BLASTX nr result
ID: Paeonia24_contig00032818
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00032818
(1325 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containi... 556 e-156
ref|XP_007217925.1| hypothetical protein PRUPE_ppa004873mg [Prun... 522 e-145
gb|EXC11897.1| hypothetical protein L484_005358 [Morus notabilis] 503 e-140
ref|XP_002318245.2| hypothetical protein POPTR_0012s13730g, part... 498 e-138
ref|XP_004309237.1| PREDICTED: pentatricopeptide repeat-containi... 491 e-136
emb|CBI31865.3| unnamed protein product [Vitis vinifera] 462 e-127
ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containi... 455 e-125
ref|XP_007143361.1| hypothetical protein PHAVU_007G066000g [Phas... 453 e-125
ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containi... 442 e-121
ref|XP_003604256.1| Pentatricopeptide repeat-containing protein ... 439 e-120
ref|XP_004510744.1| PREDICTED: pentatricopeptide repeat-containi... 437 e-120
ref|XP_002322445.1| pentatricopeptide repeat-containing family p... 436 e-119
ref|XP_006411826.1| hypothetical protein EUTSA_v10026749mg [Eutr... 391 e-106
ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group] g... 390 e-106
ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containi... 388 e-105
ref|XP_006653550.1| PREDICTED: pentatricopeptide repeat-containi... 387 e-105
ref|XP_006283458.1| hypothetical protein CARUB_v10004502mg [Caps... 384 e-104
ref|XP_002866920.1| pentatricopeptide repeat-containing protein ... 381 e-103
ref|NP_195514.1| pentatricopeptide repeat-containing protein [Ar... 380 e-103
ref|XP_007015003.1| Tetratricopeptide repeat-like superfamily pr... 338 2e-90
>ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38010-like
[Vitis vinifera]
Length = 590
Score = 556 bits (1433), Expect = e-156
Identities = 276/394 (70%), Positives = 317/394 (80%), Gaps = 1/394 (0%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PN+ATFV+VLVACGR+GY R G GLVVGN ++DMYVKC CL
Sbjct: 201 PNVATFVSVLVACGRMGYLSMGKGVHGLVYK------RAFGIGLVVGNALVDMYVKCECL 254
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
CEA+ +FDELP RDIVSWTS+ISGLVQCK+PK+SLELFYDMQISG+EPDRIILTSV
Sbjct: 255 CEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSAC 314
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
LDYGRWV EYI+R+GI+WD+HIGTA+VDMYAKCG +EMAL IF G+ NRNI TWN
Sbjct: 315 ASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWN 374
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYF-QMMNQ 609
G EALKHFE M+ G+RPNEVTFL ILTACCHSGLV EGR YF QM++Q
Sbjct: 375 ALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQ 434
Query: 608 QYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSK 429
+N SPRLEHYGCM+DLLCRAGLLDEA +FIRNMP+ PDVLIWGA L+ACK GN ELS+
Sbjct: 435 PFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVELSQ 494
Query: 428 NILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKP 249
IL L EL++QDSGVYVLLSNIYATN+RWDDVTRVRRLMK+KGIRK PGSSVIEVDG+
Sbjct: 495 EILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEVDGEA 554
Query: 248 HEFLVGDTSHPQSEDIHMLLDILSDQVFHYGHFS 147
HEFLVGDT+H ++EDIH+LL+IL++QV+ GHFS
Sbjct: 555 HEFLVGDTNHSRNEDIHILLNILANQVYLEGHFS 588
Score = 102 bits (254), Expect = 4e-19
Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 4/255 (1%)
Frame = -1
Query: 1196 LVVGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQI 1017
L V N ++ Y CG A +FDE+ RD+VSWT +ISG V+ E++ LF M +
Sbjct: 140 LYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMDV 199
Query: 1016 SGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEM 837
P+ SV L G+ VH + +R + +G A+VDMY KC L
Sbjct: 200 ---VPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCE 256
Query: 836 ALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCH 657
A ++F + +R+I++W ++L+ F +M +G+ P+ + +L+AC
Sbjct: 257 ARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACAS 316
Query: 656 SGLVGEGR---RYFQMMNQQYNLSPRLEHYG-CMVDLLCRAGLLDEAQEFIRNMPMRPDV 489
G + GR Y + ++++ H G +VD+ + G ++ A +P R ++
Sbjct: 317 LGALDYGRWVQEYIERQGIEWDI-----HIGTALVDMYAKCGCIEMALHIFNGIPNR-NI 370
Query: 488 LIWGAFLNACKPTGN 444
W A L G+
Sbjct: 371 FTWNALLGGLAMHGH 385
>ref|XP_007217925.1| hypothetical protein PRUPE_ppa004873mg [Prunus persica]
gi|462414387|gb|EMJ19124.1| hypothetical protein
PRUPE_ppa004873mg [Prunus persica]
Length = 487
Score = 522 bits (1345), Expect = e-145
Identities = 266/394 (67%), Positives = 305/394 (77%), Gaps = 1/394 (0%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PN+ATFV+VLVACGR+GY R G LVVGN I+DMYVKC L
Sbjct: 97 PNVATFVSVLVACGRMGYLRVGKAIHGLIFK------RSLGTNLVVGNAIVDMYVKCESL 150
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
C+AK IFDELP RDIVSWTSMISGLVQCKRP+ESLELF +MQ G++PD+IIL SV
Sbjct: 151 CDAKKIFDELPERDIVSWTSMISGLVQCKRPRESLELFCNMQTLGIKPDKIILASVLSAC 210
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
LDYGRWVHEYIDRRGIKWD+HIGT+++DMYAKCG ++MALQ F + N+ TWN
Sbjct: 211 ASLGALDYGRWVHEYIDRRGIKWDIHIGTSLIDMYAKCGCIKMALQTFNELPCGNVSTWN 270
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYF-QMMNQ 609
G EAL++FEEM +G RPN VTFL ILTACCHSGLV EGR YF QM++Q
Sbjct: 271 ALLGGLAMHGNGHEALQNFEEMTKSGTRPNAVTFLAILTACCHSGLVDEGRGYFYQMISQ 330
Query: 608 QYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSK 429
YNLSPRLEHYGCMVDLLCRAGL+DEAQE I MPM+PDVLIWGA L+A K G+ ELS+
Sbjct: 331 PYNLSPRLEHYGCMVDLLCRAGLVDEAQELINTMPMQPDVLIWGALLSAYKAKGDVELSQ 390
Query: 428 NILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKP 249
ILDRL +L+ DSGVYVLLSNIYATN+RW DVTRVR LMK+KGI+K+PGSSVIEVDGK
Sbjct: 391 EILDRLLQLKLHDSGVYVLLSNIYATNERWADVTRVRTLMKKKGIQKSPGSSVIEVDGKA 450
Query: 248 HEFLVGDTSHPQSEDIHMLLDILSDQVFHYGHFS 147
HEFLVGDTSHPQ EDIH+LL+IL++QV+ G FS
Sbjct: 451 HEFLVGDTSHPQHEDIHVLLNILANQVYLEGIFS 484
Score = 107 bits (267), Expect = 1e-20
Identities = 72/251 (28%), Positives = 121/251 (48%), Gaps = 4/251 (1%)
Frame = -1
Query: 1184 NVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGME 1005
N ++ Y CG A +FDE+P +D+VSWT +ISG V+ E++ LF+ M + +
Sbjct: 40 NSLVHFYSVCGDCGGATRVFDEMPVKDVVSWTGLISGHVKAGLFDEAISLFFRMDV---K 96
Query: 1004 PDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQI 825
P+ SV L G+ +H I +R + ++ +G A+VDMY KC SL A +I
Sbjct: 97 PNVATFVSVLVACGRMGYLRVGKAIHGLIFKRSLGTNLVVGNAIVDMYVKCESLCDAKKI 156
Query: 824 FYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLV 645
F + R+I++W E+L+ F M T G++P+++ +L+AC G +
Sbjct: 157 FDELPERDIVSWTSMISGLVQCKRPRESLELFCNMQTLGIKPDKIILASVLSACASLGAL 216
Query: 644 GEGR---RYFQMMNQQYNLSPRLEHYG-CMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWG 477
GR Y ++++ H G ++D+ + G + A + +P +V W
Sbjct: 217 DYGRWVHEYIDRRGIKWDI-----HIGTSLIDMYAKCGCIKMALQTFNELPC-GNVSTWN 270
Query: 476 AFLNACKPTGN 444
A L GN
Sbjct: 271 ALLGGLAMHGN 281
Score = 58.9 bits (141), Expect = 5e-06
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 4/177 (2%)
Frame = -1
Query: 941 GRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWNXXXXXXXX 762
GR VH + + G + DV+ ++V Y+ CG A ++F M +++++W
Sbjct: 20 GRQVHGVVVKMGFQCDVYAQNSLVHFYSVCGDCGGATRVFDEMPVKDVVSWTGLISGHVK 79
Query: 761 XXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQQYNLSPRLE 582
EA+ F M ++PN TF+ +L AC G + G+ ++ ++ +L L
Sbjct: 80 AGLFDEAISLFFRM---DVKPNVATFVSVLVACGRMGYLRVGKAIHGLIFKR-SLGTNLV 135
Query: 581 HYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNA---CK-PTGNFELSKNI 423
+VD+ + L +A++ +P R D++ W + ++ CK P + EL N+
Sbjct: 136 VGNAIVDMYVKCESLCDAKKIFDELPER-DIVSWTSMISGLVQCKRPRESLELFCNM 191
>gb|EXC11897.1| hypothetical protein L484_005358 [Morus notabilis]
Length = 584
Score = 503 bits (1296), Expect = e-140
