BLASTX nr result
ID: Paeonia24_contig00025374
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00025374
(723 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi... 366 5e-99
ref|XP_006447757.1| hypothetical protein CICLE_v10014482mg [Citr... 361 2e-97
gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis] 347 2e-93
ref|XP_007049307.1| Pentatricopeptide repeat superfamily protein... 344 2e-92
ref|XP_002531691.1| pentatricopeptide repeat-containing protein,... 342 8e-92
ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containi... 319 5e-85
ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containi... 309 5e-82
ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutr... 308 2e-81
emb|CBI28420.3| unnamed protein product [Vitis vinifera] 303 3e-80
ref|XP_004295356.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 298 1e-78
ref|XP_007215365.1| hypothetical protein PRUPE_ppa005588mg [Prun... 290 3e-76
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi... 229 9e-58
ref|XP_002320719.2| pentatricopeptide repeat-containing family p... 226 5e-57
ref|XP_006420414.1| hypothetical protein CICLE_v10006642mg [Citr... 221 1e-55
ref|XP_007215675.1| hypothetical protein PRUPE_ppa003946mg [Prun... 221 2e-55
ref|XP_006493995.1| PREDICTED: pentatricopeptide repeat-containi... 221 3e-55
ref|XP_007156271.1| hypothetical protein PHAVU_003G272400g [Phas... 220 3e-55
ref|XP_007050341.1| Basic helix-loop-helix DNA-binding superfami... 220 3e-55
emb|CBI22243.3| unnamed protein product [Vitis vinifera] 220 3e-55
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi... 220 3e-55
>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 366 bits (939), Expect = 5e-99
Identities = 173/241 (71%), Positives = 206/241 (85%)
Frame = -1
Query: 723 IFIWNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPN 544
+ +WNSL+ Y++C ++ A +LF+EMPERD FSWTVLVDG SKCGKV++AR++FD+MP
Sbjct: 178 VVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPC 237
Query: 543 RNLVSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKM 364
RNLVSWNAMI+GYMKSGDFDSAL+LF QMP D +TWN MIAGYELNGQFM+A++ F+ M
Sbjct: 238 RNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMM 297
Query: 363 LEAGRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSI 184
L+ G P+ AT+VS LSAVSGLA+L KGRWIHSY+ K GFELDG+LGT LIEMY KCG I
Sbjct: 298 LKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCI 357
Query: 183 ESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNAC 4
ESA TVFRAI KKK+GHWTA+IVGLG+HGMA HA+ LF EMC+ GLKPNAI FIGVLNAC
Sbjct: 358 ESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNAC 417
Query: 3 S 1
+
Sbjct: 418 N 418
Score = 74.3 bits (181), Expect = 4e-11
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 7/245 (2%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPER---DLFSWTVLVDGFSKCGKVDAAREIFDKMPN 544
WN+++ Y + + D LF E+ D F+ ++ G ++ G V ++I
Sbjct: 81 WNTIIKCYVENQFSHDGIVLFHELVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALK 140
Query: 543 RNLVS----WNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEW 376
S ++++ Y K G+ D A ++F+ M +D + WNS+I GY G+ AL+
Sbjct: 141 IGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQL 200
Query: 375 FWKMLEAGRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTK 196
F +M E S V GL+ K +M + V +I Y K
Sbjct: 201 FEEMPERDAF-------SWTVLVDGLSKCGKVESARKLFDQMPCR-NLVSWNAMINGYMK 252
Query: 195 CGSIESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGV 16
G +SA +F + L W +I G ++G A+++F M ++G +P+ T + V
Sbjct: 253 SGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSV 312
Query: 15 LNACS 1
L+A S
Sbjct: 313 LSAVS 317
Score = 71.2 bits (173), Expect = 3e-10
Identities = 43/147 (29%), Positives = 75/147 (51%)
Frame = -1
Query: 501 KSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVS 322
K D A +F+++ R I WN++I Y N + + F +++ LP+ T+
Sbjct: 59 KINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHE-YLPDNFTLPC 117
Query: 321 ALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKK 142
+ + L ++ +G+ IH K+GF D + L+ MY+KCG I+ A+ VF + K
Sbjct: 118 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 177
Query: 141 LGHWTAVIVGLGVHGMAYHAIELFQEM 61
+ W ++I G G A++LF+EM
Sbjct: 178 VVLWNSLIDGYARCGEIDIALQLFEEM 204
>ref|XP_006447757.1| hypothetical protein CICLE_v10014482mg [Citrus clementina]
gi|568830445|ref|XP_006469509.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Citrus sinensis]
gi|557550368|gb|ESR60997.1| hypothetical protein
CICLE_v10014482mg [Citrus clementina]
Length = 689
Score = 361 bits (926), Expect = 2e-97
Identities = 177/238 (74%), Positives = 203/238 (85%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPNRNL 535
WN L+ Y K ++ A KLFDEMPERDLFSWT LVDGFSKCGKV+ AREIF +MPNRNL
Sbjct: 191 WNCLIDGYVKKGEVEVAMKLFDEMPERDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNL 250
Query: 534 VSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEA 355
VSWNAMI+GYMK+GD DSA +LFN M RD ITWNSMIAGYELNG+FMEALE+F ML
Sbjct: 251 VSWNAMINGYMKAGDVDSACELFNDMEIRDLITWNSMIAGYELNGRFMEALEFFETMLRG 310
Query: 354 GRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESA 175
LPN AT+VSALSAV+GLA+L KGRW+HSYI K GF +DGVLGT+LI+MY+KCGSIESA
Sbjct: 311 DVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESA 370
Query: 174 QTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNACS 1
TVFRAISKKK+GHWTA+IVGLG+HGMA A+ LF +MC++G+KP AITFIGVLNACS
Sbjct: 371 LTVFRAISKKKVGHWTAMIVGLGMHGMATQALYLFNKMCRMGMKPIAITFIGVLNACS 428
Score = 101 bits (252), Expect = 2e-19
Identities = 60/209 (28%), Positives = 105/209 (50%)
Frame = -1
Query: 633 DLFSWTVLVDGFSKCGKVDAAREIFDKMPNRNLVSWNAMIDGYMKSGDFDSALQLFNQMP 454
D F + LV ++K G++D R +FD + +++LVSWN +IDGY+K G+ + A++LF++MP
Sbjct: 156 DKFVLSSLVSMYAKFGEIDLGRRVFDVLDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMP 215
Query: 453 ARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSGLAILIKGRW 274
RD +W ++ G+ G+ A E F+ R+PN+ +VS + ++G
Sbjct: 216 ERDLFSWTCLVDGFSKCGKVEIAREIFY------RMPNR-NLVSWNAMING--------- 259
Query: 273 IHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKLGHWTAVIVGLGVHGM 94
Y K G ++SA +F + + L W ++I G ++G
Sbjct: 260 -----------------------YMKAGDVDSACELFNDMEIRDLITWNSMIAGYELNGR 296
Query: 93 AYHAIELFQEMCQIGLKPNAITFIGVLNA 7
