BLASTX nr result

ID: Paeonia24_contig00023956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00023956
         (1111 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   371   e-100
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          371   e-100
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854...   367   4e-99
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   367   5e-99
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   364   3e-98
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   355   2e-95
ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628...   296   8e-78
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]   291   3e-76
emb|CAN69713.1| hypothetical protein VITISV_011261 [Vitis vinifera]   285   3e-74
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...   251   5e-64
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               245   3e-62
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...   228   5e-57
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc...   225   2e-56
gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subc...   225   2e-56
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc...   225   3e-56
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   225   3e-56
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc...   225   3e-56
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo...   225   3e-56
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc...   224   4e-56
gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]     224   4e-56

>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  371 bits (953), Expect = e-100
 Identities = 185/362 (51%), Positives = 260/362 (71%), Gaps = 7/362 (1%)
 Frame = -3

Query: 1067 ETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWEN 888
            + W +SD++CRN ++N L   +Y VY     AKELWE+LD+KYKTED   KKF+V ++ +
Sbjct: 90   DAWKHSDFLCRNYVMNGLADSLYNVYSDKKIAKELWESLDRKYKTEDAGAKKFVVGRFLD 149

Query: 887  YKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKD 708
            YKMVDS+TV SQVQELQ+IL++I AEG ++ E++ VA+I  KLPP+WKDFK  L+HK+K+
Sbjct: 150  YKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNCLKHKRKE 209

Query: 707  INLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVE-----DSKQKAQXXXXXXXXXXXX 543
            +++++LI +L++EEDNR ++K       +AKAN VE      +K                
Sbjct: 210  MSIEDLIIRLRIEEDNRRSEKKGVHTLNEAKANFVEHGQSSKAKTNNNKGKGSKLGPKGG 269

Query: 542  XXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSP-QANITEVDGISKDIENIHLSAVVSEVN 366
                    G C+NC K GH + DCR      P +AN+  +D I+K++ NI L+AVVSEVN
Sbjct: 270  ISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANV--IDNITKNVSNIDLTAVVSEVN 327

Query: 365  LV-TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTS 189
            LV +N ++WW+DTGATR +CSD+ +FST+    + E +FMGN++ S ++G G+VILK TS
Sbjct: 328  LVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTS 387

Query: 188  GKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKV 9
            GK+LTLT+VL+VP+IRKNL+SGS+L+  GFRLVFES+KFVL+K GMYVGKGY+ DG++K+
Sbjct: 388  GKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFESNKFVLSKSGMYVGKGYMSDGMWKL 447

Query: 8    NV 3
            NV
Sbjct: 448  NV 449


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  371 bits (952), Expect = e-100
 Identities = 189/366 (51%), Positives = 262/366 (71%), Gaps = 1/366 (0%)
 Frame = -3

Query: 1097 ETHADEFESYETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISL 918
            ET      + + W +SD++C+N ++N L   +Y VY+   TAKELWE+LD+KYKTED   
Sbjct: 81   ETDIQVASAIDAWHHSDFLCKNYVMNGLSDSLYNVYIGKKTAKELWESLDRKYKTEDAGT 140

Query: 917  KKFIVEKWENYKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDF 738
            KKF+V ++ ++KMVDS+TV SQVQELQ+IL++I AEG  + E++ VA+I  KLPP+WKDF
Sbjct: 141  KKFVVGRFLDFKMVDSKTVISQVQELQIILSEILAEGMHLSETFQVAAIIEKLPPAWKDF 200

Query: 737  KCFLRHKKKDINLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVEDSKQKAQXXXXXXX 558
            K +L+HK+K++N++ L+ KL++EEDNR A++   G    AKAN VE   +K +       
Sbjct: 201  KSYLKHKQKEMNIEGLVVKLRIEEDNRNAER--IGAISMAKANFVEHGPKKKK---KKLG 255

Query: 557  XXXXXXXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSPQANITEVDGISKDIENIHLSAVV 378
                         G CYNC K GH A DCR    K  +AN+  V+ I++ + +I+LSAVV
Sbjct: 256  PKGGISKKQTKFQGKCYNCDKMGHKASDCRLPK-KKREANV--VENITQHVSDINLSAVV 312

