BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00029761
         (1304 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi...   445   e-122
emb|CBI36294.3| unnamed protein product [Vitis vinifera]              445   e-122
ref|XP_002305285.2| pentatricopeptide repeat-containing family p...   429   e-117
ref|XP_007215907.1| hypothetical protein PRUPE_ppa004160mg [Prun...   425   e-116
ref|XP_004305328.1| PREDICTED: pentatricopeptide repeat-containi...   421   e-115
ref|XP_006465352.1| PREDICTED: pentatricopeptide repeat-containi...   414   e-113
ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containi...   410   e-112
ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containi...   410   e-112
ref|XP_006427239.1| hypothetical protein CICLE_v100269871mg, par...   409   e-111
gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis]     409   e-111
ref|XP_007023868.1| Pentatricopeptide repeat (PPR) superfamily p...   407   e-111
ref|XP_002530894.1| pentatricopeptide repeat-containing protein,...   406   e-111
ref|XP_004503476.1| PREDICTED: pentatricopeptide repeat-containi...   398   e-108
ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containi...   390   e-106
ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containi...   387   e-105
ref|XP_003630734.1| Pentatricopeptide repeat-containing protein ...   387   e-105
gb|EYU21622.1| hypothetical protein MIMGU_mgv1a019624mg, partial...   386   e-104
ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containi...   384   e-104
ref|NP_175673.1| pentatricopeptide repeat-containing protein [Ar...   382   e-103
ref|XP_006392896.1| hypothetical protein EUTSA_v10011389mg [Eutr...   380   e-103

>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Vitis vinifera]
          Length = 624

 Score =  445 bits (1145), Expect = e-122
 Identities = 211/292 (72%), Positives = 248/292 (84%), Gaps = 1/292 (0%)
 Frame = +3

Query: 3    DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
            D+GDS+EARKLFEEM ERGC+VDV+AYNS LEALCKGGN DEAYKLFREMG+ G+ PDA 
Sbjct: 231  DVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDAC 290

Query: 183  TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
            +Y+IFIRA CE NDIH AF++LDRM+ YNLVP+V TYNC++KKLCK+EKV+EAY+LLDEM
Sbjct: 291  SYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEM 350

Query: 363  LERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRF 542
            +ERGV+PD WSYN I  FHCDHCEV ++L+L+SRMEK+ CMPD+HTYNMVL+ML+R GRF
Sbjct: 351  IERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRF 410

Query: 543  DSVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVEC 719
            D V+ VW  M E+G YP+ STYAVMVHGF  KKGKLEEACKYFEMM+D+GIPPY  TVE 
Sbjct: 411  DRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVEL 470

Query: 720  LRNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRGVKACGRQEMKKQTL 875
            LRNR+IG GF +QI VLA KMERSTSC IQE +  MRG KA GR   ++Q L
Sbjct: 471  LRNRVIGLGFSEQIDVLAGKMERSTSCVIQELSSVMRGEKASGRLRSEEQNL 522



 Score =  109 bits (272), Expect = 3e-21
 Identities = 67/247 (27%), Positives = 122/247 (49%)
 Frame = +3

Query: 21  EARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGTYAIFI 200
           +A + F +M + G    V   +  L  LCK  +  +A + F ++  + V P+A TY+I +
Sbjct: 168 DAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVE-VMPNAKTYSILM 226

Query: 201 RAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVN 380
           R   +  D   A KL + M+      DV  YN +++ LCK   V+EAY+L  EM   G+ 
Sbjct: 227 RGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLA 286

Query: 381 PDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSVSAV 560
           PDA SY+  +  +C+  ++  + ++L RM +   +P+  TYN +++ L ++ + D    +
Sbjct: 287 PDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQL 346

Query: 561 WESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNRLIG 740
            + M E+GV P + +Y  +        ++ +A +    M  E   P   T   +   L+ 
Sbjct: 347 LDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLR 406

Query: 741 SGFVDQI 761
            G  D++
Sbjct: 407 VGRFDRV 413



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 1/203 (0%)
 Frame = +3

Query: 192 IFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLER 371
           +  RA C AN    A +   +M  + +   V   + ++  LCK + V++A E  D++   
Sbjct: 155 LIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVE 214

Query: 372 GVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSV 551
            V P+A +Y+ ++    D  + +E+ KL   M +  C  D   YN +L+ L + G  D  
Sbjct: 215 -VMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEA 273

Query: 552 SAVWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNR 731
             ++  MG  G+ P   +Y++ +  + +   +  A +  + M    + P   T  C+  +
Sbjct: 274 YKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKK 333

Query: 732 LIGSGFVDQIHVLADKM-ERSTS 797
           L  S  VD+ + L D+M ER  S
Sbjct: 334 LCKSEKVDEAYQLLDEMIERGVS 356


>emb|CBI36294.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  445 bits (1145), Expect = e-122
 Identities = 211/292 (72%), Positives = 248/292 (84%), Gaps = 1/292 (0%)
 Frame = +3

Query: 3    DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
            D+GDS+EARKLFEEM ERGC+VDV+AYNS LEALCKGGN DEAYKLFREMG+ G+ PDA 
Sbjct: 204  DVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDAC 263

Query: 183  TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
            +Y+IFIRA CE NDIH AF++LDRM+ YNLVP+V TYNC++KKLCK+EKV+EAY+LLDEM
Sbjct: 264  SYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEM 323

Query: 363  LERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRF 542
            +ERGV+PD WSYN I  FHCDHCEV ++L+L+SRMEK+ CMPD+HTYNMVL+ML+R GRF
Sbjct: 324  IERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRF 383

Query: 543  DSVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVEC 719
            D V+ VW  M E+G YP+ STYAVMVHGF  KKGKLEEACKYFEMM+D+GIPPY  TVE 
Sbjct: 384  DRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVEL 443

Query: 720  LRNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRGVKACGRQEMKKQTL 875
            LRNR+IG GF +QI VLA KMERSTSC IQE +  MRG KA GR   ++Q L
Sbjct: 444  LRNRVIGLGFSEQIDVLAGKMERSTSCVIQELSSVMRGEKASGRLRSEEQNL 495



 Score =  109 bits (272), Expect = 3e-21
 Identities = 67/247 (27%), Positives = 122/247 (49%)
 Frame = +3

Query: 21  EARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGTYAIFI 200
           +A + F +M + G    V   +  L  LCK  +  +A + F ++  + V P+A TY+I +
Sbjct: 141 DAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVE-VMPNAKTYSILM 199

Query: 201 RAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVN 380
           R   +  D   A KL + M+      DV  YN +++ LCK   V+EAY+L  EM   G+ 
Sbjct: 200 RGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLA 259

Query: 381 PDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSVSAV 560
           PDA SY+  +  +C+  ++  + ++L RM +   +P+  TYN +++ L ++ + D    +
Sbjct: 260 PDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQL 319

Query: 561 WESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNRLIG 740
            + M E+GV P + +Y  +        ++ +A +    M  E   P   T   +   L+ 
Sbjct: 320 LDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLR 379

Query: 741 SGFVDQI 761
            G  D++
Sbjct: 380 VGRFDRV 386



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 1/203 (0%)
 Frame = +3

Query: 192 IFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLER 371
           +  RA C AN    A +   +M  + +   V   + ++  LCK + V++A E  D++   
Sbjct: 128 LIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVE 187

Query: 372 GVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSV 551
            V P+A +Y+ ++    D  + +E+ KL   M +  C  D   YN +L+ L + G  D  
Sbjct: 188 -VMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEA 246