Identities = 256/388 (65%), Positives = 297/388 (76%), Gaps = 1/388 (0%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PN+AT V+VLVACGR GY R LVV N ++DMYVKC L
Sbjct: 202 PNMATLVSVLVACGRKGYLNVGKGIHGVVFK------RPMHIPLVVSNALMDMYVKCEKL 255
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
CEAK IFDEL RDIVSWT MISGL QCK PKE+LELF +MQ SG+EPD IILT+V
Sbjct: 256 CEAKQIFDELDERDIVSWTCMISGLAQCKHPKEALELFSNMQPSGVEPDEIILTAVLSAC 315
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
LDYGRWVHEYIDRRGIKWD+ +GTAMVDMYAKCG +++AL+ F + +RNI+TWN
Sbjct: 316 ASLGALDYGRWVHEYIDRRGIKWDIQVGTAMVDMYAKCGCIDIALRTFNELPSRNIVTWN 375
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQQ 606
G EAL+ FEEM + RPNEVTFL ILTACCHSGLV EGRRYFQ M ++
Sbjct: 376 ALLGGLAMHGHGHEALRKFEEMTRSSTRPNEVTFLAILTACCHSGLVDEGRRYFQQMTRE 435
Query: 605 -YNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSK 429
YN+SPRLEHYGCMVDLLCRAGLLDEAQ I+ MPM PDVLIWGA L+ACK TGN ELS+
Sbjct: 436 SYNISPRLEHYGCMVDLLCRAGLLDEAQNLIKTMPMVPDVLIWGAILSACKITGNVELSQ 495
Query: 428 NILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKP 249
ILDRL +LE+QDSG +VLLSNIYA N+RW DVTRVRRLMKEKGI+KAPGSSVIE++G+
Sbjct: 496 EILDRLLKLESQDSGAFVLLSNIYAGNKRWADVTRVRRLMKEKGIKKAPGSSVIELNGQA 555
Query: 248 HEFLVGDTSHPQSEDIHMLLDILSDQVF 165
H+FLVGD+SHPQ++DIH++L +LS+Q F
Sbjct: 556 HKFLVGDSSHPQNDDIHVVLSLLSNQEF 583
Score = 115 bits (289), Expect = 3e-23
Identities = 72/249 (28%), Positives = 124/249 (49%)
Frame = -1
Query: 1190 VGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISG 1011
V N ++ +Y CG A+ +FDE+ RD+VSWT +ISG V+ + E++ LF M +
Sbjct: 143 VQNSLVHLYSVCGDCDGARKVFDEMLVRDVVSWTCLISGFVRTRLFDEAIALFLRMDV-- 200
Query: 1010 MEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMAL 831
EP+ L SV L+ G+ +H + +R + + + A++DMY KC L A
Sbjct: 201 -EPNMATLVSVLVACGRKGYLNVGKGIHGVVFKRPMHIPLVVSNALMDMYVKCEKLCEAK 259
Query: 830 QIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSG 651
QIF + R+I++W EAL+ F M +G+ P+E+ +L+AC G
Sbjct: 260 QIFDELDERDIVSWTCMISGLAQCKHPKEALELFSNMQPSGVEPDEIILTAVLSACASLG 319
Query: 650 LVGEGRRYFQMMNQQYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAF 471
+ GR + ++++ + ++ MVD+ + G +D A +P R +++ W A
Sbjct: 320 ALDYGRWVHEYIDRR-GIKWDIQVGTAMVDMYAKCGCIDIALRTFNELPSR-NIVTWNAL 377
Query: 470 LNACKPTGN 444
L G+
Sbjct: 378 LGGLAMHGH 386
Score = 63.9 bits (154), Expect = 1e-07
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 4/228 (1%)
Frame = -1
Query: 1094 WTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYID 915
+ +MISG + PK ++ ++ + G PD +V + GR VH I
Sbjct: 74 FNTMISGYTGSEMPKAAVLVYRRIVRDGFMPDTFTFPAVLKSCTKFLGIREGRQVHSVIV 133
Query: 914 RRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALK 735
G V++ ++V +Y+ CG + A ++F M R++++W EA+
Sbjct: 134 VMGFSCHVYVQNSLVHLYSVCGDCDGARKVFDEMLVRDVVSWTCLISGFVRTRLFDEAIA 193
Query: 734 HFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQQYNLSPRLEHYGCMVDLL 555
F M + PN T + +L AC G + G+ ++ ++ P L ++D+
Sbjct: 194 LFLRM---DVEPNMATLVSVLVACGRKGYLNVGKGIHGVVFKRPMHIP-LVVSNALMDMY 249
Query: 554 CRAGLLDEAQEFIRNMPMRPDVLIWGAFLNA---CK-PTGNFELSKNI 423
+ L EA++ + R D++ W ++ CK P EL N+
Sbjct: 250 VKCEKLCEAKQIFDELDER-DIVSWTCMISGLAQCKHPKEALELFSNM 296
>ref|XP_002318245.2| hypothetical protein POPTR_0012s13730g, partial [Populus trichocarpa]
gi|550327071|gb|EEE96465.2| hypothetical protein
POPTR_0012s13730g, partial [Populus trichocarpa]
Length = 602
Score = 498 bits (1282), Expect = e-138
Identities = 254/397 (63%), Positives = 289/397 (72%), Gaps = 1/397 (0%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PN ATFV+VLVACGR GY G GL V N ++DMYVKCGCL
Sbjct: 205 PNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAF------GVGLEVSNALMDMYVKCGCL 258
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
AK +FDEL +DIVSWTS+ISGLVQC PKE+LELF DMQ SG+EPD IILTSV
Sbjct: 259 PGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSAC 318
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
LDYGRWVHE+IDR+ IKWD+ IGTAMVDMYAKCG +EM++QIF GM ++N+LTWN
Sbjct: 319 ARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWN 378
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQ-MMNQ 609
+ L+ FEEMV G+RPNEVTFL ILTACCH GLV EGR+YF M Q
Sbjct: 379 ALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQ 438
Query: 608 QYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSK 429
QYNL PRLEHYGCMVDLLCRA LLDEA E + MPM PDV I GA L+ACK GN EL +
Sbjct: 439 QYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGNTELPQ 498
Query: 428 NILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKP 249
ILDR EL++ DSGVYVLLSNI+A NQRWDDVTR+RRLMKEKGI+K PGS+VIE+DGK
Sbjct: 499 EILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPGSTVIELDGKA 558
Query: 248 HEFLVGDTSHPQSEDIHMLLDILSDQVFHYGHFSHQF 138
HEF+VGDT HPQ + I +LL ILSDQ+F H H F
Sbjct: 559 HEFIVGDTRHPQDKRIRLLLKILSDQIFLEEHREHSF 595
Score = 110 bits (275), Expect = 1e-21
Identities = 68/251 (27%), Positives = 122/251 (48%)
Frame = -1
Query: 1196 LVVGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQI 1017
+ V N ++ Y C +A +FDE+ RD+VSWT +ISG V+ E++ LF M +
Sbjct: 144 IYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLFLRMDV 203
Query: 1016 SGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEM 837
EP+ SV L G+ +H + + + A++DMY KCG L
Sbjct: 204 ---EPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPG 260
Query: 836 ALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCH 657
A Q+F + ++I++W EAL+ F++M ++G+ P+ + +L+AC
Sbjct: 261 AKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACAR 320
Query: 656 SGLVGEGRRYFQMMNQQYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWG 477
G + GR + ++++ + ++ MVD+ + G ++ + + MP + +VL W
Sbjct: 321 LGALDYGRWVHEHIDRK-AIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHK-NVLTWN 378
Query: 476 AFLNACKPTGN 444
A LN G+
Sbjct: 379 ALLNGLAMHGH 389
Score = 59.7 bits (143), Expect = 3e-06
Identities = 44/210 (20%), Positives = 90/210 (42%)
Frame = -1
Query: 1094 WTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYID 915
+ +++SG RPK + ++ + G PD +V + GR VH I
Sbjct: 77 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 136
Query: 914 RRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALK 735
+ G ++++ ++V Y+ C A ++F M R++++W EA+
Sbjct: 137 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVG 196
Query: 734 HFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQQYNLSPRLEHYGCMVDLL 555
F M + PN TF+ +L AC G + G+ ++ + LE ++D+
Sbjct: 197 LFLRM---DVEPNAATFVSVLVACGRKGYLSVGKG-IHGLSFKSAFGVGLEVSNALMDMY 252
Query: 554 CRAGLLDEAQEFIRNMPMRPDVLIWGAFLN 465
+ G L A++ + + D++ W + ++
Sbjct: 253 VKCGCLPGAKQVFDELAEK-DIVSWTSIIS 281
>ref|XP_004309237.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38010-like
[Fragaria vesca subsp. vesca]
Length = 581
Score = 491 bits (1263), Expect = e-136
Identities = 245/385 (63%), Positives = 292/385 (75%), Gaps = 1/385 (0%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PN A+FV+V+VACGR+GY G LVVGN ++DMYVKC L
Sbjct: 201 PNAASFVSVVVACGRMGYLNVGKGVHGLILK------HSLGMDLVVGNAVVDMYVKCESL 254
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
CEAK +FDELP RDIVSWTS+ISG VQCKRP+ESL+LF +MQ G++PD+IIL+SV
Sbjct: 255 CEAKRVFDELPERDIVSWTSLISGYVQCKRPRESLDLFCEMQSLGIQPDKIILSSVLSAC 314
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
LDYGRWVHEYIDR+GIKWDVHIGTA++DMYAKCG + MAL+ F + N+ TWN
Sbjct: 315 ASLGALDYGRWVHEYIDRKGIKWDVHIGTALIDMYAKCGCINMALRTFSELPGGNVSTWN 374
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYF-QMMNQ 609
G EALK FEEM +G+RPN VTFL +LTACCHSGL+ EGR YF +M++
Sbjct: 375 ALLGGLAMHGHGDEALKKFEEMTRSGIRPNAVTFLAVLTACCHSGLIDEGRGYFNEMISP 434
