BLASTX nr result
ID: Paeonia24_contig00023956
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00023956
(1111 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252... 371 e-100
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] 371 e-100
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854... 367 4e-99
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 367 5e-99
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 364 3e-98
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera] 355 2e-95
ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628... 296 8e-78
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera] 291 3e-76
emb|CAN69713.1| hypothetical protein VITISV_011261 [Vitis vinifera] 285 3e-74
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s... 251 5e-64
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 245 3e-62
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ... 228 5e-57
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc... 225 2e-56
gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subc... 225 2e-56
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc... 225 3e-56
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ... 225 3e-56
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc... 225 3e-56
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo... 225 3e-56
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc... 224 4e-56
gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group] 224 4e-56
>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
Length = 946
Score = 371 bits (953), Expect = e-100
Identities = 185/362 (51%), Positives = 260/362 (71%), Gaps = 7/362 (1%)
Frame = -3
Query: 1067 ETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWEN 888
+ W +SD++CRN ++N L +Y VY AKELWE+LD+KYKTED KKF+V ++ +
Sbjct: 90 DAWKHSDFLCRNYVMNGLADSLYNVYSDKKIAKELWESLDRKYKTEDAGAKKFVVGRFLD 149
Query: 887 YKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKD 708
YKMVDS+TV SQVQELQ+IL++I AEG ++ E++ VA+I KLPP+WKDFK L+HK+K+
Sbjct: 150 YKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNCLKHKRKE 209
Query: 707 INLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVE-----DSKQKAQXXXXXXXXXXXX 543
+++++LI +L++EEDNR ++K +AKAN VE +K
Sbjct: 210 MSIEDLIIRLRIEEDNRRSEKKGVHTLNEAKANFVEHGQSSKAKTNNNKGKGSKLGPKGG 269
Query: 542 XXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSP-QANITEVDGISKDIENIHLSAVVSEVN 366
G C+NC K GH + DCR P +AN+ +D I+K++ NI L+AVVSEVN
Sbjct: 270 ISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANV--IDNITKNVSNIDLTAVVSEVN 327
Query: 365 LV-TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTS 189
LV +N ++WW+DTGATR +CSD+ +FST+ + E +FMGN++ S ++G G+VILK TS
Sbjct: 328 LVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTS 387
Query: 188 GKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKV 9
GK+LTLT+VL+VP+IRKNL+SGS+L+ GFRLVFES+KFVL+K GMYVGKGY+ DG++K+
Sbjct: 388 GKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFESNKFVLSKSGMYVGKGYMSDGMWKL 447
Query: 8 NV 3
NV
Sbjct: 448 NV 449
>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
Length = 701
Score = 371 bits (952), Expect = e-100
Identities = 189/366 (51%), Positives = 262/366 (71%), Gaps = 1/366 (0%)
Frame = -3
Query: 1097 ETHADEFESYETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISL 918
ET + + W +SD++C+N ++N L +Y VY+ TAKELWE+LD+KYKTED
Sbjct: 81 ETDIQVASAIDAWHHSDFLCKNYVMNGLSDSLYNVYIGKKTAKELWESLDRKYKTEDAGT 140
Query: 917 KKFIVEKWENYKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDF 738
KKF+V ++ ++KMVDS+TV SQVQELQ+IL++I AEG + E++ VA+I KLPP+WKDF
Sbjct: 141 KKFVVGRFLDFKMVDSKTVISQVQELQIILSEILAEGMHLSETFQVAAIIEKLPPAWKDF 200
Query: 737 KCFLRHKKKDINLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVEDSKQKAQXXXXXXX 558
K +L+HK+K++N++ L+ KL++EEDNR A++ G AKAN VE +K +