Query: 552 SAVWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNR 731
             ++  MG  G+ P   +Y++ +  + +   +  A +  + M    + P   T  C+  +
Sbjct: 247 YKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKK 306

Query: 732 LIGSGFVDQIHVLADKM-ERSTS 797
           L  S  VD+ + L D+M ER  S
Sbjct: 307 LCKSEKVDEAYQLLDEMIERGVS 329


>ref|XP_002305285.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550340729|gb|EEE85796.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 523

 Score =  429 bits (1102), Expect = e-117
 Identities = 202/294 (68%), Positives = 246/294 (83%), Gaps = 1/294 (0%)
 Frame = +3

Query: 3    DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
            DIG++ EARK+F+EML RGC++DVLAYNS LEALCKGGN DEAYK+FRE+G+ GVEPDA 
Sbjct: 229  DIGEAVEARKVFDEMLGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDAC 288

Query: 183  TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
            +YAIFIRA CEAN+IH  F +LDRMK Y+LVP+V TYNC+IKKLCKN KVE+AY+LL EM
Sbjct: 289  SYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEM 348

Query: 363  LERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRF 542
            +ERGV+PDAWSYNTIL +HC+H EV  + KL+S M KD C+PD+H+YNM+L++L+R GRF
Sbjct: 349  MERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRF 408

Query: 543  DSVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVEC 719
            D  + +WESMGE+G YPSVSTY+VM+HG   KKGKLEEAC+YFE M+DEGIPPY ST+E 
Sbjct: 409  DRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEM 468

Query: 720  LRNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRGVKACGRQEMKKQTLKA 881
            LRNRLIG G +D I +LA KMER TSCSIQE AK MRG KAC R   ++  L++
Sbjct: 469  LRNRLIGFGLLDHIEILACKMERGTSCSIQELAKEMRGNKACVRSRNEETELES 522



 Score =  107 bits (268), Expect = 9e-21
 Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 1/274 (0%)
 Frame = +3

Query: 18  NEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGTYAIF 197
           ++A + F+ M E G    V   +  L  LCK  +   A + F  +  K  E  A TY+I 
Sbjct: 165 SDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHK-FEAKAKTYSIL 223

Query: 198 IRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGV 377
           +R   +  +   A K+ D M G     DV  YN +++ LCK   V+EAY++  E+   GV
Sbjct: 224 VRGWGDIGEAVEARKVFDEMLGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGV 283

Query: 378 NPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSVSA 557
            PDA SY   +  +C+   +     +L RM++   +P+  TYN +++ L + G+ +    
Sbjct: 284 EPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQ 343

Query: 558 VWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNRLI 737
           +   M E+GV P   +Y  ++    +  ++  A K   +MV +   P   +   L   L+
Sbjct: 344 LLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLV 403

Query: 738 GSGFVDQIHVLADKM-ERSTSCSIQEHAKTMRGV 836
             G  D+   + + M ER    S+  ++  + G+
Sbjct: 404 RVGRFDRATEIWESMGERGFYPSVSTYSVMIHGL 437



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 1/203 (0%)
 Frame = +3

Query: 192 IFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLER 371
           +  R+   AN    A +  DRM  + L P V   + ++  LCK + V+ A +  D +  +
Sbjct: 153 LVFRSYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHK 212

Query: 372 GVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSV 551
                A +Y+ ++    D  E  E+ K+   M    C  D   YN +L+ L + G  D  
Sbjct: 213 -FEAKAKTYSILVRGWGDIGEAVEARKVFDEMLGRGCALDVLAYNSLLEALCKGGNVDEA 271

Query: 552 SAVWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNR 731
             ++  +G  GV P   +YA+ +  + +   +       + M    + P   T  C+  +
Sbjct: 272 YKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKK 331

Query: 732 LIGSGFV-DQIHVLADKMERSTS 797
           L  +G V D   +L + MER  S
Sbjct: 332 LCKNGKVEDAYQLLHEMMERGVS 354


>ref|XP_007215907.1| hypothetical protein PRUPE_ppa004160mg [Prunus persica]
            gi|462412057|gb|EMJ17106.1| hypothetical protein
            PRUPE_ppa004160mg [Prunus persica]
          Length = 526

 Score =  425 bits (1092), Expect = e-116
 Identities = 202/280 (72%), Positives = 235/280 (83%), Gaps = 1/280 (0%)
 Frame = +3

Query: 3    DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
            DIGDS+EARKLF+EM ERGC VDV AYNS+LEALCKGG  DEAYK+FR MG+ G +PDA 
Sbjct: 231  DIGDSDEARKLFDEMTERGCLVDVPAYNSYLEALCKGGKVDEAYKIFRGMGSNGTDPDAC 290

Query: 183  TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
            TY+IFIRA CEANDIH  F++LDRMK YNL+P+V++YNC+IKKLCKN+KVEEAYELLDEM
Sbjct: 291  TYSIFIRAYCEANDIHSVFRVLDRMKRYNLLPNVYSYNCIIKKLCKNDKVEEAYELLDEM 350

Query: 363  LERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRF 542
            +ERGV PDAWSYN I   HCDHCEV  +L+LLSRM+KD C PD+HTYNMVL++LIR GRF
Sbjct: 351  IERGVMPDAWSYNAIQAHHCDHCEVNRALRLLSRMKKDNCKPDRHTYNMVLKLLIRIGRF 410

Query: 543  DSVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVEC 719
            D  + VWESMGE+G YPSVSTY+VM+HG   KK KLEEACKYFE+M+DEGIPPY STVE 
Sbjct: 411  DRATEVWESMGERGFYPSVSTYSVMIHGLCKKKHKLEEACKYFEIMIDEGIPPYFSTVEM 470

Query: 720  LRNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRGVK 839
            L+NRL G G ++   +LA KME+ST CSIQE A  MRG K
Sbjct: 471  LKNRLRGLGLLEHTEILASKMEQSTCCSIQEMANLMRGNK 510


>ref|XP_004305328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 734

 Score =  421 bits (1081), Expect = e-115
 Identities = 200/274 (72%), Positives = 232/274 (84%), Gaps = 1/274 (0%)
 Frame = +3

Query: 3    DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
            DI DS+ ARKLF+EM E+GC VDV AYNS+LEALCKGGN DEAYK+FREMG+KGVEPDAG
Sbjct: 369  DICDSDNARKLFDEMTEKGCLVDVPAYNSYLEALCKGGNVDEAYKIFREMGSKGVEPDAG 428

Query: 183  TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
            TY+IFIRA CEANDIH  F +LDRMK YNL+ +V TYNCVIKKLCKNE+VEEAY+LLDEM
Sbjct: 429  TYSIFIRAYCEANDIHSVFSVLDRMKRYNLLANVFTYNCVIKKLCKNERVEEAYQLLDEM 488

Query: 363  LERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRF 542
            +E GV PD WSYN I  +HC+H EV ++L+LLSRMEKD CMPD HTYNMVL++LIR GRF
Sbjct: 489  IEMGVKPDEWSYNAIQAYHCEHGEVNQALRLLSRMEKDSCMPDHHTYNMVLKLLIRIGRF 548

Query: 543  DSVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVEC 719
            D  + VWE MG++G YPSVSTY+VM+HG   KK KLEEACKYFE+M+DEGIPPY STVE 
Sbjct: 549  DRATDVWERMGKRGFYPSVSTYSVMIHGLCKKKHKLEEACKYFEIMIDEGIPPYSSTVEM 608

