BLASTX nr result
ID: Paeonia24_contig00026604
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00026604
(955 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci... 290 8e-76
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr... 288 2e-75
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v... 281 3e-73
emb|CBI26376.3| unnamed protein product [Vitis vinifera] 281 3e-73
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr... 278 2e-72
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ... 278 2e-72
ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1... 270 6e-70
ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, part... 270 8e-70
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso... 267 4e-69
gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis] 266 9e-69
ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like iso... 261 2e-67
ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform ... 261 4e-67
ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform ... 260 5e-67
ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arab... 260 6e-67
ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso... 259 1e-66
ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Caps... 258 2e-66
ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidop... 258 3e-66
dbj|BAD43030.1| putative double strand break repair protein (XRC... 258 3e-66
gb|EYU32990.1| hypothetical protein MIMGU_mgv1a012190mg [Mimulus... 251 4e-64
dbj|BAF03494.1| XRCC4 homolog [Populus nigra] 251 4e-64
>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
Length = 256
Score = 290 bits (741), Expect = 8e-76
Identities = 152/256 (59%), Positives = 181/256 (70%), Gaps = 9/256 (3%)
Frame = -2
Query: 924 RHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQP 745
RHTCLK+E+S + +PIF++GTW+ T FDL+IT+G++ W+CNASE+QV++RA+QWDQP
Sbjct: 4 RHTCLKLEISDAT---DPIFVKGTWFETHFDLSITDGLNVWLCNASEEQVKDRAAQWDQP 60
Query: 744 VSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSIT 565
V+EY++LAERYLGFQQ SVYGF D DG KRLSWTFEKEGTKLEWRWKC +PNSK +T
Sbjct: 61 VTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAPNSKKVT 120
Query: 564 TGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXFLGV 385
GI+DFLMDANIRLS+EVV KTQSFE+LKVEAEKCL FLGV
Sbjct: 121 AGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFNNEKLEFESAIYAKFLGV 180
Query: 384 LNXXXXXXXXXXXXXXKTAGKRPV-EEEEVSTDKTESYDETSGDEKSEEETTKRPTGTS- 211
LN K A + +EEE STDKTES+DE S D+KSEEE K T TS
Sbjct: 181 LNSKKSKLRELRDKLSKQAVMGDLQQEEEQSTDKTESFDEGSDDDKSEEEPAKAITSTSK 240
Query: 210 -------RGQKRISRK 184
RG+KRISRK
Sbjct: 241 GVPASRARGRKRISRK 256
>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
gi|557522035|gb|ESR33402.1| hypothetical protein
CICLE_v10005690mg [Citrus clementina]
Length = 256
Score = 288 bits (738), Expect = 2e-75
Identities = 150/254 (59%), Positives = 179/254 (70%), Gaps = 8/254 (3%)
Frame = -2
Query: 921 HTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQPV 742
HTCLK+E+ + +PIF++GTW+ T FDL+IT+G++AW+CNASE+QV++RA+ WDQPV
Sbjct: 6 HTCLKLEIPDAT---DPIFVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAALWDQPV 62
Query: 741 SEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSITT 562
+EYV+LAERYLGFQQ SVYGF D DG KRLSWTFEKEGTKLEWRWKC +PNSK +T
Sbjct: 63 TEYVKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAPNSKKVTA 122
