BLASTX nr result
ID: Paeonia24_contig00029826
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00029826
(210 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004309770.1| PREDICTED: uncharacterized protein LOC101313... 79 7e-13
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 78 1e-12
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 77 2e-12
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 77 3e-12
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 77 3e-12
ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group] g... 76 4e-12
gb|AFB73911.1| polyprotein [Citrus sinensis] 75 7e-12
emb|CAN68884.1| hypothetical protein VITISV_039230 [Vitis vinifera] 75 9e-12
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 75 1e-11
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 75 1e-11
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 75 1e-11
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc... 74 2e-11
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 74 3e-11
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc... 73 4e-11
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 73 4e-11
gb|ABA97036.1| retrotransposon protein, putative, Ty1-copia subc... 72 1e-10
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 70 2e-10
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 70 2e-10
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 70 2e-10
gb|AFB73912.1| polyprotein [Citrus sinensis] 70 2e-10
>ref|XP_004309770.1| PREDICTED: uncharacterized protein LOC101313761 [Fragaria vesca
subsp. vesca]
Length = 1684
Score = 79.0 bits (193), Expect = 7e-13
Identities = 37/68 (54%), Positives = 51/68 (75%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIILQ 181
VG+IKIK+HDG VR ++NV H+P RNLIS+ LDS G+KIV G +KV+KGA ++++
Sbjct: 266 VGTIKIKVHDGSVRSLENVLHIPKFDRNLISLGTLDSVGHKIVGHDGNMKVLKGAIVVMK 325
Query: 182 CNKIGGLY 205
K+ GLY
Sbjct: 326 GKKVNGLY 333
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 77.8 bits (190), Expect = 1e-12
Identities = 33/59 (55%), Positives = 48/59 (81%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIIL 178
+GS++IK HDG+ R +K+VRH+PG+ RNLIS+S LD++GYK + GGVVKV KG+ + +
Sbjct: 334 IGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKYSSSGGVVKVSKGSLVYM 392
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 77.4 bits (189), Expect = 2e-12
Identities = 33/59 (55%), Positives = 47/59 (79%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIIL 178
+GS++IK HDG+ R +K+VRH+PG+ RNLIS+S LD++GYK GGVVKV KG+ + +
Sbjct: 334 IGSVQIKTHDGITRTLKDVRHIPGMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYM 392
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 76.6 bits (187), Expect = 3e-12
Identities = 33/59 (55%), Positives = 47/59 (79%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIIL 178
+GS++IK HDG+ R +K+VRH+PG+ RNLIS+S LD++GYK GGVVKV KG+ + +
Sbjct: 331 IGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYM 389
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 76.6 bits (187), Expect = 3e-12
Identities = 33/59 (55%), Positives = 47/59 (79%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIIL 178
+GS++IK HDG+ R +K+VRH+PG+ RNLIS+S LD++GYK GGVVKV KG+ + +
Sbjct: 334 IGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYM 392
>ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group]
gi|255676990|dbj|BAH93480.1| Os06g0316600 [Oryza sativa
Japonica Group]
Length = 759
Score = 76.3 bits (186), Expect = 4e-12
Identities = 33/59 (55%), Positives = 46/59 (77%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIIL 178
+GS++IK HDG+ R +K+ RH+PG+ RNLIS+S LDS+GYK GGVVKV KG+ + +
Sbjct: 263 IGSVQIKTHDGMTRTLKDARHIPGMARNLISLSTLDSEGYKYSGSGGVVKVSKGSLVYM 321
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 75.5 bits (184), Expect = 7e-12
Identities = 33/69 (47%), Positives = 50/69 (72%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIILQ 181
+G+IKIK+ DG +R + VRHV GLK+NL+S+ +DS GYK E G++K++KGA ++++
Sbjct: 333 IGTIKIKMFDGTIRTIGEVRHVNGLKKNLLSLGQMDSHGYKTHVENGIMKIVKGALVLMK 392
Query: 182 CNKIGGLYF 208
KIG F
Sbjct: 393 VEKIGANLF 401