Query: 720  LRNRLIGSGFVDQIHVLADKMERSTSCSIQEHAK 821
            LRNRL+G G +D I +LA KME+S+SCS QE AK
Sbjct: 609  LRNRLLGLGLLDDIEILARKMEQSSSCSTQEFAK 642



 Score =  103 bits (258), Expect = 1e-19
 Identities = 73/291 (25%), Positives = 137/291 (47%), Gaps = 1/291 (0%)
 Frame = +3

Query: 21   EARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGTYAIFI 200
            +A + +  M+E G    +   +  L  LCK  +   A + F ++ + G E  A TY+I +
Sbjct: 306  DAIRAYSRMVEFGIKPSIHDLDHLLYTLCKRKHVKHAQEFFDKVKS-GFELGAKTYSILM 364

Query: 201  RAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVN 380
            R   +  D   A KL D M     + DV  YN  ++ LCK   V+EAY++  EM  +GV 
Sbjct: 365  RGWGDICDSDNARKLFDEMTEKGCLVDVPAYNSYLEALCKGGNVDEAYKIFREMGSKGVE 424

Query: 381  PDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSVSAV 560
            PDA +Y+  +  +C+  ++     +L RM++   + +  TYN V++ L +  R +    +
Sbjct: 425  PDAGTYSIFIRAYCEANDIHSVFSVLDRMKRYNLLANVFTYNCVIKKLCKNERVEEAYQL 484

Query: 561  WESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNRLIG 740
             + M E GV P   +Y  +     + G++ +A +    M  +   P   T   +   LI 
Sbjct: 485  LDEMIEMGVKPDEWSYNAIQAYHCEHGEVNQALRLLSRMEKDSCMPDHHTYNMVLKLLIR 544

Query: 741  SGFVDQIHVLADKM-ERSTSCSIQEHAKTMRGVKACGRQEMKKQTLKALKL 890
             G  D+   + ++M +R    S+  ++  + G+  C ++   ++  K  ++
Sbjct: 545  IGRFDRATDVWERMGKRGFYPSVSTYSVMIHGL--CKKKHKLEEACKYFEI 593


>ref|XP_006465352.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Citrus sinensis]
          Length = 531

 Score =  414 bits (1064), Expect = e-113
 Identities = 196/278 (70%), Positives = 232/278 (83%), Gaps = 1/278 (0%)
 Frame = +3

Query: 3    DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
            D+G+ +EARKLF+EMLER C VD+LA+NS LEA+CK GN DEA+ + REM + G EPDA 
Sbjct: 237  DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 296

Query: 183  TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
            +Y+IFI A CEANDIH  F++LD MK YNLVP+V TYNC+IKKLCKNEKVEEAY+LLDEM
Sbjct: 297  SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIKKLCKNEKVEEAYQLLDEM 356

Query: 363  LERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRF 542
            +ERG NPD WSYN IL +HCDH EV  +L+L++RM K+  MPD+HTYNMVL++L+R GRF
Sbjct: 357  IERGANPDEWSYNAILAYHCDHAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 416

Query: 543  DSVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVEC 719
            D  + VWESM ++G YPSVSTY+VMVHG   KKGKLEEACKYFEMMVDEGIPPY STVE 
Sbjct: 417  DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 476

Query: 720  LRNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRG 833
            LRNRL+G GF+D I +LADKMERSTSC+IQE A  MRG
Sbjct: 477  LRNRLVGLGFLDVIEILADKMERSTSCTIQELANAMRG 514


>ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  410 bits (1055), Expect = e-112
 Identities = 190/288 (65%), Positives = 235/288 (81%), Gaps = 1/288 (0%)
 Frame = +3

Query: 6    IGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGT 185
            +GDSN A+K+F+EM ERGC +DVLAYNS LEALCKGG  DEAYK+F EM + GV+PDA T
Sbjct: 233  VGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADT 292

Query: 186  YAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEML 365
            Y+IFIR++C+ ND+H  +++L+R K  NL+P+V TYNCVIKKLCK++ VEEAY++LDEM+
Sbjct: 293  YSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMI 352

Query: 366  ERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFD 545
            ERGV PD WSYN I  +HCDH EV  +L L+ RM++DKC+PD+HTYNMVL++L+R GRFD
Sbjct: 353  ERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFD 412

Query: 546  SVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVECL 722
              + VWESMG++G YPSVSTYAVM+HGF  KK KLEEACKYFEMM+DEGIPPY +TVE L
Sbjct: 413  RANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELL 472

Query: 723  RNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRGVKACGRQEMKK 866
            R+RL+G GF DQ+ +L DKM+RSTSCSIQE A  M G K    Q M K
Sbjct: 473  RDRLLGIGFKDQVAILGDKMKRSTSCSIQELANLMSGGKRREAQSMLK 520


>ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  410 bits (1055), Expect = e-112
 Identities = 190/288 (65%), Positives = 235/288 (81%), Gaps = 1/288 (0%)
 Frame = +3

Query: 6    IGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGT 185
            +GDSN A+K+F+EM ERGC +DVLAYNS LEALCKGG  DEAYK+F EM + GV+PDA T
Sbjct: 233  VGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADT 292

Query: 186  YAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEML 365
            Y+IFIR++C+ ND+H  +++L+R K  NL+P+V TYNCVIKKLCK++ VEEAY++LDEM+
Sbjct: 293  YSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMI 352

Query: 366  ERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFD 545
            ERGV PD WSYN I  +HCDH EV  +L L+ RM++DKC+PD+HTYNMVL++L+R GRFD
Sbjct: 353  ERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFD 412

Query: 546  SVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVECL 722
              + VWESMG++G YPSVSTYAVM+HGF  KK KLEEACKYFEMM+DEGIPPY +TVE L
Sbjct: 413  RANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELL 472

Query: 723  RNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRGVKACGRQEMKK 866
            R+RL+G GF DQ+ +L DKM+RSTSCSIQE A  M G K    Q M K
Sbjct: 473  RDRLLGIGFKDQVAILGDKMKRSTSCSIQELANLMSGGKRREAQSMLK 520


>ref|XP_006427239.1| hypothetical protein CICLE_v100269871mg, partial [Citrus
           clementina] gi|557529229|gb|ESR40479.1| hypothetical
           protein CICLE_v100269871mg, partial [Citrus clementina]
          Length = 436

 Score =  409 bits (1052), Expect = e-111
 Identities = 194/278 (69%), Positives = 231/278 (83%), Gaps = 1/278 (0%)
 Frame = +3

Query: 3   DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
           D+G+ +EARKLF+EMLER C VD+LA+NS LEA+CK GN DEA+ + REM + G EPDA 
Sbjct: 142 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 201

Query: 183 TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
           +Y+IFI A CEANDIH  F++LD MK YNLVP+V TYNC+I+KLCKNEKVEEAY+LLDEM
Sbjct: 202 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 261

Query: 363 LERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRF 542
           +ERG NPD WSYN IL +HCD  EV  +L+L++RM K+  MPD+HTYNMVL++L+R GRF
Sbjct: 262 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 321

Query: 543 DSVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVEC 719
           D  + VWESM ++G YPSVSTY+VMVHG   KKGKLEEACKYFEMMVDEGIPPY STVE 
Sbjct: 322 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 381

Query: 720 LRNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRG 833
           LRNRL+G GF+D I +LADKMERSTSC+IQE A  MRG
Sbjct: 382 LRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMRG 419



 Score =  102 bits (255), Expect = 3e-19
 Identities = 61/257 (23%), Positives = 120/257 (46%)
 Frame = +3

Query: 18  NEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGTYAIF 197
           N+A + F  M+E G    +   +  L ALCK  +   A++ F +       P   TY+I 
Sbjct: 78  NDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSIL 136

