BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00025415
         (547 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38872.3| unnamed protein product [Vitis vinifera]              261   8e-68
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   261   8e-68
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]   254   7e-66
gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis]     251   1e-64
ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containi...   248   5e-64
ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, part...   248   5e-64
ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily p...   248   7e-64
gb|AHB18411.1| pentatricopeptide repeat-containing protein [Goss...   247   1e-63
ref|XP_002511699.1| pentatricopeptide repeat-containing protein,...   245   6e-63
ref|XP_002320719.2| pentatricopeptide repeat-containing family p...   237   1e-60
gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pas...   234   1e-59
ref|XP_006296085.1| hypothetical protein CARUB_v10025235mg [Caps...   232   4e-59
gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionem...   232   4e-59
ref|XP_004514160.1| PREDICTED: pentatricopeptide repeat-containi...   232   5e-59
gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officin...   231   7e-59
gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]         231   7e-59
gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea ...   231   7e-59
gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium ...   231   1e-58
ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containi...   229   3e-58
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi...   229   3e-58

>emb|CBI38872.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  261 bits (667), Expect = 8e-68
 Identities = 127/182 (69%), Positives = 152/182 (83%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNGKDPFLWNAIIK 181
           RLITTGFI N  LTT+IIL FSSSS  PL+ FARY+FMSRH  R  R   +PFLWNAIIK
Sbjct: 36  RLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQDNPFLWNAIIK 95

Query: 182 SYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSGL 361
           S+SHG+DP+EAFV+F  MLE GVCVD +S SLVLKAC+RLGL+KEGMQIHGL  +++ G 
Sbjct: 96  SFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLGRMEIGS 155

Query: 362 DVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCMP 541
           DVFL+N L+ LY+RCGC+G +R++FDRM KRDSVS+NSMI+GYVK GMV SARELFD MP
Sbjct: 156 DVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMP 215

Query: 542 IK 547
           ++
Sbjct: 216 ME 217


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  261 bits (667), Expect = 8e-68
 Identities = 127/182 (69%), Positives = 152/182 (83%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNGKDPFLWNAIIK 181
           RLITTGFI N  LTT+IIL FSSSS  PL+ FARY+FMSRH  R  R   +PFLWNAIIK
Sbjct: 36  RLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQDNPFLWNAIIK 95

Query: 182 SYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSGL 361
           S+SHG+DP+EAFV+F  MLE GVCVD +S SLVLKAC+RLGL+KEGMQIHGL  +++ G 
Sbjct: 96  SFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLGRMEIGS 155

Query: 362 DVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCMP 541
           DVFL+N L+ LY+RCGC+G +R++FDRM KRDSVS+NSMI+GYVK GMV SARELFD MP
Sbjct: 156 DVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMP 215

Query: 542 IK 547
           ++
Sbjct: 216 ME 217


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score =  254 bits (650), Expect = 7e-66
 Identities = 125/182 (68%), Positives = 148/182 (81%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNGKDPFLWNAIIK 181
           RLITTGFI N  LTT+IIL FSSSS  PL+ FARY+FMSRH  R  R   +PFLWNAIIK
Sbjct: 92  RLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQDNPFLWNAIIK 151

Query: 182 SYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSGL 361
           S+SHG+DP EAF +F  MLE GVCVD +S SLVLKAC+RLGL+KEGMQIHGL   ++ G 
Sbjct: 152 SFSHGEDPXEAFXIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLGXMEIGS 211

Query: 362 DVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCMP 541
           DVFL+N L+ LY+RCGC+G +R++FDRM  RDSVS+NSMI+GYVK GMV SARELFD MP
Sbjct: 212 DVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYVKHGMVKSARELFDVMP 271

Query: 542 IK 547
           ++
Sbjct: 272 ME 273


>gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis]
          Length = 626

