = 75.1 bits (183), Expect(2) = 3e-36
 Identities = 38/83 (45%), Positives = 49/83 (59%)
 Frame = +1

Query: 76  EMELTSYSQASKSPQWHRAMGLEFDALQESGIWSLVQPQLFMNMLPSKWVFWIKRNSDGS 255
           E E T YS   K      AM  EFDAL  +G W+LV    + N++  KWV+ IKR  DG 
Sbjct: 8   EKEPTCYSTTVKHSNXREAMNKEFDALLANGTWTLVPKPXYANLVDCKWVYKIKRKXDGG 67

Query: 256 IEWYKSHLMANGFYQQSGVNF*E 324
           IE +K+ L+A GF+Q  GV+F E
Sbjct: 68  IERFKACLVAKGFHQHEGVDFGE 90


>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
          Length = 1522

 Score =  103 bits (256), Expect(2) = 1e-35
 Identities = 56/133 (42%), Positives = 76/133 (57%)
 Frame = +2

Query: 335  TIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFYG 514
            T+++IL +A      +KQ+DV+NAFLH  +TE VYM QP GF D + P HVC LH S YG
Sbjct: 1005 TVRLILHVATVLKWELKQMDVKNAFLHGDLTETVYMRQPAGFVDKSKPDHVCLLHKSLYG 1064

Query: 515  LRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAIS 694
            L+Q PRAW   FSN+L EF FI +    SLF +                    NN  +++
Sbjct: 1065 LKQSPRAWFDRFSNFLLEFGFICSLFDPSLFVYSSNNDVILLLLYVDDMVITGNNSQSLT 1124

Query: 695  KLIVDLSQKF*MK 733
             L+  L+++F MK
Sbjct: 1125 HLLAALNKEFRMK 1137



 Score = 73.9 bits (180), Expect(2) = 1e-35
 Identities = 40/108 (37%), Positives = 64/108 (59%)
 Frame = +1

Query: 1    ISRSQHGIHKPNSKYVMHIQFSSETEMELTSYSQASKSPQWHRAMGLEFDALQESGIWSL 180
            ++R + GI KPN +YV+     S  E +  + ++A K P W+ AM  E    +E+  W+L
Sbjct: 890  VTRGKEGISKPNKRYVLLTHKVSIPEPK--TVTEALKHPGWNNAMQEEMGNCKETETWTL 947

Query: 181  VQPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF*E 324
            V     MN+L S WVF  K ++DGS++  K+ L+A GF Q+ G+++ E
Sbjct: 948  VPYSPNMNVLGSMWVFRTKLHADGSLDKLKARLVAKGFKQEEGIDYLE 995


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score = 94.0 bits (232), Expect(2) = 1e-35
 Identities = 47/107 (43%), Positives = 67/107 (62%)
 Frame = +1

Query: 4    SRSQHGIHKPNSKYVMHIQFSSETEMELTSYSQASKSPQWHRAMGLEFDALQESGIWSLV 183
            +R+++ I KP  K  +H    +      TS SQA K   W +AM  E+DAL  +G W LV
Sbjct: 819  TRAKNNITKPIQKLNLHTHKPTFQTTTPTSISQALKDQNWRQAMSDEYDALVRNGTWELV 878

Query: 184  QPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF*E 324
             P+   N++  KW+F IKRNSDGSI+ YK+ L+A GF+Q+ GV++ E
Sbjct: 879  PPEDITNLVGCKWIFRIKRNSDGSIDRYKARLVAKGFHQRPGVDYHE 925



 Score = 83.2 bits (204), Expect(2) = 1e-35
 Identities = 44/134 (32%), Positives = 73/134 (54%)
 Frame = +2

Query: 332  TTIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFY 511
            TT++++L++A++ G +++QLDV NAFL   ++E V+M QP GF D + P +VC+LH + Y
Sbjct: 934  TTVRLVLSIAVSNGWSLRQLDVNNAFLQGRLSENVFMAQPPGFVDSDHPSYVCKLHKAIY 993