Query: 198 IRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGV 377
           +R   +  ++  A KL D M       D+  +N +++ +CK   ++EA+ +L EM   G 
Sbjct: 137 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 196

Query: 378 NPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSVSA 557
            PDA+SY+  +   C+  ++    ++L  M++   +P+  TYN +++ L +  + +    
Sbjct: 197 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 256

Query: 558 VWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNRLI 737
           + + M E+G  P   +Y  ++     + ++  A +    M  E + P   T   +   L+
Sbjct: 257 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 316

Query: 738 GSGFVDQIHVLADKMER 788
             G  D+   + + ME+
Sbjct: 317 RVGRFDRATEVWESMEK 333


>gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis]
          Length = 529

 Score =  409 bits (1051), Expect = e-111
 Identities = 194/294 (65%), Positives = 240/294 (81%), Gaps = 1/294 (0%)
 Frame = +3

Query: 3    DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
            D+GD++ AR+LF+EML+RGC +DVLAYNS+LEALCKGG+ DEAY++FR M  KGV PDA 
Sbjct: 236  DLGDASHARELFDEMLQRGCFLDVLAYNSYLEALCKGGSADEAYEIFRGMKEKGVSPDAC 295

Query: 183  TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
            TY++FIR  CEANDIH  F++LDRM+ Y+L+P+V TYN +IKKLCKNEKV+EAY+LL+EM
Sbjct: 296  TYSVFIRTYCEANDIHSVFRVLDRMRRYDLLPNVFTYNLIIKKLCKNEKVDEAYQLLEEM 355

Query: 363  LERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRF 542
            +E GV PD+WSYN IL FHCDHCEV  +L+LLSRMEKD C PD+HTYNMVL++LI  GRF
Sbjct: 356  IENGVRPDSWSYNAILAFHCDHCEVHRALRLLSRMEKD-CKPDRHTYNMVLKLLIGIGRF 414

Query: 543  DSVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVEC 719
            D ++ VWE+M  KG YPSVSTYAVM+HG   KKGKLEEACKYFE M+DEGIPPY +TVE 
Sbjct: 415  DRMTEVWENMAVKGFYPSVSTYAVMIHGLCKKKGKLEEACKYFETMIDEGIPPYSTTVEM 474

Query: 720  LRNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRGVKACGRQEMKKQTLKA 881
            LRNRL+G G ++ I ++A KMERSTSC IQE A  MRG +A      ++  L++
Sbjct: 475  LRNRLLGLGLLEHIDIIARKMERSTSCLIQEFANLMRGGRAFKTSRREESDLES 528



 Score =  109 bits (272), Expect = 3e-21
 Identities = 71/254 (27%), Positives = 122/254 (48%)
 Frame = +3

Query: 21  EARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGTYAIFI 200
           +A + F  M+E G    V   +  L ALCK  +   A++ F ++   G EP   T++I I
Sbjct: 173 DAIRAFNRMVEFGVKPCVHDLDQLLYALCKRKHVKHAHEFFDKVKG-GFEPSVKTFSILI 231

Query: 201 RAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVN 380
           R   +  D   A +L D M       DV  YN  ++ LCK    +EAYE+   M E+GV+
Sbjct: 232 RGWGDLGDASHARELFDEMLQRGCFLDVLAYNSYLEALCKGGSADEAYEIFRGMKEKGVS 291

Query: 381 PDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSVSAV 560
           PDA +Y+  +  +C+  ++    ++L RM +   +P+  TYN++++ L +  + D    +
Sbjct: 292 PDACTYSVFIRTYCEANDIHSVFRVLDRMRRYDLLPNVFTYNLIIKKLCKNEKVDEAYQL 351

Query: 561 WESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNRLIG 740
            E M E GV P   +Y  ++       ++  A +    M ++   P   T   +   LIG
Sbjct: 352 LEEMIENGVRPDSWSYNAILAFHCDHCEVHRALRLLSRM-EKDCKPDRHTYNMVLKLLIG 410

Query: 741 SGFVDQIHVLADKM 782
            G  D++  + + M
Sbjct: 411 IGRFDRMTEVWENM 424



 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 49/197 (24%), Positives = 91/197 (46%)
 Frame = +3

Query: 192 IFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLER 371
           I  RA C AN    A +  +RM  + + P VH  + ++  LCK + V+ A+E  D+ ++ 
Sbjct: 160 IVFRAYCRANLPRDAIRAFNRMVEFGVKPCVHDLDQLLYALCKRKHVKHAHEFFDK-VKG 218

Query: 372 GVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSV 551
           G  P   +++ ++    D  + + + +L   M +  C  D   YN  L+ L + G  D  
Sbjct: 219 GFEPSVKTFSILIRGWGDLGDASHARELFDEMLQRGCFLDVLAYNSYLEALCKGGSADEA 278

Query: 552 SAVWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNR 731
             ++  M EKGV P   TY+V +  + +   +    +  + M    + P   T   +  +
Sbjct: 279 YEIFRGMKEKGVSPDACTYSVFIRTYCEANDIHSVFRVLDRMRRYDLLPNVFTYNLIIKK 338

Query: 732 LIGSGFVDQIHVLADKM 782
           L  +  VD+ + L ++M
Sbjct: 339 LCKNEKVDEAYQLLEEM 355


>ref|XP_007023868.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
            gi|508779234|gb|EOY26490.1| Pentatricopeptide repeat
            (PPR) superfamily protein [Theobroma cacao]
          Length = 520

 Score =  407 bits (1047), Expect = e-111
 Identities = 188/294 (63%), Positives = 240/294 (81%), Gaps = 1/294 (0%)
 Frame = +3

Query: 3    DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
            DIG++ +ARK+F+EM++RGCS+DVLAYN  LEALCK GN DEAYK+F  MG+  +E DA 
Sbjct: 226  DIGEACQARKVFDEMVQRGCSIDVLAYNCLLEALCKSGNVDEAYKMFGAMGSSRIELDAC 285

Query: 183  TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
            +Y++FIRA CEANDIH AF++LDRM+ YNLVP++ TYNC+I+KLC N+KV+EAY+LL EM
Sbjct: 286  SYSVFIRAYCEANDIHAAFRVLDRMRRYNLVPNLFTYNCIIRKLCNNDKVDEAYQLLTEM 345

Query: 363  LERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRF 542
            +ERG++PD WSYN IL +HC+H EV  +L L+SRMEK++C PD+HTYNM L++LIR GRF
Sbjct: 346  IERGISPDEWSYNAILAYHCEHSEVNRALNLISRMEKNECFPDRHTYNMALKLLIRIGRF 405

Query: 543  DSVSAVWESMGEKGVYPSVSTYAVMVHGFTKK-GKLEEACKYFEMMVDEGIPPYPSTVEC 719
            D  + +WESM  +G YPSVSTYAVM+HG  KK GKLEEAC+YFE+M+DEGIPPY STVE 
Sbjct: 406  DRATELWESMANRGFYPSVSTYAVMIHGLCKKRGKLEEACRYFEIMIDEGIPPYSSTVEL 465

Query: 720  LRNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRGVKACGRQEMKKQTLKA 881
            LRNRL+G GF+D I +LA+KM RS+SCSIQE A  MRG  A  R   ++  L++
Sbjct: 466  LRNRLLGLGFLDNIEILANKMARSSSCSIQELANAMRGKTAYRRTRSEETELES 519



