BLASTX nr result
ID: Paeonia24_contig00026890
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00026890
(612 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007042573.1| Pentatricopeptide repeat-containing protein ... 211 1e-52
ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containi... 207 3e-51
ref|XP_004514248.1| PREDICTED: pentatricopeptide repeat-containi... 204 2e-50
ref|XP_007143083.1| hypothetical protein PHAVU_007G042100g [Phas... 191 1e-46
ref|XP_007199641.1| hypothetical protein PRUPE_ppa021613mg [Prun... 191 2e-46
ref|XP_004243818.1| PREDICTED: putative pentatricopeptide repeat... 190 3e-46
ref|XP_006348971.1| PREDICTED: putative pentatricopeptide repeat... 189 4e-46
gb|EPS71925.1| hypothetical protein M569_02834, partial [Genlise... 122 1e-25
gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis] 92 1e-16
ref|XP_006407296.1| hypothetical protein EUTSA_v10020185mg [Eutr... 89 8e-16
ref|XP_003607763.1| Pentatricopeptide repeat-containing protein ... 89 8e-16
ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [A... 87 4e-15
ref|XP_004305093.1| PREDICTED: putative pentatricopeptide repeat... 84 3e-14
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat... 84 4e-14
gb|EPS63455.1| hypothetical protein M569_11327 [Genlisea aurea] 83 7e-14
ref|XP_002323645.2| pentatricopeptide repeat-containing family p... 81 2e-13
ref|XP_006299513.1| hypothetical protein CARUB_v10015683mg [Caps... 80 4e-13
ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
emb|CBI36131.3| unnamed protein product [Vitis vinifera] 80 4e-13
ref|NP_195454.1| pentatricopeptide repeat-containing protein [Ar... 80 4e-13
>ref|XP_007042573.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
gi|508706508|gb|EOX98404.1| Pentatricopeptide
repeat-containing protein [Theobroma cacao]
Length = 647
Score = 211 bits (537), Expect = 1e-52
Identities = 115/197 (58%), Positives = 138/197 (70%), Gaps = 1/197 (0%)
Frame = -3
Query: 589 RKRSLIYPTMLLFFQRSPVHLKFKTCFSFHI-VLQLMRSLSSNPAFPKLSNLSVLLQGHI 413
R++SL+ ML Q+ ++ T I ++ + SLSS + NLS+LLQG I
Sbjct: 8 RRQSLVSSAMLRSCQQFSAAFRYFTLSPSSIFAVEFLHSLSSTSS-SNFHNLSLLLQGRI 66
Query: 412 SRSHLLQIHARVFLLGAHQDNLIATRLIGHYPSRFALPVLYQLRIPNIFPFNAIIRVLSV 233
SHL QIHAR+F L AHQDNL+ATRLIGHYPS FAL V QL PNIFPFNAIIRVL+
Sbjct: 67 LHSHLRQIHARIFRLNAHQDNLVATRLIGHYPSSFALRVFNQLHNPNIFPFNAIIRVLAE 126
Query: 232 EGIFSQAFSFFKILKQHSLSPNDLTFSFVFKACFQSQDAQYVKQIHTHVIKTGFVHDPVV 53
G+F A SFF L Q SLSPNDLTFSF+ KACF S DAQYV QIHT++IK G++ DP V