Query: 512  GLRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAI 691
            GL+Q PRAW+     +L    F  +    SLF                      ++   +
Sbjct: 994  GLKQAPRAWYHELRQFLLTSGFKNSHSDTSLFVLRSSNHVVYLLVYVDDIILTGSSDTLV 1053

Query: 692  SKLIVDLSQKF*MK 733
            S+ +  L+Q F +K
Sbjct: 1054 SQFVDYLAQXFSLK 1067


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  102 bits (255), Expect(2) = 1e-35
 Identities = 57/133 (42%), Positives = 79/133 (59%)
 Frame = +2

Query: 335  TIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFYG 514
            TI+IIL+LA++ G +++QLDVQNAFLH ++ EEVYM QP GF DP  PHHVC+L  + YG
Sbjct: 1027 TIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKALYG 1086

Query: 515  LRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAIS 694
            L+Q PRAW    S  L +  F  ++   SLF  + G                S++  A +
Sbjct: 1087 LKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITMFVLVYVDDIIVASSSERATA 1146

Query: 695  KLIVDLSQKF*MK 733
             L+ DL  +F +K
Sbjct: 1147 ALLQDLKGEFALK 1159



 Score = 73.9 bits (180), Expect(2) = 1e-35
 Identities = 35/87 (40%), Positives = 57/87 (65%)
 Frame = +1

Query: 58   QFSSETEMELTSYSQASKSPQWHRAMGLEFDALQESGIWSLVQPQLFMNMLPSKWVFWIK 237
            ++SS+ + E T+  +A K   W  AM  E+DAL ++  W LV PQ   N++  KWV+ IK
Sbjct: 929  KWSSQRKGEPTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIK 988

Query: 238  RNSDGSIEWYKSHLMANGFYQQSGVNF 318
            R +DG+++ YK+ L+A GF Q+ G+++
Sbjct: 989  RKADGTLDRYKARLVAKGFKQRYGIDY 1015


>emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis thaliana]
            gi|7268350|emb|CAB78643.1| reverse transcriptase like
            protein [Arabidopsis thaliana]
          Length = 1942

 Score = 97.4 bits (241), Expect(2) = 4e-35
 Identities = 55/133 (41%), Positives = 74/133 (55%)
 Frame = +2

Query: 335  TIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFYG 514
            T++++L +A      +KQ+DV+NAFLH  +TE VYM QP GF +   P HVC LH + YG
Sbjct: 1797 TVRMVLHVATVMDWEVKQMDVKNAFLHGDLTETVYMLQPAGFVNKEKPTHVCHLHKALYG 1856

Query: 515  LRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAIS 694
            L+Q PRAW   FSNYL EF F  +    SLF +  G                 +N   + 
Sbjct: 1857 LKQAPRAWFDKFSNYLLEFGFNCSIKDPSLFIYLKGNDLILLLLYVDDMVLTGSNSATMI 1916

Query: 695  KLIVDLSQKF*MK 733
            KL+ DL+ +F MK
Sbjct: 1917 KLLEDLNTQFRMK 1929



 Score = 77.8 bits (190), Expect(2) = 4e-35
 Identities = 44/108 (40%), Positives = 64/108 (59%)
 Frame = +1

Query: 1    ISRSQHGIHKPNSKYVMHIQFSSETEMELTSYSQASKSPQWHRAMGLEFDALQESGIWSL 180
            I+RS+ GI KPN +Y +        E +  + ++A K P W  AM  E+D   E+  WSL
Sbjct: 1682 ITRSKKGITKPNPRYGLLTHKVKYAEPK--TVTEALKHPGWTAAMHEEYDNCTEAQTWSL 1739

Query: 181  VQPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF*E 324
            V     MN+L SKWVF  K N+DGS++  K+ L+A GF Q+ G+++ E
Sbjct: 1740 VPYTSDMNVLGSKWVFRTKLNADGSLDKLKARLVAKGFDQEEGIDYLE 1787