Query: 561 GIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXFLGVL 382
GI+DFLMDANIRLS+EVV KTQSFE+LKVEAEKCL FLGVL
Sbjct: 123 GILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAIYAKFLGVL 182
Query: 381 NXXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRPTGTS--- 211
N K A +++EE STDKTES+DE S D+KSEEE K T TS
Sbjct: 183 NSKKSKLRELRDKLSKQAVMGDLQQEEQSTDKTESFDEGSDDDKSEEEPAKDITSTSKGV 242
Query: 210 -----RGQKRISRK 184
RG+KRISRK
Sbjct: 243 PASRARGRKRISRK 256
>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
Length = 259
Score = 281 bits (719), Expect = 3e-73
Identities = 148/260 (56%), Positives = 183/260 (70%), Gaps = 10/260 (3%)
Frame = -2
Query: 939 MDDTPRHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERAS 760
M+ TPRH+CLK+++ +S EPIFI+ TW+ + F L+IT+G+ AW+CNASED+V ERA+
Sbjct: 1 MEPTPRHSCLKLQIPNQS---EPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAA 57
Query: 759 QWDQPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPN 580
QWDQPVS+Y+ LAER+LGFQQ SVYGF D GDG +RLSWTFEKEGTKLEWRWKC LSP+
Sbjct: 58 QWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPD 117
Query: 579 SKSITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXX 400
S+S T G++DFLM+ANIRLSEEVV KTQSFE+LKVEAEKCL
Sbjct: 118 SRSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYA 177
Query: 399 XFLGVLN--XXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKR 226
FLGVLN +T GK P EE+E STDKT S+D+ S +E EEE++K
Sbjct: 178 KFLGVLNSKKAKLRELRDQISKEETTGKLPQEEDE-STDKTLSFDDESDNEAIEEESSKN 236
Query: 225 PTGTS--------RGQKRIS 190
TGTS RG+KR++
Sbjct: 237 LTGTSKHVSTSRPRGRKRVA 256
>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 281 bits (719), Expect = 3e-73
Identities = 148/260 (56%), Positives = 183/260 (70%), Gaps = 10/260 (3%)
Frame = -2
Query: 939 MDDTPRHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERAS 760
M+ TPRH+CLK+++ +S EPIFI+ TW+ + F L+IT+G+ AW+CNASED+V ERA+
Sbjct: 1 MEPTPRHSCLKLQIPNQS---EPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAA 57
Query: 759 QWDQPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPN 580
QWDQPVS+Y+ LAER+LGFQQ SVYGF D GDG +RLSWTFEKEGTKLEWRWKC LSP+
Sbjct: 58 QWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPD 117
Query: 579 SKSITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXX 400
S+S T G++DFLM+ANIRLSEEVV KTQSFE+LKVEAEKCL
Sbjct: 118 SRSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYA 177
Query: 399 XFLGVLN--XXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKR 226
FLGVLN +T GK P EE+E STDKT S+D+ S +E EEE++K
Sbjct: 178 KFLGVLNSKKAKLRELRDQISKEETTGKLPQEEDE-STDKTLSFDDESDNEAIEEESSKN 236
Query: 225 PTGTS--------RGQKRIS 190
TGTS RG+KR++
Sbjct: 237 LTGTSKHVSTSRPRGRKRVA 256
>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
gi|557522040|gb|ESR33407.1| hypothetical protein
CICLE_v10005689mg [Citrus clementina]
Length = 256
Score = 278 bits (712), Expect = 2e-72
Identities = 148/256 (57%), Positives = 178/256 (69%), Gaps = 9/256 (3%)
Frame = -2
Query: 924 RHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQP 745
RHTCLK+E+ + +PIF +GTW+ T FDL+IT+G++AW+CNASE+QV++RA+QWDQP
Sbjct: 4 RHTCLKLEIPDAT---DPIFAKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWDQP 60
Query: 744 VSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSIT 565
V+EY++LAERYLGFQQ SVYGF D DG KRLSWTFEKEGTKLEWRWK +PNSK +T