Sbjct: 201 KSYLKHKQKEMNIEGLVVKLRIEEDNRNAER--IGAISMAKANFVEHGPKKKK---KKLG 255
Query: 557 XXXXXXXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSPQANITEVDGISKDIENIHLSAVV 378
G CYNC K GH A DCR K +AN+ V+ I++ + +I+LSAVV
Sbjct: 256 PKGGISKKQTKFQGKCYNCDKMGHKASDCRLPK-KKREANV--VENITQHVSDINLSAVV 312
Query: 377 SEVNLV-TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVIL 201
EVN+V +N R+WW+DTGATR +CSD+ LF+++ S+ E LFMGN++ S +EG G+V L
Sbjct: 313 LEVNMVGSNPREWWIDTGATRHVCSDKGLFTSFEAASNREKLFMGNSATSEIEGQGKVAL 372
Query: 200 KFTSGKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDG 21
K TSGK+LTL +VL+VP+IRKNL+SGS+L+K GFR+VFESD VL+K GMYVGKGY+ DG
Sbjct: 373 KMTSGKELTLNNVLYVPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMYVGKGYVNDG 432
Query: 20 LFKVNV 3
LFK+NV
Sbjct: 433 LFKLNV 438
>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
vinifera]
Length = 478
Score = 367 bits (943), Expect = 4e-99
Identities = 182/362 (50%), Positives = 261/362 (72%), Gaps = 7/362 (1%)
Frame = -3
Query: 1067 ETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWEN 888
+ W +SD++CRN ++N L +Y VY TAKELWE+LD+KYKTED KKF+V ++ +
Sbjct: 90 DAWKHSDFLCRNYVMNGLADSLYNVYSDKKTAKELWESLDRKYKTEDAGAKKFVVGRFLD 149
Query: 887 YKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKD 708
YKMVDS+TV SQVQELQ+IL++I AEG ++ E++ VA+I KLPP+WKDFK +L+HK+K+
Sbjct: 150 YKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKE 209
Query: 707 INLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVE-----DSKQKAQXXXXXXXXXXXX 543
+++++LI +L++EEDNR ++K +AKAN VE ++K
Sbjct: 210 MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSNAKTNNNKGKGSKLGPKGG 269
Query: 542 XXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSP-QANITEVDGISKDIENIHLSAVVSEVN 366
G C+NC K GH + DCR P +AN+ +D I+K++ +I L+ VVSEVN
Sbjct: 270 ISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANV--IDDITKNVYDIDLTTVVSEVN 327
Query: 365 LV-TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTS 189
LV +N ++WW+DTGATR +CSD+ +FST+ + E +FMGN++ S ++G G+VILK TS
Sbjct: 328 LVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTS 387
Query: 188 GKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKV 9
GK+LTLT+VL+VP+IRKNL+SGS+L+ GFRLVF+S+K VL+K GMYVGKGY+ DG++K+
Sbjct: 388 GKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFDSNKVVLSKSGMYVGKGYMSDGMWKL 447
Query: 8 NV 3
NV
Sbjct: 448 NV 449
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 367 bits (942), Expect = 5e-99
Identities = 183/362 (50%), Positives = 260/362 (71%), Gaps = 7/362 (1%)
Frame = -3
Query: 1067 ETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWEN 888
+ W +SD++CRN ++N L +Y VY TAKELWE+LD+KYKTED KKF+V ++ +
Sbjct: 90 DAWKHSDFLCRNYVMNGLADSLYNVYSDKKTAKELWESLDRKYKTEDAGAKKFVVGRFLD 149
Query: 887 YKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKD 708
YKMVDS+TV SQVQELQ+IL++I AEG ++ E++ VA+I KLPP+WKDFK +L+HK+K+
Sbjct: 150 YKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKE 209
Query: 707 INLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVE-----DSKQKAQXXXXXXXXXXXX 543
+++++LI +L++EEDNR ++K +AKAN VE +K
Sbjct: 210 MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNNKGKGSKLGPKGG 269
Query: 542 XXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSP-QANITEVDGISKDIENIHLSAVVSEVN 366
G C+NC K GH + DCR P +AN+ +D I+K++ +I L+AVVSEVN
Sbjct: 270 ISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANV--IDDITKNVYDIDLTAVVSEVN 327
Query: 365 LV-TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTS 189
LV +N ++WW+DTGATR +CSD+ +FST+ + E +FMGN++ S ++G G+VILK TS
Sbjct: 328 LVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTS 387
Query: 188 GKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKV 9
GK+LTLT+VL+VP+IRKNL+SGS+L+ GFRLVF S+K VL+K GMYVGKGY+ DG++K+
Sbjct: 388 GKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFXSNKVVLSKSGMYVGKGYMSDGMWKL 447