>emb|CAN68884.1| hypothetical protein VITISV_039230 [Vitis vinifera]
Length = 220
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/68 (48%), Positives = 50/68 (73%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIILQ 181
+ +I+IK++DG +R + +VRHVP LK+NLIS+ LDS G EGGV+++ KGA ++++
Sbjct: 110 IDTIRIKMYDGFIRTLTDVRHVPKLKKNLISLGTLDSNGCTYKAEGGVLRISKGALVVMK 169
Query: 182 CNKIGGLY 205
KI GLY
Sbjct: 170 GKKINGLY 177
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/64 (53%), Positives = 49/64 (76%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIILQ 181
VG+I++K+HDG VR ++ VRHV GLK+NL+SV LD G KI TE G++KV+KG ++++
Sbjct: 332 VGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMK 391
Query: 182 CNKI 193
KI
Sbjct: 392 AEKI 395
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/64 (53%), Positives = 49/64 (76%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIILQ 181
VG+I++K+HDG VR ++ VRHV GLK+NL+SV LD G KI TE G++KV+KG ++++
Sbjct: 332 VGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMK 391
Query: 182 CNKI 193
KI
Sbjct: 392 AEKI 395
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/64 (53%), Positives = 49/64 (76%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIILQ 181
VG+I++K+HDG VR ++ VRHV GLK+NL+SV LD G KI TE G++KV+KG ++++
Sbjct: 332 VGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMK 391
Query: 182 CNKI 193
KI
Sbjct: 392 AEKI 395
>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIIL 178
+ S++IK HDG+ R +K+VRH+PG+ RNLIS+S LD++GYK GGVVKV KG+ + +
Sbjct: 274 ISSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYM 332
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIIL 178
+GS++IK HDG+ R +K+VRH+P + RNLIS+S LD++GYK GGVVKV KG+ + +
Sbjct: 229 IGSVQIKTHDGMTRTLKDVRHIPRMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYM 287
>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1131
Score = 73.2 bits (178), Expect = 4e-11
Identities = 32/59 (54%), Positives = 47/59 (79%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIIL 178
+GS++IK HDG+ R +K+VR++PG+ RNLIS+S LD++GYK GGVVKV KG+ + +
Sbjct: 284 IGSVQIKTHDGMTRTLKDVRYIPGMARNLISLSTLDAEGYKYSGLGGVVKVSKGSLVYM 342
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 73.2 bits (178), Expect = 4e-11
Identities = 33/64 (51%), Positives = 49/64 (76%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIILQ 181
VG+I++K+HDG VR ++ VRHV GLK+NL+SV LD G KI +E G++KV+KG ++++
Sbjct: 332 VGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHSESGILKVVKGNLVVMK 391
Query: 182 CNKI 193
KI
Sbjct: 392 AEKI 395
>gb|ABA97036.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 966
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/59 (50%), Positives = 46/59 (77%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIIL 178
+GS++IK HDG+ R +K++RH+P + RNLIS+S D++GYK + GGVVKV KG+ + +
Sbjct: 265 IGSVQIKTHDGMTRTLKDMRHIPRMVRNLISLSTFDAEGYKYSSSGGVVKVSKGSLVYM 323
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/60 (51%), Positives = 46/60 (76%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIILQ 181
+GS++IK DG+ R +KNVR++PG+ RNLIS+S LD++GYK GV+KV KG+ + L+
Sbjct: 332 IGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLK 391
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/60 (51%), Positives = 46/60 (76%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIILQ 181
+GS++IK DG+ R +KNVR++PG+ RNLIS+S LD++GYK GV+KV KG+ + L+
Sbjct: 332 IGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLK 391
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/60 (51%), Positives = 46/60 (76%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIILQ 181
+GS++IK DG+ R +KNVR++PG+ RNLIS+S LD++GYK GV+KV KG+ + L+
Sbjct: 332 IGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLK 391
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/64 (46%), Positives = 48/64 (75%)
Frame = +2
Query: 2 VGSIKIKLHDGVVRVMKNVRHVPGLKRNLISVSVLDSKGYKIVTEGGVVKVMKGAHIILQ 181
+G+IKIK+ DG +R ++ VRHV GLK+NL+S+ +DS G K E G++K++KGA ++++
Sbjct: 333 IGTIKIKMFDGTIRTIEEVRHVNGLKKNLLSLGQMDSHGCKTHVENGIMKIVKGALVLMK 392
Query: 182 CNKI 193
KI
Sbjct: 393 AEKI 396