Query: 377  SEVNLV-TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVIL 201
             EVN+V +N R+WW+DTGATR +CSD+ LF+++   S+ E LFMGN++ S +EG G+V L
Sbjct: 313  LEVNMVGSNPREWWIDTGATRHVCSDKGLFTSFEAASNREKLFMGNSATSEIEGQGKVAL 372

Query: 200  KFTSGKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDG 21
            K TSGK+LTL +VL+VP+IRKNL+SGS+L+K GFR+VFESD  VL+K GMYVGKGY+ DG
Sbjct: 373  KMTSGKELTLNNVLYVPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMYVGKGYVNDG 432

Query: 20   LFKVNV 3
            LFK+NV
Sbjct: 433  LFKLNV 438


>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
            vinifera]
          Length = 478

 Score =  367 bits (943), Expect = 4e-99
 Identities = 182/362 (50%), Positives = 261/362 (72%), Gaps = 7/362 (1%)
 Frame = -3

Query: 1067 ETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWEN 888
            + W +SD++CRN ++N L   +Y VY    TAKELWE+LD+KYKTED   KKF+V ++ +
Sbjct: 90   DAWKHSDFLCRNYVMNGLADSLYNVYSDKKTAKELWESLDRKYKTEDAGAKKFVVGRFLD 149

Query: 887  YKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKD 708
            YKMVDS+TV SQVQELQ+IL++I AEG ++ E++ VA+I  KLPP+WKDFK +L+HK+K+
Sbjct: 150  YKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKE 209

Query: 707  INLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVE-----DSKQKAQXXXXXXXXXXXX 543
            +++++LI +L++EEDNR ++K       +AKAN VE     ++K                
Sbjct: 210  MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSNAKTNNNKGKGSKLGPKGG 269

Query: 542  XXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSP-QANITEVDGISKDIENIHLSAVVSEVN 366
                    G C+NC K GH + DCR      P +AN+  +D I+K++ +I L+ VVSEVN
Sbjct: 270  ISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANV--IDDITKNVYDIDLTTVVSEVN 327

Query: 365  LV-TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTS 189
            LV +N ++WW+DTGATR +CSD+ +FST+    + E +FMGN++ S ++G G+VILK TS
Sbjct: 328  LVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTS 387

Query: 188  GKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKV 9
            GK+LTLT+VL+VP+IRKNL+SGS+L+  GFRLVF+S+K VL+K GMYVGKGY+ DG++K+
Sbjct: 388  GKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFDSNKVVLSKSGMYVGKGYMSDGMWKL 447

Query: 8    NV 3
            NV
Sbjct: 448  NV 449


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  367 bits (942), Expect = 5e-99
 Identities = 183/362 (50%), Positives = 260/362 (71%), Gaps = 7/362 (1%)
 Frame = -3

Query: 1067 ETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWEN 888
            + W +SD++CRN ++N L   +Y VY    TAKELWE+LD+KYKTED   KKF+V ++ +
Sbjct: 90   DAWKHSDFLCRNYVMNGLADSLYNVYSDKKTAKELWESLDRKYKTEDAGAKKFVVGRFLD 149

Query: 887  YKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKD 708
            YKMVDS+TV SQVQELQ+IL++I AEG ++ E++ VA+I  KLPP+WKDFK +L+HK+K+
Sbjct: 150  YKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKE 209

Query: 707  INLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVE-----DSKQKAQXXXXXXXXXXXX 543
            +++++LI +L++EEDNR ++K       +AKAN VE      +K                
Sbjct: 210  MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNNKGKGSKLGPKGG 269

Query: 542  XXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSP-QANITEVDGISKDIENIHLSAVVSEVN 366
                    G C+NC K GH + DCR      P +AN+  +D I+K++ +I L+AVVSEVN
Sbjct: 270  ISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANV--IDDITKNVYDIDLTAVVSEVN 327

Query: 365  LV-TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTS 189
            LV +N ++WW+DTGATR +CSD+ +FST+    + E +FMGN++ S ++G G+VILK TS
Sbjct: 328  LVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTS 387

Query: 188  GKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKV 9
            GK+LTLT+VL+VP+IRKNL+SGS+L+  GFRLVF S+K VL+K GMYVGKGY+ DG++K+
Sbjct: 388  GKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFXSNKVVLSKSGMYVGKGYMSDGMWKL 447

Query: 8    NV 3
            NV
Sbjct: 448  NV 449


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  364 bits (935), Expect = 3e-98
 Identities = 180/362 (49%), Positives = 259/362 (71%), Gaps = 7/362 (1%)
 Frame = -3

