BLASTX nr result
ID: Paeonia24_contig00033133
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00033133
(567 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 63 4e-21
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 55 6e-18
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 55 2e-16
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 57 9e-16
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660... 63 2e-14
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 57 2e-14
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 59 5e-14
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 62 7e-14
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 57 9e-14
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 57 9e-14
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A... 65 2e-13
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A... 57 2e-13
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 64 6e-13
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali... 64 6e-13
gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana] 59 6e-13
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 62 4e-12
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 62 8e-12
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 44 2e-11
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 52 3e-11
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 60 5e-11
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 63.2 bits (152), Expect(3) = 4e-21
Identities = 36/97 (37%), Positives = 55/97 (56%)
Frame = +2
Query: 164 ITQITGFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEGXXXXXX 343
+ Q+T F+ G+ PVRYLG+PL+++KL D S L+++I +RI W K SF G
Sbjct: 578 VLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQ 637
Query: 344 XXXXXXXXY*SSLFILVKRVSRAIEQQVLSFFMVWDG 454
Y +S IL K+V + IE+++ F +W G
Sbjct: 638 SVLSSIQVYWASHLILPKKVLKDIEKRLRCF--LWAG 672
Score = 49.3 bits (116), Expect(3) = 4e-21
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +3
Query: 15 RSMANPDFKFHKCCTQVKLNHICFADDILIFSYGNSHSIRVIKD 146
R +P F++H C Q+ L+H+CFADD+L+F G+ +S+R + D
Sbjct: 502 RINCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHD 545
Score = 34.7 bits (78), Expect(3) = 4e-21
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 435 FLWSGTADNFRKAKVR*DLVCLTKN*GGLGVKSLPW*NKA 554
FLW+G KV +CL K GGLG+K L NKA
Sbjct: 668 FLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKA 707
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 54.7 bits (130), Expect(3) = 6e-18
Identities = 32/88 (36%), Positives = 44/88 (50%)
Frame = +2
Query: 191 GSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEGXXXXXXXXXXXXXXY 370
GSLP RYLGVPL S KL + L++KIT+R W+A S+ G Y
Sbjct: 753 GSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNY 812
Query: 371 *SSLFILVKRVSRAIEQQVLSFFMVWDG 454
+F L K++ +A+E F +W G
Sbjct: 813 WGQIFPLPKKLIKAVETTCRKF--LWTG 838
Score = 46.6 bits (109), Expect(3) = 6e-18
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Frame = +3
Query: 3 DLLNRSMAN----PDFKFHKCCTQVKLNHICFADDILIFSYGNSHSIRVIKDPMD-YSKS 167
+ L+R M N P+F FH C ++KL H+ FADD+L+F+ ++ SI I + +SK+
Sbjct: 660 EYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKA 719
Query: 168 PRLQ 179
LQ