Query: 8 NV 3
NV
Sbjct: 448 NV 449
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 364 bits (935), Expect = 3e-98
Identities = 180/362 (49%), Positives = 259/362 (71%), Gaps = 7/362 (1%)
Frame = -3
Query: 1067 ETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWEN 888
+ W +SD++CRN ++N L +Y VY TAKELWE+LD+KYKTED KKF+V ++ +
Sbjct: 90 DAWKHSDFLCRNYVMNGLTDSLYNVYSDKKTAKELWESLDRKYKTEDAGAKKFVVGRFLD 149
Query: 887 YKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKD 708
YKMVDS+TV SQVQELQ+IL++I A+G ++ E++ VA+I KLPP+WKDFK +L+HK+K+
Sbjct: 150 YKMVDSKTVVSQVQELQVILHEIHADGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKE 209
Query: 707 INLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVE-----DSKQKAQXXXXXXXXXXXX 543
+++++LI +L++EEDNR ++K +A+AN VE +K
Sbjct: 210 MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAQANFVEHGQSSKAKTNNNKGKGSKLGPKGG 269
Query: 542 XXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSP-QANITEVDGISKDIENIHLSAVVSEVN 366
G C+NC K GH + DCR P +AN+ +D I+K++ +I L+ VVSEVN
Sbjct: 270 ISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANV--IDNITKNVSDIDLTTVVSEVN 327
Query: 365 LV-TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTS 189
LV +N ++WW+DTGATR +CSD+ +FST+ + E +FMGN++ S ++G G+VILK TS
Sbjct: 328 LVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTS 387
Query: 188 GKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKV 9
GK+LTLT+VL+VP+IRKNL+ GS+L+ GFRLVFES+K VL+K GMYVGKGY+ DG++K+
Sbjct: 388 GKELTLTNVLYVPEIRKNLVFGSLLNNHGFRLVFESNKVVLSKSGMYVGKGYMSDGMWKL 447
Query: 8 NV 3
NV
Sbjct: 448 NV 449
>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
Length = 1316
Score = 355 bits (911), Expect = 2e-95
Identities = 181/365 (49%), Positives = 241/365 (66%)
Frame = -3
Query: 1097 ETHADEFESYETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISL 918
ET+ ++ + W +SD++CRN +LN LD +Y VY + TAKELW++LDKKYKTED +
Sbjct: 250 ETNKEKVAVVDAWKHSDFLCRNYMLNGLDNTLYNVYCSLKTAKELWDSLDKKYKTEDAGI 309
Query: 917 KKFIVEKWENYKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDF 738
KKFIV K+ ++KM+DS+TV SQVQELQ+IL++I +EG +S+ VA++ KLPP WKDF
Sbjct: 310 KKFIVGKFLDFKMIDSKTVISQVQELQVILHEIHSEGMSFSDSFQVAAVIEKLPPLWKDF 369
Query: 737 KCFLRHKKKDINLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVEDSKQKAQXXXXXXX 558
K +L+HK+K++NL+ELI +L++EEDNR ++K ++AKAN++E + +
Sbjct: 370 KNYLKHKRKEMNLEELIVRLRIEEDNRKSEKK-GNNSMEAKANVIEQGPKTNKKRKHGDQ 428
Query: 557 XXXXXXXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSPQANITEVDGISKDIENIHLSAVV 378
G CYNC K GH + D R
Sbjct: 429 NQNQESNVAKKFKGKCYNCGKTGHKSNDYR------------------------------ 458
Query: 377 SEVNLVTNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILK 198
N+++WWVDTGATR ICS++ +FSTY NE LFMGN+S+S +EG G+VILK
Sbjct: 459 -------NTKEWWVDTGATRHICSNKWMFSTYKPVEQNEELFMGNSSSSKIEGRGKVILK 511
Query: 197 FTSGKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGL 18
TSGK+LTL DVLHVPDI KNL+SGS+LSK GF+LVF SDKFVLTK M+VGKGYL DGL
Sbjct: 512 MTSGKELTLNDVLHVPDICKNLVSGSLLSKNGFKLVFVSDKFVLTKNEMFVGKGYLSDGL 571
Query: 17 FKVNV 3
FK+NV
Sbjct: 572 FKMNV 576
>ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628178 [Citrus sinensis]
Length = 2248
Score = 296 bits (759), Expect = 8e-78
Identities = 159/366 (43%), Positives = 227/366 (62%), Gaps = 1/366 (0%)
Frame = -3
Query: 1097 ETHADEFESYETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISL 918
ET+ + + W +SD++C+N ++N L +Y VY+ A ELWE+LD+KYKTED
Sbjct: 1053 ETNVQVASAIDAWHHSDFLCKNYVMNDLSDSLYNVYIGKKIANELWESLDRKYKTEDA-- 1110
Query: 917 KKFIVEKWENYKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDF 738
G ++ E++ VA+I KLPP+WKDF
Sbjct: 1111 ------------------------------------GMMLSETFQVAAIIEKLPPTWKDF 1134
Query: 737 KCFLRHKKKDINLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVEDSKQKAQXXXXXXX 558
K +L+HK K++N++EL+ KL++EEDNR A++ G AKAN+VE + +