Sbjct: 127 NGLFFLACSFFNNLIQRSLSPNDLTFSFLLKACFLSNDAQYVNQIHTYIIKLGYLCDPTV 186
Query: 52 YNGLLNVYAKGLKDLVS 2
NGLL+VYA+G KD+ S
Sbjct: 187 CNGLLSVYAQGFKDVAS 203
>ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 634
Score = 207 bits (526), Expect = 3e-51
Identities = 111/176 (63%), Positives = 131/176 (74%)
Frame = -3
Query: 529 LKFKTCFSFHIVLQLMRSLSSNPAFPKLSNLSVLLQGHISRSHLLQIHARVFLLGAHQDN 350
LKFK IV L S + A P +NL+ LLQG+I RSHLLQIHAR+F LGAHQDN
Sbjct: 16 LKFKP-----IVALLHSPSSCSIADP--TNLATLLQGNIPRSHLLQIHARIFYLGAHQDN 68
Query: 349 LIATRLIGHYPSRFALPVLYQLRIPNIFPFNAIIRVLSVEGIFSQAFSFFKILKQHSLSP 170
LIATRLIGHYPSR AL V + L+ PNIFPFNAIIRVL+ +G F A S F LK+ SLSP
Sbjct: 69 LIATRLIGHYPSRAALRVFHHLQNPNIFPFNAIIRVLAQDGHFFHALSVFNYLKRRSLSP 128
Query: 169 NDLTFSFVFKACFQSQDAQYVKQIHTHVIKTGFVHDPVVYNGLLNVYAKGLKDLVS 2
NDLTFSF+FK CF+++D +YV+QIH H+ K GF+ DP V NGL++VYAKG LVS
Sbjct: 129 NDLTFSFLFKPCFRTKDVRYVEQIHAHIQKIGFLSDPFVCNGLVSVYAKGFNSLVS 184
>ref|XP_004514248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cicer arietinum]
Length = 1334
Score = 204 bits (519), Expect = 2e-50
Identities = 104/175 (59%), Positives = 125/175 (71%)
Frame = -3
Query: 526 KFKTCFSFHIVLQLMRSLSSNPAFPKLSNLSVLLQGHISRSHLLQIHARVFLLGAHQDNL 347
K K C S I L RS SS NL+ LLQGH+S HLLQIHAR+F +GAHQDNL
Sbjct: 710 KLKHCSSSVIALLHSRSSSSTADPTNFQNLAALLQGHLSVPHLLQIHARIFQVGAHQDNL 769
Query: 346 IATRLIGHYPSRFALPVLYQLRIPNIFPFNAIIRVLSVEGIFSQAFSFFKILKQHSLSPN 167
IATRLIGHYPSR AL V +QL+ PNIFPFNAIIR+L+ +G F FS F LK+ SL PN
Sbjct: 770 IATRLIGHYPSRIALRVFHQLQNPNIFPFNAIIRILAEQGHFFHVFSLFNCLKRRSLFPN 829
Query: 166 DLTFSFVFKACFQSQDAQYVKQIHTHVIKTGFVHDPVVYNGLLNVYAKGLKDLVS 2
DLT SF+ KACF+S+D V+Q+H H++K G++ D V NGL+ VYAKG +LVS
Sbjct: 830 DLTLSFLLKACFKSKDTHCVEQVHAHILKMGYLSDTFVTNGLVAVYAKGFNNLVS 884
>ref|XP_007143083.1| hypothetical protein PHAVU_007G042100g [Phaseolus vulgaris]
gi|561016273|gb|ESW15077.1| hypothetical protein
PHAVU_007G042100g [Phaseolus vulgaris]
Length = 632
Score = 191 bits (486), Expect = 1e-46
Identities = 103/166 (62%), Positives = 121/166 (72%)
Frame = -3
Query: 499 IVLQLMRSLSSNPAFPKLSNLSVLLQGHISRSHLLQIHARVFLLGAHQDNLIATRLIGHY 320
IV L SS+ A P +NL+ LLQG++ S+L QIH R+F LGAHQDNL+ATRLIGHY
Sbjct: 19 IVALLHSRCSSSIAEP--TNLATLLQGNLPYSYLHQIHTRIFQLGAHQDNLVATRLIGHY 76
Query: 319 PSRFALPVLYQLRIPNIFPFNAIIRVLSVEGIFSQAFSFFKILKQHSLSPNDLTFSFVFK 140
PSR AL V L+ PNIFPFNAIIRVLS EG F AFS F LK+ LSPNDLTFSF+ K
Sbjct: 77 PSRIALRVFNHLQNPNIFPFNAIIRVLSQEGHFFHAFSVFNDLKRRPLSPNDLTFSFLLK 136