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 1/214 (0%)
 Frame = +3

Query: 159 KGVEPDAGTYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEE 338
           K  E +   + +  RA C AN    A +  DRM  + + P +H  + ++  LCK + V++
Sbjct: 139 KQFEINPEIFWVVFRAYCRANLPGDAIRAFDRMVEFGIRPSIHDVDQLLFVLCKRKHVKQ 198

Query: 339 AYELLDEMLERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQ 518
           A    D  ++    P A SY+ ++    D  E  ++ K+   M +  C  D   YN +L+
Sbjct: 199 AQGFFDR-VKHEFEPSAKSYSILVRGWGDIGEACQARKVFDEMVQRGCSIDVLAYNCLLE 257

Query: 519 MLIRAGRFDSVSAVWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPP 698
            L ++G  D    ++ +MG   +     +Y+V +  + +   +  A +  + M    + P
Sbjct: 258 ALCKSGNVDEAYKMFGAMGSSRIELDACSYSVFIRAYCEANDIHAAFRVLDRMRRYNLVP 317

Query: 699 YPSTVECLRNRLIGSGFVDQIH-VLADKMERSTS 797
              T  C+  +L  +  VD+ + +L + +ER  S
Sbjct: 318 NLFTYNCIIRKLCNNDKVDEAYQLLTEMIERGIS 351


>ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529547|gb|EEF31500.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  406 bits (1044), Expect = e-111
 Identities = 194/280 (69%), Positives = 231/280 (82%), Gaps = 1/280 (0%)
 Frame = +3

Query: 3    DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
            DIG+S  A K+F+EM E+ C+VDVLAYNS LEA CKGG   EAYK+FREMG+ G++PDA 
Sbjct: 225  DIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDAC 284

Query: 183  TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
            T++IFIRA CEANDIHLA+++LD MK Y+LVP+V TYNC+IKKLCK EKVEEAY+LL+E+
Sbjct: 285  TFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEI 344

Query: 363  LERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRF 542
            +ER   PDAWSYN IL +HC+H EV  + +L+SRM KD C+PD+H+YNM+L++LIR GRF
Sbjct: 345  IERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRF 404

Query: 543  DSVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVEC 719
            D    VWESMGEKG YPSVSTY+VMVHG   KKGKLEEACKYFEMM+DEGIPPY STVE 
Sbjct: 405  DRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEI 464

Query: 720  LRNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRGVK 839
            LRNRLIG G +D I +LA KME ST+CSIQE A  MRG K
Sbjct: 465  LRNRLIGLGLLDYIEILAGKMEHSTACSIQELAIAMRGGK 504



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 1/201 (0%)
 Frame = +3

Query: 192 IFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLER 371
           +  RA   AN    A +  DRM  + L P +   + ++  LCK +  + A ++ D  ++ 
Sbjct: 149 LVFRAYSRANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDR-VKH 207

Query: 372 GVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSV 551
                A +Y+ ++    D  E   + K+   M + +C  D   YN +L+   + G+    
Sbjct: 208 QFQTRAKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEA 267

Query: 552 SAVWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNR 731
             ++  MG  G+ P   T+++ +  + +   +  A +  + M    + P   T  C+  +
Sbjct: 268 YKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKK 327

Query: 732 LIGSGFVDQIHVLADK-MERS 791
           L     V++ + L ++ +ERS
Sbjct: 328 LCKKEKVEEAYQLLNEIIERS 348


>ref|XP_004503476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like isoform X1 [Cicer arietinum]
          Length = 524

 Score =  398 bits (1023), Expect = e-108
 Identities = 185/290 (63%), Positives = 236/290 (81%), Gaps = 1/290 (0%)
 Frame = +3

Query: 6    IGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGT 185
            I DS +AR++FEEM+E+GC VD+LAYN+ LE+LCKGGN DEA  LF +M +K VE DA T
Sbjct: 230  IADSGKAREVFEEMVEQGCPVDLLAYNNLLESLCKGGNVDEAMNLFHDMLSKRVEVDAFT 289

Query: 186  YAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEML 365
            Y+IFIR+ C AND+H AF++LD+MK  NL+P+V TYNC+IK+LCKN+ VEEAYELLDEM+
Sbjct: 290  YSIFIRSHCVANDMHSAFRVLDQMKRCNLLPNVFTYNCIIKRLCKNKMVEEAYELLDEMI 349

Query: 366  ERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFD 545
              G+ PD WSYN I  +HCDHCEV  +L+L+SRMEKD C+PD+HTYN+VL++LIR GRFD
Sbjct: 350  SSGLKPDTWSYNAIQAYHCDHCEVNRALRLMSRMEKDDCLPDRHTYNLVLKLLIRIGRFD 409

Query: 546  SVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVECL 722
             V+ VWE+MG+K  YPSVSTY+VM+HGF  KKGKLEEAC+YFE+MVDEGIPPY +T+E L
Sbjct: 410  KVTEVWENMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACRYFEIMVDEGIPPYVTTIEML 469

Query: 723  RNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRGVKACGRQEMKKQT 872
            RNRL+G G +D I +LA+KM +STSCSIQE A  M G +A  +   + ++
Sbjct: 470  RNRLLGLGLLDNIEILANKMRQSTSCSIQELANIMTGARAAQKTSRRDES 519



 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 4/235 (1%)
 Frame = +3

Query: 6   IGDSNEARKLFEEMLE----RGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEP 173
           +G S +   L++ ++E      C +    +    +A  +    D A + F  M   G+EP
Sbjct: 122 LGSSKQFAILWDFLVEIRDSNCCEISNEIFWLIFKAYSRADLPDGAIRSFMRMDEFGIEP 181

Query: 174 DAGTYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELL 353
               + + +   C+   +  A +  D+ K   L+    TY+ +I    K     +A E+ 
Sbjct: 182 CINDFDMLLYILCKRKHVKQAQQFFDQAKNRFLL-TAKTYSILICGWGKIADSGKAREVF 240

Query: 354 DEMLERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRA 533
           +EM+E+G   D  +YN +L   C    V E++ L   M   +   D  TY++ ++    A
Sbjct: 241 EEMVEQGCPVDLLAYNNLLESLCKGGNVDEAMNLFHDMLSKRVEVDAFTYSIFIRSHCVA 300

Query: 534 GRFDSVSAVWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPP 698
               S   V + M    + P+V TY  ++    K   +EEA +  + M+  G+ P
Sbjct: 301 NDMHSAFRVLDQMKRCNLLPNVFTYNCIIKRLCKNKMVEEAYELLDEMISSGLKP 355


>ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Glycine max]
          Length = 523

 Score =  390 bits (1001), Expect = e-106
 Identities = 186/291 (63%), Positives = 232/291 (79%), Gaps = 5/291 (1%)
 Frame = +3

Query: 3    DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
            +IGDS +A  LF+ MLE+GC VD+LAYN+ L+ALCKGG  DEA  +F +M +K VEPDA 
Sbjct: 228  EIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAF 287

Query: 183  TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
            TY+IFI + C+A+D+  AF++LD+M+ YNL+P+V TYNC+IK+LCKNE VEEAY+LLDEM
Sbjct: 288  TYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEM 347

Query: 363  LERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRF 542
            + RGV PD WSYN I  +HCDHCEV  +L+L+ RMEKD C+PD+HTYNMVL++LIR GRF
Sbjct: 348  ISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRF 407

Query: 543  DSVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVEC 719
            D V+ VWE+M +K  YPSVSTY+VM+HGF  KKGKLEEACKYFEMM+DEGIPPY +TVE 
Sbjct: 408  DKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEM 467