Sbjct: 61 VTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKFGPAPNSKKVT 120
Query: 564 TGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXFLGV 385
GI+DFLMDANIRLS+EVV KTQSFE+LKVE +KCL FLGV
Sbjct: 121 AGILDFLMDANIRLSDEVVTKTQSFERLKVETQKCLAQSERFKNEKVEFESAIYSKFLGV 180
Query: 384 LNXXXXXXXXXXXXXXKTAGKRPV-EEEEVSTDKTESYDETSGDEKSEEETTKRPTGTS- 211
LN K A + +EEE STDKTES+D S D+KSEE+ TK T TS
Sbjct: 181 LNSKKSKLRELRDKLSKQAVMGDLQQEEEESTDKTESFDGGSDDDKSEEQPTKDITSTSI 240
Query: 210 -------RGQKRISRK 184
RG+KRISRK
Sbjct: 241 GVPASRARGRKRISRK 256
>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
putative [Ricinus communis]
Length = 265
Score = 278 bits (711), Expect = 2e-72
Identities = 146/261 (55%), Positives = 180/261 (68%), Gaps = 11/261 (4%)
Frame = -2
Query: 933 DTPRHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERASQW 754
+T RHTCLK+E++ EPIF++GTW+ + F L+IT+G++AW+CNA+E QV+ERA+QW
Sbjct: 11 ETARHTCLKLEIT------EPIFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAAQW 64
Query: 753 DQPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSK 574
DQPVSEY+ LAE YLGFQQ S+Y F D GD KRLSWTFEKEGTKLEWRWKC+ SP++K
Sbjct: 65 DQPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPDNK 124
Query: 573 SITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXF 394
T GI+DFLMDANIRLSEEVV+KT SFE+LK EA+KCL F
Sbjct: 125 MTTAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQSERFAGEKTEFESSIYAKF 184
Query: 393 LGVLN--XXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDETSGD-EKSEEETTKRP 223
L VLN + +GK P EEEE STDKTES++E S D +KSEEE ++
Sbjct: 185 LAVLNSKKRKLRQLRDQLSKKEASGKLPQEEEEESTDKTESFEEDSSDGDKSEEEPPEKV 244
Query: 222 TGTS--------RGQKRISRK 184
TGTS RG+KRI+RK
Sbjct: 245 TGTSEDKPSSRGRGRKRITRK 265
>ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao]
gi|508714033|gb|EOY05930.1| DNA repair protein XRCC4,
putative isoform 1 [Theobroma cacao]
Length = 263
Score = 270 bits (690), Expect = 6e-70
Identities = 147/261 (56%), Positives = 173/261 (66%), Gaps = 12/261 (4%)
Frame = -2
Query: 930 TPRHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWD 751
T RHTCLK+E+ + EPIF++GTW+ FD++IT+G+ AW+CNA+E++V+ERA+QWD
Sbjct: 8 TTRHTCLKLEIPST----EPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERAAQWD 63
Query: 750 QPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKS 571
QPV+EY+ELAERYLGFQQ SVY F D GD KRLSW FEKEGTKLEWRWK R SP+S+
Sbjct: 64 QPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSPDSQK 123
Query: 570 ITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXFL 391
IT GI+DFLMDANIRLSEEV RKTQSFEKLKVEAEKCL FL
Sbjct: 124 ITGGILDFLMDANIRLSEEVFRKTQSFEKLKVEAEKCLEQSERSTNEKMEFESEIYAKFL 183
Query: 390 GVLN--XXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRPT- 220
GVLN +T GK +EEE+ STDKTESY S E EEE K T
Sbjct: 184 GVLNSKKAKLRELRDQLSKQETTGKALMEEED-STDKTESYHTGSDAEGGEEEPEKNLTS 242
Query: 219 ---------GTSRGQKRISRK 184
G RG+KR +RK
Sbjct: 243 TCKDVPAAAGRGRGRKRATRK 263
>ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina]
gi|557522045|gb|ESR33412.1| hypothetical protein
CICLE_v10007171mg, partial [Citrus clementina]
Length = 243
Score = 270 bits (689), Expect = 8e-70
Identities = 142/237 (59%), Positives = 167/237 (70%), Gaps = 9/237 (3%)
Frame = -2
Query: 867 FIQGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQPVSEYVELAERYLGFQQFDS 688
+++GTW+ T FDL+IT+G++AW+CNASE+QV++RA+QWDQPV+EYV+LAERYLGFQQ S