Query: 139 ACFQSQDAQYVKQIHTHVIKTGFVHDPVVYNGLLNVYAKGLKDLVS 2
ACF+S+D +YVKQIH H+ K G + D V NGL++VYAKG L S
Sbjct: 137 ACFRSKDPRYVKQIHAHIQKMGLLSDSSVCNGLVSVYAKGHNHLAS 182
>ref|XP_007199641.1| hypothetical protein PRUPE_ppa021613mg [Prunus persica]
gi|462395041|gb|EMJ00840.1| hypothetical protein
PRUPE_ppa021613mg [Prunus persica]
Length = 643
Score = 191 bits (484), Expect = 2e-46
Identities = 98/140 (70%), Positives = 112/140 (80%)
Frame = -3
Query: 421 GHISRSHLLQIHARVFLLGAHQDNLIATRLIGHYPSRFALPVLYQLRIPNIFPFNAIIRV 242
G IS LLQIHA+VF +GA QDNLIATRLIGHYPS AL V +QL+ PNIFPFNAIIRV
Sbjct: 60 GRISYPRLLQIHAQVFQVGAQQDNLIATRLIGHYPSHLALRVFHQLQKPNIFPFNAIIRV 119
Query: 241 LSVEGIFSQAFSFFKILKQHSLSPNDLTFSFVFKACFQSQDAQYVKQIHTHVIKTGFVHD 62
+ EG+FS AFS FK LKQ SLSPND TFSF+ KACF+SQ+++YVKQIHTHV+K GF+ +
Sbjct: 120 FAEEGLFSDAFSLFKSLKQTSLSPNDFTFSFLLKACFRSQNSRYVKQIHTHVMKMGFLCN 179
Query: 61 PVVYNGLLNVYAKGLKDLVS 2
V LL VYAKGLKDL S
Sbjct: 180 SFVCASLLAVYAKGLKDLGS 199
>ref|XP_004243818.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Solanum lycopersicum]
Length = 627
Score = 190 bits (482), Expect = 3e-46
Identities = 99/167 (59%), Positives = 123/167 (73%)
Frame = -3
Query: 502 HIVLQLMRSLSSNPAFPKLSNLSVLLQGHISRSHLLQIHARVFLLGAHQDNLIATRLIGH 323
H L RS SS S+L LL+G I+ +HL QIHARVF +GAHQDNLIATRLIG
Sbjct: 19 HYCLNFTRSFSSTSDLHS-SSLWNLLKGRITHNHLRQIHARVFRIGAHQDNLIATRLIGQ 77
Query: 322 YPSRFALPVLYQLRIPNIFPFNAIIRVLSVEGIFSQAFSFFKILKQHSLSPNDLTFSFVF 143
YPS F+L + +QL+IPNIFPFNAIIR+LS EG F+ AF F L+ SL PN+LTFSF+
Sbjct: 78 YPSNFSLRIFHQLKIPNIFPFNAIIRILSEEGSFTDAFLVFNKLRGQSLLPNELTFSFLL 137
Query: 142 KACFQSQDAQYVKQIHTHVIKTGFVHDPVVYNGLLNVYAKGLKDLVS 2
KAC +S ++ YV+Q+HT V+K GF DP + NGLL+VYA+GLK+L S
Sbjct: 138 KACSRSGNSYYVQQVHTLVVKLGFGEDPSLCNGLLSVYARGLKELHS 184
>ref|XP_006348971.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Solanum tuberosum]
Length = 627
Score = 189 bits (481), Expect = 4e-46
Identities = 99/167 (59%), Positives = 122/167 (73%)
Frame = -3
Query: 502 HIVLQLMRSLSSNPAFPKLSNLSVLLQGHISRSHLLQIHARVFLLGAHQDNLIATRLIGH 323
H L RS SS S+L LL+G IS +HL QIHARVF +GAHQDNLIATRLIG
Sbjct: 19 HYCLNFTRSFSSTSDLHS-SSLCNLLKGRISHNHLKQIHARVFRIGAHQDNLIATRLIGQ 77
Query: 322 YPSRFALPVLYQLRIPNIFPFNAIIRVLSVEGIFSQAFSFFKILKQHSLSPNDLTFSFVF 143
YPS +L +L+QL+ PN+FPFNAIIRVLS EG F+ AF F L+ SL PN+LTFSF+
Sbjct: 78 YPSNISLRILHQLKRPNLFPFNAIIRVLSEEGFFTDAFLVFNKLRDQSLLPNELTFSFLL 137
Query: 142 KACFQSQDAQYVKQIHTHVIKTGFVHDPVVYNGLLNVYAKGLKDLVS 2
KAC +S ++ YV+Q+HT V+K GF DP + NGLL+VYA+GLK+L S
Sbjct: 138 KACSRSGNSYYVQQVHTLVVKLGFGEDPSLCNGLLSVYARGLKELHS 184