Query: 1067 ETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWEN 888
            + W +SD++CRN ++N L   +Y VY    TAKELWE+LD+KYKTED   KKF+V ++ +
Sbjct: 90   DAWKHSDFLCRNYVMNGLTDSLYNVYSDKKTAKELWESLDRKYKTEDAGAKKFVVGRFLD 149

Query: 887  YKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKD 708
            YKMVDS+TV SQVQELQ+IL++I A+G ++ E++ VA+I  KLPP+WKDFK +L+HK+K+
Sbjct: 150  YKMVDSKTVVSQVQELQVILHEIHADGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKE 209

Query: 707  INLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVE-----DSKQKAQXXXXXXXXXXXX 543
            +++++LI +L++EEDNR ++K       +A+AN VE      +K                
Sbjct: 210  MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAQANFVEHGQSSKAKTNNNKGKGSKLGPKGG 269

Query: 542  XXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSP-QANITEVDGISKDIENIHLSAVVSEVN 366
                    G C+NC K GH + DCR      P +AN+  +D I+K++ +I L+ VVSEVN
Sbjct: 270  ISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANV--IDNITKNVSDIDLTTVVSEVN 327

Query: 365  LV-TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTS 189
            LV +N ++WW+DTGATR +CSD+ +FST+    + E +FMGN++ S ++G G+VILK TS
Sbjct: 328  LVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTS 387

Query: 188  GKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKV 9
            GK+LTLT+VL+VP+IRKNL+ GS+L+  GFRLVFES+K VL+K GMYVGKGY+ DG++K+
Sbjct: 388  GKELTLTNVLYVPEIRKNLVFGSLLNNHGFRLVFESNKVVLSKSGMYVGKGYMSDGMWKL 447

Query: 8    NV 3
            NV
Sbjct: 448  NV 449


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  355 bits (911), Expect = 2e-95
 Identities = 181/365 (49%), Positives = 241/365 (66%)
 Frame = -3

Query: 1097 ETHADEFESYETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISL 918
            ET+ ++    + W +SD++CRN +LN LD  +Y VY  + TAKELW++LDKKYKTED  +
Sbjct: 250  ETNKEKVAVVDAWKHSDFLCRNYMLNGLDNTLYNVYCSLKTAKELWDSLDKKYKTEDAGI 309

Query: 917  KKFIVEKWENYKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDF 738
            KKFIV K+ ++KM+DS+TV SQVQELQ+IL++I +EG    +S+ VA++  KLPP WKDF
Sbjct: 310  KKFIVGKFLDFKMIDSKTVISQVQELQVILHEIHSEGMSFSDSFQVAAVIEKLPPLWKDF 369

Query: 737  KCFLRHKKKDINLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVEDSKQKAQXXXXXXX 558
            K +L+HK+K++NL+ELI +L++EEDNR ++K      ++AKAN++E   +  +       
Sbjct: 370  KNYLKHKRKEMNLEELIVRLRIEEDNRKSEKK-GNNSMEAKANVIEQGPKTNKKRKHGDQ 428

Query: 557  XXXXXXXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSPQANITEVDGISKDIENIHLSAVV 378
                         G CYNC K GH + D R                              
Sbjct: 429  NQNQESNVAKKFKGKCYNCGKTGHKSNDYR------------------------------ 458

Query: 377  SEVNLVTNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILK 198
                   N+++WWVDTGATR ICS++ +FSTY     NE LFMGN+S+S +EG G+VILK
Sbjct: 459  -------NTKEWWVDTGATRHICSNKWMFSTYKPVEQNEELFMGNSSSSKIEGRGKVILK 511

Query: 197  FTSGKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGL 18
             TSGK+LTL DVLHVPDI KNL+SGS+LSK GF+LVF SDKFVLTK  M+VGKGYL DGL
Sbjct: 512  MTSGKELTLNDVLHVPDICKNLVSGSLLSKNGFKLVFVSDKFVLTKNEMFVGKGYLSDGL 571

Query: 17   FKVNV 3
            FK+NV
Sbjct: 572  FKMNV 576


>ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628178 [Citrus sinensis]
          Length = 2248

 Score =  296 bits (759), Expect = 8e-78
 Identities = 159/366 (43%), Positives = 227/366 (62%), Gaps = 1/366 (0%)
 Frame = -3