Sbjct: 7 YVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWDQPVTEYVKLAERYLGFQQPGS 66
Query: 687 VYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSITTGIMDFLMDANIRLSEEVV 508
VY F D DG KRLSWTFEKEGTKLEWRWKC +PNSK +T GI+DFLMDANIRLS+EVV
Sbjct: 67 VYAFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAPNSKKVTAGILDFLMDANIRLSDEVV 126
Query: 507 RKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXFLGVLNXXXXXXXXXXXXXXKTA 328
KTQSFE+LKVEAEKCL FLGVLN K A
Sbjct: 127 TKTQSFERLKVEAEKCLAQSERFKNEKLEFESAVYAKFLGVLNSKKSKLRELRDKLSKQA 186
Query: 327 GKRPV-EEEEVSTDKTESYDETSGDEKSEEETTKRPTGTS--------RGQKRISRK 184
+ +EEE STDKTES+DE S D+KSEEE K T TS RG+KRISRK
Sbjct: 187 VMGDLQQEEEQSTDKTESFDEGSDDDKSEEEPAKDITSTSKGVPASRARGRKRISRK 243
>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
tuberosum]
Length = 267
Score = 267 bits (683), Expect = 4e-69
Identities = 137/242 (56%), Positives = 167/242 (69%), Gaps = 2/242 (0%)
Frame = -2
Query: 930 TPRHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWD 751
+P+HTCLK+ +S K E IF++GTW+S+ FDL IT+G+ +W C+ASE++VEERASQWD
Sbjct: 5 SPKHTCLKLVISNK----EQIFVKGTWFSSHFDLFITDGLQSWTCHASEEEVEERASQWD 60
Query: 750 QPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKS 571
QPVSEY++LAE+YLGFQQ S YGF D G G KRLSWTFEKEGTKLEWRWKC+ S NSK
Sbjct: 61 QPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQPSSNSKK 120
Query: 570 ITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXFL 391
T I+DFLMDANIRLS+EVV KT+SFE++KVEAEKCL FL
Sbjct: 121 TTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSREKEEFESAIYAKFL 180
Query: 390 GVLN--XXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRPTG 217
GVLN TA + PVEE+ STD+T+++DE S +E S EE K G
Sbjct: 181 GVLNSKKKKLRELRDKLSKQGTAVEEPVEEDAQSTDRTKTFDEGSDEEMSGEEVEKEDVG 240
Query: 216 TS 211
TS
Sbjct: 241 TS 242
>gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]
Length = 257
Score = 266 bits (680), Expect = 9e-69
Identities = 143/263 (54%), Positives = 174/263 (66%), Gaps = 11/263 (4%)
Frame = -2
Query: 939 MDDTPRHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERAS 760
M+++ RHTCLK+E +PIF+ TW+ + F+L++T+G AWIC+ASE++V +RA+
Sbjct: 1 MEESKRHTCLKLE----PKDSDPIFVNATWFPSHFNLSVTDGHHAWICHASEEEVRDRAA 56
Query: 759 QWDQPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPN 580
QWDQPV EYV LAERYLGFQQ DSVY F D GDG KRLSWTFEKEGTKL+WRWKC+ +P+
Sbjct: 57 QWDQPVPEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFEKEGTKLQWRWKCQPAPD 116
Query: 579 SKSITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXX 400
SK T +DFLMDANIRLSEEVV K+QSFE+LKVEAEKCL
Sbjct: 117 SKKTTAETLDFLMDANIRLSEEVVIKSQSFERLKVEAEKCLEQSEKISNEKMEFESTLYA 176
Query: 399 XFLGVLN---XXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTK 229
FLGVLN AGK P +EE STDKTES+D+ S D K EEE+++
Sbjct: 177 KFLGVLNSKKAKLRELRAQLEKNDPAAGKLP--QEEGSTDKTESFDDGSDDGKGEEESSE 234
Query: 228 RPTGT--------SRGQKRISRK 184
TGT SRG+KR RK
Sbjct: 235 NVTGTSKGAQTSRSRGRKRTVRK 257
>ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Fragaria vesca
subsp. vesca]
Length = 259
Score = 261 bits (668), Expect = 2e-67
Identities = 141/258 (54%), Positives = 171/258 (66%), Gaps = 10/258 (3%)
Frame = -2
Query: 927 PRHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQ 748
PR +CLK+E + +PIF++GTW+ +RFDL+IT+G++AW+C+ASED V +RA+QWDQ
Sbjct: 9 PRQSCLKLE----PKESQPIFVKGTWFHSRFDLSITDGLNAWVCHASEDAVRDRAAQWDQ 64