Query: 608 QYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSK 429
++LSPRLEHYGCMVDLLCRAGLLDEAQ+ I MPM+PDVLI GA L+ACK + ELS+
Sbjct: 435 PHSLSPRLEHYGCMVDLLCRAGLLDEAQKLINTMPMQPDVLILGALLSACKAKDDAELSQ 494
Query: 428 NILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKP 249
ILD L LE +DSGVYVLLSNI+A N+RW D TR+RRLMK++GI+KAPGSSVIEVDGK
Sbjct: 495 EILDHLLHLEWEDSGVYVLLSNIFAANKRWADATRIRRLMKKRGIQKAPGSSVIEVDGKA 554
Query: 248 HEFLVGDTSHPQSEDIHMLLDILSD 174
HEFLVGDTSHPQ+EDIH +LDIL++
Sbjct: 555 HEFLVGDTSHPQNEDIHEVLDILAN 579
Score = 107 bits (267), Expect = 1e-20
Identities = 73/253 (28%), Positives = 123/253 (48%), Gaps = 4/253 (1%)
Frame = -1
Query: 1190 VGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISG 1011
V N ++ Y CG +AK +FDE+ RD+VSWT ++SG V+ E++ELF M +
Sbjct: 142 VENSLVHFYSVCGECGDAKKVFDEMRVRDVVSWTGLVSGHVKAGLYGEAVELFLRMDV-- 199
Query: 1010 MEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMAL 831
+P+ SV L+ G+ VH I + + D+ +G A+VDMY KC SL A
Sbjct: 200 -KPNAASFVSVVVACGRMGYLNVGKGVHGLILKHSLGMDLVVGNAVVDMYVKCESLCEAK 258
Query: 830 QIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSG 651
++F + R+I++W E+L F EM + G++P+++ +L+AC G
Sbjct: 259 RVFDELPERDIVSWTSLISGYVQCKRPRESLDLFCEMQSLGIQPDKIILSSVLSACASLG 318
Query: 650 LVGEGR---RYFQMMNQQYNLSPRLEHYG-CMVDLLCRAGLLDEAQEFIRNMPMRPDVLI 483
+ GR Y ++++ H G ++D+ + G ++ A +P +V
Sbjct: 319 ALDYGRWVHEYIDRKGIKWDV-----HIGTALIDMYAKCGCINMALRTFSELP-GGNVST 372
Query: 482 WGAFLNACKPTGN 444
W A L G+
Sbjct: 373 WNALLGGLAMHGH 385
Score = 63.2 bits (152), Expect = 3e-07
Identities = 45/207 (21%), Positives = 94/207 (45%)
Frame = -1
Query: 1085 MISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRG 906
+IS ++ +E++ ++ + G PD + +V GR VH + + G
Sbjct: 76 LISSYGNGEKSREAVLVYRRIVRDGFVPDMFTIPAVLKCCVKFLGKGEGRQVHGVVVKMG 135
Query: 905 IKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFE 726
DV++ ++V Y+ CG A ++F M R++++W EA++ F
Sbjct: 136 FACDVYVENSLVHFYSVCGECGDAKKVFDEMRVRDVVSWTGLVSGHVKAGLYGEAVELFL 195
Query: 725 EMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQQYNLSPRLEHYGCMVDLLCRA 546
M ++PN +F+ ++ AC G + G+ ++ +++L L +VD+ +
Sbjct: 196 RM---DVKPNAASFVSVVVACGRMGYLNVGKGVHGLI-LKHSLGMDLVVGNAVVDMYVKC 251
Query: 545 GLLDEAQEFIRNMPMRPDVLIWGAFLN 465
L EA+ +P R D++ W + ++
Sbjct: 252 ESLCEAKRVFDELPER-DIVSWTSLIS 277
>emb|CBI31865.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 462 bits (1189), Expect = e-127
Identities = 240/386 (62%), Positives = 275/386 (71%), Gaps = 1/386 (0%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PN+ATFV+VLVACGR+GY R G GLVVGN ++DMYVKC CL
Sbjct: 201 PNVATFVSVLVACGRMGYLSMGKGVHGLVYK------RAFGIGLVVGNALVDMYVKCECL 254
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
CEA+ +FDELP RDIVSWTS+ISGLVQCK+PK+SLELFYDMQISG+EPDRIILTSV
Sbjct: 255 CEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSAC 314
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
LDYGRWV EYI+R+GI+WD+HIGTA+VDMYAKCG +EMAL IF G+ NRNI TWN
Sbjct: 315 ASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWN 374
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYF-QMMNQ 609
G EALKHFE M+ G+RPNEVTFL ILTACCHSGLV EGR YF QM++Q
Sbjct: 375 ALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQ 434
Query: 608 QYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSK 429
+N SPRLEHYGCM+DLLCRAGLLDEA
Sbjct: 435 PFNFSPRLEHYGCMIDLLCRAGLLDEAY-------------------------------- 462
Query: 428 NILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKP 249
+GVYVLLSNIYATN+RWDDVTRVRRLMK+KGIRK PGSSVIEVDG+
Sbjct: 463 -------------NGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEVDGEA 509
Query: 248 HEFLVGDTSHPQSEDIHMLLDILSDQ 171
HEFLVGDT+H ++EDIH+LL+IL++Q
Sbjct: 510 HEFLVGDTNHSRNEDIHILLNILANQ 535
>ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38010-like
[Cucumis sativus] gi|449521082|ref|XP_004167560.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 455 bits (1170), Expect = e-125
Identities = 229/391 (58%), Positives = 277/391 (70%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
P++ T V+VL AC R G +R LV+GN ++DMYVK GC
Sbjct: 201 PSMTTLVSVLAACARNG-------DLCTGKGIHGVIERRFKVNLVLGNAMLDMYVKNGCF 253
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
EAK IFDELP RDIVSWT MI+GLVQ PK+SLELF M+ G+ PD IILTSV
Sbjct: 254 YEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSAC 313
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
LD+G WVHEYI++RGIKWD+HIGTA+VDMYAKCG +EMAL+IFY M RN TWN
Sbjct: 314 ASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWN 373
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQQ 606
EAL FE M+ +G++PNE+TFL ILTACCH GLV EGR+YF M++
Sbjct: 374 ALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKL 433
Query: 605 YNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSKN 426
YNL P+LEHYGCM+DL CRAGLL+EA E R MPM+PDVLIWG LNAC GN ELS
Sbjct: 434 YNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVGNIELSHR 493
Query: 425 ILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKPH 246
I D + EL+ DSGV+VLLSNI A NQRW +VTR+RRLMK++G+RKAPGSSVIEVDGK H
Sbjct: 494 IQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAH 553
Query: 245 EFLVGDTSHPQSEDIHMLLDILSDQVFHYGH 153
EF+VGD SH Q+E+I+ +L+++ + V+H H
Sbjct: 554 EFVVGDISHLQTEEIYKVLNLI-NSVYHESH 583
Score = 100 bits (249), Expect = 1e-18
Identities = 70/241 (29%), Positives = 115/241 (47%)
Frame = -1
Query: 1190 VGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISG 1011
V N +I Y CG A +FDE+ RD+VSW S+ISG ++ E++ +F+ M +
Sbjct: 142 VQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFRMDV-- 199
Query: 1010 MEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMAL 831
EP L SV L G+ +H I+RR K ++ +G AM+DMY K G A
Sbjct: 200 -EPSMTTLVSVLAACARNGDLCTGKGIHGVIERR-FKVNLVLGNAMLDMYVKNGCFYEAK 257
Query: 830 QIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSG 651
IF + R+I++W ++L+ F M T G+ P+ + +L+AC G
Sbjct: 258 NIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLG 317
Query: 650 LVGEGRRYFQMMNQQYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAF 471
+ G + +NQ+ + + +VD+ + G ++ A + +M R + W A
Sbjct: 318 TLDFGTWVHEYINQR-GIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQR-NTFTWNAL 375
Query: 470 L 468
L
Sbjct: 376 L 376
Score = 67.4 bits (163), Expect(2) = 2e-09
Identities = 54/269 (20%), Positives = 117/269 (43%), Gaps = 1/269 (0%)
Frame = -1
Query: 1094 WTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYID 915
+ S+I+G V + P+ ++ ++ M G PD + GR VH +
Sbjct: 73 FNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVV 132
Query: 914 RRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALK 735
+ G+ D ++ +++ Y CG A ++F M R++++WN EA+
Sbjct: 133 KLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAIS 192
Query: 734 HFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQQYNLSPRLEHYGCMVDLL 555
F M + P+ T + +L AC +G + G+ ++ +++ ++ L + M+D+
Sbjct: 193 VFFRM---DVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGN--AMLDMY 247
Query: 554 CRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSKNILDRLSELE-AQDSGVY 378
+ G EA+ +P R D++ W + + + + S + + L + D+ +
Sbjct: 248 VKNGCFYEAKNIFDELPTR-DIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIIL 306
Query: 377 VLLSNIYATNQRWDDVTRVRRLMKEKGIR 291
+ + A+ D T V + ++GI+
Sbjct: 307 TSVLSACASLGTLDFGTWVHEYINQRGIK 335
Score = 22.7 bits (47), Expect(2) = 2e-09
Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = -2
Query: 190 WTSFQIKSFIMGIFHTSS--YEISKFCGLTGNLFLLVICVTFCTHCAILYE 44
W + + G+ H + +E+ G+ N + +T C HC ++ E
Sbjct: 372 WNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDE 422