Query: 1097 ETHADEFESYETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISL 918
            ET+     + + W +SD++C+N ++N L   +Y VY+    A ELWE+LD+KYKTED   
Sbjct: 1053 ETNVQVASAIDAWHHSDFLCKNYVMNDLSDSLYNVYIGKKIANELWESLDRKYKTEDA-- 1110

Query: 917  KKFIVEKWENYKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDF 738
                                                G ++ E++ VA+I  KLPP+WKDF
Sbjct: 1111 ------------------------------------GMMLSETFQVAAIIEKLPPTWKDF 1134

Query: 737  KCFLRHKKKDINLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVEDSKQKAQXXXXXXX 558
            K +L+HK K++N++EL+ KL++EEDNR A++   G    AKAN+VE   +  +       
Sbjct: 1135 KSYLKHKCKEMNIEELVVKLRIEEDNRNAER--IGAISMAKANVVEHRPKNKKNKKLGPK 1192

Query: 557  XXXXXXXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSPQANITEVDGISKDIENIHLSAVV 378
                            +NC K GH   DCR    K  + N+  V+ I++ + +I+LSAVV
Sbjct: 1193 GGISKKQTNFQGKY--FNCDKMGHKVSDCRLPK-KKREENV--VENITQHVSDINLSAVV 1247

Query: 377  SEVNLV-TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVIL 201
            SEVNLV +N R+WW+DTGATR +CSD+ LF+++   S+ E LFMGN++ S +EG G VIL
Sbjct: 1248 SEVNLVGSNPREWWIDTGATRHVCSDKGLFTSFETVSNGEKLFMGNSAMSEIEGQGNVIL 1307

Query: 200  KFTSGKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDG 21
            K TSGK+LTL DVL+V +IRKNL+SGS+L+K GF++VFES++ VL+K GMYVGKGY+ DG
Sbjct: 1308 KMTSGKELTLNDVLYVLEIRKNLVSGSLLNKHGFQMVFESNRVVLSKNGMYVGKGYVNDG 1367

Query: 20   LFKVNV 3
            LFK+N+
Sbjct: 1368 LFKLNI 1373


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score =  291 bits (745), Expect = 3e-76
 Identities = 158/362 (43%), Positives = 226/362 (62%), Gaps = 7/362 (1%)
 Frame = -3

Query: 1067 ETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWEN 888
            + W +SD++CRN ++N L   +Y VY    TAKELWE+LD+KYKTED   KKF+V ++ +
Sbjct: 39   DAWKHSDFLCRNYVMNGLADSLYNVYSDKKTAKELWESLDRKYKTEDAGAKKFVVGRFLD 98

Query: 887  YKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKD 708
            YKMVDS+TV        L+L +                     P  WKDFK +L+HK+K+
Sbjct: 99   YKMVDSKTV--------LLLRNY--------------------PLPWKDFKNYLKHKRKE 130

Query: 707  INLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVED-----SKQKAQXXXXXXXXXXXX 543
            +++++LI +L++EEDNR ++K       +AKAN VE      +K                
Sbjct: 131  MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNNKGKGSKLGPKGG 190

Query: 542  XXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSP-QANITEVDGISKDIENIHLSAVVSEVN 366
                    G C+NC K GH + DCR      P +AN+  +D I+K++ +I L+AVVSEVN
Sbjct: 191  ISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANV--IDDITKNVYDIDLTAVVSEVN 248

Query: 365  LV-TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTS 189
            LV +N ++WW+DTGATR +CSD+ +FST+    + E +FMGN++ S ++G G+VILK TS
Sbjct: 249  LVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTS 308

Query: 188  GKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKV 9
            GK+LTLT+VL+VP+IRKNL+SGS+L+  GFRL            GMYVGKGY+ DG++K+
Sbjct: 309  GKELTLTNVLYVPEIRKNLVSGSLLNNHGFRL-----------SGMYVGKGYMSDGMWKL 357

Query: 8    NV 3
            NV
Sbjct: 358  NV 359


>emb|CAN69713.1| hypothetical protein VITISV_011261 [Vitis vinifera]
          Length = 382

 Score =  285 bits (728), Expect = 3e-74
 Identities = 151/323 (46%), Positives = 210/323 (65%), Gaps = 1/323 (0%)
 Frame = -3