 Score =  251 bits (640), Expect = 1e-64
 Identities = 122/182 (67%), Positives = 146/182 (80%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNGKDPFLWNAIIK 181
           R+ITTG I N  L+ KI+LAF SS   PL  FARYVF SRHAF    N  DPFLWNA+IK
Sbjct: 33  RMITTGSINNCSLSAKIVLAFVSSPHPPLAEFARYVFFSRHAFG---NEDDPFLWNAVIK 89

Query: 182 SYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSGL 361
           SYSHG DPK+AFV+FC MLE GV VD +S SL+LKAC RLGLVKEG+QIHGL +K++ G 
Sbjct: 90  SYSHGCDPKQAFVMFCMMLENGVRVDKFSFSLILKACGRLGLVKEGLQIHGLLKKMEIGS 149

Query: 362 DVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCMP 541
           D++L+N L+  Y+RCGCV F+R+VFD M KRDSVSYNSMI+GYVK GM++ ARELFDCMP
Sbjct: 150 DLYLQNGLVSWYLRCGCVEFARQVFDGMQKRDSVSYNSMIDGYVKCGMIDLARELFDCMP 209

Query: 542 IK 547
           ++
Sbjct: 210 LE 211


>ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Citrus sinensis]
          Length = 634

 Score =  248 bits (634), Expect = 5e-64
 Identities = 122/182 (67%), Positives = 148/182 (81%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNGKDPFLWNAIIK 181
           R+ITTGFIKNT LTTK++ +FSSS  TPL  FARY+F   HAFR +   KDPFLWNAIIK
Sbjct: 36  RMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFREK---KDPFLWNAIIK 92

Query: 182 SYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSGL 361
           +YSHG DPKEA V+FC ML+ GV VD +S SLVLKAC+RLGL++EG+QIHGL RK+  G 
Sbjct: 93  TYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLRKVAFGS 152

Query: 362 DVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCMP 541
           D+FL+N LI LY+RCG + F+R++FD+M  RDSVSYNSMI+GYVK G + SARELFD MP
Sbjct: 153 DLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMP 212

Query: 542 IK 547
           I+
Sbjct: 213 IR 214



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
 Frame = +2

Query: 149 KDPFLWNAIIKSYSHGDDPKEAFVVFCSM--LEKGVCVDDYSISLVLKACARLGLVKEGM 322
           +D   +N++I  Y    + + A  +F SM   E+ +     S + VL   A+L   K G+
Sbjct: 183 RDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLI----SWNSVLNGYAQL---KSGL 235

Query: 323 QIHGLTRKLKSGLDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQG 502
           Q      +     D+   NS++   ++CG +  ++ +FD+MPKRD VS+ +MI+GY K G
Sbjct: 236 QFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLG 295

Query: 503 MVNSARELFDCMP 541
            V+ AR LFD MP
Sbjct: 296 RVDIARRLFDEMP 308



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
 Frame = +2

Query: 164 WNAIIKSYSHGDDPKE-AFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLT 340
           WN+++  Y+      + A+ +F  M E+    D  S + +L  C + G + +   +    
Sbjct: 221 WNSVLNGYAQLKSGLQFAWQIFEKMPER----DLISWNSMLHGCVKCGKMDDAQALFDKM 276

Query: 341 RKLKSGLDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSAR 520
            K     DV    ++I  Y + G V  +R +FD MPKRD V+ N+M+ GYV+ G    A 
Sbjct: 277 PKR----DVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKAL 332

Query: 521 ELFDCM 538
           E+FD M
Sbjct: 333 EIFDNM 338


>ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, partial [Citrus clementina]
           gi|557547533|gb|ESR58511.1| hypothetical protein
           CICLE_v10023562mg, partial [Citrus clementina]
          Length = 658

 Score =  248 bits (634), Expect = 5e-64
 Identities = 122/182 (67%), Positives = 148/182 (81%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNGKDPFLWNAIIK 181
           R+ITTGFIKNT LTTK++ +FSSS  TPL  FARY+F   HAFR +   KDPFLWNAIIK
Sbjct: 93  RMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFREK---KDPFLWNAIIK 149