Sbjct: 1135 KSYLKHKCKEMNIEELVVKLRIEEDNRNAER--IGAISMAKANVVEHRPKNKKNKKLGPK 1192
Query: 557 XXXXXXXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSPQANITEVDGISKDIENIHLSAVV 378
+NC K GH DCR K + N+ V+ I++ + +I+LSAVV
Sbjct: 1193 GGISKKQTNFQGKY--FNCDKMGHKVSDCRLPK-KKREENV--VENITQHVSDINLSAVV 1247
Query: 377 SEVNLV-TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVIL 201
SEVNLV +N R+WW+DTGATR +CSD+ LF+++ S+ E LFMGN++ S +EG G VIL
Sbjct: 1248 SEVNLVGSNPREWWIDTGATRHVCSDKGLFTSFETVSNGEKLFMGNSAMSEIEGQGNVIL 1307
Query: 200 KFTSGKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDG 21
K TSGK+LTL DVL+V +IRKNL+SGS+L+K GF++VFES++ VL+K GMYVGKGY+ DG
Sbjct: 1308 KMTSGKELTLNDVLYVLEIRKNLVSGSLLNKHGFQMVFESNRVVLSKNGMYVGKGYVNDG 1367
Query: 20 LFKVNV 3
LFK+N+
Sbjct: 1368 LFKLNI 1373
>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
Length = 1096
Score = 291 bits (745), Expect = 3e-76
Identities = 158/362 (43%), Positives = 226/362 (62%), Gaps = 7/362 (1%)
Frame = -3
Query: 1067 ETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWEN 888
+ W +SD++CRN ++N L +Y VY TAKELWE+LD+KYKTED KKF+V ++ +
Sbjct: 39 DAWKHSDFLCRNYVMNGLADSLYNVYSDKKTAKELWESLDRKYKTEDAGAKKFVVGRFLD 98
Query: 887 YKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKD 708
YKMVDS+TV L+L + P WKDFK +L+HK+K+
Sbjct: 99 YKMVDSKTV--------LLLRNY--------------------PLPWKDFKNYLKHKRKE 130
Query: 707 INLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVED-----SKQKAQXXXXXXXXXXXX 543
+++++LI +L++EEDNR ++K +AKAN VE +K
Sbjct: 131 MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNNKGKGSKLGPKGG 190
Query: 542 XXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSP-QANITEVDGISKDIENIHLSAVVSEVN 366
G C+NC K GH + DCR P +AN+ +D I+K++ +I L+AVVSEVN
Sbjct: 191 ISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANV--IDDITKNVYDIDLTAVVSEVN 248
Query: 365 LV-TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTS 189
LV +N ++WW+DTGATR +CSD+ +FST+ + E +FMGN++ S ++G G+VILK TS
Sbjct: 249 LVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTS 308
Query: 188 GKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKV 9
GK+LTLT+VL+VP+IRKNL+SGS+L+ GFRL GMYVGKGY+ DG++K+
Sbjct: 309 GKELTLTNVLYVPEIRKNLVSGSLLNNHGFRL-----------SGMYVGKGYMSDGMWKL 357
Query: 8 NV 3
NV
Sbjct: 358 NV 359
>emb|CAN69713.1| hypothetical protein VITISV_011261 [Vitis vinifera]
Length = 382
Score = 285 bits (728), Expect = 3e-74
Identities = 151/323 (46%), Positives = 210/323 (65%), Gaps = 1/323 (0%)
Frame = -3
Query: 1097 ETHADEFESYETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISL 918
ET+ E W +SD++C+N ILN LD MY VY + T+KE WE+L+KKYKTED+ +
Sbjct: 61 ETNKKIVAVVEAWKHSDFLCKNYILNGLDKTMYNVYSQVKTSKEXWESLEKKYKTEDVGM 120
Query: 917 KKFIVEKWENYKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDF 738
KK IV ++ +YKMVDS+TV SQVQELQ+IL+++ AE + ES+ VA+I KL PSWKDF
Sbjct: 121 KKSIVGRFLDYKMVDSKTVTSQVQELQIILHELHAEKMELSESFQVAAIVEKLLPSWKDF 180
Query: 737 KCFLRHKKKDINLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVEDSKQKAQXXXXXXX 558
K +L+HK+K++ L++LI LK EEDN +++K +++KAN+VE K +
Sbjct: 181 KNYLKHKRKEMGLEDLIXXLKXEEDNCVSEKKVGKHPMESKANLVEPKANKKR--KHFGE 238
Query: 557 XXXXXXXXXXXXXGTCYNCHKPGHMAKDCR-KDTGKSPQANITEVDGISKDIENIHLSAV 381
G CY C+K GH AK CR K K +A++TE +++ N+ + V
Sbjct: 239 SLSQGKNKYKKFLGKCYICNKQGHRAKXCRLKGQSKENKAHVTE----EEELANMLSALV 294
Query: 380 VSEVNLVTNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVIL 201
+ EVN+V N WWV G TR +C +RN+FSTY + L MGN++ S V GIG+V+L
Sbjct: 295 LFEVNMVDNVNKWWVGMGVTRHVCRERNMFSTYVPVNGRN-LIMGNSATSKVVGIGKVVL 353
Query: 200 KFTSGKDLTLTDVLHVPDIRKNL 132
K TSGK+L LT+VLHVPDI +NL
Sbjct: 354 KMTSGKELVLTNVLHVPDICRNL 376
>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
Length = 1038
Score = 251 bits (640), Expect = 5e-64
Identities = 136/380 (35%), Positives = 207/380 (54%), Gaps = 14/380 (3%)