A+E F+ M + + PN T + L+A
Sbjct: 297 FMEALEFFETMLRGDVLPNDATLVSALSA 325
Score = 67.4 bits (163), Expect = 5e-09
Identities = 39/127 (30%), Positives = 62/127 (48%)
Frame = -1
Query: 441 ITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSGLAILIKGRWIHSY 262
+ +N +I Y N + EAL F +L LP+ T+ + + L + +G+ IH
Sbjct: 88 VLYNLLIKCYVFNQRSHEALTLFCDLLHRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGL 147
Query: 261 ITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHA 82
+ K+GF D + + L+ MY K G I+ + VF + K L W +I G G A
Sbjct: 148 VFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDVLDDKDLVSWNCLIDGYVKKGEVEVA 207
Query: 81 IELFQEM 61
++LF EM
Sbjct: 208 MKLFDEM 214
>gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis]
Length = 686
Score = 347 bits (890), Expect = 2e-93
Identities = 164/241 (68%), Positives = 201/241 (83%)
Frame = -1
Query: 723 IFIWNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPN 544
+ +WN L+ Y++C ++ A +LFDEMPERD FSWT LVDGFSKCG+V+ AR++FD+MP+
Sbjct: 185 LVLWNCLIDGYARCGEVEIALQLFDEMPERDYFSWTCLVDGFSKCGRVEMARDVFDRMPS 244
Query: 543 RNLVSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKM 364
RNLVSWNAMI+GYMKSGD + A +LF++MP RD ITWNSMIAGYE NG+FMEAL F M
Sbjct: 245 RNLVSWNAMINGYMKSGDVEMARRLFDEMPTRDVITWNSMIAGYEFNGKFMEALYLFIAM 304
Query: 363 LEAGRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSI 184
L+ G +PN T V ALSAVSGLA+L KG+WIHS + K G E +GVLGT LIEMY+KCGS+
Sbjct: 305 LKEGLVPNHTTFVGALSAVSGLAVLSKGKWIHSLMVKCGIESEGVLGTSLIEMYSKCGSV 364
Query: 183 ESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNAC 4
ESA +VFRAISKKKLGHWTA+IVGLG+HGMA A+E+F EM + GL+P+AITF+GVLNAC
Sbjct: 365 ESALSVFRAISKKKLGHWTAIIVGLGMHGMAERALEMFSEMRRTGLQPHAITFLGVLNAC 424
Query: 3 S 1
S
Sbjct: 425 S 425
Score = 77.4 bits (189), Expect = 5e-12
Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 13/251 (5%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPER---DLFSWTVLVDGFSKCGKVDAAREI------ 562
WN L+ Y + ++ DA LF ++ D F+ ++ G ++ V ++I
Sbjct: 88 WNILIKCYVENQRSHDAICLFHDLVHEFTPDCFTLPSVIKGCARLNAVPEGKQIHGLVVK 147
Query: 561 ----FDKMPNRNLVSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQF 394
DK +LVS Y + G+ A ++F+QM +D + WN +I GY G+
Sbjct: 148 IGFGLDKFVQSSLVSM------YSRCGEMGYARKVFDQMGEKDLVLWNCLIDGYARCGEV 201
Query: 393 MEALEWFWKMLEAGRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVL 214
AL+ F +M E S V G + + +M + V +
Sbjct: 202 EIALQLFDEMPE-------RDYFSWTCLVDGFSKCGRVEMARDVFDRMP-SRNLVSWNAM 253
Query: 213 IEMYTKCGSIESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNA 34
I Y K G +E A+ +F + + + W ++I G +G A+ LF M + GL PN
Sbjct: 254 INGYMKSGDVEMARRLFDEMPTRDVITWNSMIAGYEFNGKFMEALYLFIAMLKEGLVPNH 313
Query: 33 ITFIGVLNACS 1
TF+G L+A S
Sbjct: 314 TTFVGALSAVS 324
Score = 74.3 bits (181), Expect = 4e-11
Identities = 44/147 (29%), Positives = 76/147 (51%)
Frame = -1
Query: 501 KSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVS 322
K D A +F+ +P D ++WN +I Y N + +A+ F ++ P+ T+ S
Sbjct: 66 KINSLDYARSVFDLIPVPDLVSWNILIKCYVENQRSHDAICLFHDLVHEFT-PDCFTLPS 124
Query: 321 ALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKK 142
+ + L + +G+ IH + K+GF LD + + L+ MY++CG + A+ VF + +K
Sbjct: 125 VIKGCARLNAVPEGKQIHGLVVKIGFGLDKFVQSSLVSMYSRCGEMGYARKVFDQMGEKD 184
Query: 141 LGHWTAVIVGLGVHGMAYHAIELFQEM 61
L W +I G G A++LF EM
Sbjct: 185 LVLWNCLIDGYARCGEVEIALQLFDEM 211
>ref|XP_007049307.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508701568|gb|EOX93464.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 682
Score = 344 bits (882), Expect = 2e-92
Identities = 164/241 (68%), Positives = 200/241 (82%)
Frame = -1
Query: 723 IFIWNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPN 544
+ +WNSLL Y++C ++ A K F+EMPERD FSWTVL+DG +KCG+V+ AREIF+KMPN
Sbjct: 181 LVLWNSLLDGYARCGEVKVAMKAFEEMPERDCFSWTVLIDGLAKCGEVETAREIFEKMPN 240
Query: 543 RNLVSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKM 364
RNLVSWN MI+GYMK+GD +SA +LFN+MP R+ ITWNS+I G ELN F+EALE F +M
Sbjct: 241 RNLVSWNTMINGYMKAGDINSACKLFNRMPKRNLITWNSIIGGLELNLHFVEALEMFKRM 300
Query: 363 LEAGRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSI 184
L+ P+ AT+VS +SAVSGLA L KGR +HSYI K G ELDGV+GTVLIEMY+KCGSI
Sbjct: 301 LKEEFRPSHATLVSVISAVSGLASLGKGRSMHSYIVKNGIELDGVVGTVLIEMYSKCGSI 360
Query: 183 ESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNAC 4
+SA T+FR IS KKLGHWTA+IVGL +HGMA HA+E F EMC+IG+KPNAITF+GVLNAC
Sbjct: 361 DSALTIFRTISNKKLGHWTAIIVGLSIHGMAEHALEFFLEMCRIGVKPNAITFVGVLNAC 420
Query: 3 S 1
S
Sbjct: 421 S 421
Score = 84.0 bits (206), Expect = 5e-14
Identities = 65/265 (24%), Positives = 112/265 (42%), Gaps = 48/265 (18%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKM----- 550
WN+++ Y K ++ A KLF+ MP+R+L +W ++ G A E+F +M
Sbjct: 246 WNTMINGYMKAGDINSACKLFNRMPKRNLITWNSIIGGLELNLHFVEALEMFKRMLKEEF 305
Query: 549 ---------------------PNRNLVSW-------------NAMIDGYMKSGDFDSALQ 472
R++ S+ +I+ Y K G DSAL
Sbjct: 306 RPSHATLVSVISAVSGLASLGKGRSMHSYIVKNGIELDGVVGTVLIEMYSKCGSIDSALT 365
Query: 471 LFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSGLAI 292
+F + + W ++I G ++G ALE+F +M G PN T V L+A S +
Sbjct: 366 IFRTISNKKLGHWTAIIVGLSIHGMAEHALEFFLEMCRIGVKPNAITFVGVLNACSHAGL 425
Query: 291 LIKGR-WIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKK-KLGHWTAVI 118
+ GR + ++ I + G + L++M + G +E A+ + + ++ W ++
Sbjct: 426 INDGRGYFNTMINEYGIKPTIEHYGCLVDMLCRAGDLEEAKNIIEEMPRRANKVIWMTLL 485
Query: 117 VGLGVHG-------MAYHAIELFQE 64
G HG A+H IEL E
Sbjct: 486 SGARNHGNTKIGEYAAHHLIELAPE 510
Score = 78.6 bits (192), Expect = 2e-12
Identities = 61/248 (24%), Positives = 116/248 (46%), Gaps = 7/248 (2%)
Frame = -1
Query: 723 IFIWNSLLFMYSKCRQLSDAAKLFDEMPER---DLFSWTVLVDGFSKCGKVDAAREIFDK 553
+ +WN ++ Y + +Q +A LF ++ D F++ ++ G +K V+ ++I
Sbjct: 81 LILWNIIIKCYVENQQSHEAIFLFAQLLHHFPPDEFTFPCVIKGCAKLNAVNEGKQIHGL 140
Query: 552 MPNRNL----VSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEA 385
+ + ++++ Y K G+ SA ++F+ M +D + WNS++ GY G+ A
Sbjct: 141 VLKLGFGLDKFTQGSLVNLYSKCGEIASAHKVFDVMGEKDLVLWNSLLDGYARCGEVKVA 200
Query: 384 LEWFWKMLEAGRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEM 205
++ F +M E S + GLA + KM + V +I
Sbjct: 201 MKAFEEMPE-------RDCFSWTVLIDGLAKCGEVETAREIFEKMP-NRNLVSWNTMING 252