>gb|EPS71925.1| hypothetical protein M569_02834, partial [Genlisea aurea]
Length = 583
Score = 122 bits (305), Expect = 1e-25
Identities = 66/143 (46%), Positives = 95/143 (66%), Gaps = 8/143 (5%)
Frame = -3
Query: 430 LLQGHISRSHLLQIHARVFLLGAHQDNLIATRLIGHYPSRFALPVLYQLRIPNIFPFNAI 251
LL+G I R LL+IH RVF + +D+L+ATRLIGHYP++ AL V LR PNIFP+NAI
Sbjct: 1 LLRGRICRRRLLEIHGRVFRMDVQEDDLVATRLIGHYPAKPALGVFRSLRNPNIFPYNAI 60
Query: 250 IRVLSV--EGIFSQAFSFFKILK-QHSLSPNDLTFSFVFKACF-----QSQDAQYVKQIH 95
IRVL+ G+ +A + FK LK + +PN+LTFSFV KA + ++ + Q+H
Sbjct: 61 IRVLAEGGGGLSGEALTIFKELKFSDAAAPNELTFSFVLKAVSAGEEEEEEEEAVLPQVH 120
Query: 94 THVIKTGFVHDPVVYNGLLNVYA 26
+HV+K+ ++ D + GL++ YA
Sbjct: 121 SHVLKSDYLRDSFLCYGLISAYA 143
>gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis]
Length = 688
Score = 92.0 bits (227), Expect = 1e-16
Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Frame = -3
Query: 478 SLSSNPAFPKLSNL----SVLLQGHISRSHLLQIHARVFLLGAHQDNLIATRLIGHY--- 320
S+ N A P S ++LLQG I+ +HL +HA + LG QDN + +
Sbjct: 2 SILCNRASPTTSKALQIKNLLLQGFITSNHLKHVHASLLRLGLDQDNFLLNLFFRYAFDF 61
Query: 319 -PSRFALPVLYQLRIPNIFPFNAIIRVLSVEGIFSQAFSFFKILKQHSLSPNDLTFSFVF 143
+ + L V + PNI+ +N +IR L F A F+ +++ PN TF FV
Sbjct: 62 GNTSYPLLVFRHTKQPNIYVWNTVIRGLVSSHCFDDAIDFYFSMRRQGFLPNGFTFPFVL 121
Query: 142 KACFQSQDAQYVKQIHTHVIKTGFVHDPVVYNGLLNVYAK 23
KAC + D Q +IHTHV+K GF D V LL++YA+
Sbjct: 122 KACARLSDFQLGLRIHTHVVKVGFDCDVFVKTSLLSLYAQ 161
>ref|XP_006407296.1| hypothetical protein EUTSA_v10020185mg [Eutrema salsugineum]
gi|557108442|gb|ESQ48749.1| hypothetical protein
EUTSA_v10020185mg [Eutrema salsugineum]
Length = 694
Score = 89.4 bits (220), Expect = 8e-16
Identities = 57/156 (36%), Positives = 78/156 (50%), Gaps = 5/156 (3%)
Frame = -3
Query: 475 LSSNPAFPKLSNLSVLLQGHISRSHLLQIHARVFLLGAHQDNLIATRLIGHYPSRF---- 308
L SN S + L+ G +S L QIHAR+ +LG + T+LI H S F
Sbjct: 12 LHSNSGIHSDSFYAALIDGSTHKSQLRQIHARLLVLGLQFSGFLITKLI-HASSSFGDIC 70
Query: 307 -ALPVLYQLRIPNIFPFNAIIRVLSVEGIFSQAFSFFKILKQHSLSPNDLTFSFVFKACF 131
A V L P IFP+NAIIR S +F A + ++ +SP+ TF + KAC
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNLFQDALLMYSKMQLARVSPDSFTFPHLLKACS 130
Query: 130 QSQDAQYVKQIHTHVIKTGFVHDPVVYNGLLNVYAK 23
+ Q + +H HV + GF D V NGL+ +YAK
Sbjct: 131 GLPNLQMGRLVHAHVFRLGFEADVFVQNGLIALYAK 166
>ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 871
Score = 89.4 bits (220), Expect = 8e-16
Identities = 49/101 (48%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Frame = -3