Query: 182 SYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSGL 361
           +YSHG DPKEA V+FC ML+ GV VD +S SLVLKAC+RLGL++EG+QIHGL RK+  G 
Sbjct: 150 TYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLRKVAFGS 209

Query: 362 DVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCMP 541
           D+FL+N LI LY+RCG + F+R++FD+M  RDSVSYNSMI+GYVK G + SARELFD MP
Sbjct: 210 DLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMP 269

Query: 542 IK 547
           I+
Sbjct: 270 IR 271



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
 Frame = +2

Query: 149 KDPFLWNAIIKSYSHGDDPKEAFVVFCSM--LEKGVCVDDYSISLVLKACARLGLVKEGM 322
           +D   +N++I  Y    + + A  +F SM   E+ +     S + VL   A+L   K G+
Sbjct: 240 RDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLI----SWNSVLNGYAQL---KSGL 292

Query: 323 QIHGLTRKLKSGLDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQG 502
           Q      +     D+   NS++   ++CG +  ++ +FD+MPKRD VS+ +MI+GY K G
Sbjct: 293 QFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLG 352

Query: 503 MVNSARELFDCMP 541
            V+ AR LFD MP
Sbjct: 353 RVDIARRLFDEMP 365



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
 Frame = +2

Query: 164 WNAIIKSYSHGDDPKE-AFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLT 340
           WN+++  Y+      + A+ +F  M E+    D  S + +L  C + G + +   +    
Sbjct: 278 WNSVLNGYAQLKSGLQFAWQIFEKMPER----DLISWNSMLHGCVKCGKMDDAQALFDKM 333

Query: 341 RKLKSGLDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSAR 520
            K     DV    ++I  Y + G V  +R +FD MPKRD V+ N+M+ GYV+ G    A 
Sbjct: 334 PKR----DVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKAL 389

Query: 521 ELFDCM 538
           E+FD M
Sbjct: 390 EIFDNM 395


>ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508704332|gb|EOX96228.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 637

 Score =  248 bits (633), Expect = 7e-64
 Identities = 119/182 (65%), Positives = 147/182 (80%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNGKDPFLWNAIIK 181
           RLITTGFI++  LTTKI+LAFS S   PL+ FAR+VF + HAFR      DPFLWNA IK
Sbjct: 36  RLITTGFIRSLALTTKIVLAFSPSPFCPLVDFARHVFFTHHAFRSPEQEMDPFLWNAAIK 95

Query: 182 SYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSGL 361
           SYSHG D K+AFV+ C MLE GV  D +S+SLVLKAC+RLGL+KEGMQ+HGL RKL  G 
Sbjct: 96  SYSHGRDAKQAFVMLCLMLENGVRFDTFSLSLVLKACSRLGLMKEGMQVHGLLRKLNFGS 155

Query: 362 DVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCMP 541
           D+FL+N LI LY+RCG VG++R++FDRM +RDSVSYNSMI+GY+K GM++ ARELF+ MP
Sbjct: 156 DLFLQNCLISLYIRCGFVGYARQLFDRMCRRDSVSYNSMIDGYIKTGMIHLARELFEFMP 215

Query: 542 IK 547
           ++
Sbjct: 216 ME 217



 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 28/60 (46%), Positives = 42/60 (70%)
 Frame = +2

Query: 362 DVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCMP 541
           D+   NS+I  +++CG +  ++ +F +MPKRD VS+ +MINGY K G ++ AR LFD MP
Sbjct: 252 DLISWNSMINGFVKCGNMEDAQALFVKMPKRDVVSWANMINGYAKVGKIDLARRLFDEMP 311


>gb|AHB18411.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 637

 Score =  247 bits (631), Expect = 1e-63
 Identities = 115/182 (63%), Positives = 149/182 (81%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNGKDPFLWNAIIK 181
           RLITTGFI++ VLTTKI+L FS S  TPL+ FARYVF +  AFR  +  +DPFLWNA+IK
Sbjct: 36  RLITTGFIRSQVLTTKIVLTFSPSPFTPLVDFARYVFFTYLAFRSPKQDEDPFLWNAVIK 95