>ref|XP_007143361.1| hypothetical protein PHAVU_007G066000g [Phaseolus vulgaris]
gi|561016551|gb|ESW15355.1| hypothetical protein
PHAVU_007G066000g [Phaseolus vulgaris]
Length = 591
Score = 453 bits (1165), Expect = e-125
Identities = 229/388 (59%), Positives = 280/388 (72%), Gaps = 1/388 (0%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PN+ATFV++L ACG+LG G LVV N ++DMY+KC +
Sbjct: 205 PNVATFVSILGACGKLGCLNLGKGIHGLGLKCHY------GNELVVCNAVLDMYMKCESV 258
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
+A+ +FDE+P +DI+SWTSMISGLVQC+ P ESL+LF MQ SG EPD +ILTSV
Sbjct: 259 TDARQMFDEIPEKDIISWTSMISGLVQCQCPSESLDLFCQMQGSGFEPDGVILTSVLSAC 318
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
LDYGRWVHEYID+ IKWDVHIGT +VDMYAKCG ++MA +IF GM +RNI TWN
Sbjct: 319 ASLGLLDYGRWVHEYIDQCRIKWDVHIGTTLVDMYAKCGCIDMAKRIFSGMPSRNIRTWN 378
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYF-QMMNQ 609
G EALK FE+++ +G +PNEVTFL I TACCHSGLV EGR+YF +M +
Sbjct: 379 AYIGGLAINGHGREALKLFEDLIESGAKPNEVTFLAIFTACCHSGLVSEGRKYFNEMSSP 438
Query: 608 QYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSK 429
YNLSP LEHYGCMVDLLCRAGL+ EA E I+ MPM PDV I GA L+AC GN ++
Sbjct: 439 LYNLSPWLEHYGCMVDLLCRAGLVGEAVELIKTMPMPPDVQIIGALLSACNTYGNVGFTQ 498
Query: 428 NILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKP 249
+L L E QDSG+YVLLSN+YATN++W DV VRRLMK+KGI KAPGSS+I VDG+
Sbjct: 499 EMLKSLQNFEIQDSGIYVLLSNLYATNKKWADVRSVRRLMKQKGISKAPGSSIIRVDGRS 558
Query: 248 HEFLVGDTSHPQSEDIHMLLDILSDQVF 165
HEFLVGD SHPQSE+IH+LL+IL++Q++
Sbjct: 559 HEFLVGDNSHPQSENIHVLLNILANQIY 586
Score = 97.1 bits (240), Expect = 2e-17
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 10/285 (3%)
Frame = -1
Query: 1196 LVVGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQI 1017
+ V N ++ +Y G A +FD++ RD+VSWT +ISG V+ KE++ LF M
Sbjct: 144 IYVQNSLVHVYSISGDTVGAGKVFDDMLVRDVVSWTGLISGYVKAGLYKEAIALFLRMD- 202
Query: 1016 SGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIG------TAMVDMYAK 855
EP+ S+ L+ G+ +H G+ H G A++DMY K
Sbjct: 203 --AEPNVATFVSILGACGKLGCLNLGKGIH------GLGLKCHYGNELVVCNAVLDMYMK 254
Query: 854 CGSLEMALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVI 675
C S+ A Q+F + ++I++W E+L F +M +G P+ V +
Sbjct: 255 CESVTDARQMFDEIPEKDIISWTSMISGLVQCQCPSESLDLFCQMQGSGFEPDGVILTSV 314
Query: 674 LTACCHSGLVGEGR---RYFQMMNQQYNLSPRLEHYG-CMVDLLCRAGLLDEAQEFIRNM 507
L+AC GL+ GR Y ++++ H G +VD+ + G +D A+ M
Sbjct: 315 LSACASLGLLDYGRWVHEYIDQCRIKWDV-----HIGTTLVDMYAKCGCIDMAKRIFSGM 369
Query: 506 PMRPDVLIWGAFLNACKPTGNFELSKNILDRLSELEAQDSGVYVL 372
P R ++ W A++ G+ + + + L E A+ + V L
Sbjct: 370 PSR-NIRTWNAYIGGLAINGHGREALKLFEDLIESGAKPNEVTFL 413
>ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38010-like
[Glycine max]
Length = 595
Score = 442 bits (1138), Expect = e-121
Identities = 223/394 (56%), Positives = 280/394 (71%), Gaps = 1/394 (0%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PN+ TFV++L ACG+LG G+ LVV N ++DMY+KC +
Sbjct: 205 PNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLY------GEELVVCNAVLDMYMKCDSV 258
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
+A+ +FDE+P +DI+SWTSMI GLVQC+ P+ESL+LF MQ SG EPD +ILTSV
Sbjct: 259 TDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVILTSVLSAC 318
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
LD GRWVHEYID IKWDVHIGT +VDMYAKCG ++MA +IF GM ++NI TWN
Sbjct: 319 ASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMPSKNIRTWN 378
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYF-QMMNQ 609
G EALK FE++V +G RPNEVTFL + TACCH+GLV EGR+YF +M +
Sbjct: 379 AYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHNGLVDEGRKYFNEMTSP 438
Query: 608 QYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSK 429
YNLSP LEHYGCMVDLLCRAGL+ EA E I+ MPM PDV I GA L++ GN ++
Sbjct: 439 LYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKTMPMPPDVQILGALLSSRNTYGNVGFTQ 498
Query: 428 NILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKP 249
+L L +E QDSG+YVLLSN+YATN++W +V VRRLMK+KGI KAPGSS+I VDG
Sbjct: 499 EMLKSLPNVEFQDSGIYVLLSNLYATNKKWAEVRSVRRLMKQKGISKAPGSSIIRVDGMS 558
Query: 248 HEFLVGDTSHPQSEDIHMLLDILSDQVFHYGHFS 147
HEFLVGD SHPQSE+I++LL+IL++Q++ GH +
Sbjct: 559 HEFLVGDNSHPQSEEIYVLLNILANQIYLEGHIN 592
Score = 97.8 bits (242), Expect = 9e-18
Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 4/254 (1%)
Frame = -1
Query: 1196 LVVGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQI 1017
+ V N ++ +Y CG A +F+++ RD+VSWT +ISG V+ E++ LF M +
Sbjct: 144 IYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNEAISLFLRMNV 203
Query: 1016 SGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEM 837
EP+ S+ L+ G+ +H + + ++ + A++DMY KC S+
Sbjct: 204 ---EPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVCNAVLDMYMKCDSVTD 260
Query: 836 ALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCH 657
A ++F M ++I++W E+L F +M +G P+ V +L+AC
Sbjct: 261 ARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVILTSVLSACAS 320
Query: 656 SGLVGEGR---RYFQMMNQQYNLSPRLEHYG-CMVDLLCRAGLLDEAQEFIRNMPMRPDV 489
GL+ GR Y ++++ H G +VD+ + G +D AQ MP + ++
Sbjct: 321 LGLLDCGRWVHEYIDCHRIKWDV-----HIGTTLVDMYAKCGCIDMAQRIFNGMPSK-NI 374
Query: 488 LIWGAFLNACKPTG 447
W A++ G
Sbjct: 375 RTWNAYIGGLAING 388
>ref|XP_003604256.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505311|gb|AES86453.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 670
Score = 439 bits (1129), Expect = e-120
Identities = 227/392 (57%), Positives = 275/392 (70%), Gaps = 1/392 (0%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PN ATFV++L ACG+LG GK LVV N ++DMYVKC +
Sbjct: 280 PNAATFVSILGACGKLGCLNLGKGIHGLVSKYPH------GKELVVSNTLMDMYVKCESV 333
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
+AK +FDE+P +DIVSWTSMISGLVQ + P+ESL+LFY+M SG EPD +ILTSV
Sbjct: 334 TDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSAC 393
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
LDYGRWVHEYID IKWDVHIGT+++DMYAKCG +EMA Q+F + ++NI TWN
Sbjct: 394 ASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWN 453
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYF-QMMNQ 609
G EALK F +V +G RPNE+TFL + +ACCHSGLV EGR YF QM +
Sbjct: 454 AYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSP 513
Query: 608 QYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSK 429
YNLSP LEHYGCMVDLLCRA L++EA E I MPM PDV I GA L+A GN EL+
Sbjct: 514 PYNLSPWLEHYGCMVDLLCRAELVEEAMELINKMPMPPDVQIIGALLSASSTYGNVELTP 573
Query: 428 NILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKP 249
+L + E Q+SGVYVLLSN YA N++W +V VRRLMKEKGI KAPGSS+I VDGK
Sbjct: 574 EMLKTVRNFECQESGVYVLLSNWYANNKKWAEVRSVRRLMKEKGISKAPGSSLIRVDGKS 633
Query: 248 HEFLVGDTSHPQSEDIHMLLDILSDQVFHYGH 153
H+F+VGD +HPQSEDIH+LL+IL++Q + GH
Sbjct: 634 HKFVVGDNNHPQSEDIHVLLNILANQTYLEGH 665
Score = 97.4 bits (241), Expect = 1e-17
Identities = 62/255 (24%), Positives = 121/255 (47%), Gaps = 4/255 (1%)
Frame = -1
Query: 1196 LVVGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQI 1017
+ V N + +Y CG A +FD +P RD+VSWT +ISG ++ +++ LF M +
Sbjct: 219 MFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRMDV 278
Query: 1016 SGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEM 837
+ P+ S+ L+ G+ +H + + ++ + ++DMY KC S+
Sbjct: 279 A---PNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTD 335
Query: 836 ALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCH 657
A ++F + ++I++W E+L F EM+ +G P+ V +L+AC
Sbjct: 336 AKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACAS 395
Query: 656 SGLVGEGR---RYFQMMNQQYNLSPRLEHYG-CMVDLLCRAGLLDEAQEFIRNMPMRPDV 489
GL+ GR Y ++++ H G ++D+ + G ++ AQ+ +P + ++