Query: 204 YTKCGSIESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITF 25
Y K G I SA +F + K+ L W ++I GL ++ A+E+F+ M + +P+ T
Sbjct: 253 YMKAGDINSACKLFNRMPKRNLITWNSIIGGLELNLHFVEALEMFKRMLKEEFRPSHATL 312
Query: 24 IGVLNACS 1
+ V++A S
Sbjct: 313 VSVISAVS 320
Score = 70.1 bits (170), Expect = 7e-10
Identities = 44/140 (31%), Positives = 71/140 (50%)
Frame = -1
Query: 480 ALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSG 301
A +F+Q+ I WN +I Y N Q EA+ F ++L P++ T + +
Sbjct: 69 ARSVFDQIQLPTLILWNIIIKCYVENQQSHEAIFLFAQLLHHFP-PDEFTFPCVIKGCAK 127
Query: 300 LAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKLGHWTAV 121
L + +G+ IH + K+GF LD L+ +Y+KCG I SA VF + +K L W ++
Sbjct: 128 LNAVNEGKQIHGLVLKLGFGLDKFTQGSLVNLYSKCGEIASAHKVFDVMGEKDLVLWNSL 187
Query: 120 IVGLGVHGMAYHAIELFQEM 61
+ G G A++ F+EM
Sbjct: 188 LDGYARCGEVKVAMKAFEEM 207
>ref|XP_002531691.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528667|gb|EEF30682.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 434
Score = 342 bits (877), Expect = 8e-92
Identities = 162/238 (68%), Positives = 198/238 (83%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPNRNL 535
WNSL+ Y KC Q+ KLF+EMPERDLFSWTVL+DGFSKCGKVD ARE+FDKMP+RNL
Sbjct: 176 WNSLIDGYVKCGQVELGMKLFEEMPERDLFSWTVLIDGFSKCGKVDVARELFDKMPSRNL 235
Query: 534 VSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEA 355
VSWNAMI+GYMK+GDF A +LF++MP ++ I+WNSM+AGY+LN +F EAL+ F MLE
Sbjct: 236 VSWNAMINGYMKAGDFVLASELFDKMPEKNLISWNSMVAGYDLNERFKEALDLFLTMLER 295
Query: 354 GRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESA 175
PN AT+VS SAVSGLA L G+W+HSY+ K GF+LDGVL T LI MY+KCG+IESA
Sbjct: 296 DFTPNHATLVSTFSAVSGLASLSTGKWMHSYMVKNGFQLDGVLATSLINMYSKCGNIESA 355
Query: 174 QTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNACS 1
+VF+ I+KKKLGHWTA+IVGLG+HGMA +A+E F EMC+ G++P+AITFIGVLNACS
Sbjct: 356 LSVFQLITKKKLGHWTAIIVGLGMHGMADNALEFFHEMCRTGMRPHAITFIGVLNACS 413
Score = 68.9 bits (167), Expect = 2e-09
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 39/185 (21%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIF------DK 553
WN+++ Y K A++LFD+MPE++L SW +V G+ + A ++F D
Sbjct: 238 WNAMINGYMKAGDFVLASELFDKMPEKNLISWNSMVAGYDLNERFKEALDLFLTMLERDF 297
Query: 552 MPNR-NLVS---------------W-----------------NAMIDGYMKSGDFDSALQ 472
PN LVS W ++I+ Y K G+ +SAL
Sbjct: 298 TPNHATLVSTFSAVSGLASLSTGKWMHSYMVKNGFQLDGVLATSLINMYSKCGNIESALS 357
Query: 471 LFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSGLAI 292
+F + + W ++I G ++G ALE+F +M G P+ T + L+A S +
Sbjct: 358 VFQLITKKKLGHWTAIIVGLGMHGMADNALEFFHEMCRTGMRPHAITFIGVLNACSHAGL 417
Query: 291 LIKGR 277
+ GR
Sbjct: 418 VEDGR 422
Score = 67.8 bits (164), Expect = 4e-09
Identities = 41/147 (27%), Positives = 75/147 (51%)
Frame = -1
Query: 501 KSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVS 322
K + + L +FN++ + +N +I Y N +A+ F ++L P+ T+
Sbjct: 54 KINNLEYVLSIFNKIQEPALVLYNILIKCYIQNQLSHDAITLFSQLLHEFN-PDGFTLPC 112
Query: 321 ALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKK 142
+ + L +G+ IH + K+GF L+ + + L+ MY+KC I+SA+ VF ++ K
Sbjct: 113 VIKGCARLHATKEGKQIHGLVLKLGFGLNKFVSSSLVNMYSKCKDIDSAKKVFLSMDDKD 172
Query: 141 LGHWTAVIVGLGVHGMAYHAIELFQEM 61
L W ++I G G ++LF+EM
Sbjct: 173 LVSWNSLIDGYVKCGQVELGMKLFEEM 199
>ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 319 bits (818), Expect = 5e-85
Identities = 149/238 (62%), Positives = 190/238 (79%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPNRNL 535
WNSL+ Y++C ++ A ++F+EMPE+D FSWT+L+DG SK GK++AAR++FD+MP RN
Sbjct: 183 WNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNS 242
Query: 534 VSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEA 355
VSWNAMI+GYMK+GD ++A +LF+QMP R +TWNSMI GYE N QF +AL+ F ML
Sbjct: 243 VSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLRE 302
Query: 354 GRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESA 175
PN TI+ A+SA SG+ L GRW+HSYI K GF+ DGVLGT+LIEMY+KCGS++SA
Sbjct: 303 DISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSA 362
Query: 174 QTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNACS 1
VFR+I KKKLGHWT+VIVGLG+HG+ +ELF EMC+ GLKP+AITFIGVLNACS
Sbjct: 363 LRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACS 420
Score = 74.3 bits (181), Expect = 4e-11
Identities = 44/140 (31%), Positives = 74/140 (52%)
Frame = -1
Query: 480 ALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSG 301
A LF+ + ++WN +I Y N + +A+ F K+L +P+ T+ L +
Sbjct: 68 AHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLL-CDFVPDSFTLPCVLKGCAR 126
Query: 300 LAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKLGHWTAV 121
L L +G+ IH + K+GF +D + + L+ MY+KCG IE + VF + K + W ++
Sbjct: 127 LGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSL 186
Query: 120 IVGLGVHGMAYHAIELFQEM 61
I G G A+E+F+EM
Sbjct: 187 IDGYARCGEIELALEMFEEM 206
>ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 821
Score = 309 bits (792), Expect = 5e-82
Identities = 148/238 (62%), Positives = 189/238 (79%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPNRNL 535
WNSL+ Y++C ++ A +LF+EM ERD FSWTVLVDG SKCG V ARE+F++MP++N+
Sbjct: 323 WNSLIDGYARCGRVDVAVELFEEMEERDEFSWTVLVDGLSKCGHVKKAREVFERMPSKNV 382
Query: 534 VSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEA 355
VSWNAMI+GYMK G+F+ A +LF +M +RD I+WNSMI+GYE NG+F EALE F ++LE
Sbjct: 383 VSWNAMINGYMKGGEFEKARELFGRMGSRDVISWNSMISGYEFNGRFGEALELFREVLEE 442
Query: 354 GRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESA 175
P AT+VS LSAVSGLA L KGR +HS + K GFEL+GVLGT LI+MY+KCGSI+SA
Sbjct: 443 DVRPTPATLVSVLSAVSGLAALSKGRIVHSVMVKHGFELEGVLGTSLIDMYSKCGSIDSA 502
Query: 174 QTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNACS 1
VF I +KK+GHWTA+IVGLG+HGMA ++LF EM G++P+ ITFIG+LNACS
Sbjct: 503 MAVFEGIQRKKVGHWTAIIVGLGMHGMADQVLQLFLEMRTNGMEPHGITFIGILNACS 560
Score = 79.0 bits (193), Expect = 2e-12
Identities = 43/140 (30%), Positives = 82/140 (58%)
Frame = -1
Query: 480 ALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSG 301
AL +F+ +P + I++N ++ + LN + +AL F+++L P+ T+ S + A +
Sbjct: 208 ALSVFSHLPNPNLISFNLLLKSHLLNHRSHDALLLFFRLLHH-HAPDNFTLPSVVKACAR 266
Query: 300 LAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKLGHWTAV 121
L + +G+ +H+ K+G L+ + + L+ +Y+KCG+IE A+ VF + ++ L W ++