Query: 1097 ETHADEFESYETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISL 918
            ET+       E W +SD++C+N ILN LD  MY VY  + T+KE WE+L+KKYKTED+ +
Sbjct: 61   ETNKKIVAVVEAWKHSDFLCKNYILNGLDKTMYNVYSQVKTSKEXWESLEKKYKTEDVGM 120

Query: 917  KKFIVEKWENYKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDF 738
            KK IV ++ +YKMVDS+TV SQVQELQ+IL+++ AE   + ES+ VA+I  KL PSWKDF
Sbjct: 121  KKSIVGRFLDYKMVDSKTVTSQVQELQIILHELHAEKMELSESFQVAAIVEKLLPSWKDF 180

Query: 737  KCFLRHKKKDINLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVEDSKQKAQXXXXXXX 558
            K +L+HK+K++ L++LI  LK EEDN +++K      +++KAN+VE    K +       
Sbjct: 181  KNYLKHKRKEMGLEDLIXXLKXEEDNCVSEKKVGKHPMESKANLVEPKANKKR--KHFGE 238

Query: 557  XXXXXXXXXXXXXGTCYNCHKPGHMAKDCR-KDTGKSPQANITEVDGISKDIENIHLSAV 381
                         G CY C+K GH AK CR K   K  +A++TE     +++ N+  + V
Sbjct: 239  SLSQGKNKYKKFLGKCYICNKQGHRAKXCRLKGQSKENKAHVTE----EEELANMLSALV 294

Query: 380  VSEVNLVTNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVIL 201
            + EVN+V N   WWV  G TR +C +RN+FSTY   +    L MGN++ S V GIG+V+L
Sbjct: 295  LFEVNMVDNVNKWWVGMGVTRHVCRERNMFSTYVPVNGRN-LIMGNSATSKVVGIGKVVL 353

Query: 200  KFTSGKDLTLTDVLHVPDIRKNL 132
            K TSGK+L LT+VLHVPDI +NL
Sbjct: 354  KMTSGKELVLTNVLHVPDICRNL 376


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score =  251 bits (640), Expect = 5e-64
 Identities = 136/380 (35%), Positives = 207/380 (54%), Gaps = 14/380 (3%)
 Frame = -3

Query: 1103 TKETHADEFESYETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDI 924
            T +   D+    E +   +   R  +LN +   M+ +++   +AK++W TL+ +Y  +D 
Sbjct: 76   TDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDA 135

Query: 923  SLKKFIVEKWENYKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWK 744
              KK++V KW  ++M D + V  Q+ E + ++ ++ +EG  + E      +  K PPSW 
Sbjct: 136  GRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVTNVLSEGMKMCEILQANVLLEKFPPSWN 195

Query: 743  DFKCFLRHKKKDINLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVEDS-------KQK 585
            D++  L+HKKKD+ L ELI  ++ EE NRL DK          AN+VE S       KQ+
Sbjct: 196  DYRNHLKHKKKDLKLHELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQE 255

Query: 584  A--QXXXXXXXXXXXXXXXXXXXXGTCYNCHKPGHMAKDCRKDTGK-----SPQANITEV 426
               +                      CY C K GH +  C +  G+     +PQAN+ E 
Sbjct: 256  KGHKGKNSEKRQFKTTGGQIKKKKLVCYVCRKEGHKSYQCNQRKGRPSQKPTPQANLAEQ 315

Query: 425  DGISKDIENIHLSAVVSEVNLVTNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMG 246
            D          + A + E NL+ N  DW +DTGA+R  C++R L   Y      E +FMG
Sbjct: 316  DS--------EIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTVDGECVFMG 367

Query: 245  NASASTVEGIGRVILKFTSGKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVL 66
            N++ + V G G+VILK TSGK L+L++VL+VP +R+NL+SGS+L++ G ++V E DK VL
Sbjct: 368  NSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVL 427

Query: 65   TKGGMYVGKGYLCDGLFKVN 6
            TK G +VGKGYL +GLF +N
Sbjct: 428  TKNGNFVGKGYLSNGLFVLN 447


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  245 bits (625), Expect = 3e-62
 Identities = 133/366 (36%), Positives = 210/366 (57%), Gaps = 11/366 (3%)
 Frame = -3