Sbjct: 396 LGLLDYGRWVHEYIDHSRIKWDV-----HIGTSLIDMYAKCGCIEMAQQMFNLLPSK-NI 449
Query: 488 LIWGAFLNACKPTGN 444
W A++ G+
Sbjct: 450 RTWNAYIGGLAINGH 464
>ref|XP_004510744.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like, partial [Cicer arietinum]
Length = 599
Score = 437 bits (1124), Expect = e-120
Identities = 228/386 (59%), Positives = 270/386 (69%), Gaps = 1/386 (0%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PN+ATFV++L ACG+LG GK L V N +IDMY+KC +
Sbjct: 217 PNVATFVSILGACGKLGCLNLGKGIHGLVSKYPH------GKELAVSNTLIDMYMKCESV 270
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
+AK +F E+P +DIVSWTSMISGLVQC+ P+ESL+LF +MQ S EPD +ILTSV
Sbjct: 271 TDAKRLFHEIPEKDIVSWTSMISGLVQCQFPQESLDLFNEMQGSSFEPDGVILTSVLSAC 330
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
LDYGRWVHEYIDR IKWDV+IGT++VDMYAKCG +EMA F M ++NI TWN
Sbjct: 331 ASLGLLDYGRWVHEYIDRNRIKWDVYIGTSLVDMYAKCGCIEMAQHTFDSMPSKNIRTWN 390
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYF-QMMNQ 609
G EALK F +V +G RPNEVTFL + TACCH GLV EGR YF QM +
Sbjct: 391 AYIGGLAINGHGQEALKQFGYLVESGTRPNEVTFLAVFTACCHCGLVDEGRSYFNQMRSP 450
Query: 608 QYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSK 429
YNLSP LEHYGCMVDLLCRA L+ EA E I+ MPM PDV I GA L+A GN L+
Sbjct: 451 PYNLSPWLEHYGCMVDLLCRAELVQEAMELIKKMPMPPDVQILGALLSAFNTYGNVGLTP 510
Query: 428 NILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKP 249
+L LS E Q+SGVYVLLSN+YATN++W +V VR LMKEKGI KAPGSS+I VDGK
Sbjct: 511 EMLKSLSSFECQESGVYVLLSNLYATNKKWAEVRSVRTLMKEKGISKAPGSSIIRVDGKS 570
Query: 248 HEFLVGDTSHPQSEDIHMLLDILSDQ 171
H+FLVGD SHPQSEDIH+LL+IL++Q
Sbjct: 571 HKFLVGDNSHPQSEDIHVLLNILANQ 596
Score = 100 bits (250), Expect = 1e-18
Identities = 63/251 (25%), Positives = 121/251 (48%)
Frame = -1
Query: 1196 LVVGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQI 1017
+ V N ++ +Y CG +A +FDE+ RD+VSWT +ISG V+ E++ LF M +
Sbjct: 156 IYVQNNVVHVYSICGNNVDAGKVFDEMLVRDVVSWTGLISGYVKAGMFNEAIALFLRMDV 215
Query: 1016 SGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEM 837
EP+ S+ L+ G+ +H + + ++ + ++DMY KC S+
Sbjct: 216 ---EPNVATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELAVSNTLIDMYMKCESVTD 272
Query: 836 ALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCH 657
A ++F+ + ++I++W E+L F EM + P+ V +L+AC
Sbjct: 273 AKRLFHEIPEKDIVSWTSMISGLVQCQFPQESLDLFNEMQGSSFEPDGVILTSVLSACAS 332
Query: 656 SGLVGEGRRYFQMMNQQYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWG 477
GL+ GR + +++ + + +VD+ + G ++ AQ +MP + ++ W
Sbjct: 333 LGLLDYGRWVHEYIDRN-RIKWDVYIGTSLVDMYAKCGCIEMAQHTFDSMPSK-NIRTWN 390
Query: 476 AFLNACKPTGN 444
A++ G+
Sbjct: 391 AYIGGLAINGH 401
>ref|XP_002322445.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222869441|gb|EEF06572.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 531
Score = 436 bits (1120), Expect = e-119
Identities = 226/348 (64%), Positives = 257/348 (73%), Gaps = 1/348 (0%)
Frame = -1
Query: 1214 RECGKGLVVGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLEL 1035
R G GL V N ++DMYVKC L E K +FDELP +DIVSWTS+I G+VQCK PKE LEL
Sbjct: 170 RGFGLGLEVSNALMDMYVKCESLPEEKQVFDELPEKDIVSWTSIICGMVQCKFPKEVLEL 229
Query: 1034 FYDMQISGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAK 855
F D+Q SG+EPD IILTSV LDYGR V EYID + IKWD+ IGTA+VDMYAK
Sbjct: 230 FCDVQSSGIEPDGIILTSVLSARASPGALDYGRLVREYIDHKAIKWDIQIGTAVVDMYAK 289
Query: 854 CGSLEMALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVI 675
CG +EMA+QIF M ++N+LTWN G +AL+ FEEMV G+RPNEVTFLV
Sbjct: 290 CGCIEMAMQIFNVMPHKNVLTWNAMLNGLAMHGHGQKALQLFEEMVREGMRPNEVTFLVT 349
Query: 674 LTACCHSGLVGEGRRYFQ-MMNQQYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMR 498
LTACCH G VGEGRRYF M +QQYNL PRLEHYGCMVDLLCRAGLLDEA E + MPM
Sbjct: 350 LTACCHCGFVGEGRRYFHWMKSQQYNLPPRLEHYGCMVDLLCRAGLLDEALELTKAMPML 409
Query: 497 PDVLIWGAFLNACKPTGNFELSKNILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVR 318
PDV I GA L+ CK GN EL + ILDRL E +++DSGVYVLLSNI A NQRW DVTR+R
Sbjct: 410 PDVRIMGALLSTCKANGNVELPREILDRLVEFDSRDSGVYVLLSNILAINQRWADVTRIR 469
Query: 317 RLMKEKGIRKAPGSSVIEVDGKPHEFLVGDTSHPQSEDIHMLLDILSD 174
RLMK GI K PGSSVIEVDGK HE +VGD +PQ + I + L LSD
Sbjct: 470 RLMK-MGIEKTPGSSVIEVDGKAHEIIVGDLRYPQDKHIRLFLKSLSD 516
Score = 79.0 bits (193), Expect = 4e-12
Identities = 59/262 (22%), Positives = 113/262 (43%)
Frame = -1
Query: 1196 LVVGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQI 1017
+ V N ++ Y CG L +A +FDE+ RD VSWT +I
Sbjct: 111 IYVENSLVHFYSVCGSLDDASRVFDEMLVRDAVSWTGVI--------------------Y 150
Query: 1016 SGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEM 837
G++ I+ G+ +H I RG + + A++DMY KC SL
Sbjct: 151 PGIKGYLIL----------------GKGIHGLIIERGFGLGLEVSNALMDMYVKCESLPE 194
Query: 836 ALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCH 657
Q+F + ++I++W E L+ F ++ ++G+ P+ + +L+A
Sbjct: 195 EKQVFDELPEKDIVSWTSIICGMVQCKFPKEVLELFCDVQSSGIEPDGIILTSVLSARAS 254
Query: 656 SGLVGEGRRYFQMMNQQYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWG 477
G + GR + ++ + + ++ +VD+ + G ++ A + MP + +VL W
Sbjct: 255 PGALDYGRLVREYIDHK-AIKWDIQIGTAVVDMYAKCGCIEMAMQIFNVMPHK-NVLTWN 312
Query: 476 AFLNACKPTGNFELSKNILDRL 411
A LN G+ + + + + +
Sbjct: 313 AMLNGLAMHGHGQKALQLFEEM 334
>ref|XP_006411826.1| hypothetical protein EUTSA_v10026749mg [Eutrema salsugineum]
gi|557112996|gb|ESQ53279.1| hypothetical protein
EUTSA_v10026749mg [Eutrema salsugineum]
Length = 558
Score = 391 bits (1004), Expect = e-106
Identities = 207/360 (57%), Positives = 247/360 (68%), Gaps = 3/360 (0%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PNLAT+V LVA GR+G E GN +IDMYVKC L
Sbjct: 202 PNLATYVCALVASGRVGCLSLGRGIHGLILKKAYLISLE------TGNALIDMYVKCEQL 255
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQIS-GMEPDRIILTSVXXX 969
C+AK IF EL +D VSW SMISGLVQCK+ E++ELF MQ S G++PD ILTSV
Sbjct: 256 CDAKRIFGELQMKDKVSWNSMISGLVQCKKSNEAIELFSLMQTSSGVKPDGHILTSVLSA 315
Query: 968 XXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTW 789
+DYGRWVHEY+ GIKWD HIGTA+VDMYAKCG +E AL+IF G+ ++N+ TW
Sbjct: 316 CASLGAVDYGRWVHEYVVSAGIKWDTHIGTAIVDMYAKCGYIERALEIFNGIRSKNVCTW 375
Query: 788 NXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYF-QMMN 612
N G E+L+ FEEMV G +PNEVTFL +L ACCH+GLV EGRRYF +M
Sbjct: 376 NALLGGLAIHGHGHESLRCFEEMVKLGFKPNEVTFLAVLNACCHTGLVDEGRRYFHKMKT 435
Query: 611 QQYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNF-EL 435
++YNLSP+LEHYGC++DLLCRAGLLDEA E ++ MP++PDVLI GA L+ACK EL
Sbjct: 436 REYNLSPKLEHYGCLIDLLCRAGLLDEALELVKAMPVKPDVLICGAILSACKSRETLVEL 495
Query: 434 SKNILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDG 255
+ ILD E+E +DSGVYVLLSNIYA N+RWDDV +VRRLMK KGI K GSS IEV G
Sbjct: 496 PREILDSFLEMEFEDSGVYVLLSNIYAANRRWDDVAKVRRLMKVKGISKVTGSSAIEVYG 555
Score = 94.7 bits (234), Expect = 8e-17
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 5/270 (1%)
Frame = -1
Query: 1196 LVVGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQI 1017
+ V N ++ +Y CG L A +FD++P RD++SWT +ISG + K++L++F M
Sbjct: 141 MYVQNSLVHLYGVCGDLRSACKVFDQMPVRDVISWTGIISGYSRIGLYKKALDMFSKMD- 199
Query: 1016 SGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEM 837
EP+ L GR +H I ++ + G A++DMY KC L
Sbjct: 200 --AEPNLATYVCALVASGRVGCLSLGRGIHGLILKKAYLISLETGNALIDMYVKCEQLCD 257
Query: 836 ALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVT-TGLRPNEVTFLVILTACC 660
A +IF + ++ ++WN EA++ F M T +G++P+ +L+AC
Sbjct: 258 AKRIFGELQMKDKVSWNSMISGLVQCKKSNEAIELFSLMQTSSGVKPDGHILTSVLSACA 317
Query: 659 HSGLVGEGRRYFQMMNQQYNLSPRLE---HYG-CMVDLLCRAGLLDEAQEFIRNMPMRPD 492
G V GR +Y +S ++ H G +VD+ + G ++ A E + + +
Sbjct: 318 SLGAVDYGR-----WVHEYVVSAGIKWDTHIGTAIVDMYAKCGYIERALEIFNGIRSK-N 371