Query: 720  LRNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRGVKAC----GRQEM 860
            LRNRL+G GF+D I +LA KM +STS +IQE A  M G +      GR EM
Sbjct: 468  LRNRLLGLGFIDHIEILAAKMRQSTSYAIQELANIMIGNRTAHNTLGRDEM 518



 Score = 75.1 bits (183), Expect = 6e-11
 Identities = 48/205 (23%), Positives = 97/205 (47%)
 Frame = +3

Query: 168 EPDAGTYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYE 347
           E ++  + +  RA  +AN    A +  +RM  + + P +H  + ++  LCK + V++A +
Sbjct: 144 EINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQ 203

Query: 348 LLDEMLERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLI 527
           L  +   R  +  A +Y+ +++   +  +  ++  L   M +  C  D   YN +LQ L 
Sbjct: 204 LFHQAKNR-FSLTAKTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALC 262

Query: 528 RAGRFDSVSAVWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPS 707
           + GR D    ++  M  K V P   TY++ +H +     ++ A +  + M    + P   
Sbjct: 263 KGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVF 322

Query: 708 TVECLRNRLIGSGFVDQIHVLADKM 782
           T  C+  +L  +  V++ + L D+M
Sbjct: 323 TYNCIIKQLCKNEHVEEAYQLLDEM 347


>ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Solanum tuberosum]
          Length = 550

 Score =  387 bits (994), Expect = e-105
 Identities = 185/281 (65%), Positives = 224/281 (79%), Gaps = 1/281 (0%)
 Frame = +3

Query: 3    DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
            D+G+  EA+KLF+EMLERGCSVD+LAYNS L++LCK G  DEA+  F +M + G+ PDA 
Sbjct: 254  DLGEVAEAQKLFDEMLERGCSVDLLAYNSILDSLCKAGKMDEAFNFFMKMRSIGLIPDAF 313

Query: 183  TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
            +Y+IFI   C ANDIH  F++LD+M+ Y LVP+V TYNC+IKKLCK +KV+EAY+L+DEM
Sbjct: 314  SYSIFIHGYCTANDIHSVFRVLDQMRRYKLVPNVFTYNCIIKKLCKTKKVDEAYQLIDEM 373

Query: 363  LERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRF 542
            +  GV PD WSYNTIL  HCDH EV  + +L+SRME++ C+PD+HTYNM+L+MLIR GRF
Sbjct: 374  ISEGVRPDCWSYNTILASHCDHNEVNLAHRLVSRMEQNNCLPDKHTYNMLLKMLIRVGRF 433

Query: 543  DSVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVEC 719
            D V  VWESM ++  YPSVSTY+VMVHGF  KKGKLEEACKYFEMM+DEGIPPY  T E 
Sbjct: 434  DRVEKVWESMEDRNFYPSVSTYSVMVHGFCQKKGKLEEACKYFEMMIDEGIPPYTETCEK 493

Query: 720  LRNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRGVKA 842
            LRNRLIG GF +Q  +LADKMERSTS  IQE A  MRG KA
Sbjct: 494  LRNRLIGHGFAEQTEILADKMERSTSSLIQELASVMRGNKA 534


>ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355524756|gb|AET05210.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 520

 Score =  387 bits (993), Expect = e-105
 Identities = 181/280 (64%), Positives = 225/280 (80%), Gaps = 1/280 (0%)
 Frame = +3

Query: 6    IGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGT 185
            IGDS +AR+LF+ MLE+GC VD+LAYN+ LEALCKGG+ DEA     +M +K VEPDA T
Sbjct: 226  IGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFT 285

Query: 186  YAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEML 365
            Y+IFIR+ C+AN++H AF +LD+M+  NL+P+V TYNC+IK+LCK +KVEEAY+LLDEM+
Sbjct: 286  YSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMI 345

Query: 366  ERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFD 545
              G+ PD WSYN I  +HCDHCEV  +LKL+SRMEKD C PD+HTYNMVL++LIR GRFD
Sbjct: 346  SSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFD 405

Query: 546  SVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVECL 722
              + VWE MG+K  YPSVSTY+VM+HG   KKGKLEEACKYF MM+DEGIPPY +T+E L
Sbjct: 406  KATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDTTIEML 465

Query: 723  RNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRGVKA 842
            RNRL+G G +D I +LA KM +STSCSIQE A  M G ++
Sbjct: 466  RNRLLGLGLLDNIEILAAKMRQSTSCSIQELANIMIGARS 505



 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 1/191 (0%)
 Frame = +3

Query: 3   DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
           D  + + A  + ++M       +V  YN  ++ LCK    +EAY+L  EM + G++PD  
Sbjct: 295 DANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTW 354

Query: 183 TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
           +Y       C+  +++ A KL+ RM+     PD HTYN V+K L +  + ++A E+ + M
Sbjct: 355 SYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVWECM 414

Query: 363 LERGVNPDAWSYNTILTFHC-DHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGR 539
            ++   P   +Y+ ++   C    ++ E+ K  + M  +   P   T  M+   L+  G 
Sbjct: 415 GDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDTTIEMLRNRLLGLGL 474

Query: 540 FDSVSAVWESM 572
            D++  +   M
Sbjct: 475 LDNIEILAAKM 485


>gb|EYU21622.1| hypothetical protein MIMGU_mgv1a019624mg, partial [Mimulus guttatus]
          Length = 510

 Score =  386 bits (991), Expect = e-104
 Identities = 188/290 (64%), Positives = 229/290 (78%), Gaps = 1/290 (0%)
 Frame = +3

Query: 3    DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
            +IGDS EA+KLF+EMLER  +VD+LA+NS L+ALCKGG  DEAY+LF+ M  KG+EPDA 
Sbjct: 217  EIGDSGEAQKLFDEMLEREYTVDLLAWNSVLDALCKGGKVDEAYELFQGMRTKGLEPDAY 276

Query: 183  TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
            +Y+IFIRA+C  NDIH AF++LD MK  NL P+V TYNC+IK LCKN K++EAYELLDEM
Sbjct: 277  SYSIFIRASCSENDIHSAFRVLDSMKRCNLAPNVFTYNCIIKSLCKNNKIDEAYELLDEM 336

Query: 363  LERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRF 542
            LERGV PD WSYNT+L FHCDH EV  +LKL+ RM+KD C  D+HTYNMVL+MLIR GRF
Sbjct: 337  LERGVKPDTWSYNTVLAFHCDHNEVNTALKLILRMDKDGCERDRHTYNMVLKMLIRIGRF 396

Query: 543  DSVSAVWESMGEKGVYPSVSTYAVMVHGFTKK-GKLEEACKYFEMMVDEGIPPYPSTVEC 719
            D +  VW SM +KG YP+VSTYAVM+HG  KK GKLEEA +YFEMM+DEGIPPY  T E 
Sbjct: 397  DRMEKVWYSMEKKGFYPTVSTYAVMIHGLCKKRGKLEEASRYFEMMIDEGIPPYTETCEV 456

Query: 720  LRNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRGVKACGRQEMKKQ 869
            LRN+LIG  F ++  +LADKMERS+S SI+E A  MRG +   R   +++
Sbjct: 457  LRNKLIGFRFAERTDILADKMERSSSESIREAASVMRGNRGSVRLRKEEE 506



 Score =  108 bits (269), Expect = 7e-21
 Identities = 68/257 (26%), Positives = 121/257 (47%)
 Frame = +3

Query: 18  NEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGTYAIF 197
           ++A + F +ML+ G +  V   +  L  LCK  +  +A + F ++    + P   +Y+I 
Sbjct: 152 SDAIRAFNKMLDYGITPCVDDLDQLLYTLCKRKHVKQAQEFFDQVKGGELIPTVKSYSIL 211