Sbjct: 720 SGLQ 723
Score = 35.0 bits (79), Expect(3) = 6e-18
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = +3
Query: 435 FLWSGTADNFRKAKVR*DLVCLTKN*GGLGVKSLPW*NKAAEAK 566
FLW+GT D KA V D + K+ GGL V ++ NKAA K
Sbjct: 834 FLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILK 877
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 54.7 bits (130), Expect(3) = 2e-16
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +2
Query: 158 QQITQITGFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEG 325
+Q+ I+GF +G +P RYLG+PL S KL + +L++KI RI +W A S+ G
Sbjct: 567 EQLLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRITHWSAGLLSYAG 622
Score = 47.0 bits (110), Expect(3) = 2e-16
Identities = 19/52 (36%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Frame = +3
Query: 3 DLLNRSMAN----PDFKFHKCCTQVKLNHICFADDILIFSYGNSHSIRVIKD 146
+ LNR ++ P+F +H C ++K+ ++CFADD+L+FS G+ S++++ D
Sbjct: 485 EYLNRILSQLDKIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLD 536
Score = 29.3 bits (64), Expect(3) = 2e-16
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 432 AFLWSGTADNFRKAKVR*DLVCLTKN*GGLGVKSLPW*NKAAEAK 566
+FLW G ++ RK+ + + VC K GGL + +L NK + K
Sbjct: 658 SFLWIGNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNKISILK 702
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 57.4 bits (137), Expect(3) = 9e-16
Identities = 31/99 (31%), Positives = 51/99 (51%)
Frame = +2
Query: 158 QQITQITGFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEGXXXX 337
++I +++GF +G LP +YLGVP+ S KL+ +S L++KI +I +W A+ S+ G
Sbjct: 125 REILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAGRLQL 184
Query: 338 XXXXXXXXXXY*SSLFILVKRVSRAIEQQVLSFFMVWDG 454
Y + F K V + IE + +W G
Sbjct: 185 VNSVMFALTNYWLNCFPFPKSVLQKIE--AICRIFLWTG 221
Score = 42.7 bits (99), Expect(3) = 9e-16
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 9 LNRSMANPDFKFHKCCTQVKLNHICFADDILIFSYGNSHSIRVIKDPMD-YSKSPRLQV 182
L + + DF +H C ++K+ ++CFADD+L+FS G+ S+ ++ + +SK+ L V
Sbjct: 49 LYKMQKDGDFNYHPKCDKLKITNLCFADDLLLFSRGDKISVGMMMRAYESFSKATGLLV 107
Score = 28.9 bits (63), Expect(3) = 9e-16
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 435 FLWSGTADNFRKAKVR*DLVCLTKN*GGLGVKSLPW*NKA 554
FLW+G + RK+ V +C ++ GGL + + NKA
Sbjct: 217 FLWTGGFEGSRKSPVAWKQICSPRSCGGLNIIDIDIWNKA 256
>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
Length = 303
Score = 63.2 bits (152), Expect(3) = 2e-14
Identities = 32/68 (47%), Positives = 42/68 (61%)
Frame = +2
Query: 122 SFYSSNKRPDGLQQITQITGFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWL 301
S YSS+ R L I Q+TGF+ G P RYLGVPLLS++L ++ L++KIT I W
Sbjct: 65 SIYSSSIRTHELSHIQQLTGFSLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWS 124
Query: 302 AKKFSFEG 325
K S+ G
Sbjct: 125 RKSLSYAG 132
Score = 37.0 bits (84), Expect(3) = 2e-14
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 33 DFKFHKCCTQVKLNHICFADDILIFSYGNSHSI 131
+FKFH C ++L+H+ F DDI++ S G+ S+
Sbjct: 9 NFKFHPNCAGIQLSHLAFVDDIMLLSRGDIPSM 41
Score = 24.3 bits (51), Expect(3) = 2e-14
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 435 FLWSGTADNFRKAKVR*DLVCLTKN*GGLGVKSL 536
FLW +K V +VC K GGLG+ +L
Sbjct: 169 FLWGKADIGKKKPLVAWSVVCSPKREGGLGLFNL 202