 Score = 90.1 bits (222), Expect(2) = 6e-33
 Identities = 47/96 (48%), Positives = 61/96 (63%)
 Frame = +2

Query: 335  TIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFYG 514
            T++++L +A      +KQ+DV+NAFLH  +TE VYM QP GF +   P HVC LH + YG
Sbjct: 897  TVRMVLHVATVMDWEVKQMDVKNAFLHGDLTETVYMLQPAGFVNKEKPTHVCHLHKALYG 956

Query: 515  LRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHG 622
            L+Q PRAW   FSNYL EF F  +    SLF +  G
Sbjct: 957  LKQAPRAWFDKFSNYLLEFGFNCSIKDPSLFIYLKG 992



 Score = 77.8 bits (190), Expect(2) = 6e-33
 Identities = 44/108 (40%), Positives = 64/108 (59%)
 Frame = +1

Query: 1    ISRSQHGIHKPNSKYVMHIQFSSETEMELTSYSQASKSPQWHRAMGLEFDALQESGIWSL 180
            I+RS+ GI KPN +Y +        E +  + ++A K P W  AM  E+D   E+  WSL
Sbjct: 782  ITRSKKGITKPNPRYGLLTHKVKYAEPK--TVTEALKHPGWTAAMHEEYDNCTEAQTWSL 839

Query: 181  VQPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF*E 324
            V     MN+L SKWVF  K N+DGS++  K+ L+A GF Q+ G+++ E
Sbjct: 840  VPYTSDMNVLGSKWVFRTKLNADGSLDKLKARLVAKGFDQEEGIDYLE 887


>emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]
          Length = 555

 Score = 89.0 bits (219), Expect(2) = 4e-35
 Identities = 46/107 (42%), Positives = 65/107 (60%)
 Frame = +1

Query: 4   SRSQHGIHKPNSKYVMHIQFSSETEMELTSYSQASKSPQWHRAMGLEFDALQESGIWSLV 183
           +R+++ I KP  K  +H    +      TS SQA K   W +AM  E+ AL  +G W LV
Sbjct: 232 TRAKNNITKPIQKLNLHTHKPTFQNTTPTSISQALKDHNWRQAMSEEYGALVCNGTWELV 291

Query: 184 QPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF*E 324
            P+   N +  KW+F IKRNS GSI+ YK+HL+A GF+Q+ GV++ E
Sbjct: 292 PPKDITNQVGCKWIFCIKRNSYGSIDRYKAHLVAKGFHQRPGVDYHE 338



 Score = 86.3 bits (212), Expect(2) = 4e-35
 Identities = 45/134 (33%), Positives = 74/134 (55%)
 Frame = +2

Query: 332 TTIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFY 511
           TT++++L++ ++ G +++QLDV NAFL   ++E V+M QP  F D + P +VC+LH + Y
Sbjct: 347 TTVRLVLSIVVSNGWSLRQLDVNNAFLQGRLSENVFMAQPPSFVDSDHPSYVCKLHKAIY 406

Query: 512 GLRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAI 691
           GL+Q PRAW+     +L    F  +    SLF F                    N+   +
Sbjct: 407 GLKQAPRAWYHKLRQFLLTSGFKNSHSDTSLFVFRSSNHVLYLLIYVDDIILTGNSDTLV 466

Query: 692 SKLIVDLSQKF*MK 733
           S+L+  L+Q+F +K
Sbjct: 467 SQLVDYLAQRFSLK 480


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 88.6 bits (218), Expect(2) = 6e-35
 Identities = 44/100 (44%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
 Frame = +2

Query: 329  YTTIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SF 508
            ++TI+++L+LA++   +++QLDVQNAFLH  + E VYM QP GF D   P++ C L  S 
Sbjct: 1012 HSTIRLVLSLAVSQKWSLRQLDVQNAFLHGILEETVYMKQPPGFADTTHPNYHCHLQKSL 1071

Query: 509  YGLRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFH-HGT 625
            YGL+Q PRAW+   S  L+   F+ ++   SLF ++ H T
Sbjct: 1072 YGLKQRPRAWYSRLSEKLQSLGFVPSKADVSLFIYNAHST 1111