Query: 747 PVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSI 568
PV +YV LAERYLGFQ DSVY F D GDG KRLSWTF+KEGTKLEWRWKC SPNSK
Sbjct: 65 PVPDYVSLAERYLGFQHPDSVYKFTDAGDGHKRLSWTFDKEGTKLEWRWKCEPSPNSKET 124
Query: 567 TTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXFLG 388
T ++DFLMDAN+ LSEEVVRKTQSFE+LKVEAE CL FLG
Sbjct: 125 TAAVLDFLMDANVGLSEEVVRKTQSFERLKVEAEMCLIQSERIANEKIEFESAVYAKFLG 184
Query: 387 VLN--XXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRPTGT 214
VLN + AGK P E+EE STDKTE+Y S DE SE ++ K P T
Sbjct: 185 VLNSKKTKLRELRDKLSKQEAAGKLP-EQEEESTDKTETY--VSDDENSEVDSLKDPPPT 241
Query: 213 SR--------GQKRISRK 184
S+ G+KR +K
Sbjct: 242 SKDIPSSRSQGRKRAFQK 259
>ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Theobroma cacao]
gi|508714034|gb|EOY05931.1| DNA ligase iv-binding
protein XRCC4 isoform 2 [Theobroma cacao]
Length = 276
Score = 261 bits (666), Expect = 4e-67
Identities = 147/274 (53%), Positives = 173/274 (63%), Gaps = 25/274 (9%)
Frame = -2
Query: 930 TPRHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWD 751
T RHTCLK+E+ + EPIF++GTW+ FD++IT+G+ AW+CNA+E++V+ERA+QWD
Sbjct: 8 TTRHTCLKLEIPST----EPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERAAQWD 63
Query: 750 QPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKS 571
QPV+EY+ELAERYLGFQQ SVY F D GD KRLSW FEKEGTKLEWRWK R SP+S+
Sbjct: 64 QPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSPDSQK 123
Query: 570 ITTGIMDFLMDANIRLS-------------EEVVRKTQSFEKLKVEAEKCLXXXXXXXXX 430
IT GI+DFLMDANIRLS EEV RKTQSFEKLKVEAEKCL
Sbjct: 124 ITGGILDFLMDANIRLSHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKCLEQSERSTNE 183
Query: 429 XXXXXXXXXXXFLGVLN--XXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDETSGD 256
FLGVLN +T GK +EEE+ STDKTESY S
Sbjct: 184 KMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEED-STDKTESYHTGSDA 242
Query: 255 EKSEEETTKRPT----------GTSRGQKRISRK 184
E EEE K T G RG+KR +RK
Sbjct: 243 EGGEEEPEKNLTSTCKDVPAAAGRGRGRKRATRK 276
>ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Theobroma cacao]
gi|508714035|gb|EOY05932.1| DNA ligase iv-binding
protein XRCC4 isoform 3 [Theobroma cacao]
Length = 277
Score = 260 bits (665), Expect = 5e-67
Identities = 147/275 (53%), Positives = 173/275 (62%), Gaps = 26/275 (9%)
Frame = -2
Query: 930 TPRHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWD 751
T RHTCLK+E+ + EPIF++GTW+ FD++IT+G+ AW+CNA+E++V+ERA+QWD
Sbjct: 8 TTRHTCLKLEIPST----EPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERAAQWD 63
Query: 750 QPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKS 571
QPV+EY+ELAERYLGFQQ SVY F D GD KRLSW FEKEGTKLEWRWK R SP+S+
Sbjct: 64 QPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSPDSQK 123
Query: 570 ITTGIMDFLMDANIRLS--------------EEVVRKTQSFEKLKVEAEKCLXXXXXXXX 433
IT GI+DFLMDANIRLS EEV RKTQSFEKLKVEAEKCL
Sbjct: 124 ITGGILDFLMDANIRLSKHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKCLEQSERSTN 183
Query: 432 XXXXXXXXXXXXFLGVLN--XXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDETSG 259
FLGVLN +T GK +EEE+ STDKTESY S
Sbjct: 184 EKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEED-STDKTESYHTGSD 242
Query: 258 DEKSEEETTKRPT----------GTSRGQKRISRK 184
E EEE K T G RG+KR +RK
Sbjct: 243 AEGGEEEPEKNLTSTCKDVPAAAGRGRGRKRATRK 277
>ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arabidopsis lyrata subsp.