Query: 182 SYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSGL 361
           SYSHG + +EAF++ C MLE GV  D +S+SLVLKAC++LGL+KEGMQ+HGL RKL  G 
Sbjct: 96  SYSHGREAQEAFIILCLMLENGVPFDKFSLSLVLKACSQLGLLKEGMQVHGLLRKLNFGS 155

Query: 362 DVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCMP 541
           D+FL+N LI  Y+RCG +G++R++FDRM  RDSVSYNSMI+GY+K+GM++ A+ELFD MP
Sbjct: 156 DLFLQNCLISYYLRCGFIGYARQLFDRMSMRDSVSYNSMIDGYIKRGMIDLAKELFDVMP 215

Query: 542 IK 547
           ++
Sbjct: 216 LE 217



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = +2

Query: 308 VKEGMQIH-GLTRKLKSGLDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMIN 484
           +K+GM +  GL  K+    D+   NS+I  +++CG +  ++ +FD+MP+RD VS+ +MIN
Sbjct: 234 LKDGMGLALGLFEKMPDR-DLISWNSMINGFVKCGNMEDAQILFDKMPRRDVVSWANMIN 292

Query: 485 GYVKQGMVNSARELFDCM 538
           GY K G ++ AR LF+ M
Sbjct: 293 GYAKVGKIDLARSLFNEM 310


>ref|XP_002511699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548879|gb|EEF50368.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 474

 Score =  245 bits (625), Expect = 6e-63
 Identities = 120/182 (65%), Positives = 147/182 (80%), Gaps = 1/182 (0%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNGK-DPFLWNAII 178
           R+ITTGFIKNT LTTKIIL+ SSS    L  FARY F +RHA+      K DPFLWNA+I
Sbjct: 37  RMITTGFIKNTSLTTKIILSLSSSPNVALHEFARYFFFTRHAYIIGAQEKEDPFLWNAVI 96

Query: 179 KSYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSG 358
           K++SHG+DPK+A ++F  ML+ GV VD +S+SLVLKAC+RLGLVKEGMQIHGL RKLK G
Sbjct: 97  KTHSHGNDPKQALIIFSLMLQNGVFVDKFSVSLVLKACSRLGLVKEGMQIHGLLRKLKFG 156

Query: 359 LDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCM 538
            DVFL+N LIGLY++C C+ ++R+VFD+MP RDSVSYNSMI GYVK G ++ AR+L+D M
Sbjct: 157 SDVFLQNCLIGLYVKCRCIDYARQVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVM 216

Query: 539 PI 544
           PI
Sbjct: 217 PI 218



 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
 Frame = +2

Query: 149 KDPFLWNAIIKSYSHGDDPKEAFVVFCSML-EKGVCVDDYSISLVLKACARLGLVKEGMQ 325
           +D    NA++  Y       EA  +F  M  E  +C D+ ++ +VL A A+LG +++G++
Sbjct: 315 RDVVACNAMMSGYVQNGYCMEALGIFHDMQRESNLCPDNATLLIVLSAIAQLGHIEKGVE 374

Query: 326 IHGLTRKLKSGLDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGM 505
           IH   ++    L+  L  +LI +Y +CG    +  VF+ +  + +  +N+MING    GM
Sbjct: 375 IHCYIQENGFSLEEKLGVALIDMYSKCGSAENAMLVFEGIKGKTADHWNAMINGLAIHGM 434


>ref|XP_002320719.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550323642|gb|EEE99034.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 643

 Score =  237 bits (605), Expect = 1e-60
 Identities = 116/186 (62%), Positives = 144/186 (77%), Gaps = 4/186 (2%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRC----RRNGKDPFLWN 169
           RL+TTGFIKNT LTTKIIL+FS+S   PLI FAR++F   HAF          KDPFLWN
Sbjct: 37  RLLTTGFIKNTFLTTKIILSFSTSLHAPLIEFARFIFFRHHAFEFDEKEEEEEKDPFLWN 96