Sbjct: 267 LGAVAEGKQVHALALKIGLGLEMYVQSSLVSLYSKCGAIECARKVFDEMRERDLVAWNSL 326
Query: 120 IVGLGVHGMAYHAIELFQEM 61
I G G A+ELF+EM
Sbjct: 327 IDGYARCGRVDVAVELFEEM 346
Score = 70.5 bits (171), Expect = 6e-10
Identities = 48/175 (27%), Positives = 84/175 (48%)
Frame = -1
Query: 525 NAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRL 346
++++ Y K G + A ++F++M RD + WNS+I GY G+ A+E F +M E
Sbjct: 293 SSLVSLYSKCGAIECARKVFDEMRERDLVAWNSLIDGYARCGRVDVAVELFEEMEERDEF 352
Query: 345 PNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTV 166
+ +V LS + K R + + V +I Y K G E A+ +
Sbjct: 353 -SWTVLVDGLSKCGHVK---KAREVFERMPSKNV----VSWNAMINGYMKGGEFEKAREL 404
Query: 165 FRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNACS 1
F + + + W ++I G +G A+ELF+E+ + ++P T + VL+A S
Sbjct: 405 FGRMGSRDVISWNSMISGYEFNGRFGEALELFREVLEEDVRPTPATLVSVLSAVS 459
Score = 68.2 bits (165), Expect = 3e-09
Identities = 52/246 (21%), Positives = 102/246 (41%), Gaps = 41/246 (16%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPNRNL 535
WN+++ Y K + A +LF M RD+ SW ++ G+ G+ A E+F ++ ++
Sbjct: 385 WNAMINGYMKGGEFEKARELFGRMGSRDVISWNSMISGYEFNGRFGEALELFREVLEEDV 444
Query: 534 ---------------------------------------VSWNAMIDGYMKSGDFDSALQ 472
V ++ID Y K G DSA+
Sbjct: 445 RPTPATLVSVLSAVSGLAALSKGRIVHSVMVKHGFELEGVLGTSLIDMYSKCGSIDSAMA 504
Query: 471 LFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSGLAI 292
+F + + W ++I G ++G + L+ F +M G P+ T + L+A S +
Sbjct: 505 VFEGIQRKKVGHWTAIIVGLGMHGMADQVLQLFLEMRTNGMEPHGITFIGILNACSHAGL 564
Query: 291 LIKGRWIHSYITK-MGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKLGH-WTAVI 118
+ GR+ + + K G E L+++ + G ++ A+ + ++ K W +++
Sbjct: 565 VDLGRYYFNMMRKDYGIEPTIEHYGCLVDILCRAGCLDEAKDIIGSMPMKPNKFIWMSLL 624
Query: 117 VGLGVH 100
G +H
Sbjct: 625 SGARIH 630
>ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutrema salsugineum]
gi|557096454|gb|ESQ36962.1| hypothetical protein
EUTSA_v10002407mg [Eutrema salsugineum]
Length = 784
Score = 308 bits (788), Expect = 2e-81
Identities = 146/242 (60%), Positives = 189/242 (78%), Gaps = 4/242 (1%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPNRNL 535
WNSL+ Y++ + A KLFDE+P RD +SWT L+ GFSK GK++AAR++FDKMP +NL
Sbjct: 284 WNSLIDGYARSGDVETARKLFDEIPRRDSYSWTALLHGFSKSGKIEAARDVFDKMPTKNL 343
Query: 534 VSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEA 355
VSWNAMI+GYM+SGDF+SA +LFN MP R+ ITWNS+IAGYE+ G+F EAL F +ML+
Sbjct: 344 VSWNAMINGYMRSGDFESACELFNTMPERNLITWNSIIAGYEVYGRFEEALSMFLRMLQE 403
Query: 354 GR----LPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGS 187
PN AT S +SAV+ AIL G+W+HSY+ K G +DGV+GT+LIEMY+KCGS
Sbjct: 404 EEDDFIKPNNATFTSLISAVAASAILSTGKWVHSYMVKNGMAIDGVIGTLLIEMYSKCGS 463
Query: 186 IESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNA 7
IESA TVF +I +KKLGHW +VIVGLG+HGMA A+ELF++M + G+KPN +TF+G+LNA
Sbjct: 464 IESALTVFTSIHRKKLGHWNSVIVGLGMHGMADEALELFKKMQESGIKPNTVTFVGLLNA 523
Query: 6 CS 1
S
Sbjct: 524 FS 525
Score = 81.3 bits (199), Expect = 3e-13
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 44/227 (19%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKM----- 550
WN+++ Y + A +LF+ MPER+L +W ++ G+ G+ + A +F +M
Sbjct: 346 WNAMINGYMRSGDFESACELFNTMPERNLITWNSIIAGYEVYGRFEEALSMFLRMLQEEE 405
Query: 549 -----PNR----NLVS------------W-------NAM-IDG---------YMKSGDFD 484
PN +L+S W N M IDG Y K G +
Sbjct: 406 DDFIKPNNATFTSLISAVAASAILSTGKWVHSYMVKNGMAIDGVIGTLLIEMYSKCGSIE 465
Query: 483 SALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVS 304
SAL +F + + WNS+I G ++G EALE F KM E+G PN T V L+A S
Sbjct: 466 SALTVFTSIHRKKLGHWNSVIVGLGMHGMADEALELFKKMQESGIKPNTVTFVGLLNAFS 525
Query: 303 GLAILIKGRWIHSY-ITKMGFELDGVLGTVLIEMYTKCGSIESAQTV 166
+ + + + + K G E + L+++ + G ++ A+TV
Sbjct: 526 HVGYVKEAHLYFDFMVKKYGIEREIEHYGCLVDVLCRTGRLQEAKTV 572
Score = 68.6 bits (166), Expect = 2e-09
Identities = 43/144 (29%), Positives = 71/144 (49%)
Frame = -1
Query: 492 DFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALS 313
D A +F+ + + WN MI Y N + +A+ F ML P+ T+ +
Sbjct: 165 DLIYARSVFDTIQSPSLPLWNMMIKCYVENHRSHDAIRLFCDMLTEFP-PDNFTLPCVVK 223
Query: 312 AVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKLGH 133
S L + +G+ IH + TK+GF D + + L+ Y+KCG ++ A+ VF + +K L
Sbjct: 224 GCSRLCAVEEGKQIHGFSTKLGFGFDKFVQSSLVSFYSKCGLLDCARKVFDKMGEKDLVT 283
Query: 132 WTAVIVGLGVHGMAYHAIELFQEM 61
W ++I G G A +LF E+
Sbjct: 284 WNSLIDGYARSGDVETARKLFDEI 307
>emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 303 bits (777), Expect = 3e-80
Identities = 150/222 (67%), Positives = 178/222 (80%), Gaps = 11/222 (4%)
Frame = -1
Query: 633 DLFSWTVLVDGFSKCGKVDAAREIFDKMPNR-----------NLVSWNAMIDGYMKSGDF 487
D+F LV+ +SKCG++D AR++FD M ++ NLVSWNAMI+GYMKSGDF
Sbjct: 149 DVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDF 208
Query: 486 DSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAV 307
DSAL+LF QMP D +TWN MIAGYELNGQFM+A++ F+ ML+ G P+ AT+VS LSAV
Sbjct: 209 DSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAV 268
Query: 306 SGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKLGHWT 127
SGLA+L KGRWIHSY+ K GFELDG+LGT LIEMY KCG IESA TVFRAI KKK+GHWT
Sbjct: 269 SGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWT 328
Query: 126 AVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNACS 1
A+IVGLG+HGMA HA+ LF EMC+ GLKPNAI FIGVLNAC+
Sbjct: 329 AIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACN 370
Score = 65.9 bits (159), Expect = 1e-08
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 42/209 (20%)
Frame = -1
Query: 501 KSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVS 322
K D A +F+++ R I WN++I Y N + + F +++ LP+ T+
Sbjct: 62 KINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHE-YLPDNFTLPC 120
Query: 321 ALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKK- 145
+ + L ++ +G+ IH K+GF D + L+ MY+KCG I+ A+ VF + K
Sbjct: 121 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 180
Query: 144 -----------------------------------------KLGHWTAVIVGLGVHGMAY 88
L W +I G ++G
Sbjct: 181 VVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFM 240
Query: 87 HAIELFQEMCQIGLKPNAITFIGVLNACS 1
A+++F M ++G +P+ T + VL+A S
Sbjct: 241 DAVKMFFMMLKLGSRPSHATLVSVLSAVS 269