lyrata] gi|297329239|gb|EFH59658.1| hypothetical protein
ARALYDRAFT_479818 [Arabidopsis lyrata subsp. lyrata]
Length = 248
Score = 260 bits (664), Expect = 6e-67
Identities = 138/254 (54%), Positives = 178/254 (70%), Gaps = 2/254 (0%)
Frame = -2
Query: 942 VMDDTPRHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERA 763
V + +HTCL++E+S +PIF++GTW+++ FD+++T+G +WICNA+E++V ERA
Sbjct: 2 VESEKTKHTCLRLEISGA----DPIFVKGTWHNSHFDISVTDGSSSWICNATEEEVAERA 57
Query: 762 SQWDQPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSP 583
+QWDQPVSEY+ELAERYLGFQQ +SVYGF D +GSKRLSWTFEKEGTKLEWRWKC+ S
Sbjct: 58 AQWDQPVSEYLELAERYLGFQQPNSVYGFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSH 117
Query: 582 NSKSITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXX 403
+SK IT GI+DFL++ANIRLSEEVV KT+SFEK+K EAE+CL
Sbjct: 118 DSKKITVGILDFLLEANIRLSEEVVNKTRSFEKMKCEAERCLAQGEKLCEEKTEFENATY 177
Query: 402 XXFLGVLNXXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDE-TSGDEKSEEETTKR 226
FL VLN R VEEEE STDKTES+D S +E+SEEE +K+
Sbjct: 178 AKFLSVLNAKKAKLRALRDKGDSV---RAVEEEE-STDKTESFDSGRSDNEQSEEEASKK 233
Query: 225 PTGT-SRGQKRISR 187
+ + +RG+KR R
Sbjct: 234 ASSSKARGRKRAVR 247
>ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum
lycopersicum]
Length = 254
Score = 259 bits (662), Expect = 1e-66
Identities = 136/243 (55%), Positives = 166/243 (68%), Gaps = 2/243 (0%)
Frame = -2
Query: 930 TPRHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWD 751
+P+HTCLK+ +S K E IF++GTW+S+ FDL IT+G+ +W C+ASE++VEERASQWD
Sbjct: 5 SPKHTCLKLVISNK----EQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERASQWD 60
Query: 750 QPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKS 571
QPVSEY++L E+YLGFQQ SVYGF D G G KRLSWTFEKEGTKLEWRWKC+ S NSK
Sbjct: 61 QPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQSSSNSKK 120
Query: 570 ITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXFL 391
T I+DFLMDANIRLS+EVV KT+SFE++KVEAEKCL FL
Sbjct: 121 TTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSKEKEEFESAIYAKFL 180
Query: 390 GVLN--XXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRPTG 217
GVLN T+ + PVEE+ STD+TE++DE E S EE K G
Sbjct: 181 GVLNAKKKKLRELRDKLSKQATSVEEPVEEDAQSTDRTETFDE----EISGEEVEKDDVG 236
Query: 216 TSR 208
TS+
Sbjct: 237 TSK 239
>ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Capsella rubella]
gi|482567111|gb|EOA31300.1| hypothetical protein
CARUB_v10014474mg [Capsella rubella]
Length = 249
Score = 258 bits (659), Expect = 2e-66
Identities = 138/252 (54%), Positives = 178/252 (70%), Gaps = 3/252 (1%)
Frame = -2
Query: 942 VMDDTPRHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERA 763
V + +HTCL++E+S +PIF++GTWY +RFD+++T+G +WICNA+E++V ERA
Sbjct: 2 VESERTKHTCLRLEISGA----DPIFVKGTWYHSRFDISVTDGSSSWICNATEEEVAERA 57
Query: 762 SQWDQPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSP 583