Query: 491 VLIWGAFLNACKPTGNFELSKNILDRLSEL 402
V W A L G+ S + + +L
Sbjct: 372 VCTWNALLGGLAIHGHGHESLRCFEEMVKL 401
Score = 63.9 bits (154), Expect = 1e-07
Identities = 44/211 (20%), Positives = 93/211 (44%), Gaps = 1/211 (0%)
Frame = -1
Query: 1094 WTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYID 915
+ +++S V C +P+ ++ ++ +G PD + + G+ H +
Sbjct: 74 YNTLLSSYVVCDKPRVTILVYRTFVSNGFSPDMYTFPPIFKACGKFSGIGEGKQYHGTVT 133
Query: 914 RRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALK 735
R G D+++ ++V +Y CG L A ++F M R++++W +AL
Sbjct: 134 RMGFSDDMYVQNSLVHLYGVCGDLRSACKVFDQMPVRDVISWTGIISGYSRIGLYKKALD 193
Query: 734 HFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRR-YFQMMNQQYNLSPRLEHYGCMVDL 558
F +M PN T++ L A G + GR + ++ + Y +S LE ++D+
Sbjct: 194 MFSKM---DAEPNLATYVCALVASGRVGCLSLGRGIHGLILKKAYLIS--LETGNALIDM 248
Query: 557 LCRAGLLDEAQEFIRNMPMRPDVLIWGAFLN 465
+ L +A+ + M+ D + W + ++
Sbjct: 249 YVKCEQLCDAKRIFGELQMK-DKVSWNSMIS 278
>ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa
Japonica Group] gi|113564720|dbj|BAF15063.1| Os04g0488200
[Oryza sativa Japonica Group] gi|125548801|gb|EAY94623.1|
hypothetical protein OsI_16400 [Oryza sativa Indica
Group]
Length = 598
Score = 390 bits (1001), Expect = e-106
Identities = 198/386 (51%), Positives = 257/386 (66%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PN T +VLVACG LG +RE L+VGN ++DMYVKC L
Sbjct: 214 PNEVTLASVLVACGNLG------TARAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKL 267
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
A+ +FD L RDIVSWT MISGLVQCKRP E+LE+F MQISG++PD+++L++V
Sbjct: 268 DLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSAC 327
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
L+ GRWVHEYI+R+GI+WDVH+GT++VDMY KCG L+ A+ IF M +N+ +WN
Sbjct: 328 ASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWN 387
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQQ 606
G EAL F+ MV +GL PNEVTF+ +L ACCHSGLV EGR+ F++M +
Sbjct: 388 ALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKS 447
Query: 605 YNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSKN 426
Y LSP +HYGCMVDLL RAGL+ EA + I+ MPMRP V W L+AC+ G + S+
Sbjct: 448 YKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQ 507
Query: 425 ILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKPH 246
IL + ELE+ +G+YVLLSN+YA + RW DV + R M EKG++K PGSSVIEV+GK
Sbjct: 508 ILMHIHELESSGNGIYVLLSNMYAVSDRWADVGKARGFMNEKGMQKEPGSSVIEVNGKTC 567
Query: 245 EFLVGDTSHPQSEDIHMLLDILSDQV 168
EFLVG +H +D+ +L IL Q+
Sbjct: 568 EFLVGQQNHLYMDDVRAMLSILMKQI 593
Score = 119 bits (298), Expect = 3e-24
Identities = 82/309 (26%), Positives = 143/309 (46%), Gaps = 4/309 (1%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
P+ T L AC RLG R + V N ++ Y CG
Sbjct: 115 PDGYTLPAALKACARLGGGLREGCQAHAVAEKAGFLGR-----VPVQNALVTFYGACGQC 169
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
+A+ +FDE+ RD+VSWT+++S + E+L + +M ++ P+ + L SV
Sbjct: 170 GDARKVFDEMAERDVVSWTALLSAFTRGGMFMEALGVLAEMDVT---PNEVTLASVLVAC 226
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
G+ VH + RR + ++ +G A++DMY KC L++A ++F + R+I++W
Sbjct: 227 GNLGTARAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWT 286
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGR---RYFQMM 615
EAL+ F M +G++P++V +L+AC G + GR Y +
Sbjct: 287 VMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERK 346
Query: 614 NQQYNLSPRLEHYG-CMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFE 438
++++ H G +VD+ + G LD A + MP++ +V W A +N G
Sbjct: 347 GIEWDV-----HVGTSVVDMYVKCGCLDTAVSIFQEMPLK-NVSSWNALINGFALHGRGR 400
Query: 437 LSKNILDRL 411
+ + DR+
Sbjct: 401 EALDCFDRM 409
>ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38010-like
[Brachypodium distachyon]
Length = 593
Score = 388 bits (996), Expect = e-105
Identities = 198/387 (51%), Positives = 258/387 (66%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PN T VLVACGRLG +RE L+VGN ++DMYVKC L
Sbjct: 209 PNEGTLACVLVACGRLG------AARAGKAVHGWYLRRESDLKLIVGNAVLDMYVKCEKL 262
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
A+ +FD L RD++SWT MISGLVQCK P ++LE+F +MQ S ++PD+++L++V
Sbjct: 263 DLARRVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSAC 322
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
L+ GRWVHEYI+R+GI+WDVH+GT++VDMYAKCG LE +L IF M +N+ +WN
Sbjct: 323 TSLGALESGRWVHEYIERKGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSWN 382
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQQ 606
G EAL+HF+ MV +GL PNEV+F+++L ACCHSGLV EG + F+ M
Sbjct: 383 ALINGFALHGHGREALEHFDRMVASGLAPNEVSFIIVLGACCHSGLVQEGLQLFESMKNS 442
Query: 605 YNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSKN 426
Y LSP EHYG +VDLL RAGL+ EA + MPMRP V WGA L+AC+ + S+
Sbjct: 443 YKLSPWEEHYGSVVDLLGRAGLIHEAYSVTKAMPMRPAVFTWGALLSACQAHRQVDFSQQ 502
Query: 425 ILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKPH 246
IL + ELE+ +SGVY LLSNIYA N RW DV RVR LM EKG++K PGSSVIEV+GK
Sbjct: 503 ILRHVHELESSESGVYALLSNIYAVNHRWADVKRVRGLMSEKGLQKEPGSSVIEVNGKTS 562
Query: 245 EFLVGDTSHPQSEDIHMLLDILSDQVF 165
EF+VG +H ++I +L IL +Q++
Sbjct: 563 EFVVGQKNHKNVDEICAMLSILMEQIY 589
Score = 111 bits (278), Expect = 6e-22
Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 4/266 (1%)
Frame = -1
Query: 1196 LVVGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQI 1017
L V N ++ +Y CG +A+ +FDE+ RD+VSWT+++S V+ R E+L L M +
Sbjct: 148 LPVRNALVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFVRGGRFAEALVLVGQMDV 207
Query: 1016 SGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEM 837
P+ L V G+ VH + RR + +G A++DMY KC L++
Sbjct: 208 ---VPNEGTLACVLVACGRLGAARAGKAVHGWYLRRESDLKLIVGNAVLDMYVKCEKLDL 264
Query: 836 ALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCH 657
A ++F + R++++W +AL+ F EM + ++P++V +L+AC
Sbjct: 265 ARRVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTS 324
Query: 656 SGLVGEGR---RYFQMMNQQYNLSPRLEHYG-CMVDLLCRAGLLDEAQEFIRNMPMRPDV 489
G + GR Y + ++++ H G +VD+ + G L+ + R MP++ ++
Sbjct: 325 LGALESGRWVHEYIERKGIEWDV-----HVGTSLVDMYAKCGCLETSLSIFRKMPLK-NL 378
Query: 488 LIWGAFLNACKPTGNFELSKNILDRL 411
W A +N G+ + DR+
Sbjct: 379 SSWNALINGFALHGHGREALEHFDRM 404
>ref|XP_006653550.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38010-like
[Oryza brachyantha]
Length = 593
Score = 387 bits (995), Expect = e-105
Identities = 200/390 (51%), Positives = 257/390 (65%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PN T + LVACGRLG RE +VGN ++DMYVKC L
Sbjct: 208 PNEGTLASTLVACGRLGMAHAGKAVHGWYVK------REKELSPIVGNALLDMYVKCEKL 261
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
A+ +FD L RDIVSWT MISG VQCKR E+LELF MQ SG++PD+++L++V
Sbjct: 262 DLARRVFDMLLARDIVSWTVMISGSVQCKRSSEALELFNAMQTSGVKPDKVVLSTVLSAC 321
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
L+ GRWVHEYI+R+GI+WDVH+GT++VDMY KCG L+ A+ IF M +N+ +WN
Sbjct: 322 ASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQKMPLKNVSSWN 381
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQQ 606
G EAL F+ MV +GL PNEVTF+ +L ACCHSGLV +GR+ F++M +
Sbjct: 382 ALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQKGRQLFELMTKS 441
Query: 605 YNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSKN 426
Y LS EHYGCMVDLL RAGL+ EA + I+ MPMRP VL WGA L+AC+ G + S+
Sbjct: 442 YKLSVWEEHYGCMVDLLGRAGLIQEAYDVIKAMPMRPSVLTWGALLSACQAHGWIDFSQQ 501
Query: 425 ILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKPH 246
IL R+ ELE +GVYVLLSN+YA + RW DV +VR M EKG++K PGSSVIEV+GK
Sbjct: 502 ILTRVHELEPSGNGVYVLLSNVYAVSDRWADVRKVRGFMNEKGMQKEPGSSVIEVNGKTC 561
Query: 245 EFLVGDTSHPQSEDIHMLLDILSDQVFHYG 156
EFLVG +H +D+ +L +L Q++ G