>ref|XP_004295356.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62890-like [Fragaria vesca subsp. vesca]
Length = 488
Score = 298 bits (763), Expect = 1e-78
Identities = 145/231 (62%), Positives = 183/231 (79%)
Frame = -1
Query: 693 YSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPNRNLVSWNAMI 514
Y++C ++ A +LF+EM ERD FSWTVLVDG SKCG+V+ ARE+F++MP++N+VSWNAMI
Sbjct: 99 YARCGRVDVAVELFEEMEERDEFSWTVLVDGLSKCGQVEKAREVFERMPSKNVVSWNAMI 158
Query: 513 DGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQA 334
+GYMK G+F+ A +LF QM +RD I+WNSMIAGYE NG+F EALE F ++LE P A
Sbjct: 159 NGYMKGGEFEKARELFGQMGSRDVISWNSMIAGYEFNGRFGEALELFREVLEEDVRPTPA 218
Query: 333 TIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAI 154
T+VS LSAVSGLA L KGR +HS + K GFEL+GVLGT LI MY+KCGSI+SA VF I
Sbjct: 219 TLVSVLSAVSGLAALSKGRIVHSVMVKHGFELEGVLGTSLIYMYSKCGSIDSAMAVFEGI 278
Query: 153 SKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNACS 1
+KK GH TA+IVGLG+HGMA ++LF EM G++P+ ITFIG+LNACS
Sbjct: 279 QRKKXGHSTAIIVGLGMHGMADQVLQLFLEMRTNGMEPHGITFIGILNACS 329
>ref|XP_007215365.1| hypothetical protein PRUPE_ppa005588mg [Prunus persica]
gi|462411515|gb|EMJ16564.1| hypothetical protein
PRUPE_ppa005588mg [Prunus persica]
Length = 453
Score = 290 bits (743), Expect = 3e-76
Identities = 142/191 (74%), Positives = 164/191 (85%)
Frame = -1
Query: 573 AREIFDKMPNRNLVSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQF 394
AREIFD+MPNRNLVSWNAMI+GYMKSGDF+ A QLF MP RD ITWNSMIAGYE NGQF
Sbjct: 2 AREIFDRMPNRNLVSWNAMINGYMKSGDFEMARQLFGLMPTRDIITWNSMIAGYEFNGQF 61
Query: 393 MEALEWFWKMLEAGRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVL 214
MEALE F ++LE +P+ AT+VSALSAVSGLA L KGRWIHS++ K GF+LDGVLGT L
Sbjct: 62 MEALELFQEILEEDIMPSHATLVSALSAVSGLATLSKGRWIHSFMVKHGFDLDGVLGTSL 121
Query: 213 IEMYTKCGSIESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNA 34
IE+Y+KCGSIESA VFRAI +KKLGHWTA+IVGLG+HGMA +ELF EM + G++P++
Sbjct: 122 IELYSKCGSIESALAVFRAIDRKKLGHWTAIIVGLGMHGMADQVLELFLEMRKNGMRPHS 181
Query: 33 ITFIGVLNACS 1
ITFIGVLNACS
Sbjct: 182 ITFIGVLNACS 192
Score = 66.6 bits (161), Expect = 8e-09
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 41/231 (17%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIF------DK 553
WN+++ Y K A +LF MP RD+ +W ++ G+ G+ A E+F D
Sbjct: 17 WNAMINGYMKSGDFEMARQLFGLMPTRDIITWNSMIAGYEFNGQFMEALELFQEILEEDI 76
Query: 552 MPNR-NLVS---------------W-----------------NAMIDGYMKSGDFDSALQ 472
MP+ LVS W ++I+ Y K G +SAL
Sbjct: 77 MPSHATLVSALSAVSGLATLSKGRWIHSFMVKHGFDLDGVLGTSLIELYSKCGSIESALA 136
Query: 471 LFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSGLAI 292
+F + + W ++I G ++G + LE F +M + G P+ T + L+A S +
Sbjct: 137 VFRAIDRKKLGHWTAIIVGLGMHGMADQVLELFLEMRKNGMRPHSITFIGVLNACSHAGL 196
Query: 291 LIKGRWIHSYITKMGFELDGVLG--TVLIEMYTKCGSIESAQTVFRAISKK 145
+ GR+ + + +E++ + +++ + G ++ A+ V + K
Sbjct: 197 VDLGRYYFNLMIN-DYEIEPTIEHYGCFVDILCRAGCLDEAKNVIEGMPMK 246
>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 229 bits (583), Expect = 9e-58
Identities = 116/240 (48%), Positives = 161/240 (67%), Gaps = 2/240 (0%)
Frame = -1
Query: 714 WNSLLFMYSKCRQ-LSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPNRN 538
WNS++ Y++ + L A +LF+EMP+RDL SW ++DG KCGK++ A +F++MP R+
Sbjct: 224 WNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRD 283
Query: 537 LVSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLE 358
+VSW M+DGY K G+ D A LF++MP RD I+ N+M+AGY NG MEAL +F ML
Sbjct: 284 VVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLS 343
Query: 357 AGRL-PNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIE 181
L P+ AT++ LSA++ L +G +H YI GF L LG LI+MY KCGSI+
Sbjct: 344 RKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSID 403
Query: 180 SAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNACS 1
+A +VF I K + HW A+I GL +HG+ A ELF EM ++ +KP+ ITFIGVLNAC+
Sbjct: 404 NALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACN 463
Score = 88.2 bits (217), Expect = 3e-15
Identities = 65/212 (30%), Positives = 111/212 (52%), Gaps = 3/212 (1%)
Frame = -1
Query: 633 DLFSWTVLVDGFSKCGKVDAAREIFDKMPNRNLVSWNAMIDGYMKSGDFDSALQLFNQMP 454
D+F L+ + +CG + AR++FD+M R+ VS+N+MIDGY+K G SA +LF+ MP
Sbjct: 156 DVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMP 215
Query: 453 ARDR--ITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSGLAILIKG 280
+ I+WNSMI+GY + E L W++ E +P + ++S S + G K
Sbjct: 216 MEQKNLISWNSMISGY---ARSEEGLRVAWELFE--EMPKR-DLISWNSMIDGCVKCGKM 269
Query: 279 RWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKLGHWTAVIVGLGVH 100
H +M + D V +++ Y K G I+ A+ +F + ++ + A++ G +
Sbjct: 270 ENAHHLFNQMP-KRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQN 328
Query: 99 GMAYHAIELFQEM-CQIGLKPNAITFIGVLNA 7
G A+ F +M + L P+ T + L+A
Sbjct: 329 GHLMEALNFFHDMLSRKELFPDNATLLITLSA 360
>ref|XP_002320719.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550323642|gb|EEE99034.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 643
Score = 226 bits (577), Expect = 5e-57
Identities = 115/239 (48%), Positives = 163/239 (68%), Gaps = 2/239 (0%)
Frame = -1
Query: 714 WNSLLFMYSKCRQ-LSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPNRN 538
WNSL+ Y++ + A +LF +MPERDL SW ++DG KCG+++ A+ +FD+MPNR+
Sbjct: 229 WNSLIRGYAQSEDGILVAWQLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRD 288
Query: 537 LVSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLE 358
+VSW MIDGY K+G D A LF++MP RD + +N+M+ GY NG MEAL F+ M
Sbjct: 289 IVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQS 348
Query: 357 AGR-LPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIE 181
G L + AT++ ALSA++ L + KG IH +I ++GF LDG LG LI+MY+KCGSIE
Sbjct: 349 DGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIE 408
Query: 180 SAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNAC 4
+A VF I +K + HW A+I GL +HG+ A + EM ++ ++P+ ITFIG+LNAC
Sbjct: 409 NAMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNAC 467
Score = 82.8 bits (203), Expect = 1e-13
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Frame = -1
Query: 633 DLFSWTVLVDGFSKCGKVDAAREIFDKMPNRNLVSWNAMIDGYMKSGDFDSALQLFNQMP 454
DLF L+ + KCG + A ++FD+MP R+ VS+N+MIDGY+K G D A +F+ +P
Sbjct: 161 DLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIP 220