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 57.4 bits (137), Expect(3) = 2e-14
Identities = 33/92 (35%), Positives = 47/92 (51%)
Frame = +2
Query: 179 GFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEGXXXXXXXXXXX 358
GF G+LP+RYLG+PL++ KL A++ L+ KIT+R W+ K SF G
Sbjct: 754 GFPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFG 813
Query: 359 XXXY*SSLFILVKRVSRAIEQQVLSFFMVWDG 454
+ S F+L K + IE F +W G
Sbjct: 814 SINFWMSTFLLPKGCIKRIESLCSRF--LWSG 843
Score = 33.5 bits (75), Expect(3) = 2e-14
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 42 FHKCCTQVKLNHICFADDILIFSYGNSHSIRVIKDPMD 155
+H + + ++H+ FADD++IF G S S+ I + +D
Sbjct: 683 YHPKASNLSISHLMFADDVMIFFDGGSFSLHGICETLD 720
Score = 33.1 bits (74), Expect(3) = 2e-14
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 435 FLWSGTADNFRKAKVR*DLVCLTKN*GGLGVKSLPW*NK 551
FLWSG + + KV +CL K+ GGLG++ L NK
Sbjct: 839 FLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNK 877
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 59.3 bits (142), Expect(2) = 5e-14
Identities = 38/116 (32%), Positives = 59/116 (50%)
Frame = +2
Query: 146 PDGLQQITQITGFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEG 325
P+ I Q F G+LPV+YLG+PLL+ ++T +D+ LV KI +RI W + SF G
Sbjct: 897 PNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAG 956
Query: 326 XXXXXXXXXXXXXXY*SSLFILVKRVSRAIEQQVLSFFMVWDG*QLSKS*SQIGFS 493
+ S+F L K + IE+ +F +W G L+ ++I +S
Sbjct: 957 RLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAF--LWSGPDLNTKKAKIAWS 1010
Score = 43.9 bits (102), Expect(2) = 5e-14
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 6 LLNRSMANPDFKFHKCCTQVKLNHICFADDILIFSYGNSHSIR 134
+L+++ +H C + L H+CFADDI++FS G S SI+
Sbjct: 824 MLDKAAVEKKISYHPRCRNMNLTHLCFADDIMVFSDGTSKSIQ 866
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 62.4 bits (150), Expect(3) = 7e-14
Identities = 34/86 (39%), Positives = 44/86 (51%)
Frame = +2
Query: 179 GFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEGXXXXXXXXXXX 358
GF G+ P RYLG+PLL KL +D+S L++KI +R N+W K SF G
Sbjct: 753 GFVNGTFPFRYLGLPLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYS 812
Query: 359 XXXY*SSLFILVKRVSRAIEQQVLSF 436
+ S FIL K + IEQ F
Sbjct: 813 TVNFWLSSFILPKCCLKTIEQMCNRF 838
Score = 37.0 bits (84), Expect(3) = 7e-14
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +3
Query: 6 LLNRSMANPDFKFHKCCTQVKLNHICFADDILIFSYGNSHSIRVIKDPMDYSKS 167
LL ++ +H ++V+++ + FADD++IF G + S+R IK ++ K+
Sbjct: 670 LLENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKASSLRGIKSVLESFKN 723
Score = 23.1 bits (48), Expect(3) = 7e-14
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 435 FLWSGTADNFRKAKVR*DLVCLTKN*GGLGVKSLPW*NK 551
FLW KV CL K GGLG+++ NK
Sbjct: 838 FLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNK 876
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 57.4 bits (137), Expect(3) = 9e-14
Identities = 31/92 (33%), Positives = 47/92 (51%)
Frame = +2
Query: 179 GFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEGXXXXXXXXXXX 358
GF G+ P+RYLG+PL+ KL AD+ L+ K+++R+ W++K SF G
Sbjct: 614 GFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFG 673
Query: 359 XXXY*SSLFILVKRVSRAIEQQVLSFFMVWDG 454
+ S F+L K + IE F +W G
Sbjct: 674 LINFWMSTFLLPKGCIKKIESLCSKF--LWAG 703