Query: 170 AIIKSYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKL 349
           AIIK+YSHG DPKEA  +   MLE G   D +++SLVLKAC+R+GLVKEGMQIHGL +KL
Sbjct: 97  AIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKACSRVGLVKEGMQIHGLLKKL 156

Query: 350 KSGLDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELF 529
           + G D+FL+N LI  Y++CGC+  + +VFDRMPKRDSVSYNSMI+GYVK G ++ AR +F
Sbjct: 157 EFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVF 216

Query: 530 DCMPIK 547
           DC+P++
Sbjct: 217 DCIPLE 222



 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = +2

Query: 149 KDPFLWNAIIKSYSHGDDPKEAFVVF-CSMLEKGVCVDDYSISLVLKACARLGLVKEGMQ 325
           +D   +N++I  Y  G     A VVF C  LE+   +   S + +++  A+    ++G+ 
Sbjct: 191 RDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLI---SWNSLIRGYAQS---EDGIL 244

Query: 326 IHGLTRKLKSGLDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGM 505
           +           D+   NS+I   ++CG +  ++ +FDRMP RD VS+ +MI+GY K G 
Sbjct: 245 VAWQLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGR 304

Query: 506 VNSARELFDCMP 541
           V+ AR LFD MP
Sbjct: 305 VDIARSLFDEMP 316



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
 Frame = +2

Query: 164 WNAIIKSYSHGDDP-KEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLT 340
           WN++I+ Y+  +D    A+ +F  M E+    D  S + ++  C + G +++     GL 
Sbjct: 229 WNSLIRGYAQSEDGILVAWQLFAKMPER----DLISWNSMIDGCVKCGRMEDAQ---GLF 281

Query: 341 RKLKSGLDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSAR 520
            ++ +  D+    ++I  Y + G V  +R +FD MP+RD V+YN+M+ GYV+ G    A 
Sbjct: 282 DRMPNR-DIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEAL 340

Query: 521 ELF 529
            +F
Sbjct: 341 GIF 343


>gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
          Length = 617

 Score =  234 bits (596), Expect = 1e-59
 Identities = 113/182 (62%), Positives = 144/182 (79%), Gaps = 2/182 (1%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNGK--DPFLWNAI 175
           RLITTG IKN+ L+T+I+LAF++S    L  FAR VF   H       G+  DPFLWNA+
Sbjct: 37  RLITTGLIKNSNLSTRIVLAFAASPRPYLAEFARLVFREYHVCSSSPGGEVEDPFLWNAV 96

Query: 176 IKSYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKS 355
           IKS+SHG DPK+A ++FC MLE GV VD +S+SLVLKAC+RLG VK G+QIHG+ RK   
Sbjct: 97  IKSHSHGKDPKQALLLFCLMLENGVSVDKFSMSLVLKACSRLGFVKGGLQIHGILRKTGL 156

Query: 356 GLDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDC 535
             D+FL+N LIGLY++CGC+GF+R++FDRMP+RDSVS+NSMI+GYVK+G++ SARELFD 
Sbjct: 157 CSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKRGLIESARELFDL 216

Query: 536 MP 541
           MP
Sbjct: 217 MP 218



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/60 (43%), Positives = 42/60 (70%)
 Frame = +2

Query: 362 DVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCMP 541
           D+   NS+I  Y++ G +  ++++FD MP+RD V++ +MI+GY K G V+ A+ LFD MP
Sbjct: 255 DLISWNSMIDGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMP 314


>ref|XP_006296085.1| hypothetical protein CARUB_v10025235mg [Capsella rubella]
           gi|482564793|gb|EOA28983.1| hypothetical protein
           CARUB_v10025235mg [Capsella rubella]
          Length = 607

 Score =  232 bits (592), Expect = 4e-59
 Identities = 114/182 (62%), Positives = 141/182 (77%), Gaps = 2/182 (1%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNG--KDPFLWNAI 175
           RLITTG IKN+ L+T+I+LAF++S    L  FAR VF   H       G  KDPFLWNA+
Sbjct: 27  RLITTGLIKNSNLSTRIVLAFAASPRPFLAEFARLVFREYHVCASSPGGEVKDPFLWNAV 86