Frame = -3
Query: 1103 TKETHADEFESYETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDI 924
T + D+ E + + R +LN + M+ +++ +AK++W TL+ +Y +D
Sbjct: 76 TDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDA 135
Query: 923 SLKKFIVEKWENYKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWK 744
KK++V KW ++M D + V Q+ E + ++ ++ +EG + E + K PPSW
Sbjct: 136 GRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVTNVLSEGMKMCEILQANVLLEKFPPSWN 195
Query: 743 DFKCFLRHKKKDINLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVEDS-------KQK 585
D++ L+HKKKD+ L ELI ++ EE NRL DK AN+VE S KQ+
Sbjct: 196 DYRNHLKHKKKDLKLHELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQE 255
Query: 584 A--QXXXXXXXXXXXXXXXXXXXXGTCYNCHKPGHMAKDCRKDTGK-----SPQANITEV 426
+ CY C K GH + C + G+ +PQAN+ E
Sbjct: 256 KGHKGKNSEKRQFKTTGGQIKKKKLVCYVCRKEGHKSYQCNQRKGRPSQKPTPQANLAEQ 315
Query: 425 DGISKDIENIHLSAVVSEVNLVTNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMG 246
D + A + E NL+ N DW +DTGA+R C++R L Y E +FMG
Sbjct: 316 DS--------EIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTVDGECVFMG 367
Query: 245 NASASTVEGIGRVILKFTSGKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVL 66
N++ + V G G+VILK TSGK L+L++VL+VP +R+NL+SGS+L++ G ++V E DK VL
Sbjct: 368 NSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVL 427
Query: 65 TKGGMYVGKGYLCDGLFKVN 6
TK G +VGKGYL +GLF +N
Sbjct: 428 TKNGNFVGKGYLSNGLFVLN 447
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 245 bits (625), Expect = 3e-62
Identities = 133/366 (36%), Positives = 210/366 (57%), Gaps = 11/366 (3%)
Frame = -3
Query: 1067 ETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWEN 888
+ W++++ VCR+T+L+ L ++ VY AK++W++L KY EDI ++F++ K+
Sbjct: 79 DDWIHANKVCRHTLLSVLSNDLFDVYASYKNAKDIWDSLILKYTAEDIVRQRFVIAKYYR 138
Query: 887 YKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKD 708
++M+ + + Q+ E ++ DI+ E + + + + KLP SW D+K L+H++K
Sbjct: 139 WEMIKGKDIKIQINEYHKLIEDIKTESIKLPDEFVSELLIEKLPQSWTDYKQQLKHRQKQ 198
Query: 707 INLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVEDS--------KQKAQXXXXXXXXX 552
++L +LI + +E+ NR + L AKAN++ED K +
Sbjct: 199 MSLSDLITHIIIEDTNRKECAAAKAKALSAKANVIEDKPAPKRYEKKFDHKKKPNNKFSR 258
Query: 551 XXXXXXXXXXXGTCYNCHKPGHMAKDCRKDTGKS--PQANITEVDGISKDIENIHLSAVV 378
G C+ C KPGH A CR P+AN+ E + + AVV
Sbjct: 259 PSGTNPTFKKKGNCFVCGKPGHHAPQCRHRAKNDYPPKANLAEGEDT--------IVAVV 310
Query: 377 SEVNLVTNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*-LFMGNASASTVEGIGRVIL 201
S+VNLVTN W VD+GATR IC++RN+F++Y+ E +++G++ + V G G+V+L
Sbjct: 311 SQVNLVTNVSKWVVDSGATRHICANRNVFTSYTSVGDGEEQVYLGDSRTTPVLGKGKVLL 370
Query: 200 KFTSGKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDG 21
K TSGK L L DVLHVP IR NL+S ++LSK G ++ FESDK V+TK ++VGKGY G
Sbjct: 371 KLTSGKTLALNDVLHVPSIRVNLVSVALLSKVGVKVSFESDKIVITKNNVFVGKGYCDQG 430
Query: 20 LFKVNV 3
LF +N+
Sbjct: 431 LFVLNI 436
>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
Length = 1268
Score = 228 bits (580), Expect = 5e-57
Identities = 128/360 (35%), Positives = 204/360 (56%), Gaps = 10/360 (2%)
Frame = -3
Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
+D + R +++ L + VY+ I + K++W+ L+ K+ D + +++E++ +YKMVD
Sbjct: 27 TDCLFRGALISVLADNIVDVYMHIPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVD 86
Query: 872 SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
R+V Q E+Q+++ ++ + + + I KLPPSW DF L+HK+++ ++ +
Sbjct: 87 DRSVVEQAHEIQMLVKELENNHCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVTD 146
Query: 692 LIEKLKMEEDNRLADKNYFGQFLD--AKANIVE--------DSKQKAQXXXXXXXXXXXX 543
LI L +EE R D G+ ++ + AN+V+ ++ +K +
Sbjct: 147 LIGSLGIEEKARAKDNR--GKKIEGGSSANLVQKKNPHASHNNNKKVKPDVKPKATTNFK 204
Query: 542 XXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNL 363
G C+ C KPGH AKDC + K AN+ IS+D + + V
