BLASTX nr result
ID: Paeonia24_contig00033480
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00033480
(312 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 69 5e-10
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 69 9e-10
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta... 69 9e-10
ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein A... 67 2e-09
pir||S71183 RNA-directed DNA polymerase (EC 2.7.7.49) (clone NIN... 67 3e-09
pir||S65819 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N2)... 67 3e-09
gb|AAB48347.1| reverse transcriptase, partial [Arabidopsis thali... 67 3e-09
ref|XP_007022832.1| Uncharacterized protein TCM_026877 [Theobrom... 66 6e-09
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 66 6e-09
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 65 7e-09
gb|AAB48346.1| reverse transcriptase, partial [Arabidopsis thali... 65 1e-08
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 65 1e-08
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta... 65 1e-08
gb|AAB48344.1| reverse transcriptase, partial [Arabidopsis thali... 64 2e-08
pir||S65818 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N7)... 64 2e-08
ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group] g... 64 2e-08
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S... 64 2e-08
gb|AAD15377.1| putative non-LTR retroelement reverse transcripta... 64 2e-08
gb|AAD22286.1| putative non-LTR retroelement reverse transcripta... 64 2e-08
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622... 64 3e-08
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = -3
Query: 241 AVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFS--MKGILEGRTATWL 68
AVK DM KAYDR+EW F+K+VL FGF S WI W++ C+T+VS+S + G +G+
Sbjct: 467 AVKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLECVTSVSYSFLINGTPQGKVVPTR 526
Query: 67 G 65
G
Sbjct: 527 G 527
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 68.6 bits (166), Expect = 9e-10
Identities = 26/52 (50%), Positives = 41/52 (78%)
Frame = -3
Query: 259 VSGDTRAVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFSM 104
+S + A K DM KAYDR+EW F++ ++ GF+++WISWI+NC+T+VS+S+
Sbjct: 565 ISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISWIMNCVTSVSYSV 616
>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1319
Score = 68.6 bits (166), Expect = 9e-10
Identities = 26/52 (50%), Positives = 40/52 (76%)
Frame = -3
Query: 259 VSGDTRAVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFSM 104
+S + K DM KAYDR+EWSF++ +LV GF+ +WISWI+ C+T+V++S+
Sbjct: 518 ISKEFMVFKTDMSKAYDRVEWSFLQEILVALGFNDKWISWIMGCVTSVTYSV 569
>ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 727
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = -3
Query: 241 AVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFSMKGILEGRTATWLGW 62
AVKLD+EKAYD L W +IK L FGF WI+ ++NCI++VSFS+ I+ G+ GW
Sbjct: 2 AVKLDLEKAYDFLNWRYIKACLTKFGFCDNWINMVLNCISSVSFSV--IINGKPE---GW 56
Query: 61 YRP 53
++P
Sbjct: 57 FKP 59
>pir||S71183 RNA-directed DNA polymerase (EC 2.7.7.49) (clone NING8) -
Arabidopsis thaliana retrotransposon Ta16 (fragment)
gi|986867|gb|AAB48536.1| reverse transcriptase, partial
[Arabidopsis thaliana]
Length = 73
Score = 66.6 bits (161), Expect = 3e-09
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = -3
Query: 241 AVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFS 107
AVK DM KAYDR+EW F+K VL FGF WI+WI+ C+ VS+S
Sbjct: 2 AVKTDMSKAYDRIEWGFLKAVLTRFGFHENWIAWIMTCVKTVSYS 46
>pir||S65819 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N2) - Arabidopsis
thaliana retrotransposon Ta24 (fragment)
Length = 184
Score = 66.6 bits (161), Expect = 3e-09
Identities = 24/52 (46%), Positives = 39/52 (75%)
Frame = -3
Query: 259 VSGDTRAVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFSM 104
+S + A+K DM KAYDR+EWSF++ +L+ GF RW+ WI+ C++ V++S+
Sbjct: 116 ISSEFMAIKSDMSKAYDRVEWSFLRALLLALGFHQRWVEWIMTCVSTVTYSV 167
>gb|AAB48347.1| reverse transcriptase, partial [Arabidopsis thaliana]
Length = 199
Score = 66.6 bits (161), Expect = 3e-09
Identities = 24/52 (46%), Positives = 39/52 (75%)
Frame = -3
Query: 259 VSGDTRAVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFSM 104
+S + A+K DM KAYDR+EWSF++ +L+ GF RW+ WI+ C++ V++S+
Sbjct: 122 ISSEFMAIKSDMSKAYDRVEWSFLRALLLALGFHQRWVEWIMTCVSTVTYSV 173
>ref|XP_007022832.1| Uncharacterized protein TCM_026877 [Theobroma cacao]
gi|508778198|gb|EOY25454.1| Uncharacterized protein
TCM_026877 [Theobroma cacao]
Length = 2367
Score = 65.9 bits (159), Expect = 6e-09
Identities = 39/101 (38%), Positives = 56/101 (55%)
Frame = -3
Query: 304 SLLLMRSQLTLMPKDVSGDTRAVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCI 125
++LL + + + G A+KLDM KAYDRL+WSF+ +VL FGF+ +WI I CI