Score = 32.7 bits (73), Expect(3) = 9e-14
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 435 FLWSGTADNFRKAKVR*DLVCLTKN*GGLGVKSLPW*NK 551
FLW+G+ D + +KV CL K+ GGLG +S NK
Sbjct: 699 FLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNK 737
Score = 32.0 bits (71), Expect(3) = 9e-14
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 42 FHKCCTQVKLNHICFADDILIFSYGNSHSIRVIKDPMD 155
+H + ++H+ FADD++IF G S S+ I + +D
Sbjct: 543 YHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLD 580
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 57.4 bits (137), Expect(3) = 9e-14
Identities = 31/92 (33%), Positives = 47/92 (51%)
Frame = +2
Query: 179 GFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEGXXXXXXXXXXX 358
GF G+ P+RYLG+PL+ KL AD+ L+ K+++R+ W++K SF G
Sbjct: 614 GFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFG 673
Query: 359 XXXY*SSLFILVKRVSRAIEQQVLSFFMVWDG 454
+ S F+L K + IE F +W G
Sbjct: 674 LINFWMSTFLLPKGCIKKIESLCSKF--LWAG 703
Score = 32.7 bits (73), Expect(3) = 9e-14
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 435 FLWSGTADNFRKAKVR*DLVCLTKN*GGLGVKSLPW*NK 551
FLW+G+ D + +KV CL K+ GGLG +S NK
Sbjct: 699 FLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNK 737
Score = 32.0 bits (71), Expect(3) = 9e-14
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 42 FHKCCTQVKLNHICFADDILIFSYGNSHSIRVIKDPMD 155
+H + ++H+ FADD++IF G S S+ I + +D
Sbjct: 543 YHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLD 580
>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 239
Score = 64.7 bits (156), Expect(2) = 2e-13
Identities = 41/125 (32%), Positives = 60/125 (48%)
Frame = +2
Query: 122 SFYSSNKRPDGLQQITQITGFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWL 301
+ YS+ RP L I Q+TGF G P RYLGVPLLS++L ++ L++KIT I W
Sbjct: 65 AIYSAGIRPHELSHIQQLTGFNLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWS 124
Query: 302 AKKFSFEGXXXXXXXXXXXXXXY*SSLFILVKRVSRAIEQQVLSFFMVWDG*QLSKS*SQ 481
K S+ G + +F L + V I +F +W + K+ S
Sbjct: 125 RKSLSYAGKLELIRAVIQGIVNFWMKIFPLSQSVLDRINASCCNF--LWGKADIGKNKSL 182
Query: 482 IGFSL 496
I +S+
Sbjct: 183 IAWSV 187
Score = 37.0 bits (84), Expect(2) = 2e-13
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 33 DFKFHKCCTQVKLNHICFADDILIFSYGNSHSI 131
+FKFH C ++L H+ FADDI+ S G+ S+
Sbjct: 9 NFKFHPNCAGIQLFHLAFADDIMFLSRGDIPSV 41
>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 316
Score = 57.4 bits (137), Expect(3) = 2e-13
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +2
Query: 122 SFYSSNKRPDGLQQITQITGFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWL 301
+ YS+ RP L I Q+TGF+ G P RYLG PLLS++L ++ L+ KI I W
Sbjct: 98 AIYSAGIRPYELSHIQQLTGFSLGGFPFRYLGAPLLSSRLNVCHYAPLLYKIVGLIQGWN 157
Query: 302 AKKFSFEG 325
K S+ G
Sbjct: 158 KKSLSYVG 165
Score = 38.1 bits (87), Expect(3) = 2e-13
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +3
Query: 33 DFKFHKCCTQVKLNHICFADDILIFSYGN 119
+FKFH C ++L+H+ FADDI++ S G+
Sbjct: 42 NFKFHPNCAGIQLSHLAFADDIMLLSRGD 70
Score = 25.4 bits (54), Expect(3) = 2e-13
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 384 SFWSKEFP------EQ*SNKY*AFLWSGTADNFRKAKVR*DLVCLTKN*GGLGVKSL 536
+FW + FP ++ + FLWS K V +VC K GGLG+ +L
Sbjct: 179 NFWMRIFPLPQSVLDRINASCCNFLWSKADIGKNKPLVAWPVVCSPKQEGGLGLFNL 235