Query: 1067 ETWMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWEN 888
            + W++++ VCR+T+L+ L   ++ VY     AK++W++L  KY  EDI  ++F++ K+  
Sbjct: 79   DDWIHANKVCRHTLLSVLSNDLFDVYASYKNAKDIWDSLILKYTAEDIVRQRFVIAKYYR 138

Query: 887  YKMVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKD 708
            ++M+  + +  Q+ E   ++ DI+ E   + + +    +  KLP SW D+K  L+H++K 
Sbjct: 139  WEMIKGKDIKIQINEYHKLIEDIKTESIKLPDEFVSELLIEKLPQSWTDYKQQLKHRQKQ 198

Query: 707  INLQELIEKLKMEEDNRLADKNYFGQFLDAKANIVEDS--------KQKAQXXXXXXXXX 552
            ++L +LI  + +E+ NR        + L AKAN++ED         K   +         
Sbjct: 199  MSLSDLITHIIIEDTNRKECAAAKAKALSAKANVIEDKPAPKRYEKKFDHKKKPNNKFSR 258

Query: 551  XXXXXXXXXXXGTCYNCHKPGHMAKDCRKDTGKS--PQANITEVDGISKDIENIHLSAVV 378
                       G C+ C KPGH A  CR        P+AN+ E +          + AVV
Sbjct: 259  PSGTNPTFKKKGNCFVCGKPGHHAPQCRHRAKNDYPPKANLAEGEDT--------IVAVV 310

Query: 377  SEVNLVTNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*-LFMGNASASTVEGIGRVIL 201
            S+VNLVTN   W VD+GATR IC++RN+F++Y+     E  +++G++  + V G G+V+L
Sbjct: 311  SQVNLVTNVSKWVVDSGATRHICANRNVFTSYTSVGDGEEQVYLGDSRTTPVLGKGKVLL 370

Query: 200  KFTSGKDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDG 21
            K TSGK L L DVLHVP IR NL+S ++LSK G ++ FESDK V+TK  ++VGKGY   G
Sbjct: 371  KLTSGKTLALNDVLHVPSIRVNLVSVALLSKVGVKVSFESDKIVITKNNVFVGKGYCDQG 430

Query: 20   LFKVNV 3
            LF +N+
Sbjct: 431  LFVLNI 436


>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  228 bits (580), Expect = 5e-57
 Identities = 128/360 (35%), Positives = 204/360 (56%), Gaps = 10/360 (2%)
 Frame = -3

Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
            +D + R  +++ L   +  VY+ I + K++W+ L+ K+   D   + +++E++ +YKMVD
Sbjct: 27   TDCLFRGALISVLADNIVDVYMHIPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVD 86

Query: 872  SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
             R+V  Q  E+Q+++ ++      + + +    I  KLPPSW DF   L+HK+++ ++ +
Sbjct: 87   DRSVVEQAHEIQMLVKELENNHCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVTD 146

Query: 692  LIEKLKMEEDNRLADKNYFGQFLD--AKANIVE--------DSKQKAQXXXXXXXXXXXX 543
            LI  L +EE  R  D    G+ ++  + AN+V+        ++ +K +            
Sbjct: 147  LIGSLGIEEKARAKDNR--GKKIEGGSSANLVQKKNPHASHNNNKKVKPDVKPKATTNFK 204

Query: 542  XXXXXXXXGTCYNCHKPGHMAKDCRKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNL 363
                    G C+ C KPGH AKDC +   K   AN+     IS+D   +     +  V  
Sbjct: 205  KKGKGKAKGDCFVCGKPGHWAKDCPERKDKK-SANMV----ISEDGGTLGYGKFLPTVLS 259

Query: 362  VTNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGK 183
            V +S DWWVDTGA   +C+D +LFS+Y +      L MGN S + V G+G V LKFTSGK
Sbjct: 260  VCHSPDWWVDTGANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGK 318

Query: 182  DLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
             + L +V HVP I+KNL+SGS+L + GFRLVFES+K V++K G ++GKGY   GLF+ ++
Sbjct: 319  IVQLKNVQHVPSIKKNLVSGSLLCRDGFRLVFESNKCVVSKYGTFIGKGYDSGGLFRFSL 378


>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1448

 Score =  225 bits (574), Expect = 2e-56
 Identities = 131/361 (36%), Positives = 204/361 (56%), Gaps = 11/361 (3%)
 Frame = -3

Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
            SD + R  +++ L   +  VY+ + + K++W+ L+ K+   D   + +++E++ +YKMVD
Sbjct: 207  SDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVD 266