Sbjct: 562 EFLVGQQNHLYMDDVCAMLSVLMKQIYLNG 591
Score = 115 bits (288), Expect = 4e-23
Identities = 73/264 (27%), Positives = 131/264 (49%), Gaps = 4/264 (1%)
Frame = -1
Query: 1190 VGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISG 1011
V N ++ +Y CG +A+ +FDE+ RD+VSWT+++S + E+LE+ +M ++
Sbjct: 149 VQNALVMLYGACGQPGDARRVFDEMTERDVVSWTALLSVFTRGGMFAEALEVLREMDVT- 207
Query: 1010 MEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMAL 831
P+ L S G+ VH + +R + +G A++DMY KC L++A
Sbjct: 208 --PNEGTLASTLVACGRLGMAHAGKAVHGWYVKREKELSPIVGNALLDMYVKCEKLDLAR 265
Query: 830 QIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSG 651
++F + R+I++W EAL+ F M T+G++P++V +L+AC G
Sbjct: 266 RVFDMLLARDIVSWTVMISGSVQCKRSSEALELFNAMQTSGVKPDKVVLSTVLSACASLG 325
Query: 650 LVGEGR---RYFQMMNQQYNLSPRLEHYG-CMVDLLCRAGLLDEAQEFIRNMPMRPDVLI 483
+ GR Y + ++++ H G +VD+ + G LD A + MP++ +V
Sbjct: 326 ALESGRWVHEYIERKGIEWDV-----HVGTSVVDMYVKCGCLDTAVSIFQKMPLK-NVSS 379
Query: 482 WGAFLNACKPTGNFELSKNILDRL 411
W A +N G + + DR+
Sbjct: 380 WNALINGFALHGRGREALDCFDRM 403
>ref|XP_006283458.1| hypothetical protein CARUB_v10004502mg [Capsella rubella]
gi|482552163|gb|EOA16356.1| hypothetical protein
CARUB_v10004502mg [Capsella rubella]
Length = 556
Score = 384 bits (986), Expect = e-104
Identities = 199/357 (55%), Positives = 249/357 (69%), Gaps = 3/357 (0%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PNLAT+V LV+ GR+G KR L GN +IDMYVKC L
Sbjct: 202 PNLATYVCALVSSGRVG------CLSLGQRIHGLILKRASLISLETGNALIDMYVKCDQL 255
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQIS-GMEPDRIILTSVXXX 969
+A +F EL +D VSW SMISGLVQCKRP E++ELF MQ S G++PD ILTSV
Sbjct: 256 SDAMRVFGELQKKDKVSWNSMISGLVQCKRPNEAIELFSRMQTSSGIKPDGHILTSVLSA 315
Query: 968 XXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTW 789
+DYGRWVHEY+ GIKWD +IGTA+VDMYAKCG +E +L+IF G+ ++N+ TW
Sbjct: 316 CASSGAVDYGRWVHEYVVSAGIKWDTYIGTAIVDMYAKCGCIETSLEIFKGIRSKNVSTW 375
Query: 788 NXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYF-QMMN 612
N G E+L++FEEMV G +PN+VTFL +L ACCH+GLV EGR+YF +M
Sbjct: 376 NALLGGLAIHGHGHESLQYFEEMVDLGFKPNQVTFLAVLNACCHTGLVDEGRKYFHKMKT 435
Query: 611 QQYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGN-FEL 435
++YNLSP+LEHYGC++DLLCRAGL+DEA + ++ MP++PDV I GA L+ACK G EL
Sbjct: 436 RKYNLSPKLEHYGCLIDLLCRAGLIDEALDLVKAMPVKPDVRICGAILSACKSRGTLIEL 495
Query: 434 SKNILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIE 264
K ILD E+E +DSGVYVLLSNI+A N+RWDDV+R+RRLMK +GI K PGSS IE
Sbjct: 496 PKEILDSFLEMEFEDSGVYVLLSNIFAANKRWDDVSRIRRLMKVRGISKVPGSSAIE 552
Score = 97.4 bits (241), Expect = 1e-17
Identities = 77/313 (24%), Positives = 136/313 (43%), Gaps = 5/313 (1%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
P++ TF V ACG+ + V N ++ +Y CG
Sbjct: 104 PDMFTFPPVFKACGKFSGIGEGKQIHGIVTKMGF------SDDIYVQNSLVHLYGVCGDS 157
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
A +FD++P RD+VSWT +I+G + KE+L+ F M + EP+
Sbjct: 158 GYACKVFDQMPVRDVVSWTGIITGFTRTGLYKEALDTFSRMNV---EPNLATYVCALVSS 214
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
L G+ +H I +R + G A++DMY KC L A+++F + ++ ++WN
Sbjct: 215 GRVGCLSLGQRIHGLILKRASLISLETGNALIDMYVKCDQLSDAMRVFGELQKKDKVSWN 274
Query: 785 XXXXXXXXXXXGCEALKHFEEMVT-TGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQ 609
EA++ F M T +G++P+ +L+AC SG V GR
Sbjct: 275 SMISGLVQCKRPNEAIELFSRMQTSSGIKPDGHILTSVLSACASSGAVDYGR-----WVH 329
Query: 608 QYNLSPRLE---HYG-CMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNF 441
+Y +S ++ + G +VD+ + G ++ + E + + + +V W A L G+
Sbjct: 330 EYVVSAGIKWDTYIGTAIVDMYAKCGCIETSLEIFKGIRSK-NVSTWNALLGGLAIHGHG 388
Query: 440 ELSKNILDRLSEL 402
S + + +L
Sbjct: 389 HESLQYFEEMVDL 401
Score = 62.4 bits (150), Expect = 4e-07
Identities = 40/210 (19%), Positives = 90/210 (42%)
Frame = -1
Query: 1094 WTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYID 915
+ +++S C +P+ ++ ++ +G PD V + G+ +H +
Sbjct: 74 YNTLLSSYAVCDKPRVTILVYRAFVSNGFSPDMFTFPPVFKACGKFSGIGEGKQIHGIVT 133
Query: 914 RRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALK 735
+ G D+++ ++V +Y CG A ++F M R++++W EAL
Sbjct: 134 KMGFSDDIYVQNSLVHLYGVCGDSGYACKVFDQMPVRDVVSWTGIITGFTRTGLYKEALD 193
Query: 734 HFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQQYNLSPRLEHYGCMVDLL 555
F M + PN T++ L + G + G+R ++ ++ +L LE ++D+
Sbjct: 194 TFSRM---NVEPNLATYVCALVSSGRVGCLSLGQRIHGLILKRASLI-SLETGNALIDMY 249
Query: 554 CRAGLLDEAQEFIRNMPMRPDVLIWGAFLN 465
+ L +A + + D + W + ++
Sbjct: 250 VKCDQLSDAMRVFGEL-QKKDKVSWNSMIS 278
>ref|XP_002866920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312756|gb|EFH43179.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 559
Score = 381 bits (978), Expect = e-103
Identities = 203/357 (56%), Positives = 244/357 (68%), Gaps = 3/357 (0%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PNLAT+V LV+ GR+G KR L GN +IDMYVKC L
Sbjct: 202 PNLATYVCALVSSGRVG------CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQL 255
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQIS-GMEPDRIILTSVXXX 969
+A +F EL +D VSW SMISGLV C+R E++ELF MQ S G++PD ILTSV
Sbjct: 256 SDAMTVFGELQKKDKVSWNSMISGLVHCERSNEAIELFSMMQTSSGIKPDGHILTSVLSA 315
Query: 968 XXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTW 789
+DYGRWVHEY+ GIKWD HIGTA+VDMYAKCG +E AL+IF G+ +N+ TW
Sbjct: 316 CASLGAVDYGRWVHEYVLSAGIKWDTHIGTAIVDMYAKCGYIETALKIFNGIRRKNVFTW 375
Query: 788 NXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYF-QMMN 612
N G E+L++FEEMV G +PN VTFL IL ACCH+GLV EGRRYF +M
Sbjct: 376 NALLGGLAIHGHGHESLRYFEEMVKLGFKPNLVTFLAILNACCHTGLVDEGRRYFHKMKT 435
Query: 611 QQYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGN-FEL 435
++YNLSP+LEHYGC++DL CRAGLLDEA E I+ MP++PDV I GA L+ACK G EL
Sbjct: 436 REYNLSPKLEHYGCLIDLFCRAGLLDEALELIKAMPVKPDVRICGAVLSACKSRGTLMEL 495
Query: 434 SKNILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIE 264
K ILD E+E +DSGVYVLLSNI+A N+RWDDV+R+RRLMK KGI K PGSS IE
Sbjct: 496 PKEILDSFLEMEFEDSGVYVLLSNIFAANRRWDDVSRIRRLMKVKGISKVPGSSSIE 552
Score = 97.8 bits (242), Expect = 9e-18
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 5/270 (1%)
Frame = -1
Query: 1196 LVVGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQI 1017
+ V N ++ Y CG A +FD++P RD+VSWT +I+G + KE+L+ F M +
Sbjct: 141 IYVQNSLVHFYGVCGESRNACKVFDQMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDV 200
Query: 1016 SGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEM 837
EP+ L G+ +H I +R + G A++DMY KC L
Sbjct: 201 ---EPNLATYVCALVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSD 257
Query: 836 ALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVT-TGLRPNEVTFLVILTACC 660
A+ +F + ++ ++WN EA++ F M T +G++P+ +L+AC
Sbjct: 258 AMTVFGELQKKDKVSWNSMISGLVHCERSNEAIELFSMMQTSSGIKPDGHILTSVLSACA 317
Query: 659 HSGLVGEGRRYFQMMNQQYNLSPRLE---HYG-CMVDLLCRAGLLDEAQEFIRNMPMRPD 492
G V GR +Y LS ++ H G +VD+ + G ++ A + I N R +
Sbjct: 318 SLGAVDYGR-----WVHEYVLSAGIKWDTHIGTAIVDMYAKCGYIETALK-IFNGIRRKN 371
Query: 491 VLIWGAFLNACKPTGNFELSKNILDRLSEL 402
V W A L G+ S + + +L
Sbjct: 372 VFTWNALLGGLAIHGHGHESLRYFEEMVKL 401
Score = 58.5 bits (140), Expect = 6e-06
Identities = 40/211 (18%), Positives = 90/211 (42%)
Frame = -1
Query: 1097 SWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYI 918
S+ +++S C +P+ ++ ++ +G PD V + G+ +H +
Sbjct: 73 SYNTLLSSYAVCDKPRMTIFVYRVFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGTV 132
Query: 917 DRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWNXXXXXXXXXXXGCEAL 738
+ G D+++ ++V Y CG A ++F M R++++W EAL
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFDQMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 737 KHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQQYNLSPRLEHYGCMVDL 558
F +M + PN T++ L + G + G+ ++ ++ +L LE ++D+
Sbjct: 193 DTFSKM---DVEPNLATYVCALVSSGRVGCLSLGKGIHGLILKRASLI-SLETGNALIDM 248
Query: 557 LCRAGLLDEAQEFIRNMPMRPDVLIWGAFLN 465
+ L +A + + D + W + ++
Sbjct: 249 YVKCEQLSDAMTVFGEL-QKKDKVSWNSMIS 278
>ref|NP_195514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213618|sp|Q9SZK1.1|PP355_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g38010 gi|4467107|emb|CAB37541.1| putative protein
[Arabidopsis thaliana] gi|7270784|emb|CAB80466.1|
putative protein [Arabidopsis thaliana]
gi|332661463|gb|AEE86863.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 380 bits (975), Expect = e-103
Identities = 202/357 (56%), Positives = 246/357 (68%), Gaps = 3/357 (0%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
PNLAT+V VLV+ GR+G KR L GN +IDMYVKC L
Sbjct: 202 PNLATYVCVLVSSGRVG------CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQL 255
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQIS-GMEPDRIILTSVXXX 969
+A +F EL +D VSW SMISGLV C+R KE+++LF MQ S G++PD ILTSV
Sbjct: 256 SDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSA 315
Query: 968 XXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTW 789
+D+GRWVHEYI GIKWD HIGTA+VDMYAKCG +E AL+IF G+ ++N+ TW
Sbjct: 316 CASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTW 375
Query: 788 NXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYF-QMMN 612
N G E+L++FEEMV G +PN VTFL L ACCH+GLV EGRRYF +M +
Sbjct: 376 NALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKS 435
Query: 611 QQYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGN-FEL 435
++YNL P+LEHYGCM+DLLCRAGLLDEA E ++ MP++PDV I GA L+ACK G EL
Sbjct: 436 REYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMEL 495
Query: 434 SKNILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIE 264
K ILD ++E +DSGVYVLLSNI+A N+RWDDV R+RRLMK KGI K PGSS IE
Sbjct: 496 PKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 96.3 bits (238), Expect = 3e-17
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 5/248 (2%)
Frame = -1
Query: 1196 LVVGNVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQI 1017
+ V N ++ Y CG A +F E+P RD+VSWT +I+G + KE+L+ F M +
Sbjct: 141 IYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDV 200
Query: 1016 SGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEM 837
EP+ V L G+ +H I +R + G A++DMY KC L
Sbjct: 201 ---EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSD 257
Query: 836 ALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVT-TGLRPNEVTFLVILTACC 660
A+++F + ++ ++WN EA+ F M T +G++P+ +L+AC
Sbjct: 258 AMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACA 317
Query: 659 HSGLVGEGRRYFQMMNQQYNLSPRLE---HYG-CMVDLLCRAGLLDEAQEFIRNMPMRPD 492
G V GR +Y L+ ++ H G +VD+ + G ++ A E + + +
Sbjct: 318 SLGAVDHGR-----WVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK-N 371
Query: 491 VLIWGAFL 468
V W A L
Sbjct: 372 VFTWNALL 379
Score = 62.4 bits (150), Expect = 4e-07
Identities = 47/239 (19%), Positives = 102/239 (42%)
Frame = -1
Query: 1097 SWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYI 918
S+ +++S C +P+ ++ + +G PD V + G+ +H +
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 917 DRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWNXXXXXXXXXXXGCEAL 738
+ G D+++ ++V Y CG A ++F M R++++W EAL
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 737 KHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQQYNLSPRLEHYGCMVDL 558
F +M + PN T++ +L + G + G+ ++ ++ +L LE ++D+
Sbjct: 193 DTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLI-SLETGNALIDM 248
Query: 557 LCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSKNILDRLSELEAQDSGV 381
+ L +A + + D + W + ++ + E SK +D S ++ SG+
Sbjct: 249 YVKCEQLSDAMRVFGELE-KKDKVSWNSMISGLV---HCERSKEAIDLFSLMQT-SSGI 302
>ref|XP_007015003.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508785366|gb|EOY32622.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 630
Score = 338 bits (868), Expect = 2e-90
Identities = 165/392 (42%), Positives = 251/392 (64%)
Frame = -1
Query: 1325 PNLATFVTVLVACGRLGYXXXXXXXXXXXXXXXXXXKRECGKGLVVGNVIIDMYVKCGCL 1146
P+ T V VL AC RLG + G + V N ++D+Y+KCG +
Sbjct: 237 PDKMTLVVVLSACSRLG-----DLSLGTQIHENICNFHDIGSDVFVDNALVDVYMKCGDV 291
Query: 1145 CEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGMEPDRIILTSVXXXX 966
A+ +F+ +P +++VSW SMISGLVQ + KE+L++F+DMQ G++PD + L +V
Sbjct: 292 DSARQLFNLMPVKNVVSWNSMISGLVQQGQFKEALDVFHDMQKIGLKPDNVTLVAVLNAC 351
Query: 965 XXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMVDMYAKCGSLEMALQIFYGMFNRNILTWN 786
L++G+WVH Y+D+ IK D IG A+VDMYAKCGS+E A +F+ M R++ ++
Sbjct: 352 GNLGKLEFGKWVHAYVDKNRIKADGFIGNALVDMYAKCGSVEQAFGVFHSMKCRDVFSYT 411
Query: 785 XXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGLVGEGRRYFQMMNQQ 606
AL+ F EM G++P++VTF+ +L+AC H+GLV EG ++F+ M++
Sbjct: 412 AMIVGFAMNGEAERALEIFAEMPVVGVKPDDVTFVGVLSACSHAGLVEEGWKHFEDMSRV 471
Query: 605 YNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRNMPMRPDVLIWGAFLNACKPTGNFELSKN 426
YNL P+ EHYGCMVDLL RAGL+ EA+EFI NMP+ PD +WGA L AC G EL ++
Sbjct: 472 YNLQPQTEHYGCMVDLLGRAGLISEAEEFIANMPIEPDAFVWGALLGACSIHGKVELGES 531
Query: 425 ILDRLSELEAQDSGVYVLLSNIYATNQRWDDVTRVRRLMKEKGIRKAPGSSVIEVDGKPH 246
++++L ++E G Y+L+SNIY++ RW D ++R+ MKE+ ++K PG S+IEV+G +
Sbjct: 532 VMEKLVDIEPVRDGAYILMSNIYSSANRWKDALKLRKAMKERKLKKTPGCSLIEVNGIVY 591
Query: 245 EFLVGDTSHPQSEDIHMLLDILSDQVFHYGHF 150
EF GD SHP++E++ LL+ ++ + +G F
Sbjct: 592 EFRKGDKSHPRNEELRKLLEEMAIHLQSHGQF 623
Score = 115 bits (289), Expect = 3e-23
Identities = 82/307 (26%), Positives = 145/307 (47%), Gaps = 13/307 (4%)
Frame = -1
Query: 1184 NVIIDMYVKCGCLCEAKLIFDELPGRDIVSWTSMISGLVQCKRPKESLELFYDMQISGME 1005
N ++ +Y CG + + +FD+ P RD+VSWT++I V+ KE+++ ++DM +
Sbjct: 177 NTLMRLYAVCGIIDYVRNLFDQSPERDLVSWTTIIQAFVKTGFAKEAIQAYFDMCRENLR 236
Query: 1004 PDRIILTSVXXXXXXXXXLDYGRWVHEYI-DRRGIKWDVHIGTAMVDMYAKCGSLEMALQ 828
PD++ L V L G +HE I + I DV + A+VD+Y KCG ++ A Q
Sbjct: 237 PDKMTLVVVLSACSRLGDLSLGTQIHENICNFHDIGSDVFVDNALVDVYMKCGDVDSARQ 296
Query: 827 IFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEVTFLVILTACCHSGL 648
+F M +N+++WN EAL F +M GL+P+ VT + +L AC + G
Sbjct: 297 LFNLMPVKNVVSWNSMISGLVQQGQFKEALDVFHDMQKIGLKPDNVTLVAVLNACGNLGK 356
Query: 647 VGEGRRYFQMMNQQYNLSPRLEHYG----CMVDLLCRAGLLDEAQEFIRNMPMRPDVLIW 480
+ G+ +++ R++ G +VD+ + G +++A +M R DV +
Sbjct: 357 LEFGKWVHAYVDKN-----RIKADGFIGNALVDMYAKCGSVEQAFGVFHSMKCR-DVFSY 410
Query: 479 GAFLNACKPTGNFELSKNILDRLSELEAQDS-----GVYVLLSNIYATNQRW---DDVTR 324
A + G E + I + + + GV S+ + W +D++R
Sbjct: 411 TAMIVGFAMNGEAERALEIFAEMPVVGVKPDDVTFVGVLSACSHAGLVEEGWKHFEDMSR 470
Query: 323 VRRLMKE 303
V L +
Sbjct: 471 VYNLQPQ 477
Score = 74.7 bits (182), Expect = 8e-11
Identities = 43/223 (19%), Positives = 107/223 (47%)
Frame = -1
Query: 1049 ESLELFYDMQISGMEPDRIILTSVXXXXXXXXXLDYGRWVHEYIDRRGIKWDVHIGTAMV 870
E++ L+ +M G+ PD + V L+ G+ +H + + + +V++ ++
Sbjct: 121 EAMALYREMITKGIYPDTYTIPYVLKACAKFHALEEGQQIHAHSIKFNLNSNVYVLNTLM 180
Query: 869 DMYAKCGSLEMALQIFYGMFNRNILTWNXXXXXXXXXXXGCEALKHFEEMVTTGLRPNEV 690
+YA CG ++ +F R++++W EA++ + +M LRP+++
Sbjct: 181 RLYAVCGIIDYVRNLFDQSPERDLVSWTTIIQAFVKTGFAKEAIQAYFDMCRENLRPDKM 240
Query: 689 TFLVILTACCHSGLVGEGRRYFQMMNQQYNLSPRLEHYGCMVDLLCRAGLLDEAQEFIRN 510
T +V+L+AC G + G + + + +++ + +VD+ + G +D A++
Sbjct: 241 TLVVVLSACSRLGDLSLGTQIHENICNFHDIGSDVFVDNALVDVYMKCGDVDSARQLFNL 300
Query: 509 MPMRPDVLIWGAFLNACKPTGNFELSKNILDRLSELEAQDSGV 381
MP++ +V+ W + ++ G F+ + ++ + ++ + V
Sbjct: 301 MPVK-NVVSWNSMISGLVQQGQFKEALDVFHDMQKIGLKPDNV 342