Query: 453 ARDR--ITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSGLAILIKG 280
+R I+WNS+I GY Q + + W++ ++P
Sbjct: 221 LEERNLISWNSLIRGY---AQSEDGILVAWQLF--AKMP--------------------- 254
Query: 279 RWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKLGHWTAVIVGLGVH 100
E D + +I+ KCG +E AQ +F + + + W +I G +
Sbjct: 255 ------------ERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKN 302
Query: 99 GMAYHAIELFQEM 61
G A LF EM
Sbjct: 303 GRVDIARSLFDEM 315
>ref|XP_006420414.1| hypothetical protein CICLE_v10006642mg [Citrus clementina]
gi|557522287|gb|ESR33654.1| hypothetical protein
CICLE_v10006642mg [Citrus clementina]
Length = 530
Score = 221 bits (564), Expect = 1e-55
Identities = 103/241 (42%), Positives = 159/241 (65%)
Frame = -1
Query: 723 IFIWNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPN 544
+F+ +L+ YS + ++ +FDEMP+RD+FSWT +V ++ G + +AR +FD+MP
Sbjct: 112 VFVQTALVDYYSNSNKFFESRSVFDEMPQRDIFSWTTMVLAHARAGDLCSARRLFDEMPE 171
Query: 543 RNLVSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKM 364
RN+ +WN MID Y + G+ +A LFN+MPARD I+W +MI Y N QF EAL+ F +M
Sbjct: 172 RNIATWNTMIDAYARLGNVQAAELLFNKMPARDIISWTTMITCYSQNNQFREALDAFNEM 231
Query: 363 LEAGRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSI 184
++G P+Q T+ + LSA + L L GR IH Y+ ++GF++D +G+ LI+MY KCGS+
Sbjct: 232 KKSGISPDQVTMATVLSACAHLGALDLGREIHLYVMQIGFDIDVYIGSALIDMYAKCGSL 291
Query: 183 ESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNAC 4
+ + VF + +K L W ++I GL HG A+ A+ +F M ++PN +TFI VL+AC
Sbjct: 292 DRSLLVFFKLREKNLFCWNSIIEGLAAHGFAHEALAMFDRMIYENVEPNGVTFISVLSAC 351
Query: 3 S 1
+
Sbjct: 352 T 352
Score = 74.3 bits (181), Expect = 4e-11
Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 42/250 (16%)
Frame = -1
Query: 723 IFIWNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPN 544
I WN+++ Y++ + A LF++MP RD+ SWT ++ +S+ + A + F++M
Sbjct: 174 IATWNTMIDAYARLGNVQAAELLFNKMPARDIISWTTMITCYSQNNQFREALDAFNEMKK 233
Query: 543 RNLVS---------------------------------------WNAMIDGYMKSGDFDS 481
+ +A+ID Y K G D
Sbjct: 234 SGISPDQVTMATVLSACAHLGALDLGREIHLYVMQIGFDIDVYIGSALIDMYAKCGSLDR 293
Query: 480 ALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSG 301
+L +F ++ ++ WNS+I G +G EAL F +M+ PN T +S LSA +
Sbjct: 294 SLLVFFKLREKNLFCWNSIIEGLAAHGFAHEALAMFDRMIYENVEPNGVTFISVLSACTH 353
Query: 300 LAILIKGRWIHSYITKMGFELDGVLG--TVLIEMYTKCGSIESAQTVFRAIS-KKKLGHW 130
++ +GR +T G+ + + ++++ +K G +E A + R+ + W
Sbjct: 354 AGLVEEGRRRFLSMT-CGYSITPEVEHYGCMVDLLSKAGLLEDALELIRSSKFQPNAVIW 412
Query: 129 TAVIVGLGVH 100
A++ G +H
Sbjct: 413 GALLGGCKLH 422
>ref|XP_007215675.1| hypothetical protein PRUPE_ppa003946mg [Prunus persica]
gi|462411825|gb|EMJ16874.1| hypothetical protein
PRUPE_ppa003946mg [Prunus persica]
Length = 539
Score = 221 bits (563), Expect = 2e-55
Identities = 108/241 (44%), Positives = 165/241 (68%), Gaps = 1/241 (0%)
Frame = -1
Query: 720 FIWNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPNR 541
F+ N+L++ ++ C L A++LFD +RD+ W+ L G+++ GK+D AR++FD+MP +
Sbjct: 149 FVRNTLIYFHANCGDLKIASELFDASAKRDVVPWSALTAGYARRGKLDEARQLFDEMPVK 208
Query: 540 NLVSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKML 361
+LVSWN MI GY K G+ +SA +LF+++P RD +TWN+MIAGY L G +AL+ F +M
Sbjct: 209 DLVSWNVMITGYGKQGEMESARKLFDKVPERDVVTWNAMIAGYVLCGSNEQALQMFEEMR 268
Query: 360 EAGRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMG-FELDGVLGTVLIEMYTKCGSI 184
G P++ T++S LSA + + L G+ IHS + +MG ++ +LG LI+MY+KCGSI
Sbjct: 269 SLGEKPDEVTMLSLLSACTDIGDLDVGQKIHSALLEMGRGDMSIILGNALIDMYSKCGSI 328
Query: 183 ESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNAC 4
E A VF+ + K + W +VI GL HG A ++ LF+EM ++ ++PN ITF+GVL AC
Sbjct: 329 ERAVEVFQKMRDKDVSSWNSVIGGLAFHGHAEESVNLFEEMRRLKIRPNEITFVGVLVAC 388
Query: 3 S 1
S
Sbjct: 389 S 389
Score = 87.0 bits (214), Expect = 6e-15
Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 45/282 (15%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPN--- 544
WN ++ Y K ++ A KLFD++PERD+ +W ++ G+ CG + A ++F++M +
Sbjct: 213 WNVMITGYGKQGEMESARKLFDKVPERDVVTWNAMIAGYVLCGSNEQALQMFEEMRSLGE 272
Query: 543 -------------------------------------RNLVSWNAMIDGYMKSGDFDSAL 475
+++ NA+ID Y K G + A+
Sbjct: 273 KPDEVTMLSLLSACTDIGDLDVGQKIHSALLEMGRGDMSIILGNALIDMYSKCGSIERAV 332
Query: 474 QLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSGLA 295
++F +M +D +WNS+I G +G E++ F +M PN+ T V L A S
Sbjct: 333 EVFQKMRDKDVSSWNSVIGGLAFHGHAEESVNLFEEMRRLKIRPNEITFVGVLVACS--- 389
Query: 294 ILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKK-----KLGHW 130
G +E + F + K + H+
Sbjct: 390 --------------------------------HAGKVEEGRRYFNLMKHKYKIEPNIKHY 417
Query: 129 TAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNAC 4
++ LG G+ A E ++M ++PNAI + +L AC
Sbjct: 418 GCMVDMLGRAGLLDEAFEFIEKM---EIEPNAIVWRTLLGAC 456
Score = 72.4 bits (176), Expect = 1e-10
Identities = 43/146 (29%), Positives = 69/146 (47%)
Frame = -1
Query: 498 SGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSA 319
SG D A QLF + D WN+MI G + + A+ + +M +P+ T
Sbjct: 60 SGTIDYAHQLFVHVAEPDTFMWNTMIRGSAQSQNPLNAIVLYTRMENRHAMPDSFTFPFI 119
Query: 318 LSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKL 139
L A + L+ + G IH + + GFE + + LI + CG ++ A +F A +K+ +
Sbjct: 120 LKACTKLSWVKMGMGIHGKVVRFGFESNTFVRNTLIYFHANCGDLKIASELFDASAKRDV 179
Query: 138 GHWTAVIVGLGVHGMAYHAIELFQEM 61
W+A+ G G A +LF EM
Sbjct: 180 VPWSALTAGYARRGKLDEARQLFDEM 205
>ref|XP_006493995.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Citrus sinensis]
Length = 578
Score = 221 bits (562), Expect = 3e-55
Identities = 103/241 (42%), Positives = 159/241 (65%)
Frame = -1
Query: 723 IFIWNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPN 544
+F+ +L+ YS + ++ +FDEMP+RD+FSWT +V ++ G + +AR +FD+MP
Sbjct: 160 VFVQTALVDYYSNSNKFFESRSVFDEMPQRDIFSWTTMVLAHARAGDLCSARRLFDEMPE 219
Query: 543 RNLVSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKM 364
RN+ +WN MID Y + G+ +A LFN+MPARD I+W +MI Y N QF EAL+ F +M
Sbjct: 220 RNIATWNTMIDAYARLGNVRAAELLFNKMPARDIISWTTMITCYSQNKQFREALDAFNEM 279
Query: 363 LEAGRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSI 184
+G P+Q T+ + LSA + L L GR IH Y+ ++GF++D +G+ L++MY KCGS+
Sbjct: 280 KNSGISPDQVTMATVLSACAHLGALDLGREIHLYVMQIGFDIDVYIGSALVDMYAKCGSL 339