 Score = 86.3 bits (212), Expect(2) = 6e-35
 Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
 Frame = +1

Query: 4    SRSQHGIHKPNSKYVMHIQFSSETEM--ELTSYSQASKSPQWHRAMGLEFDALQESGIWS 177
            +R QHGI KP       +++ +      E +S S+A   PQW  AM  EF ALQ++  W+
Sbjct: 896  TRLQHGISKPKQFTDGTVRYGNAAARITEPSSVSEALADPQWRAAMEAEFQALQKNNTWT 955

Query: 178  LVQPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF 318
            LV P    N++  KWVF +K N+DGSI+  K+ L+A GF QQ G+++
Sbjct: 956  LVPPDRTRNLIDCKWVFKVKYNADGSIDRLKARLVAKGFKQQYGIDY 1002


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score = 95.5 bits (236), Expect(2) = 2e-34
 Identities = 52/130 (40%), Positives = 76/130 (58%)
 Frame = +2

Query: 335  TIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFYG 514
            TI++ILALA++F  +++QLDV+NAFL+  + EEV+M QP GF +P +P +VC+LH + YG
Sbjct: 948  TIRLILALAVSFQWSVRQLDVENAFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKALYG 1007

Query: 515  LRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAIS 694
            L+Q PRAW +     L ++ F  ++   SLF FH  T                +N   +S
Sbjct: 1008 LKQAPRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVYVDDILVTGSNPMLVS 1067

Query: 695  KLIVDLSQKF 724
              I  L  KF
Sbjct: 1068 HFISYLRTKF 1077



 Score = 77.8 bits (190), Expect(2) = 2e-34
 Identities = 39/106 (36%), Positives = 62/106 (58%)
 Frame = +1

Query: 1    ISRSQHGIHKPNSKYVMHIQFSSETEMELTSYSQASKSPQWHRAMGLEFDALQESGIWSL 180
            ++R++ GIHK  S  V H         E  +YSQASK+  W +AM  E+ AL  +  WSL
Sbjct: 838  VTRAKSGIHKKRSFIVQHTT-------EPRTYSQASKNDSWVQAMNSEYQALLRNNTWSL 890

Query: 181  VQPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF 318
            V P    +++  +W++ +K   DGSI+ +K+ L+A GF Q  G+++
Sbjct: 891  VPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDY 936


>gb|AAF63122.1|AC009526_7 Hypothetical protein [Arabidopsis thaliana]
          Length = 559

 Score = 98.6 bits (244), Expect(2) = 2e-34
 Identities = 55/121 (45%), Positives = 68/121 (56%)
 Frame = +2

Query: 371 GRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFYGLRQYPRAWHK*F 550
           G  +KQ+DV+NAFLH  +TE VYM QP GF D N P HVC LH + YGL+Q PRAW   F
Sbjct: 234 GWDVKQMDVKNAFLHGDLTETVYMLQPAGFVDKNKPTHVCHLHKALYGLKQAPRAWFDKF 293

Query: 551 SNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAISKLIVDLSQKF*M 730
           SNYL EF F  +    SLF +  G                 N+   ++KL+ DL+  F M
Sbjct: 294 SNYLLEFGFSCSVKDLSLFIYIKGNDLILLLLYVDDMVLTGNSSATLAKLLEDLNIHFRM 353

Query: 731 K 733
           K
Sbjct: 354 K 354



 Score = 74.7 bits (182), Expect(2) = 2e-34
 Identities = 42/101 (41%), Positives = 60/101 (59%)
 Frame = +1

Query: 1   ISRSQHGIHKPNSKYVMHIQFSSETEMELTSYSQASKSPQWHRAMGLEFDALQESGIWSL 180
           ++RS+ GI KPN +Y +        E +  + ++A K P W  AM  E+D  QE+  WSL
Sbjct: 132 VTRSKKGIIKPNPRYGLLTHKVKNAEPK--TVTEALKHPGWTAAMHEEYDNCQEAQTWSL 189