Sbjct: 205 KKGKGKAKGDCFVCGKPGHWAKDCPERKDKK-SANMV----ISEDGGTLGYGKFLPTVLS 259
Query: 362 VTNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGK 183
V +S DWWVDTGA +C+D +LFS+Y + L MGN S + V G+G V LKFTSGK
Sbjct: 260 VCHSPDWWVDTGANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGK 318
Query: 182 DLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
+ L +V HVP I+KNL+SGS+L + GFRLVFES+K V++K G ++GKGY GLF+ ++
Sbjct: 319 IVQLKNVQHVPSIKKNLVSGSLLCRDGFRLVFESNKCVVSKYGTFIGKGYDSGGLFRFSL 378
>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1448
Score = 225 bits (574), Expect = 2e-56
Identities = 131/361 (36%), Positives = 204/361 (56%), Gaps = 11/361 (3%)
Frame = -3
Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
SD + R +++ L + VY+ + + K++W+ L+ K+ D + +++E++ +YKMVD
Sbjct: 207 SDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVD 266
Query: 872 SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
+R+V Q E+Q++ ++ + + + I KLPPSW DF L+HK+++ ++ +
Sbjct: 267 NRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVSD 326
Query: 692 LIEKLKMEEDNRLADKNYFGQFLD--AKANIVED-------SKQKAQXXXXXXXXXXXXX 540
LI L +EE R D G+ ++ + AN+V+ + +K +
Sbjct: 327 LIGSLGVEEKARAKDVR--GKKVEGCSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKK 384
Query: 539 XXXXXXXGTCYNCHKPGHMAKDC--RKDTGKSPQANITEVDGISKDIENIHLSAVVSEVN 366
G C+ C K GH AKDC RKD KS I+E G S ++ V
Sbjct: 385 KGKGKAKGDCFVCGKSGHWAKDCPERKDR-KSANMVISEGGGTSG------YGKILPTVL 437
Query: 365 LVTNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSG 186
V +S DWWVDTGA +C+D +LFS+Y + L MGN S + V G+G V LKFTSG
Sbjct: 438 SVFHSPDWWVDTGANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSG 496
Query: 185 KDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVN 6
K + L +V HVP I+KNL+SGS+L ++GFRLVFES+K V++K G +VGKGY GLF+ +
Sbjct: 497 KTVQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFS 556
Query: 5 V 3
+
Sbjct: 557 L 557
>gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1453
Score = 225 bits (574), Expect = 2e-56
Identities = 131/359 (36%), Positives = 199/359 (55%), Gaps = 9/359 (2%)
Frame = -3
Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
SD + R +++ L + VY+ + + K++W+ L+ K+ D + +I+E++ +YKMVD
Sbjct: 212 SDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYIMEQFYDYKMVD 271
Query: 872 SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
R+V Q E+Q++ ++ + + + I KLPPSW DF L+HK+++ ++ +
Sbjct: 272 DRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPD 331
Query: 692 LIEKLKMEEDNRLADKNYFGQFLDAKANIVED-------SKQKAQXXXXXXXXXXXXXXX 534
LI L +EE R D + AN+V+ + +K +
Sbjct: 332 LIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKG 391
Query: 533 XXXXXGTCYNCHKPGHMAKDC--RKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNLV 360
G C+ C K GH AKDC RKD KS I+E G S ++ V V
Sbjct: 392 KGKAKGDCFVCGKSGHWAKDCPERKDR-KSANMIISEGGGTSG------YGKILPTVLSV 444
Query: 359 TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGKD 180
+S DWWVDTGA +C+D +LFS+Y + L MGN S + V G+G V LKFTSGK
Sbjct: 445 FHSPDWWVDTGANIHVCADISLFSSY-QVERGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 503
Query: 179 LTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
+ L +V HVP I+KNL+SGS+L ++GFRLVFES+K V++K G +VGKGY GLF+ ++
Sbjct: 504 VQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 562
>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1298
Score = 225 bits (573), Expect = 3e-56
Identities = 130/359 (36%), Positives = 199/359 (55%), Gaps = 9/359 (2%)
Frame = -3
Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
SD + R +++ L + VY+ + + K++W+ L+ K+ D + +++E++ +YKMVD
Sbjct: 172 SDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVD 231
Query: 872 SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
R+V Q E+Q++ ++ + + + I KLPPSW DF L+HK+++ ++ +
Sbjct: 232 DRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPD 291
