BLASTX nr result

ID: Paeonia24_contig00027132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00027132
         (224 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    62   8e-08
gb|AAK29467.1| polyprotein-like [Solanum chilense]                     61   2e-07

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/69 (40%), Positives = 46/69 (66%)
 Frame = -3

Query: 207 MNGLRVDIKLYYGRDNFTLWQRKIRNILIQQDLLFVLEGKDKMPTGMEEDDWNMADMKAM 28
           M+G++ ++  + G + F+ WQR++R++LIQQ L  VL+   K P  M+ +DW   D +A 
Sbjct: 1   MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60

Query: 27  SSIELHISD 1
           S+I LH+SD
Sbjct: 61  SAIRLHLSD 69


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/70 (40%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = -3

Query: 207 MNGLRVDIKLYYG-RDNFTLWQRKIRNILIQQDLLFVLEGKDKMPTGMEEDDWNMADMKA 31
           M+G++ ++  + G +  F++WQR+++++LIQQ L   L GK K P  M+ +DW   D KA
Sbjct: 1   MSGVKYEVAKFNGDKPVFSMWQRRMKDLLIQQGLHKALGGKSKKPESMKLEDWEELDEKA 60

Query: 30  MSSIELHISD 1
            S+I LH++D
Sbjct: 61  ASAIRLHLTD 70


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