Query: 181 VQPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQ 303
           V     MN+L SKWVF  K N+DGS++  K+ L+A GF Q+
Sbjct: 190 VPYTPDMNVLGSKWVFQTKLNADGSLDKLKARLVAKGFDQE 230


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  102 bits (254), Expect(2) = 2e-34
 Identities = 57/133 (42%), Positives = 79/133 (59%)
 Frame = +2

Query: 335  TIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFYG 514
            TI+IIL+LA++ G +++QLDVQNAFLH ++ EEVYM QP GF DP  PHHVC+L  + YG
Sbjct: 1034 TIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKALYG 1093

Query: 515  LRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAIS 694
            L+Q PRAW    S  L +  F  ++   SLF  + G                S++  A +
Sbjct: 1094 LKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITMFVLVYVDDIIVASSSEKATA 1153

Query: 695  KLIVDLSQKF*MK 733
             L+ DL  +F +K
Sbjct: 1154 ALLQDLKGEFALK 1166



 Score = 70.5 bits (171), Expect(2) = 2e-34
 Identities = 33/79 (41%), Positives = 51/79 (64%)
 Frame = +1

Query: 82   ELTSYSQASKSPQWHRAMGLEFDALQESGIWSLVQPQLFMNMLPSKWVFWIKRNSDGSIE 261
            E T+  +A K   W  AM  E+DAL ++  W LV PQ   N++  KWV+ IKR +DG+++
Sbjct: 944  EPTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLD 1003

Query: 262  WYKSHLMANGFYQQSGVNF 318
             YK+ L+A GF Q+ G+++
Sbjct: 1004 RYKARLVAKGFKQRYGIDY 1022


>emb|CAN77529.1| hypothetical protein VITISV_041425 [Vitis vinifera]
          Length = 1047

 Score = 98.2 bits (243), Expect(2) = 3e-34
 Identities = 53/130 (40%), Positives = 76/130 (58%)
 Frame = +2

Query: 335  TIQIILALAINFGRTIKQLDVQNAFLHQFVTEEVYMHQP*GFFDPNFPHHVCRLH*SFYG 514
            TI++ILALA++F   I+QLDV+NAFL++ + +EV+M QP GF  P +PH+VC+LH + YG
Sbjct: 841  TIRLILALAVSFQWPIRQLDVENAFLNEDLQDEVFMAQPQGFVHPQYPHYVCKLHKALYG 900

Query: 515  LRQYPRAWHK*FSNYLEEFDFIMAQVYHSLFTFHHGTXXXXXXXXXXXXXXXSNNFDAIS 694
            L+Q PRAW +     L ++ F  +Q   SLF  H  +               S+N   +S
Sbjct: 901  LKQAPRAWFQKLRVALVDYGFQSSQADTSLFIHHTTSDILILLVYVDDILVTSSNPKLVS 960

Query: 695  KLIVDLSQKF 724
              I  L  KF
Sbjct: 961  HFISYLHDKF 970



 Score = 74.3 bits (181), Expect(2) = 3e-34
 Identities = 39/106 (36%), Positives = 64/106 (60%)
 Frame = +1

Query: 1    ISRSQHGIHKPNSKYVMHIQFSSETEMELTSYSQASKSPQWHRAMGLEFDALQESGIWSL 180
            ++R++ GIHK  S       F  +T  E  +YSQA KS  W +AM  ++ AL+ +  WSL
Sbjct: 731  VTRAKSGIHKKKS-------FLMQTTSEPHTYSQAFKSEPWVQAMQHQYQALRHNHTWSL 783

Query: 181  VQPQLFMNMLPSKWVFWIKRNSDGSIEWYKSHLMANGFYQQSGVNF 318
            V P    +++  +W++ +K  S+GS+E +K+ L+A GF Q  GV++
Sbjct: 784  VPPPPSAHIVGCRWIYKLKYLSNGSVERHKARLVAQGFTQTPGVDY 829