Query: 463 PAFPKLSNL----SVLLQGHISRSHLLQIHARVFLLGAHQDNLIATRLIGHYPSRFALPV 296
P F LS + LQGH+S HLLQIHA +F GAHQ NLIATRLIGHY S+ L V
Sbjct: 714 PTFHPLSQILPTSKTSLQGHLSLPHLLQIHAHIFQFGAHQHNLIATRLIGHYISQIDLCV 773
Query: 295 LYQLRIPNIFPFNAIIRVLSVEGIFSQAFSFFKILKQHSLS 173
+QL PN FPFN IIR L+ + F + ++ ++ S
Sbjct: 774 FHQLHNPNNFPFNDIIRFLAQKAYFLFVICWISLITGYAQS 814
>ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [Amborella trichopoda]
gi|548847192|gb|ERN06396.1| hypothetical protein
AMTR_s00016p00252780 [Amborella trichopoda]
Length = 428
Score = 87.0 bits (214), Expect = 4e-15
Identities = 54/154 (35%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Frame = -3
Query: 472 SSNPAFPKLSNLSVLLQGHISRSHLLQIHARVFLLGAHQDNLIATRLIG----HYPSRFA 305
SSNP+F LS LLQ + +HLLQIHA +F G H+D ++ T+LI H A
Sbjct: 24 SSNPSFSHYQALS-LLQKCSTSNHLLQIHAHLFRTGLHRDYILITKLINLCSIHQKIDHA 82
Query: 304 LPVLYQLRIPNIFPFNAIIRVLSVEGIFSQAFSFFKILKQHSLSPNDLTFSFVFKACFQS 125
V Q+ P F +N +IR +A + ++ H P+ T+ FV KAC
Sbjct: 83 TLVFNQIENPLTFTWNTMIRAYFKSNYPEEAILMYNLMVIHGFLPDKFTYPFVIKACVAF 142
Query: 124 QDAQYVKQIHTHVIKTGFVHDPVVYNGLLNVYAK 23
+ K+IH IK G V D + N L+ +Y K
Sbjct: 143 SSLEKGKEIHGRAIKAGMVPDIFLQNTLMELYMK 176
>ref|XP_004305093.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Fragaria vesca subsp. vesca]
Length = 688
Score = 84.0 bits (206), Expect = 3e-14
Identities = 51/140 (36%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Frame = -3
Query: 430 LLQGHISRSHLLQIHARVFLLGAHQDNLIATRLI----GHYPSRFALPVLYQLRIPNIFP 263
L++G S L HAR+ LG QDN + T L+ + +AL V ++ PN++
Sbjct: 22 LIEGFTSFKQLKHAHARLLRLGLDQDNHLLTLLLRSAFDFRQTNYALLVFHRTAEPNVYL 81
Query: 262 FNAIIRVLSVEGIFSQAFSFFKILKQHSLSPNDLTFSFVFKACFQSQDAQYVKQIHTHVI 83
FN IIR L + A + ++ L P+ TF FV KAC + D Q +HT V+
Sbjct: 82 FNTIIRGLVSHECWEDAIRLYGSMRTEGLFPDSYTFPFVLKACARRLDLQIGLSVHTLVV 141
Query: 82 KTGFVHDPVVYNGLLNVYAK 23
KTGF D V LL +YAK
Sbjct: 142 KTGFDFDVYVKTSLLCLYAK 161
>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 83.6 bits (205), Expect = 4e-14
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Frame = -3
Query: 469 SNPAFPKLSN----LSVLLQGHISRSHLLQIHARVFLLGAHQDNLIATRLI----GHYPS 314
S P P +S ++LQG S HL +HA + G DN + ++ +
Sbjct: 3 SRPTSPPISKGLEIKKLILQGFNSFKHLKHLHAHLLRFGLCHDNYLLNMILRCSFDFSDT 62
Query: 313 RFALPVLYQLRIPNIFPFNAIIRVLSVEGIFSQAFSFFKILKQHSLSPNDLTFSFVFKAC 134
+ + +Q++ PNIF +N +IR L F A F+ +++ PN+ TF FV KAC
Sbjct: 63 NYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKAC 122