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 63.5 bits (153), Expect(2) = 6e-13
Identities = 35/92 (38%), Positives = 50/92 (54%)
Frame = +2
Query: 179 GFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEGXXXXXXXXXXX 358
G ++GSLPVRYLGVPL+S K+ D+ LV++I SR W A+ SF G
Sbjct: 302 GVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYS 361
Query: 359 XXXY*SSLFILVKRVSRAIEQQVLSFFMVWDG 454
+ +S+FIL + +EQ +F +W G
Sbjct: 362 TINFWASIFILPNQCLHKLEQMCNAF--LWSG 391
Score = 36.2 bits (82), Expect(2) = 6e-13
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +3
Query: 3 DLLNRSM----ANPDFKFHKCCTQVKLNHICFADDILIFSYGNSHSIRVIKDPMDYSK 164
D+L RS+ F H C + H+ FADDIL+F G+ S+ I D +D K
Sbjct: 213 DILARSLDLGAVEGRFVLHPKCLAPMITHLSFADDILVFCDGSLSSLVAILDILDVFK 270
>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 543
Score = 63.5 bits (153), Expect(2) = 6e-13
Identities = 35/92 (38%), Positives = 50/92 (54%)
Frame = +2
Query: 179 GFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEGXXXXXXXXXXX 358
G ++GSLPVRYLGVPL+S K+ D+ LV++I SR W A+ SF G
Sbjct: 302 GVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYS 361
Query: 359 XXXY*SSLFILVKRVSRAIEQQVLSFFMVWDG 454
+ +S+FIL + +EQ +F +W G
Sbjct: 362 TINFWASIFILPNQCLHKLEQMCNAF--LWSG 391
Score = 36.2 bits (82), Expect(2) = 6e-13
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +3
Query: 3 DLLNRSM----ANPDFKFHKCCTQVKLNHICFADDILIFSYGNSHSIRVIKDPMDYSK 164
D+L RS+ F H C + H+ FADDIL+F G+ S+ I D +D K
Sbjct: 213 DILARSLDLGAVEGRFVLHPKCLAPMITHLSFADDILVFCDGSLSSLVAILDILDVFK 270
>gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana]
Length = 438
Score = 59.3 bits (142), Expect(2) = 6e-13
Identities = 34/92 (36%), Positives = 46/92 (50%)
Frame = +2
Query: 179 GFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEGXXXXXXXXXXX 358
GF +LP+RYLG+PL+S KL ++F LV KI +++N+W K SF G
Sbjct: 25 GFPFANLPIRYLGLPLMSRKLKISEFEPLVVKIKAKLNFWAVKSLSFAGRLQLLSSVISG 84
Query: 359 XXXY*SSLFILVKRVSRAIEQQVLSFFMVWDG 454
+ S F L K R IE F +W G
Sbjct: 85 IVVFWMSTFRLPKGCIREIESMCARF--LWSG 114
Score = 40.4 bits (93), Expect(2) = 6e-13
Identities = 22/44 (50%), Positives = 23/44 (52%)
Frame = +3
Query: 435 FLWSGTADNFRKAKVR*DLVCLTKN*GGLGVKSLPW*NKAAEAK 566
FLWSG D KAKV VCL K GGLGV+ N A K
Sbjct: 110 FLWSGGTDEHHKAKVSWSTVCLPKAEGGLGVRKFTEWNTALNLK 153
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 61.6 bits (148), Expect(2) = 4e-12
Identities = 34/92 (36%), Positives = 48/92 (52%)
Frame = +2
Query: 179 GFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEGXXXXXXXXXXX 358
G GSLPVRYLGVPL+S K+ D+ LV++I SR W A+ SF G
Sbjct: 755 GITHGSLPVRYLGVPLMSQKMRRQDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYS 814
Query: 359 XXXY*SSLFILVKRVSRAIEQQVLSFFMVWDG 454
+ +S+FI + + +EQ +F +W G
Sbjct: 815 TINFWASVFIFPNQCLQKLEQMCNAF--LWSG 844
Score = 35.4 bits (80), Expect(2) = 4e-12
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +3
Query: 3 DLLNRSM----ANPDFKFHKCCTQVKLNHICFADDILIFSYGNSHSIRVIKDPMD 155
D+L++S+ N F H C + H+ FADD+L+FS G + SI I +D
Sbjct: 666 DVLSKSLDLGALNGLFNLHPNCLAPIITHLSFADDVLVFSDGAASSIAGILTILD 720
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 61.6 bits (148), Expect(2) = 8e-12
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +2