Query: 198 IRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGV 377
           ++   E  D   A KL D M       D+  +N V+  LCK  KV+EAYEL   M  +G+
Sbjct: 212 MKGWGEIGDSGEAQKLFDEMLEREYTVDLLAWNSVLDALCKGGKVDEAYELFQGMRTKGL 271

Query: 378 NPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSVSA 557
            PDA+SY+  +   C   ++  + ++L  M++    P+  TYN +++ L +  + D    
Sbjct: 272 EPDAYSYSIFIRASCSENDIHSAFRVLDSMKRCNLAPNVFTYNCIIKSLCKNNKIDEAYE 331

Query: 558 VWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNRLI 737
           + + M E+GV P   +Y  ++       ++  A K    M  +G      T   +   LI
Sbjct: 332 LLDEMLERGVKPDTWSYNTVLAFHCDHNEVNTALKLILRMDKDGCERDRHTYNMVLKMLI 391

Query: 738 GSGFVDQIHVLADKMER 788
             G  D++  +   ME+
Sbjct: 392 RIGRFDRMEKVWYSMEK 408



 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 46/197 (23%), Positives = 89/197 (45%)
 Frame = +3

Query: 192 IFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLER 371
           I  RA   AN    A +  ++M  Y + P V   + ++  LCK + V++A E  D++   
Sbjct: 140 IVFRAYSRANLPSDAIRAFNKMLDYGITPCVDDLDQLLYTLCKRKHVKQAQEFFDQVKGG 199

Query: 372 GVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSV 551
            + P   SY+ ++    +  +  E+ KL   M + +   D   +N VL  L + G+ D  
Sbjct: 200 ELIPTVKSYSILMKGWGEIGDSGEAQKLFDEMLEREYTVDLLAWNSVLDALCKGGKVDEA 259

Query: 552 SAVWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNR 731
             +++ M  KG+ P   +Y++ +     +  +  A +  + M    + P   T  C+   
Sbjct: 260 YELFQGMRTKGLEPDAYSYSIFIRASCSENDIHSAFRVLDSMKRCNLAPNVFTYNCIIKS 319

Query: 732 LIGSGFVDQIHVLADKM 782
           L  +  +D+ + L D+M
Sbjct: 320 LCKNNKIDEAYELLDEM 336


>ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Glycine max]
          Length = 523

 Score =  384 bits (986), Expect = e-104
 Identities = 179/278 (64%), Positives = 226/278 (81%), Gaps = 1/278 (0%)
 Frame = +3

Query: 3    DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
            DIGDS +A +LF+ MLE+GC VD+LAYN+ L+ALCKGG  DEA  +F +M +K VEPDA 
Sbjct: 228  DIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAF 287

Query: 183  TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
            TY+IFI + C+A+D+  A ++LD+M+ YN++P+V TYNC+IK+LCKNE VEEAY LLDEM
Sbjct: 288  TYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEM 347

Query: 363  LERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRF 542
            + RGV PD WSYN I  +HCDHCEV  +++L+ RMEKD C+PD+HTYNMVL++LIR GRF
Sbjct: 348  ISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRF 407

Query: 543  DSVSAVWESMGEKGVYPSVSTYAVMVHGF-TKKGKLEEACKYFEMMVDEGIPPYPSTVEC 719
            D V+ VW +MG+K  YPSVSTY+VM+HGF  KKGKLEEACKYFEMM+DEGIPPY +TVE 
Sbjct: 408  DKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEM 467

Query: 720  LRNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRG 833
            LRN+L+G GF+D I +LA KM +STS +IQE A  M G
Sbjct: 468  LRNQLLGLGFLDHIEILAAKMRQSTSYAIQELANIMIG 505



 Score = 85.5 bits (210), Expect = 5e-14
 Identities = 60/246 (24%), Positives = 111/246 (45%)
 Frame = +3

Query: 24  ARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGTYAIFIR 203
           A + F  M E G    +  ++  L  LCK  +  +A + F +   + +   A TY+I I 
Sbjct: 166 AIRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNRFLLT-AKTYSILIS 224

Query: 204 AACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNP 383
              +  D   A +L   M       D+  YN +++ LCK   V+EA  +  +ML + V P
Sbjct: 225 GWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEP 284

Query: 384 DAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSVSAVW 563
           DA++Y+  +  +CD  +V  +L++L +M +   +P+  TYN +++ L +    +    + 
Sbjct: 285 DAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLL 344

Query: 564 ESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNRLIGS 743
           + M  +GV P   +Y  +        ++  A +    M  +   P   T   +   LI  
Sbjct: 345 DEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRI 404

Query: 744 GFVDQI 761
           G  D++
Sbjct: 405 GRFDKV 410



 Score = 78.6 bits (192), Expect = 6e-12
 Identities = 51/215 (23%), Positives = 102/215 (47%)
 Frame = +3

Query: 138 LFREMGAKGVEPDAGTYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLC 317
           L    G+   E ++  + +  RA  +AN    A +  +RM  + + P ++ ++ ++  LC
Sbjct: 134 LIEMRGSCHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGIKPTINDFDKLLFILC 193

Query: 318 KNEKVEEAYELLDEMLERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQH 497
           K + V++A +  D+   R +   A +Y+ +++   D  +  ++ +L   M +  C  D  
Sbjct: 194 KTKHVKQAQQFFDQAKNRFLLT-AKTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLL 252

Query: 498 TYNMVLQMLIRAGRFDSVSAVWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMM 677
            YN +LQ L + G  D    ++  M  K V P   TY++ +H +     ++ A +  + M
Sbjct: 253 AYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKM 312

Query: 678 VDEGIPPYPSTVECLRNRLIGSGFVDQIHVLADKM 782
               I P   T  C+  RL  +  V++ ++L D+M
Sbjct: 313 RRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEM 347


>ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g52640, mitochondrial; Flags: Precursor
            gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535
            DUF domains [Arabidopsis thaliana]
            gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis
            thaliana] gi|62320530|dbj|BAD95108.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|332194712|gb|AEE32833.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  382 bits (982), Expect = e-103
 Identities = 174/277 (62%), Positives = 228/277 (82%), Gaps = 1/277 (0%)
 Frame = +3

Query: 6    IGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGT 185
            I D++ ARK+F+EMLER C VD+LAYN+ L+ALCK G+ D  YK+F+EMG  G++PDA +
Sbjct: 221  IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280

Query: 186  YAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEML 365
            +AIFI A C+A D+H A+K+LDRMK Y+LVP+V+T+N +IK LCKNEKV++AY LLDEM+
Sbjct: 281  FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340

Query: 366  ERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFD 545
            ++G NPD W+YN+I+ +HCDHCEV  + KLLSRM++ KC+PD+HTYNMVL++LIR GRFD
Sbjct: 341  QKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFD 400

Query: 546  SVSAVWESMGEKGVYPSVSTYAVMVHGFT-KKGKLEEACKYFEMMVDEGIPPYPSTVECL 722
              + +WE M E+  YP+V+TY VM+HG   KKGKLEEAC+YFEMM+DEGIPPY +TVE L
Sbjct: 401  RATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEML 460

Query: 723  RNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRG 833
            RNRL+G G +D + VLA KMERS+SCS+Q+ A  MRG
Sbjct: 461  RNRLVGWGQMDVVDVLAGKMERSSSCSVQDMAVEMRG 497