Query: 176 IKSYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKS 355
           IKS+SHG DPK+A ++FC MLE GV VD++S+SLVLKAC+RLG VK G+QIHG  RK   
Sbjct: 87  IKSHSHGKDPKQALLLFCLMLENGVSVDEFSMSLVLKACSRLGFVKGGLQIHGFLRKTGL 146

Query: 356 GLDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDC 535
             D+FL N LIGLY++CGC+GF+R++FDRMP+RDSVS+NSMI+GYVK G + SARELFD 
Sbjct: 147 WSDLFLHNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKCGSIESARELFDL 206

Query: 536 MP 541
           MP
Sbjct: 207 MP 208



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 27/60 (45%), Positives = 41/60 (68%)
 Frame = +2

Query: 362 DVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCMP 541
           D+   NS+I  Y++ G +  ++E+FD MP RD V++ +MI+GY K G V+ A+ LFD MP
Sbjct: 245 DLISWNSMIDGYVKHGRIEDAKELFDVMPSRDVVTWATMIDGYAKLGFVHQAKTLFDQMP 304


>gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionema cordifolium]
          Length = 587

 Score =  232 bits (592), Expect = 4e-59
 Identities = 114/181 (62%), Positives = 142/181 (78%), Gaps = 1/181 (0%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNG-KDPFLWNAII 178
           RLI TGFI+N+ LTT+I+LAF++S    L  FAR VF + H+        +DPFLWNA+I
Sbjct: 12  RLIKTGFIQNSNLTTRIVLAFAASRRPYLAEFARCVFQNYHSCSFAHGEVEDPFLWNAVI 71

Query: 179 KSYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSG 358
           KS+SHG DPK A + FC MLE GV VD +S+SLVLKAC+RLG V+EGMQIHG  RK    
Sbjct: 72  KSHSHGVDPKRALIWFCLMLENGVSVDKFSLSLVLKACSRLGFVQEGMQIHGFLRKTGIW 131

Query: 359 LDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCM 538
            D+FL+N LIGLY++CGC+GF+R++FDRMP+RDSVSYNSMI+GYVK G++ SARELFD M
Sbjct: 132 SDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLM 191

Query: 539 P 541
           P
Sbjct: 192 P 192


>ref|XP_004514160.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cicer arietinum]
          Length = 630

 Score =  232 bits (591), Expect = 5e-59
 Identities = 115/183 (62%), Positives = 139/183 (75%), Gaps = 1/183 (0%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNG-KDPFLWNAII 178
           RLITTGFIK+T LTTK+IL F SS   PLI FARY+F   HAFR   +  +DPFLWNA+I
Sbjct: 38  RLITTGFIKSTSLTTKLILTFVSSPNKPLIEFARYIFFKNHAFRVSNDKYEDPFLWNAVI 97

Query: 179 KSYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSG 358
           +SYSHG DPK A  + C M+E G  +D Y+ SL LKAC+ LGL++EGMQIHGL  K   G
Sbjct: 98  RSYSHGSDPKGALFLLCLMIENGFFLDKYTFSLALKACSMLGLMREGMQIHGLLCKTDFG 157

Query: 359 LDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCM 538
            DVFL+N LIGL+MRCGCV F+++VFDR+ +RDSVSYNSMI+GYVK G++  A ELF  M
Sbjct: 158 CDVFLQNCLIGLFMRCGCVDFAKQVFDRISERDSVSYNSMIDGYVKCGLIGRACELFHGM 217

Query: 539 PIK 547
            IK
Sbjct: 218 EIK 220


>gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
          Length = 614

 Score =  231 bits (590), Expect = 7e-59
 Identities = 113/181 (62%), Positives = 138/181 (76%), Gaps = 1/181 (0%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNG-KDPFLWNAII 178
           RLITTGFIKN+ LTTKI++AF+ S    L  FARYVF   H         KDPFLWN +I
Sbjct: 35  RLITTGFIKNSNLTTKIVVAFADSRRPYLAEFARYVFREYHVCSFAPGDVKDPFLWNLVI 94