Query: 133 FQSQDAQYVKQIHTHVIKTGFVHDPVVYNGLLNVYAK 23
+ D Q +IHT V+K GF D V L+ +YAK
Sbjct: 123 ARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAK 159
>gb|EPS63455.1| hypothetical protein M569_11327 [Genlisea aurea]
Length = 685
Score = 82.8 bits (203), Expect = 7e-14
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
Frame = -3
Query: 430 LLQGHISRSHLLQIHARVFLLGAHQD----NLIATRLIGHYPSRFALPVLYQLRIPNIFP 263
L++G + +HL Q+HAR+ HQD N++ + + V Q PN +
Sbjct: 18 LVRGFRAFTHLKQVHARLLRFELHQDHYLLNMVLKSAFNFCRPDYTIAVFGQTLRPNFYL 77
Query: 262 FNAIIRVLSVEGIFSQAFSFFKILKQHSLSPNDLTFSFVFKACFQSQDAQYVKQIHTHVI 83
+N +IR L FSQA +F ++++ PN+ TF FV K+C + D ++H+ V+
Sbjct: 78 YNTMIRGLVSNDCFSQAIEYFYMMRKQGFLPNNFTFPFVLKSCSRRMDLGLGVKVHSLVV 137
Query: 82 KTGFVHDPVVYNGLLNVYAK 23
K GF D V GL+ Y+K
Sbjct: 138 KAGFDTDVFVSTGLVGFYSK 157
>ref|XP_002323645.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550321449|gb|EEF05406.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 682
Score = 81.3 bits (199), Expect = 2e-13
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Frame = -3
Query: 430 LLQGHISRSHLLQIHARVFLLGAHQDNLIATRLI----GHYPSRFALPVLYQLRIPNIFP 263
L+QG HL IHA + LG +D + +++ + ++ +L Q + PNIF
Sbjct: 16 LIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFL 75
Query: 262 FNAIIRVLSVEGIFSQAFSFFKILKQHSLSPNDLTFSFVFKACFQSQDAQYVKQIHTHVI 83
FN +IR L + F ++ + +++ LSP+ TF FV KAC + D++ ++H+ V+
Sbjct: 76 FNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVV 135
Query: 82 KTGFVHDPVVYNGLLNVYAK 23
K G D V L+N+Y K
Sbjct: 136 KAGCEADAFVKISLINLYTK 155
>ref|XP_006299513.1| hypothetical protein CARUB_v10015683mg [Capsella rubella]
gi|482568222|gb|EOA32411.1| hypothetical protein
CARUB_v10015683mg [Capsella rubella]
Length = 694
Score = 80.5 bits (197), Expect = 4e-13
Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Frame = -3
Query: 475 LSSNPAFPKLSNLSVLLQGHISRSHLLQIHARVFLLGAHQDNLIATRLIGHYPS----RF 308
L +N S + L+ ++ L QIHAR+ +LG H + T+LI S F
Sbjct: 12 LYTNSGIHSDSFYASLIDSSTHKAQLRQIHARLLVLGLHFSGFLITKLIQASSSFGDVTF 71
Query: 307 ALPVLYQLRIPNIFPFNAIIRVLSVEGIFSQAFSFFKILKQHSLSPNDLTFSFVFKACFQ 128
A V L P IFP+NAIIR S F A + ++ +SP+ TF + KAC
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNSYFQDALLMYSKMQLARVSPDSFTFPHLLKACSG 131
Query: 127 SQDAQYVKQIHTHVIKTGFVHDPVVYNGLLNVYAK 23
+ +H+ V + GF D V NGL+ +YAK
Sbjct: 132 LSHLPMGRLVHSQVFRLGFEADVFVQNGLIALYAK 166
>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 80.5 bits (197), Expect = 4e-13
Identities = 61/185 (32%), Positives = 94/185 (50%), Gaps = 9/185 (4%)