Query: 179 GFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEG 325
GF GSLPVRYLG+PL+S KLT A+++ L+ KIT+R N W+ + SF G
Sbjct: 651 GFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAG 699
Score = 34.3 bits (77), Expect(2) = 8e-12
Identities = 13/38 (34%), Positives = 26/38 (68%)
Frame = +3
Query: 42 FHKCCTQVKLNHICFADDILIFSYGNSHSIRVIKDPMD 155
+H +Q++++H+ FADD++IF G S S+ I + ++
Sbjct: 580 YHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVESLE 617
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 44.3 bits (103), Expect(3) = 2e-11
Identities = 28/92 (30%), Positives = 41/92 (44%)
Frame = +2
Query: 179 GFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEGXXXXXXXXXXX 358
GF +LP+RYLG+PL+S KL +++ L+ R W K SF G
Sbjct: 755 GFPISTLPIRYLGLPLMSRKLKISEYELV-----KRFRSWAVKSLSFAGRVQLITSVITG 809
Query: 359 XXXY*SSLFILVKRVSRAIEQQVLSFFMVWDG 454
+ S F+L+ + IE F +W G
Sbjct: 810 LVNFWMSTFVLLLGCVKKIESLCSRF--LWSG 839
Score = 35.4 bits (80), Expect(3) = 2e-11
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 435 FLWSGTADNFRKAKVR*DLVCLTKN*GGLGVKSL-PW 542
FLWSG+ D + AK+ VCL KN GG+ ++ PW
Sbjct: 835 FLWSGSIDASKGAKIAWSGVCLPKNEGGVALRRFTPW 871
Score = 33.9 bits (76), Expect(3) = 2e-11
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 39 KFHKCCTQVKLNHICFADDILIFSYGNSHSIRVIKDPMD 155
++H + ++H+ FADD+++F G S S+ I + +D
Sbjct: 683 QYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALD 721
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 52.0 bits (123), Expect(2) = 3e-11
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 8/133 (6%)
Frame = +2
Query: 173 ITGFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWLAKKFSFEGXXXXXXXXX 352
+ GF +G LPVRYLGV L +LT +D+ L++++ ++IN W + S+ G
Sbjct: 206 VIGFTRGYLPVRYLGVSLSPVRLTKSDYQPLLDRVKAKINSWTTRYLSYAGRLQLVGTVI 265
Query: 353 XXXXXY*SSLFILVKRVSRAIEQQVLSFF--------MVWDG*QLSKS*SQIGFSLFNQK 508
+F+L K ++ +++ F + WD + +G +
Sbjct: 266 YGMVNAWGMIFMLPKFFTKQVDRLCAGFLWGAGTTHRVSWDTCCRPRKEGGLGLRKIAEF 325
Query: 509 LRGPWSEVPSLVK 547
+ PW+ SL++
Sbjct: 326 NQDPWTIYGSLLR 338
Score = 42.0 bits (97), Expect(2) = 3e-11
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Frame = +3
Query: 6 LLNRSMANPDFKFHKCCTQVKLNHICFADDILIFSYGNSHSIRVIKDPMD--------YS 161
+L+R A H C + H+ FADDI+IF+ G + S+ +K+ +D Y
Sbjct: 124 MLDRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYL 183
Query: 162 KSPRLQVLRRGL 197
+ + ++ RGL
Sbjct: 184 NTEKTEIFLRGL 195
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 60.1 bits (144), Expect(2) = 5e-11
Identities = 37/111 (33%), Positives = 53/111 (47%)
Frame = +2
Query: 122 SFYSSNKRPDGLQQITQITGFAKGSLPVRYLGVPLLSTKLT*ADFSLLVNKITSRINYWL 301
S Y + + QQI Q G+ LP +YLGVPL S KL + L+ K+ +RIN W
Sbjct: 535 SIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEKVMARINSWT 594
Query: 302 AKKFSFEGXXXXXXXXXXXXXXY*SSLFILVKRVSRAIEQQVLSFFMVWDG 454
AKK S+ G + LFI+ ++ + IE S+ +W G
Sbjct: 595 AKKLSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSY--LWSG 643
Score = 33.1 bits (74), Expect(2) = 5e-11
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 432 AFLWSGTADNFRKAKVR*DLVCLTKN*GGLGVKSLPW*NKAAEAK 566
++LWSG +KA + D VC K GGLG+ +L N++A K
Sbjct: 638 SYLWSGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTK 682