Query: 179 KSYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSG 358
           KS+SHG DP+ A + FC MLE G+ VD +S SLVLKAC+RLG +K GMQIHG  RK    
Sbjct: 95  KSHSHGVDPRRALLWFCLMLENGISVDKFSFSLVLKACSRLGFLKGGMQIHGFLRKTGIW 154

Query: 359 LDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCM 538
            D+FL+N LIGLY++CGC+GF+R++FDRMP+RDSVSYNSMI+GY+K G++ SARELFD M
Sbjct: 155 SDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYIKCGLIESARELFDLM 214

Query: 539 P 541
           P
Sbjct: 215 P 215


>gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
          Length = 612

 Score =  231 bits (590), Expect = 7e-59
 Identities = 115/182 (63%), Positives = 143/182 (78%), Gaps = 2/182 (1%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNG--KDPFLWNAI 175
           RLIT GFIKN  LTT+I+L F+ S  + L  FAR+VF   H +    NG  +DPFLWNA+
Sbjct: 36  RLITNGFIKNPNLTTRIVLDFADSRRSYLAEFARFVF---HEYHVCSNGDFEDPFLWNAV 92

Query: 176 IKSYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKS 355
           IKS+SHG DP++A ++FC MLE GV VD +S+SLVLKAC+RLG VKEGMQIHG  RK   
Sbjct: 93  IKSHSHGLDPRKALLLFCLMLETGVSVDKFSLSLVLKACSRLGFVKEGMQIHGFLRKTGI 152

Query: 356 GLDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDC 535
             D++L+N LIGLY++CGC+G++R+VFDRMP+RDSVSYNSMI+GYVK GM+ SAR LFD 
Sbjct: 153 WSDLYLQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNSMIDGYVKCGMIESARGLFDL 212

Query: 536 MP 541
           MP
Sbjct: 213 MP 214



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/62 (41%), Positives = 44/62 (70%)
 Frame = +2

Query: 362 DVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCMP 541
           D+   NSLI  Y++ G +  ++ +F++MPKRD V++ +M++GY K G V+ A+ LFD MP
Sbjct: 251 DLISWNSLIDGYVKHGRMEDAKSLFNKMPKRDVVTWATMVDGYAKLGFVHQAKSLFDRMP 310

Query: 542 IK 547
           ++
Sbjct: 311 LR 312


>gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
          Length = 588

 Score =  231 bits (590), Expect = 7e-59
 Identities = 114/181 (62%), Positives = 141/181 (77%), Gaps = 1/181 (0%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNG-KDPFLWNAII 178
           RLI TGFI N+ LTT+I+LAF++S    L  FAR VF + H+        +DPFLWNA+I
Sbjct: 9   RLIKTGFIXNSNLTTRIVLAFAASRRPYLAEFARCVFQNYHSCSFAHGEVEDPFLWNAVI 68

Query: 179 KSYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSG 358
           KS+SHG DPK A + FC MLE GV VD +S+SLVLKAC+RLG V+EGMQIHG  RK    
Sbjct: 69  KSHSHGVDPKRALIWFCLMLENGVSVDKFSLSLVLKACSRLGFVQEGMQIHGFLRKTGIW 128

Query: 359 LDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCM 538
            D+FL+N LIGLY++CGC+GF+R++FDRMP+RDSVSYNSMI+GYVK G++ SARELFD M
Sbjct: 129 SDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLM 188

Query: 539 P 541
           P
Sbjct: 189 P 189


>gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium sativum]
          Length = 597