Sbjct: 1605 NILLAQELIGKLNTKSRGGNLALKLDMMKAYDRLDWSFLIKVLQHFGFNDQWIGMIQKCI 1664
Query: 124 TAVSFSMKGILEGRTATWLGWYRPFYQPRF*IPNPTQPNLF 2
+ FS+ +L GRT + + R Q +P P LF
Sbjct: 1665 SNCWFSL--LLNGRTEGYFKFERGLRQ-----GDPISPQLF 1698
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 65.9 bits (159), Expect = 6e-09
Identities = 25/47 (53%), Positives = 40/47 (85%)
Frame = -3
Query: 247 TRAVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFS 107
T A+KLDM KAYDR+EW F++++L+ GFD RW++ I++C+++VS+S
Sbjct: 574 TIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMSCVSSVSYS 620
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 65.5 bits (158), Expect = 7e-09
Identities = 26/53 (49%), Positives = 41/53 (77%)
Frame = -3
Query: 241 AVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFSMKGILEGR 83
A+KLDM KAYDR+EW F++++L+ GFD RW++ +++C+ VS+S I+ GR
Sbjct: 579 AMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLVMSCVATVSYSF--IINGR 629
>gb|AAB48346.1| reverse transcriptase, partial [Arabidopsis thaliana]
Length = 199
Score = 64.7 bits (156), Expect = 1e-08
Identities = 23/46 (50%), Positives = 37/46 (80%)
Frame = -3
Query: 241 AVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFSM 104
AVK D+ KAYDR+EW+F+++V++ GF RW+ WI+ C+T+VS+ +
Sbjct: 128 AVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCVTSVSYEV 173
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 64.7 bits (156), Expect = 1e-08
Identities = 23/46 (50%), Positives = 37/46 (80%)
Frame = -3
Query: 241 AVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFSM 104
AVK D+ KAYDR+EW+F+++V++ GF RW+ WI+ C+T+VS+ +
Sbjct: 934 AVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCVTSVSYEV 979
>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1094
Score = 64.7 bits (156), Expect = 1e-08
Identities = 25/52 (48%), Positives = 39/52 (75%)
Frame = -3
Query: 259 VSGDTRAVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFSM 104
+S D K DM KAYDR+EW F+K +L+ GF+S WI+W++ C+++VS+S+
Sbjct: 295 ISKDFMVFKTDMSKAYDRVEWPFLKGILLALGFNSTWINWMMACVSSVSYSV 346
>gb|AAB48344.1| reverse transcriptase, partial [Arabidopsis thaliana]
Length = 199
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = -3
Query: 241 AVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFS--MKGILEG 86
AVK DM KAYDR+EW FI+ V+ GF +W+ WI+ CIT VS+S + G +G
Sbjct: 128 AVKSDMSKAYDRIEWDFIRLVMEKMGFHPKWVEWIMQCITTVSYSFLLNGAAQG 181
>pir||S65818 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N7) - Arabidopsis
thaliana retrotransposon Ta20 (fragment)
Length = 184
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = -3
Query: 241 AVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFS--MKGILEG 86
AVK DM KAYDR+EW FI+ V+ GF +W+ WI+ CIT VS+S + G +G
Sbjct: 122 AVKSDMSKAYDRIEWDFIRLVMEKMGFHPKWVEWIMQCITTVSYSFLLNGAAQG 175
>ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group]
gi|255677700|dbj|BAH93889.1| Os07g0417700 [Oryza sativa
Japonica Group]
Length = 1011
Score = 64.3 bits (155), Expect = 2e-08
Identities = 25/55 (45%), Positives = 41/55 (74%)
Frame = -3
Query: 265 KDVSGDTRAVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFSMK 101
K+ + + A KLD+ KAY+R++W+F+++ + GF RW+SWI+ CIT+V FS+K
Sbjct: 256 KNPNSSSCAYKLDLSKAYNRVDWTFLEQSMYKLGFSHRWVSWIMECITSVRFSVK 310
>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
gi|241926916|gb|EES00061.1| hypothetical protein
SORBIDRAFT_03g001780 [Sorghum bicolor]
Length = 631
Score = 64.3 bits (155), Expect = 2e-08
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = -3
Query: 265 KDVSGDTRAVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFSMK 101
K +G A+KLDM KAYDR+EWSF++ ++ GFD +W+ I+ C+T V++ +K
Sbjct: 145 KKGAGGLAAIKLDMSKAYDRVEWSFLENMMRKMGFDEKWVQLIMKCVTTVTYKIK 199
>gb|AAD15377.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1044
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = -3
Query: 241 AVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFS 107
AVK +M KAYDR+EW FIK V+ GF WISWI+ CIT VS+S
Sbjct: 398 AVKTNMSKAYDRIEWDFIKLVMQEMGFHQTWISWILQCITTVSYS 442
>gb|AAD22286.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1311
Score = 64.3 bits (155), Expect = 2e-08
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = -3
Query: 241 AVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFS 107
AVK DM KAYDRLEW+FI+ L GF ++WISWI+ C+ VS+S
Sbjct: 796 AVKTDMSKAYDRLEWNFIETALSRMGFHTQWISWIMQCVCTVSYS 840
>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
Length = 1160
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = -3
Query: 265 KDVSGDTRAVKLDMEKAYDRLEWSFIKRVLVLFGFDSRWISWIVNCITAVSFSM 104
K + A+KLD+ KAYDRLEWSF+++++ GF +WIS I+ CI++VSFS+
Sbjct: 335 KSIRNGLVALKLDVSKAYDRLEWSFLEQIMKRLGFSHQWISLIMRCISSVSFSV 388