Query: 183 ESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNAC 4
+ + VF + +K L W ++I GL VHG A+ A+ +F M ++PN +TFI VL+AC
Sbjct: 340 DRSLLVFFKLREKNLFCWNSIIEGLAVHGFAHEALAMFDRMIYENVEPNGVTFISVLSAC 399
Query: 3 S 1
+
Sbjct: 400 T 400
Score = 75.9 bits (185), Expect = 1e-11
Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 42/250 (16%)
Frame = -1
Query: 723 IFIWNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPN 544
I WN+++ Y++ + A LF++MP RD+ SWT ++ +S+ + A + F++M N
Sbjct: 222 IATWNTMIDAYARLGNVRAAELLFNKMPARDIISWTTMITCYSQNKQFREALDAFNEMKN 281
Query: 543 RNLVS---------------------------------------WNAMIDGYMKSGDFDS 481
+ +A++D Y K G D
Sbjct: 282 SGISPDQVTMATVLSACAHLGALDLGREIHLYVMQIGFDIDVYIGSALVDMYAKCGSLDR 341
Query: 480 ALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSG 301
+L +F ++ ++ WNS+I G ++G EAL F +M+ PN T +S LSA +
Sbjct: 342 SLLVFFKLREKNLFCWNSIIEGLAVHGFAHEALAMFDRMIYENVEPNGVTFISVLSACTH 401
Query: 300 LAILIKGRWIHSYITKMGFELDGVLG--TVLIEMYTKCGSIESAQTVFRAIS-KKKLGHW 130
++ +GR +T G+ + + ++++ +K G +E A + R+ + W
Sbjct: 402 AGLVEEGRRRFLSMT-CGYSITPEVEHYGCMVDLLSKAGLLEDALELIRSSKFQPNAVIW 460
Query: 129 TAVIVGLGVH 100
A++ G +H
Sbjct: 461 GALLGGCKLH 470
>ref|XP_007156271.1| hypothetical protein PHAVU_003G272400g [Phaseolus vulgaris]
gi|561029625|gb|ESW28265.1| hypothetical protein
PHAVU_003G272400g [Phaseolus vulgaris]
Length = 618
Score = 220 bits (561), Expect = 3e-55
Identities = 106/251 (42%), Positives = 158/251 (62%), Gaps = 10/251 (3%)
Frame = -1
Query: 723 IFIWNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPN 544
+F W +++ + CR ++ A +LFD P+RD+ W V+V G+ + G + AAR +FDKMPN
Sbjct: 188 VFAWTAIIAAHVACRDMASARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARALFDKMPN 247
Query: 543 RNLVSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKM 364
R+++SWN +++GY +GD +S QLF++MPAR+ +WN +I GY NG F EALE F +M
Sbjct: 248 RDVMSWNTVLNGYAYNGDVESFEQLFDEMPARNVYSWNGLIGGYVRNGLFNEALECFKRM 307
Query: 363 LEAGR----------LPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVL 214
L + +PN T+V+ LSA S L L G+W+H Y +G++ + +G L
Sbjct: 308 LMLAKQEGEGGDVVVVPNDYTVVAVLSACSRLGDLEMGKWVHVYAESIGYKENLFVGNAL 367
Query: 213 IEMYTKCGSIESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNA 34
I+MY KCG IE A VF + K + W VI GL +HG A A+ LF+ M G KP+
Sbjct: 368 IDMYAKCGVIEKALDVFNCLDVKDIITWNTVINGLAMHGHAADALSLFERMKSAGEKPDG 427
Query: 33 ITFIGVLNACS 1
+TF+G+L+AC+
Sbjct: 428 VTFVGILSACT 438
Score = 90.9 bits (224), Expect = 4e-16
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 49/289 (16%)
Frame = -1
Query: 723 IFIWNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKM-- 550
+ WN++L Y+ + +LFDEMP R+++SW L+ G+ + G + A E F +M
Sbjct: 250 VMSWNTVLNGYAYNGDVESFEQLFDEMPARNVYSWNGLIGGYVRNGLFNEALECFKRMLM 309
Query: 549 --------------PN---------------------------------RNLVSWNAMID 511
PN NL NA+ID
Sbjct: 310 LAKQEGEGGDVVVVPNDYTVVAVLSACSRLGDLEMGKWVHVYAESIGYKENLFVGNALID 369
Query: 510 GYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQAT 331
Y K G + AL +FN + +D ITWN++I G ++G +AL F +M AG P+ T
Sbjct: 370 MYAKCGVIEKALDVFNCLDVKDIITWNTVINGLAMHGHAADALSLFERMKSAGEKPDGVT 429
Query: 330 IVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAIS 151
V LSA + + L+K ++H + +++ Y+ IE
Sbjct: 430 FVGILSACTHMG-LVKDGFLHFH--------------SMVDNYSIVPQIE---------- 464
Query: 150 KKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNAC 4
H+ ++ LG G+ A++ ++M +KP+AI + +L AC
Sbjct: 465 -----HYGCMVDLLGRAGLIDQAVDFVRKM---PMKPDAIIWAALLGAC 505
Score = 65.1 bits (157), Expect = 2e-08
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 6/199 (3%)
Frame = -1
Query: 696 MYSKCRQL--SDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDA--AREIFDKMPNRNLVS 529
M SK +L +D+ KL + E L S L+ C ++ A+ + + + V+
Sbjct: 1 MQSKIGKLVVNDSPKLLQRVAEETLIS---LLRSCQTCTRLHQIHAQIVAHGLQGNDYVT 57
Query: 528 WNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGR 349
+ I + G A ++F++ + TWNSM G+ L + + F +M AG
Sbjct: 58 -PSFITACARLGRMGHARRVFDRTAQPNGATWNSMFQGFALLESPFDVVVLFAQMHRAGA 116
Query: 348 LPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCG--SIESA 175
PN T + + + + +G +H + K GF+ + +GT LI MY+ G S+ A
Sbjct: 117 SPNCFTFPMVVKSCAQANAVREGEQVHCVVAKRGFKSNSFVGTALIHMYSARGEVSVGDA 176
Query: 174 QTVFRAISKKKLGHWTAVI 118
VF + +K + WTA+I
Sbjct: 177 YKVFGEMREKNVFAWTAII 195
>ref|XP_007050341.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
cacao] gi|508702602|gb|EOX94498.1| Basic
helix-loop-helix DNA-binding superfamily protein
[Theobroma cacao]
Length = 600
Score = 220 bits (561), Expect = 3e-55
Identities = 105/241 (43%), Positives = 156/241 (64%)
Frame = -1
Query: 723 IFIWNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPN 544
+F+ +L+ Y+ + +++ ++FDEMP+RD+F+WT +V GF K G + ++R +FD+MP
Sbjct: 181 VFVQTALVDFYANVGKFAESKRVFDEMPDRDVFAWTTMVSGFLKAGDLVSSRRLFDEMPE 240
Query: 543 RNLVSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKM 364
RN +WNAMIDGY + GD +SA FNQMP +D I+W SMI Y N QF EAL F +M
Sbjct: 241 RNTATWNAMIDGYARVGDVESAELFFNQMPVKDIISWTSMINCYSKNKQFREALAVFEEM 300
Query: 363 LEAGRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSI 184
P++ T+ S +SA + L L G+ IH Y+ + GF LD +G+ L++MY KCGS+
Sbjct: 301 RRNKVSPDEVTMASVISACAHLGALNTGKEIHHYVMQNGFYLDVYIGSALVDMYAKCGSL 360
Query: 183 ESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNAC 4
E + F + +K L W +VI GL VHG A A+ +F M + +KPN +TF+ VL+AC
Sbjct: 361 ERSLLAFFKLREKNLFCWNSVIEGLAVHGYAQEALAMFDSMERHHVKPNGVTFVSVLSAC 420
Query: 3 S 1
+
Sbjct: 421 T 421
Score = 70.9 bits (172), Expect = 4e-10
Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 42/247 (17%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPNRNL 535
WN+++ Y++ + A F++MP +D+ SWT +++ +SK + A +F++M RN
Sbjct: 246 WNAMIDGYARVGDVESAELFFNQMPVKDIISWTSMINCYSKNKQFREALAVFEEM-RRNK 304
Query: 534 VS----------------------------------------WNAMIDGYMKSGDFDSAL 475
VS +A++D Y K G + +L
Sbjct: 305 VSPDEVTMASVISACAHLGALNTGKEIHHYVMQNGFYLDVYIGSALVDMYAKCGSLERSL 364
Query: 474 QLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSGLA 295
F ++ ++ WNS+I G ++G EAL F M PN T VS LSA +
Sbjct: 365 LAFFKLREKNLFCWNSVIEGLAVHGYAQEALAMFDSMERHHVKPNGVTFVSVLSACTHAG 424
Query: 294 ILIKGRWIHSYITK-MGFELDGVLGTVLIEMYTKCGSIESAQTVFRAIS-KKKLGHWTAV 121
++ GR +T+ + ++++ +K G +E A + R++ + W A+
