BLASTX nr result
ID: Paeonia24_contig00027791
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00027791
(296 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009020029.1| RNA polymerase beta [Prunus mume] gi|5890610... 192 4e-47
emb|CAC88035.1| RNA polymerase beta I subunit [Atropa belladonna] 192 4e-47
prf||1211235Q rpoC-like ORF 548 192 4e-47
sp|P12116.1|RPOC1_TOBAC RecName: Full=DNA-directed RNA polymeras... 192 4e-47
gb|AHH30432.1| RNA polymerase beta (chloroplast) [Bartsia inaequ... 192 4e-47
ref|YP_009002249.1| RNA polymerase beta' subunit (chloroplast) [... 192 4e-47
emb|CCQ71611.1| RNA polymerase beta' subunit (chloroplast) [Salv... 192 4e-47
gb|AHE41652.1| RNA polymerase beta' subunit protein, partial (ch... 192 4e-47
gb|AHE41649.1| RNA polymerase beta' subunit protein, partial (ch... 192 4e-47
gb|AHE41648.1| RNA polymerase beta' subunit protein, partial (ch... 192 4e-47
gb|AHE41646.1| RNA polymerase beta' subunit protein, partial (ch... 192 4e-47
gb|AHE41644.1| RNA polymerase beta' subunit protein, partial (ch... 192 4e-47
gb|AHE41643.1| RNA polymerase beta' subunit protein, partial (ch... 192 4e-47
gb|AHE41641.1| RNA polymerase beta' subunit protein, partial (ch... 192 4e-47
gb|AHE41634.1| RNA polymerase beta' subunit protein, partial (ch... 192 4e-47
ref|YP_009000323.1| rpoC1 protein (chloroplast) [Arabis alpina] ... 192 4e-47
ref|YP_008994281.1| RNA polymerase beta [Melianthus villosus] gi... 192 4e-47
ref|YP_008965484.1| RNA polymerase beta [Pyrus spinosa] gi|56566... 192 4e-47
ref|XP_006360368.1| PREDICTED: DNA-directed RNA polymerase subun... 192 4e-47
ref|YP_008963682.1| RNA polymerase beta (chloroplast) [Liquidamb... 192 4e-47
>ref|YP_009020029.1| RNA polymerase beta [Prunus mume] gi|589061044|gb|AHK26865.1| RNA
polymerase beta [Prunus mume]
Length = 683
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 314 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 373
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 374 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 411
>emb|CAC88035.1| RNA polymerase beta I subunit [Atropa belladonna]
Length = 688
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 320 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 379
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 380 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 417
>prf||1211235Q rpoC-like ORF 548
Length = 548
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 180 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 239
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 240 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 277
>sp|P12116.1|RPOC1_TOBAC RecName: Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
Length = 680
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 312 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 371
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 372 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 409
>gb|AHH30432.1| RNA polymerase beta (chloroplast) [Bartsia inaequalis]
Length = 679
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 317 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 376
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 377 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 414
>ref|YP_009002249.1| RNA polymerase beta' subunit (chloroplast) [Pinguicula ehlersiae]
gi|575882131|emb|CDL78805.1| RNA polymerase beta'
subunit (chloroplast) [Pinguicula ehlersiae]
Length = 687
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 320 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 379
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 380 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 417
>emb|CCQ71611.1| RNA polymerase beta' subunit (chloroplast) [Salvia miltiorrhiza]
Length = 682
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 315 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 374
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 375 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 412
>gb|AHE41652.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Paeonia obovata]
Length = 639
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 295 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 354
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 355 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 392
>gb|AHE41649.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Rhodoleia championii]
Length = 639
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 295 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 354
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 355 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 392
>gb|AHE41648.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Philadelphus coronarius]
Length = 639
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 295 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 354
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 355 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 392
>gb|AHE41646.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Mytilaria laosensis]
Length = 487
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 143 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 202
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 203 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 240
>gb|AHE41644.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Gunnera manicata]
Length = 637
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 295 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 354
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 355 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 392
>gb|AHE41643.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Exbucklandia populnea]
Length = 470
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 126 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 185
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 186 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 223
>gb|AHE41641.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Disanthus cercidifolius subsp. longipes]
Length = 621
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 279 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 338
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 339 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 376
>gb|AHE41634.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Hamamelis mollis]
Length = 639
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 295 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 354
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 355 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 392
>ref|YP_009000323.1| rpoC1 protein (chloroplast) [Arabis alpina]
gi|571025795|emb|CCW28170.1| rpoC1 protein (chloroplast)
[Arabis alpina]
Length = 684
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 317 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 376
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 377 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 414
>ref|YP_008994281.1| RNA polymerase beta [Melianthus villosus]
gi|527355131|gb|AGS13000.1| RNA polymerase beta
[Melianthus villosus]
Length = 686
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 317 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 376
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 377 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 414
>ref|YP_008965484.1| RNA polymerase beta [Pyrus spinosa] gi|565666456|emb|CDI73556.1|
RNA polymerase beta [Pyrus spinosa]
Length = 687
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 320 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 379
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 380 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 417
>ref|XP_006360368.1| PREDICTED: DNA-directed RNA polymerase subunit beta'-like [Solanum
tuberosum]
Length = 581
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 213 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 272
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 273 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 310
>ref|YP_008963682.1| RNA polymerase beta (chloroplast) [Liquidambar formosana]
gi|491650362|gb|AGL13422.1| RNA polymerase beta
(chloroplast) [Liquidambar formosana]
Length = 682
Score = 192 bits (488), Expect = 4e-47
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +1
Query: 1 ARSTPGELVMCQKKIVQEAVNTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 180
+RSTPGELVMCQ+K+VQEAV+TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL
Sbjct: 313 SRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLL 372
Query: 181 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 294
GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV
Sbjct: 373 GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFV 410