Query: 692 LIEKLKMEEDNRLADKNYFGQFLDAKANIVED-------SKQKAQXXXXXXXXXXXXXXX 534
LI L +EE R D + AN+V+ + +K +
Sbjct: 292 LIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKS 351
Query: 533 XXXXXGTCYNCHKPGHMAKDC--RKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNLV 360
G C+ C K GH AKDC RKD KS I+E G S ++ V V
Sbjct: 352 KGKAKGDCFVCGKSGHWAKDCPERKDR-KSANMIISEGGGTSG------YGKILPTVLSV 404
Query: 359 TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGKD 180
+S DWWVDTGA +C+D +LFS+Y + L MGN S + V G+G V LKFTSGK
Sbjct: 405 FHSPDWWVDTGANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 463
Query: 179 LTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
+ L +V HVP I+KNL+SGS+L ++GFRLVFES+K V++K G +VGKGY GLF+ ++
Sbjct: 464 VQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 522
>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
Length = 1309
Score = 225 bits (573), Expect = 3e-56
Identities = 129/358 (36%), Positives = 195/358 (54%), Gaps = 5/358 (1%)
Frame = -3
Query: 1061 WMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYK 882
W ++ C + +LN L ++ VY +AK LW L+ ++ D + F E + NYK
Sbjct: 82 WDEANEACLSRLLNVLSNRLFDVYSAFTSAKGLWTDLENEFSEVDNGNESFTTENYLNYK 141
Query: 881 MVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDIN 702
MV+ R+V Q+QE+QL++ D+ G V+ +S+ V +I KLPPSW+DF RH KK +
Sbjct: 142 MVEGRSVMEQLQEIQLLVRDLVQYGCVLPDSFQVNAILAKLPPSWRDFVTSRRHMKKQMT 201
Query: 701 LQELIEKLKMEEDNRLADKNYFGQFLDAKANIVEDS-----KQKAQXXXXXXXXXXXXXX 537
L EL + +EE R ++K +A++VE ++K +
Sbjct: 202 LTELSAAINVEERARSSNK----PSQQLQAHVVEKGGDRKFQKKKKNSPQKNLNQPKSKK 257
Query: 536 XXXXXXGTCYNCHKPGHMAKDCRKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNLVT 357
CY C GH A+ C+ GK P E + + L A + +
Sbjct: 258 MKKKEDFICYVCGVSGHTARRCKLRKGKGPPPQRKEGNVVVNSTPGYALQAF-----MAS 312
Query: 356 NSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGKDL 177
S DWW+D+GAT IC+DR++FS++ F ++ + MGN + V G G+V LK TSGK L
Sbjct: 313 PSDDWWMDSGATVHICADRSMFSSFQGF-NSAPVLMGNGVPAAVRGTGQVYLKLTSGKTL 371
Query: 176 TLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
L DVL+VP + +NLIS S+L ++G +LVFES+K VL+K G +VGK Y GLF+++V
Sbjct: 372 VLKDVLYVPSMSRNLISVSLLCRQGLKLVFESNKVVLSKFGTFVGKSYESGGLFRLSV 429
>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1413
Score = 225 bits (573), Expect = 3e-56
Identities = 130/359 (36%), Positives = 199/359 (55%), Gaps = 9/359 (2%)
Frame = -3
Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
SD + R +++ L + VY+ + + K++W+ L+ K+ D + +++E++ +YKMVD
Sbjct: 172 SDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGISDAGSELYVMEQFYDYKMVD 231
Query: 872 SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
R+V Q E+Q++ ++ + + + I KLPPSW DF L+HK+++ ++ +
Sbjct: 232 DRSVVEQAHEIQMLAKELENNNCELPDKFVAGDIIAKLPPSWSDFATSLKHKRQEFSVPD 291
Query: 692 LIEKLKMEEDNRLADKNYFGQFLDAKANIVED-------SKQKAQXXXXXXXXXXXXXXX 534
LI L +EE R D + AN+V+ + +K +
Sbjct: 292 LIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKS 351
Query: 533 XXXXXGTCYNCHKPGHMAKDC--RKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNLV 360
G C+ C K GH AKDC RKD KS I+E G S ++ V V
Sbjct: 352 KGKAKGDCFVCGKSGHWAKDCPERKDR-KSANMIISEGGGTSG------YGKILPRVLSV 404
Query: 359 TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGKD 180
+S DWWVDTGA +C+D +LFS+Y + L MGN S + V G+G V LKFTSGK
Sbjct: 405 FHSPDWWVDTGANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 463
Query: 179 LTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
+ L +V HVP I+KNL+SGS+L ++GFRLVFES+K V++K G +VGKGY GLF+ ++
Sbjct: 464 VQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 522
>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
Length = 1394
Score = 225 bits (573), Expect = 3e-56
Identities = 130/359 (36%), Positives = 199/359 (55%), Gaps = 9/359 (2%)
Frame = -3
Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
