BLASTX nr result
ID: Paeonia24_contig00031153
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00031153
(379 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAW22889.1| RNA polymerase II second largest subunit [Adiantu... 42 2e-06
gb|AAZ08460.1| RNA polymerase II second largest subunit [Eschsch... 42 3e-06
gb|AAZ08462.1| RNA polymerase II second largest subunit [Platanu... 42 3e-06
gb|AAY85217.1| RNA polymerase II second largest subunit [Muehlen... 42 3e-06
gb|AAS86824.1| RNA polymerase II second largest subunit, partial... 42 3e-06
gb|AAS86825.1| RNA polymerase II second largest subunit, partial... 42 3e-06
gb|AAY85232.1| RNA polymerase II second largest subunit [Sanguin... 42 3e-06
gb|AAY89343.1| RNA polymerase II second largest subunit [Antirrh... 41 8e-06
gb|AAS86827.1| RNA polymerase II second largest subunit, partial... 41 8e-06
>gb|AAW22889.1| RNA polymerase II second largest subunit [Adiantum tenerum]
Length = 469
Score = 42.0 bits (97), Expect(2) = 2e-06
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = -1
Query: 142 ESLQIYTNYGRCSLPLFIVEKQRI 71
+ L++YT+YGRCS PLFIVEKQR+
Sbjct: 95 KELRLYTDYGRCSRPLFIVEKQRL 118
Score = 35.0 bits (79), Expect(2) = 2e-06
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -2
Query: 186 VDVNTEVGVVQDIHLKACR 130
VDVNTEVGVV+DIHLK R
Sbjct: 80 VDVNTEVGVVRDIHLKELR 98
>gb|AAZ08460.1| RNA polymerase II second largest subunit [Eschscholzia californica]
Length = 951
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = -1
Query: 142 ESLQIYTNYGRCSLPLFIVEKQRI 71
+ L++YT+YGRCS PLFIVEKQR+
Sbjct: 508 KELRLYTDYGRCSRPLFIVEKQRL 531
Score = 34.7 bits (78), Expect(2) = 3e-06
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -2
Query: 186 VDVNTEVGVVQDIHLKACR 130
VDVNTEVGV++DIHLK R
Sbjct: 493 VDVNTEVGVIRDIHLKELR 511
>gb|AAZ08462.1| RNA polymerase II second largest subunit [Platanus orientalis]
Length = 923
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = -1
Query: 142 ESLQIYTNYGRCSLPLFIVEKQRI 71
+ L++YT+YGRCS PLFIVEKQR+
Sbjct: 480 KELRLYTDYGRCSRPLFIVEKQRL 503
Score = 34.7 bits (78), Expect(2) = 3e-06
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -2
Query: 186 VDVNTEVGVVQDIHLKACR 130
VDVNTEVGV++DIHLK R
Sbjct: 465 VDVNTEVGVIRDIHLKELR 483
>gb|AAY85217.1| RNA polymerase II second largest subunit [Muehlenbeckia platyclada]
Length = 875
Score = 41.6 bits (96), Expect(2) = 3e-06
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = -1
Query: 142 ESLQIYTNYGRCSLPLFIVEKQRI 71
+ L+IYT+YGRCS PLFIV+KQR+
Sbjct: 509 KELRIYTDYGRCSRPLFIVDKQRL 532
Score = 35.0 bits (79), Expect(2) = 3e-06
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -2
Query: 186 VDVNTEVGVVQDIHLKACR 130
VDVNTEVGVV+DIHLK R
Sbjct: 494 VDVNTEVGVVRDIHLKELR 512
>gb|AAS86824.1| RNA polymerase II second largest subunit, partial [Eschscholzia
californica]
Length = 559
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = -1
Query: 142 ESLQIYTNYGRCSLPLFIVEKQRI 71
+ L++YT+YGRCS PLFIVEKQR+
Sbjct: 116 KELRLYTDYGRCSRPLFIVEKQRL 139
Score = 34.7 bits (78), Expect(2) = 3e-06
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -2
Query: 186 VDVNTEVGVVQDIHLKACR 130
VDVNTEVGV++DIHLK R
Sbjct: 101 VDVNTEVGVIRDIHLKELR 119
>gb|AAS86825.1| RNA polymerase II second largest subunit, partial [Platanus
orientalis]
Length = 536
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = -1
Query: 142 ESLQIYTNYGRCSLPLFIVEKQRI 71
+ L++YT+YGRCS PLFIVEKQR+
Sbjct: 97 KELRLYTDYGRCSRPLFIVEKQRL 120
Score = 34.7 bits (78), Expect(2) = 3e-06
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -2
Query: 186 VDVNTEVGVVQDIHLKACR 130
VDVNTEVGV++DIHLK R
Sbjct: 82 VDVNTEVGVIRDIHLKELR 100
>gb|AAY85232.1| RNA polymerase II second largest subunit [Sanguinaria canadensis]
Length = 219
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = -1
Query: 142 ESLQIYTNYGRCSLPLFIVEKQRI 71
+ L++YT+YGRCS PLFIVEKQR+
Sbjct: 97 KELRLYTDYGRCSRPLFIVEKQRL 120
Score = 34.7 bits (78), Expect(2) = 3e-06
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -2
Query: 186 VDVNTEVGVVQDIHLKACR 130
VDVNTEVGV++DIHLK R
Sbjct: 82 VDVNTEVGVIRDIHLKELR 100
>gb|AAY89343.1| RNA polymerase II second largest subunit [Antirrhinum majus]
Length = 1198
Score = 40.8 bits (94), Expect(2) = 8e-06
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = -1
Query: 142 ESLQIYTNYGRCSLPLFIVEKQRI 71
+ L++YT+YGRCS PLFIV+KQR+
Sbjct: 621 KELRLYTDYGRCSRPLFIVDKQRL 644
Score = 34.3 bits (77), Expect(2) = 8e-06
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -2
Query: 186 VDVNTEVGVVQDIHLKACR 130
VDVNTEVG+++DIHLK R
Sbjct: 606 VDVNTEVGIIRDIHLKELR 624
>gb|AAS86827.1| RNA polymerase II second largest subunit, partial [Antirrhinum
majus]
Length = 573
Score = 40.8 bits (94), Expect(2) = 8e-06
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = -1
Query: 142 ESLQIYTNYGRCSLPLFIVEKQRI 71
+ L++YT+YGRCS PLFIV+KQR+
Sbjct: 97 KELRLYTDYGRCSRPLFIVDKQRL 120
Score = 34.3 bits (77), Expect(2) = 8e-06
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -2
Query: 186 VDVNTEVGVVQDIHLKACR 130
VDVNTEVG+++DIHLK R
Sbjct: 82 VDVNTEVGIIRDIHLKELR 100