 Score =  107 bits (267), Expect = 1e-20
 Identities = 68/247 (27%), Positives = 116/247 (46%)
 Frame = +3

Query: 18  NEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGTYAIF 197
           +EA + F  M+E G    V   +  L +LC   + + A + F +    G+ P A TY+I 
Sbjct: 155 SEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSIL 214

Query: 198 IRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGV 377
           +R      D   A K+ D M   N V D+  YN ++  LCK+  V+  Y++  EM   G+
Sbjct: 215 VRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL 274

Query: 378 NPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSVSA 557
            PDA+S+   +  +CD  +V  + K+L RM++   +P+ +T+N +++ L +  + D    
Sbjct: 275 KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYL 334

Query: 558 VWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNRLI 737
           + + M +KG  P   TY  ++       ++  A K    M      P   T   +   LI
Sbjct: 335 LLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLI 394

Query: 738 GSGFVDQ 758
             G  D+
Sbjct: 395 RIGRFDR 401


>ref|XP_006392896.1| hypothetical protein EUTSA_v10011389mg [Eutrema salsugineum]
            gi|557089474|gb|ESQ30182.1| hypothetical protein
            EUTSA_v10011389mg [Eutrema salsugineum]
          Length = 523

 Score =  380 bits (975), Expect = e-103
 Identities = 173/277 (62%), Positives = 228/277 (82%), Gaps = 1/277 (0%)
 Frame = +3

Query: 6    IGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGT 185
            I D++ ARK+F+EMLE  C VD+LAYN+ L+ALCK G+ D AYK+F+EMG  G+EPDA +
Sbjct: 220  IRDASGARKVFDEMLETNCPVDLLAYNASLDALCKSGDVDGAYKMFQEMGNLGLEPDAYS 279

Query: 186  YAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEML 365
            YAIFI A C+A+D+H A+K+LDRM+ Y LVP+V+TYN +IK LCK E+V++AY LLDEM+
Sbjct: 280  YAIFIHAYCDADDVHSAYKVLDRMQRYELVPNVYTYNHIIKTLCKKERVDDAYLLLDEMI 339

Query: 366  ERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFD 545
            +RG NPD W+YN+I+ +HCDHCEV  + KL+SRM++ KC+PD+HTYNMVL++LIR GRFD
Sbjct: 340  QRGANPDTWTYNSIMAYHCDHCEVNRATKLISRMDRTKCLPDRHTYNMVLKLLIRIGRFD 399

Query: 546  SVSAVWESMGEKGVYPSVSTYAVMVHGFT-KKGKLEEACKYFEMMVDEGIPPYPSTVECL 722
             V+ +WE M E+  YP+V+TY VM+HG   KKGK+EEAC+YFEMM+D+GIPPY +TVE L
Sbjct: 400  RVTEMWEGMSEREFYPTVATYTVMIHGLVRKKGKIEEACRYFEMMIDDGIPPYSTTVEML 459

Query: 723  RNRLIGSGFVDQIHVLADKMERSTSCSIQEHAKTMRG 833
            RNRL+G G +D + VLA KMERS+SCS++E A  MRG
Sbjct: 460  RNRLVGWGQMDVVDVLAGKMERSSSCSVREMAVEMRG 496



 Score =  109 bits (272), Expect = 3e-21
 Identities = 71/247 (28%), Positives = 115/247 (46%)
 Frame = +3

Query: 21  EARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAGTYAIFI 200
           EA + F  M+E G    V   +  L +LC   + + A   F    A G+ P A TY+I +
Sbjct: 156 EASRAFNRMIEFGIKPCVDDLDQLLHSLCDRKHVNHAQDFFDRAKA-GIAPSAKTYSILV 214

Query: 201 RAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVN 380
           R      D   A K+ D M   N   D+  YN  +  LCK+  V+ AY++  EM   G+ 
Sbjct: 215 RGWARIRDASGARKVFDEMLETNCPVDLLAYNASLDALCKSGDVDGAYKMFQEMGNLGLE 274

Query: 381 PDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGRFDSVSAV 560
           PDA+SY   +  +CD  +V  + K+L RM++ + +P+ +TYN +++ L +  R D    +
Sbjct: 275 PDAYSYAIFIHAYCDADDVHSAYKVLDRMQRYELVPNVYTYNHIIKTLCKKERVDDAYLL 334

Query: 561 WESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPSTVECLRNRLIG 740
            + M ++G  P   TY  ++       ++  A K    M      P   T   +   LI 
Sbjct: 335 LDEMIQRGANPDTWTYNSIMAYHCDHCEVNRATKLISRMDRTKCLPDRHTYNMVLKLLIR 394

Query: 741 SGFVDQI 761
            G  D++
Sbjct: 395 IGRFDRV 401



 Score = 85.1 bits (209), Expect = 6e-14
 Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 1/209 (0%)
 Frame = +3

Query: 3   DIGDSNEARKLFEEMLERGCSVDVLAYNSFLEALCKGGNEDEAYKLFREMGAKGVEPDAG 182
           D  D + A K+ + M       +V  YN  ++ LCK    D+AY L  EM  +G  PD  
Sbjct: 289 DADDVHSAYKVLDRMQRYELVPNVYTYNHIIKTLCKKERVDDAYLLLDEMIQRGANPDTW 348

Query: 183 TYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEM 362
           TY   +   C+  +++ A KL+ RM     +PD HTYN V+K L +  + +   E+ + M
Sbjct: 349 TYNSIMAYHCDHCEVNRATKLISRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEMWEGM 408

Query: 363 LERGVNPDAWSYNTIL-TFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLIRAGR 539
            ER   P   +Y  ++        ++ E+ +    M  D   P   T  M+   L+  G+
Sbjct: 409 SEREFYPTVATYTVMIHGLVRKKGKIEEACRYFEMMIDDGIPPYSTTVEMLRNRLVGWGQ 468

Query: 540 FDSVSAVWESMGEKGVYPSVSTYAVMVHG 626
            D V  +   M E+    SV   AV + G
Sbjct: 469 MDVVDVLAGKM-ERSSSCSVREMAVEMRG 496



 Score = 68.2 bits (165), Expect = 8e-09
 Identities = 48/205 (23%), Positives = 87/205 (42%)
 Frame = +3

Query: 168 EPDAGTYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYE 347
           E  +  + I  RA   AN    A +  +RM  + + P V   + ++  LC  + V  A +
Sbjct: 135 EISSKVFWIVFRAYSRANLPGEASRAFNRMIEFGIKPCVDDLDQLLHSLCDRKHVNHAQD 194

Query: 348 LLDEMLERGVNPDAWSYNTILTFHCDHCEVTESLKLLSRMEKDKCMPDQHTYNMVLQMLI 527
             D   + G+ P A +Y+ ++       + + + K+   M +  C  D   YN  L  L 
Sbjct: 195 FFDRA-KAGIAPSAKTYSILVRGWARIRDASGARKVFDEMLETNCPVDLLAYNASLDALC 253

Query: 528 RAGRFDSVSAVWESMGEKGVYPSVSTYAVMVHGFTKKGKLEEACKYFEMMVDEGIPPYPS 707
           ++G  D    +++ MG  G+ P   +YA+ +H +     +  A K  + M    + P   
Sbjct: 254 KSGDVDGAYKMFQEMGNLGLEPDAYSYAIFIHAYCDADDVHSAYKVLDRMQRYELVPNVY 313

Query: 708 TVECLRNRLIGSGFVDQIHVLADKM 782
           T   +   L     VD  ++L D+M
Sbjct: 314 TYNHIIKTLCKKERVDDAYLLLDEM 338