+QWDQPVSEY+ELAE+YLGFQQ DS+YGF D +G KRLSWTFEKEGTKLEWRWKC+ S
Sbjct: 58 AQWDQPVSEYLELAEQYLGFQQPDSIYGFSDALEGCKRLSWTFEKEGTKLEWRWKCKPSH 117
Query: 582 NSKSITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXX 403
+SK IT G++DFLM++NIRLSEEVV KT+SFEK+K EAEKCL
Sbjct: 118 DSKKITVGVLDFLMESNIRLSEEVVNKTRSFEKMKSEAEKCLAQGQKLCKEKTEFEDATY 177
Query: 402 XXFLGVLNXXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYD--ETSGDEKSEEETTK 229
FL VLN + +GK VEEEE STDKTES+D E S +E+ EE +K
Sbjct: 178 AKFLSVLN--AKKAKLRALRDKEDSGK-AVEEEE-STDKTESFDDSERSDNEQGEEVDSK 233
Query: 228 RPTGT-SRGQKR 196
+ T + +RG+KR
Sbjct: 234 KATSSKARGRKR 245
>ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidopsis thaliana]
gi|238479872|ref|NP_001154639.1| DNA repair protein
XRCC4-like protein [Arabidopsis thaliana]
gi|85701292|sp|Q682V0.2|XRCC4_ARATH RecName: Full=DNA
repair protein XRCC4 gi|9800643|gb|AAF91285.2|AF233528_1
putative double strand break repair protein [Arabidopsis
thaliana] gi|9294200|dbj|BAB02102.1| unnamed protein
product [Arabidopsis thaliana]
gi|332643196|gb|AEE76717.1| DNA repair protein
XRCC4-like protein [Arabidopsis thaliana]
gi|332643197|gb|AEE76718.1| DNA repair protein
XRCC4-like protein [Arabidopsis thaliana]
Length = 264
Score = 258 bits (658), Expect = 3e-66
Identities = 137/254 (53%), Positives = 177/254 (69%), Gaps = 2/254 (0%)
Frame = -2
Query: 942 VMDDTPRHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERA 763
V + +HTCL++E+S +PIF++GTW+++RFD+++T+G +WICNA+E++V ERA
Sbjct: 18 VESEKTKHTCLRLEISGA----DPIFVKGTWHNSRFDISVTDGSSSWICNATEEEVAERA 73
Query: 762 SQWDQPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSP 583
+QWDQPVSEY++LAE+YLGFQQ +SVY F D +GSKRLSWTFEKEGTKLEWRWKC+ S
Sbjct: 74 AQWDQPVSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSD 133
Query: 582 NSKSITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXX 403
+SK IT GI+DFLM+ANIRLSEEVV KT+SFEK++ EAE+CL
Sbjct: 134 DSKKITVGILDFLMEANIRLSEEVVNKTRSFEKMRSEAERCLAQGEKLCDEKTEFESATY 193
Query: 402 XXFLGVLNXXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDE-TSGDEKSEEETTKR 226
FL VLN R VEEEE STDK ES++ S DEKSEEE +K+
Sbjct: 194 AKFLSVLNAKKAKLRALRDKEDSV---RVVEEEE-STDKAESFESGRSDDEKSEEEASKK 249
Query: 225 PTGT-SRGQKRISR 187
T + +RG KR +R
Sbjct: 250 ATSSKARGGKRAAR 263
>dbj|BAD43030.1| putative double strand break repair protein (XRCC4) [Arabidopsis
thaliana] gi|56461768|gb|AAV91340.1| At1g61410
[Arabidopsis thaliana] gi|61656135|gb|AAX49370.1|
At1g61410 [Arabidopsis thaliana]
Length = 248
Score = 258 bits (658), Expect = 3e-66
Identities = 137/254 (53%), Positives = 177/254 (69%), Gaps = 2/254 (0%)
Frame = -2
Query: 942 VMDDTPRHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERA 763
V + +HTCL++E+S +PIF++GTW+++RFD+++T+G +WICNA+E++V ERA
Sbjct: 2 VESEKTKHTCLRLEISGA----DPIFVKGTWHNSRFDISVTDGSSSWICNATEEEVAERA 57