Frame = -3
Query: 550 FQRSPVHLK-FKTCFSFHIVLQLMRSLSSNPAFPKLSNLSVLLQGHISRSHLL---QIHA 383
F + HLK +C + H S P SN + LLQ I+R + Q+HA
Sbjct: 48 FDNNQTHLKAIPSCSNPHA--------ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHA 99
Query: 382 RVFLLGAHQDNLIATRLIGHY---PSRFALPVLYQLRIP--NIFPFNAIIRVLSVEGIFS 218
+V L G D +IAT+L+ Y S + +L+ RIP NIF +N +IR + G +
Sbjct: 100 QVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFD-RIPKHNIFLWNVLIRGYAWNGPYE 158
Query: 217 QAFSFFKILKQHSLSPNDLTFSFVFKACFQSQDAQYVKQIHTHVIKTGFVHDPVVYNGLL 38
A + + + L P++ TF FV KAC ++ ++IH HV++TG+ D V L+
Sbjct: 159 AAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALI 218
Query: 37 NVYAK 23
++YAK
Sbjct: 219 DMYAK 223
>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 80.5 bits (197), Expect = 4e-13
Identities = 61/185 (32%), Positives = 94/185 (50%), Gaps = 9/185 (4%)
Frame = -3
Query: 550 FQRSPVHLK-FKTCFSFHIVLQLMRSLSSNPAFPKLSNLSVLLQGHISRSHLL---QIHA 383
F + HLK +C + H S P SN + LLQ I+R + Q+HA
Sbjct: 48 FDNNQTHLKAIPSCSNPHA--------ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHA 99
Query: 382 RVFLLGAHQDNLIATRLIGHY---PSRFALPVLYQLRIP--NIFPFNAIIRVLSVEGIFS 218
+V L G D +IAT+L+ Y S + +L+ RIP NIF +N +IR + G +
Sbjct: 100 QVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFD-RIPKHNIFLWNVLIRGYAWNGPYE 158
Query: 217 QAFSFFKILKQHSLSPNDLTFSFVFKACFQSQDAQYVKQIHTHVIKTGFVHDPVVYNGLL 38
A + + + L P++ TF FV KAC ++ ++IH HV++TG+ D V L+
Sbjct: 159 AAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALI 218
Query: 37 NVYAK 23
++YAK
Sbjct: 219 DMYAK 223
>ref|NP_195454.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis
thaliana] gi|7270720|emb|CAB80403.1| putative protein
[Arabidopsis thaliana] gi|332661386|gb|AEE86786.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 632
Score = 80.5 bits (197), Expect = 4e-13
Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 7/170 (4%)
Frame = -3
Query: 490 QLMRSLSSNPAFPKLSNLSVLLQGHISRSHLLQIHARVF---LLGAHQDNLIATRLIGHY 320
QL + ++ P L+VL+ S +LQIHA + LL + ++ +L Y
Sbjct: 15 QLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAY 74
Query: 319 PS----RFALPVLYQLRIPNIFPFNAIIRVLSVEGIFSQAFSFFKILKQHSLSPNDLTFS 152
S R +L + +Q P++F F A I S+ G+ QAF + L ++PN+ TFS
Sbjct: 75 ASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFS 134
Query: 151 FVFKACFQSQDAQYVKQIHTHVIKTGFVHDPVVYNGLLNVYAKGLKDLVS 2
+ K+C + K IHTHV+K G DP V GL++VYAKG D+VS
Sbjct: 135 SLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKG-GDVVS 179