SD + R +++ L + VY+ + + K++W+ L+ K+ D + +++E++ +YKMVD
Sbjct: 153 SDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGISDAGSELYVMEQFYDYKMVD 212
Query: 872 SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
R+V Q E+Q++ ++ + + + I KLPPSW DF L+HK+++ ++ +
Sbjct: 213 DRSVVEQAHEIQMLAKELENNNCELPDKFVAGDIIAKLPPSWSDFATSLKHKRQEFSVPD 272
Query: 692 LIEKLKMEEDNRLADKNYFGQFLDAKANIVED-------SKQKAQXXXXXXXXXXXXXXX 534
LI L +EE R D + AN+V+ + +K +
Sbjct: 273 LIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKS 332
Query: 533 XXXXXGTCYNCHKPGHMAKDC--RKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNLV 360
G C+ C K GH AKDC RKD KS I+E G S ++ V V
Sbjct: 333 KGKAKGDCFVCGKSGHWAKDCPERKDR-KSANMIISEGGGTSG------YGKILPRVLSV 385
Query: 359 TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGKD 180
+S DWWVDTGA +C+D +LFS+Y + L MGN S + V G+G V LKFTSGK
Sbjct: 386 FHSPDWWVDTGANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 444
Query: 179 LTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
+ L +V HVP I+KNL+SGS+L ++GFRLVFES+K V++K G +VGKGY GLF+ ++
Sbjct: 445 VQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 503
>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 224 bits (572), Expect = 4e-56
Identities = 130/359 (36%), Positives = 199/359 (55%), Gaps = 9/359 (2%)
Frame = -3
Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
SD + R +++ L + VY+ + + K++W+ L+ K+ D + +++E++ +YKMVD
Sbjct: 172 SDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVD 231
Query: 872 SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
R+V Q E+Q++ ++ + + + I KLPPSW DF L+HK+++ ++ +
Sbjct: 232 DRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPD 291
Query: 692 LIEKLKMEEDNRLADKNYFGQFLDAKANIVED-------SKQKAQXXXXXXXXXXXXXXX 534
LI L +EE R D + AN+V+ + +K +
Sbjct: 292 LIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKS 351
Query: 533 XXXXXGTCYNCHKPGHMAKDC--RKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNLV 360
G C+ C K GH AKDC RKD KS I+E G S ++ V V
Sbjct: 352 KGKAKGDCFVCGKSGHWAKDCPERKDR-KSANMIISEGGGTSG------YGKILPTVLSV 404
Query: 359 TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGKD 180
+S DWWVDTGA +C+D +LFS+Y + L MGN S + V G+G V LKFTSGK
Sbjct: 405 FHSPDWWVDTGANIHVCADISLFSSY-QVGRGSSLLMGNESLAAVHGVGTVDLKFTSGKT 463
Query: 179 LTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
+ L +V HVP I+KNL+SGS+L ++GFRLVFES+K V++K G +VGKGY GLF+ ++
Sbjct: 464 VQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 522
>gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1268
Score = 224 bits (572), Expect = 4e-56
Identities = 130/359 (36%), Positives = 199/359 (55%), Gaps = 9/359 (2%)
Frame = -3
Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
SD + R +++ L + VY+ + + K++W+ L+ K+ D + +++E++ +YKMVD
Sbjct: 27 SDCLFRGALISVLADNIVDVYMHMPSRKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVD 86
Query: 872 SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
R+V Q E+Q++ ++ + + + I KLPPSW DF L+HK+++ ++ +
Sbjct: 87 DRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPD 146
Query: 692 LIEKLKMEEDNRLADKNYFGQFLDAKANIVED-------SKQKAQXXXXXXXXXXXXXXX 534
LI L +EE R D + AN+V+ + +K +
Sbjct: 147 LIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKS 206
Query: 533 XXXXXGTCYNCHKPGHMAKDC--RKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNLV 360
G C+ C K GH AKDC RKD KS I+E G S ++ V V
Sbjct: 207 KGKAKGDCFVCGKSGHWAKDCPERKDR-KSANMIISEGGGTSG------YGKILPTVLSV 259
Query: 359 TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGKD 180
+S DWWVDTGA +C+D +LFS+Y + L MGN S + V G+G V LKFTSGK
Sbjct: 260 FHSPDWWVDTGANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 318
Query: 179 LTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
+ L +V HVP I+KNL+SGS+L ++GFRLVFES+K V++K G +VGKGY GLF+ ++
Sbjct: 319 VQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 377