Query: 762 SQWDQPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSP 583
+QWDQPVSEY++LAE+YLGFQQ +SVY F D +GSKRLSWTFEKEGTKLEWRWKC+ S
Sbjct: 58 AQWDQPVSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSD 117
Query: 582 NSKSITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXX 403
+SK IT GI+DFLM+ANIRLSEEVV KT+SFEK++ EAE+CL
Sbjct: 118 DSKKITVGILDFLMEANIRLSEEVVNKTRSFEKMRSEAERCLAQGEKLCDEKTEFESATY 177
Query: 402 XXFLGVLNXXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDE-TSGDEKSEEETTKR 226
FL VLN R VEEEE STDK ES++ S DEKSEEE +K+
Sbjct: 178 AKFLSVLNAKKAKLRALRDKEDSV---RVVEEEE-STDKAESFESGRSDDEKSEEEASKK 233
Query: 225 PTGT-SRGQKRISR 187
T + +RG KR +R
Sbjct: 234 ATSSKARGGKRAAR 247
>gb|EYU32990.1| hypothetical protein MIMGU_mgv1a012190mg [Mimulus guttatus]
Length = 259
Score = 251 bits (640), Expect = 4e-64
Identities = 131/257 (50%), Positives = 166/257 (64%), Gaps = 11/257 (4%)
Frame = -2
Query: 933 DTPRHTCLKIEVSTKSSQ-PEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERASQ 757
DTPRHTCLK+++ EP+F++GTW+ TRFDL+IT+G+ AW C+A+E++V+ERAS
Sbjct: 2 DTPRHTCLKLDIRVAGGGVAEPVFVKGTWHPTRFDLSITDGLHAWNCHATEEEVKERASS 61
Query: 756 WDQPVSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNS 577
WDQ VS+Y++LAERYLGFQQ SVYGF D G+GSKRLSWTFEKEGTKLEWRWKC+ S +
Sbjct: 62 WDQTVSDYLDLAERYLGFQQSGSVYGFSDAGNGSKRLSWTFEKEGTKLEWRWKCQPSSDC 121
Query: 576 KSITTGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXX 397
K T ++DFLMDANIRLSEEVV K QSF+ LK+EAEKCL
Sbjct: 122 KKTTAQVLDFLMDANIRLSEEVVWKMQSFDTLKLEAEKCLAQSEKLSSEKSEFESEIYGK 181
Query: 396 FLGVLN--XXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDETSGDEKSE------- 244
F+ VLN T P +EE+ STDKTES+DE + D++ +
Sbjct: 182 FVNVLNTKKAKLRELRDRLSKQGTTHHLPEDEEDQSTDKTESFDEGTDDDEDDRGKNILD 241
Query: 243 -EETTKRPTGTSRGQKR 196
+ R RG+KR
Sbjct: 242 SSKDATRSASKPRGRKR 258
>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
Length = 255
Score = 251 bits (640), Expect = 4e-64
Identities = 130/239 (54%), Positives = 162/239 (67%)
Frame = -2
Query: 924 RHTCLKIEVSTKSSQPEPIFIQGTWYSTRFDLAITNGVDAWICNASEDQVEERASQWDQP 745
RHTCLK+E+ PEPIFI+GTW+ F+L+IT+G+++W CNA+E++V RA+QWDQP
Sbjct: 7 RHTCLKLEI------PEPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRGRAAQWDQP 60
Query: 744 VSEYVELAERYLGFQQFDSVYGFVDTGDGSKRLSWTFEKEGTKLEWRWKCRLSPNSKSIT 565
VS Y++LAE++LGFQ SVY F D G+G+KRLSWTFEKEGTKLEWRWKC+ SP++K T
Sbjct: 61 VSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTKKTT 120
Query: 564 TGIMDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLXXXXXXXXXXXXXXXXXXXXFLGV 385
T I+DFLMDANIRLSEEVVRKTQSFE+LK EAEKCL FLGV
Sbjct: 121 TLILDFLMDANIRLSEEVVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAAVYAKFLGV 180
Query: 384 LNXXXXXXXXXXXXXXKTAGKRPVEEEEVSTDKTESYDETSGDEKSEEETTKRPTGTSR 208
LN K +E +DKTES+D S DEKS E+ ++ GTS+
Sbjct: 181 LNSKKRKLRELRDQLSKKEISGESAQEGEDSDKTESFDRGSDDEKSVEKPREKLAGTSK 239