 Score =  231 bits (588), Expect = 1e-58
 Identities = 114/181 (62%), Positives = 139/181 (76%), Gaps = 1/181 (0%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNG-KDPFLWNAII 178
           RLITTG IKN+ LTT+I+LAF+SS    L  FAR VF   H +       +DPFLWNA+I
Sbjct: 18  RLITTGVIKNSNLTTRIVLAFASSRRQYLAEFARCVFEEHHVYSLPYGETEDPFLWNAVI 77

Query: 179 KSYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSG 358
           KS+SHG DP+ +  +FC MLE GV VD +S+SLVLKAC+RLG VK GM IHG  RK    
Sbjct: 78  KSHSHGTDPRRSLFLFCLMLENGVSVDKFSLSLVLKACSRLGFVKAGMXIHGFLRKTGLW 137

Query: 359 LDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCM 538
            D+FL+N LIGLY++CGC+G+SR+VFDRMP+RDSVSYNSMI+GYVK G++ SARELFD M
Sbjct: 138 SDLFLQNCLIGLYLKCGCLGYSRQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLM 197

Query: 539 P 541
           P
Sbjct: 198 P 198


>ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Solanum tuberosum]
          Length = 625

 Score =  229 bits (585), Expect = 3e-58
 Identities = 112/182 (61%), Positives = 140/182 (76%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAFRCRRNGKDPFLWNAIIK 181
           +LITTG +KN  LTTK+IL  SSS  TP++ FAR++F S      +RN KDPFLWN I+K
Sbjct: 36  QLITTGLVKNPFLTTKLILKLSSSPHTPIVEFARFLFFSDDFCCSKRNKKDPFLWNVIMK 95

Query: 182 SYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLKSGL 361
           S+SHG+DP +AF VFC MLE GV VD+YS+S+VLKAC+R+G VK GMQ+HGL RK+  G 
Sbjct: 96  SFSHGNDPYKAFQVFCLMLENGVFVDEYSLSIVLKACSRMGFVKRGMQVHGLLRKIGFGS 155

Query: 362 DVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCMP 541
           DVFL+N LI +Y+RCG V +   VFDRM  RDSVSYN+MI+GYVK GM++ A  LFD MP
Sbjct: 156 DVFLQNCLISMYVRCGFVEYGHHVFDRMCLRDSVSYNTMIDGYVKCGMLDVACRLFDFMP 215

Query: 542 IK 547
           I+
Sbjct: 216 IE 217


>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
           gi|449480068|ref|XP_004155790.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
          Length = 638

 Score =  229 bits (584), Expect = 3e-58
 Identities = 115/185 (62%), Positives = 144/185 (77%), Gaps = 3/185 (1%)
 Frame = +2

Query: 2   RLITTGFIKNTVLTTKIILAFSSSSLTPLIRFARYVFMSRHAF-RCRRN--GKDPFLWNA 172
           R+I TG++KN+ LTTKIIL   SS   PL+ FARYVF +R+A  R RRN    DPFLWNA
Sbjct: 36  RIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYVFFTRYAVQRIRRNHLDDDPFLWNA 95

Query: 173 IIKSYSHGDDPKEAFVVFCSMLEKGVCVDDYSISLVLKACARLGLVKEGMQIHGLTRKLK 352
           +IKSYSHG++P  A V+FC MLE G CVD +S SL+LKACAR+ LV+EG QIHGL  KL+
Sbjct: 96  VIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLE 155

Query: 353 SGLDVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFD 532
            G ++FL N LI +Y+RCG + F+R+VFDRMP +DSVSYNSMI+GYVK G ++ ARELFD
Sbjct: 156 IGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFD 215

Query: 533 CMPIK 547
            MP++
Sbjct: 216 SMPLE 220



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/62 (46%), Positives = 44/62 (70%)
 Frame = +2

Query: 362 DVFLENSLIGLYMRCGCVGFSREVFDRMPKRDSVSYNSMINGYVKQGMVNSARELFDCMP 541
           D+   N++IG + +CG + F+  +F+RMPKRD +S+++MI+GY K G +  AR LFD MP
Sbjct: 255 DLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMP 314

Query: 542 IK 547
            K
Sbjct: 315 DK 316