Sbjct: 425 LVEVGRQRFLSMTRDYSIPPEVEHYGCMVDLLSKAGLLEDALFLIRSMKLEPNPVIWGAL 484
Query: 120 IVGLGVH 100
+ G +H
Sbjct: 485 LGGCKLH 491
Score = 65.1 bits (157), Expect = 2e-08
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 4/188 (2%)
Frame = -1
Query: 612 LVDGFSKCGKVDAAREIFDKM----PNRNLVSWNAMIDGYMKSGDFDSALQLFNQMPARD 445
+VD KC ++ I+ M N++ N + D A+ F QM +
Sbjct: 51 IVDQIKKCSNLNQLETIYATMIKTNANQDCFLTNQFVSACATFCRMDYAILAFTQMQKPN 110
Query: 444 RITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSGLAILIKGRWIHS 265
+N++I G +AL++ ML AG P+ T S + A ++ L G +H
Sbjct: 111 VFVYNALIKGLVHCHNPFQALDYHKHMLRAGVWPSSFTFSSLVKACGLVSELGFGESVHG 170
Query: 264 YITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYH 85
+ K GFE + T L++ Y G ++ VF + + + WT ++ G G
Sbjct: 171 QVWKHGFESHVFVQTALVDFYANVGKFAESKRVFDEMPDRDVFAWTTMVSGFLKAGDLVS 230
Query: 84 AIELFQEM 61
+ LF EM
Sbjct: 231 SRRLFDEM 238
>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 220 bits (561), Expect = 3e-55
Identities = 109/241 (45%), Positives = 164/241 (68%), Gaps = 1/241 (0%)
Frame = -1
Query: 720 FIWNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPNR 541
F+ N+L++ ++ C L+ A LFD +RD+ +W+ L G+++ G++ AR++FD+MP +
Sbjct: 114 FVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVK 173
Query: 540 NLVSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKML 361
+LVSWN MI GY K G+ +SA +LF+++P RD +TWN+MIAGY L G +ALE F +M
Sbjct: 174 DLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMR 233
Query: 360 EAGRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGF-ELDGVLGTVLIEMYTKCGSI 184
G LP++ T++S LSA + L L G+ IH I++MGF +L +LG LI+MY KCGSI
Sbjct: 234 SVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSI 293
Query: 183 ESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNAC 4
A VF+ + +K + W +V+ GL HG A +I LF EM ++ ++P+ ITF+GVL AC
Sbjct: 294 VRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVAC 353
Query: 3 S 1
S
Sbjct: 354 S 354
Score = 80.1 bits (196), Expect = 7e-13
Identities = 65/277 (23%), Positives = 112/277 (40%), Gaps = 40/277 (14%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPN--- 544
WN ++ Y+K ++ A KLFDE+P+RD+ +W ++ G+ CG A E+F++M +
Sbjct: 178 WNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGE 237
Query: 543 -------------------------------------RNLVSWNAMIDGYMKSGDFDSAL 475
+++ NA+ID Y K G AL
Sbjct: 238 LPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRAL 297
Query: 474 QLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSGLA 295
++F M +D TWNS++ G +G +++ F +M + P++ T V L A S
Sbjct: 298 EVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAG 357
Query: 294 ILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKLGHWTAVIV 115
+ +GR Y M E + + + H+ ++
Sbjct: 358 RVEEGR---QYFDLMRDEYN---------------------------IEPNIRHYGCMVD 387
Query: 114 GLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNAC 4
LG G+ A + M ++PNAI + +L AC
Sbjct: 388 LLGRAGLLNEAFDFIDTM---KIEPNAIVWRTLLGAC 421
Score = 63.5 bits (153), Expect = 7e-08
Identities = 40/146 (27%), Positives = 67/146 (45%)
Frame = -1
Query: 498 SGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSA 319
SG A QLF + D WN+MI G + + A+ + +M P++ T
Sbjct: 25 SGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFV 84
Query: 318 LSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKL 139
L A + L + G +H + ++GFE + + LI + CG + A+ +F +K+ +
Sbjct: 85 LKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDV 144
Query: 138 GHWTAVIVGLGVHGMAYHAIELFQEM 61
W+A+ G G A +LF EM
Sbjct: 145 VAWSALTAGYARRGELGVARQLFDEM 170
>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 220 bits (561), Expect = 3e-55
Identities = 109/241 (45%), Positives = 164/241 (68%), Gaps = 1/241 (0%)
Frame = -1
Query: 720 FIWNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPNR 541
F+ N+L++ ++ C L+ A LFD +RD+ +W+ L G+++ G++ AR++FD+MP +
Sbjct: 149 FVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVK 208
Query: 540 NLVSWNAMIDGYMKSGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKML 361
+LVSWN MI GY K G+ +SA +LF+++P RD +TWN+MIAGY L G +ALE F +M
Sbjct: 209 DLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMR 268
Query: 360 EAGRLPNQATIVSALSAVSGLAILIKGRWIHSYITKMGF-ELDGVLGTVLIEMYTKCGSI 184
G LP++ T++S LSA + L L G+ IH I++MGF +L +LG LI+MY KCGSI
Sbjct: 269 SVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSI 328
Query: 183 ESAQTVFRAISKKKLGHWTAVIVGLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNAC 4
A VF+ + +K + W +V+ GL HG A +I LF EM ++ ++P+ ITF+GVL AC
Sbjct: 329 VRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVAC 388
Query: 3 S 1
S
Sbjct: 389 S 389
Score = 80.1 bits (196), Expect = 7e-13
Identities = 65/277 (23%), Positives = 112/277 (40%), Gaps = 40/277 (14%)
Frame = -1
Query: 714 WNSLLFMYSKCRQLSDAAKLFDEMPERDLFSWTVLVDGFSKCGKVDAAREIFDKMPN--- 544
WN ++ Y+K ++ A KLFDE+P+RD+ +W ++ G+ CG A E+F++M +
Sbjct: 213 WNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGE 272
Query: 543 -------------------------------------RNLVSWNAMIDGYMKSGDFDSAL 475
+++ NA+ID Y K G AL
Sbjct: 273 LPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRAL 332
Query: 474 QLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSALSAVSGLA 295
++F M +D TWNS++ G +G +++ F +M + P++ T V L A S
Sbjct: 333 EVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAG 392
Query: 294 ILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKLGHWTAVIV 115
+ +GR Y M E + + + H+ ++
Sbjct: 393 RVEEGR---QYFDLMRDEYN---------------------------IEPNIRHYGCMVD 422
Query: 114 GLGVHGMAYHAIELFQEMCQIGLKPNAITFIGVLNAC 4
LG G+ A + M ++PNAI + +L AC
Sbjct: 423 LLGRAGLLNEAFDFIDTM---KIEPNAIVWRTLLGAC 456
Score = 63.5 bits (153), Expect = 7e-08
Identities = 40/146 (27%), Positives = 67/146 (45%)
Frame = -1
Query: 498 SGDFDSALQLFNQMPARDRITWNSMIAGYELNGQFMEALEWFWKMLEAGRLPNQATIVSA 319
SG A QLF + D WN+MI G + + A+ + +M P++ T
Sbjct: 60 SGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFV 119
Query: 318 LSAVSGLAILIKGRWIHSYITKMGFELDGVLGTVLIEMYTKCGSIESAQTVFRAISKKKL 139
L A + L + G +H + ++GFE + + LI + CG + A+ +F +K+ +
Sbjct: 120 LKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDV 179
Query: 138 GHWTAVIVGLGVHGMAYHAIELFQEM 61
W+A+ G G A +LF EM
Sbjct: 180 VAWSALTAGYARRGELGVARQLFDEM 205