Query: 872  SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
            +R+V  Q  E+Q++  ++      + + +    I  KLPPSW DF   L+HK+++ ++ +
Sbjct: 267  NRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVSD 326

Query: 692  LIEKLKMEEDNRLADKNYFGQFLD--AKANIVED-------SKQKAQXXXXXXXXXXXXX 540
            LI  L +EE  R  D    G+ ++  + AN+V+        + +K +             
Sbjct: 327  LIGSLGVEEKARAKDVR--GKKVEGCSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKK 384

Query: 539  XXXXXXXGTCYNCHKPGHMAKDC--RKDTGKSPQANITEVDGISKDIENIHLSAVVSEVN 366
                   G C+ C K GH AKDC  RKD  KS    I+E  G S          ++  V 
Sbjct: 385  KGKGKAKGDCFVCGKSGHWAKDCPERKDR-KSANMVISEGGGTSG------YGKILPTVL 437

Query: 365  LVTNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSG 186
             V +S DWWVDTGA   +C+D +LFS+Y +      L MGN S + V G+G V LKFTSG
Sbjct: 438  SVFHSPDWWVDTGANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSG 496

Query: 185  KDLTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVN 6
            K + L +V HVP I+KNL+SGS+L ++GFRLVFES+K V++K G +VGKGY   GLF+ +
Sbjct: 497  KTVQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFS 556

Query: 5    V 3
            +
Sbjct: 557  L 557


>gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1453

 Score =  225 bits (574), Expect = 2e-56
 Identities = 131/359 (36%), Positives = 199/359 (55%), Gaps = 9/359 (2%)
 Frame = -3

Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
            SD + R  +++ L   +  VY+ + + K++W+ L+ K+   D   + +I+E++ +YKMVD
Sbjct: 212  SDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYIMEQFYDYKMVD 271

Query: 872  SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
             R+V  Q  E+Q++  ++      + + +    I  KLPPSW DF   L+HK+++ ++ +
Sbjct: 272  DRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPD 331

Query: 692  LIEKLKMEEDNRLADKNYFGQFLDAKANIVED-------SKQKAQXXXXXXXXXXXXXXX 534
            LI  L +EE  R  D         + AN+V+        + +K +               
Sbjct: 332  LIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKG 391

Query: 533  XXXXXGTCYNCHKPGHMAKDC--RKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNLV 360
                 G C+ C K GH AKDC  RKD  KS    I+E  G S          ++  V  V
Sbjct: 392  KGKAKGDCFVCGKSGHWAKDCPERKDR-KSANMIISEGGGTSG------YGKILPTVLSV 444

Query: 359  TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGKD 180
             +S DWWVDTGA   +C+D +LFS+Y +      L MGN S + V G+G V LKFTSGK 
Sbjct: 445  FHSPDWWVDTGANIHVCADISLFSSY-QVERGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 503

Query: 179  LTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
            + L +V HVP I+KNL+SGS+L ++GFRLVFES+K V++K G +VGKGY   GLF+ ++
Sbjct: 504  VQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 562


>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1298

 Score =  225 bits (573), Expect = 3e-56
 Identities = 130/359 (36%), Positives = 199/359 (55%), Gaps = 9/359 (2%)
 Frame = -3

Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
            SD + R  +++ L   +  VY+ + + K++W+ L+ K+   D   + +++E++ +YKMVD
Sbjct: 172  SDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVD 231

Query: 872  SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
             R+V  Q  E+Q++  ++      + + +    I  KLPPSW DF   L+HK+++ ++ +
Sbjct: 232  DRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPD 291

Query: 692  LIEKLKMEEDNRLADKNYFGQFLDAKANIVED-------SKQKAQXXXXXXXXXXXXXXX 534
            LI  L +EE  R  D         + AN+V+        + +K +               
Sbjct: 292  LIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKS 351

Query: 533  XXXXXGTCYNCHKPGHMAKDC--RKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNLV 360
                 G C+ C K GH AKDC  RKD  KS    I+E  G S          ++  V  V
Sbjct: 352  KGKAKGDCFVCGKSGHWAKDCPERKDR-KSANMIISEGGGTSG------YGKILPTVLSV 404

Query: 359  TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGKD 180
             +S DWWVDTGA   +C+D +LFS+Y +      L MGN S + V G+G V LKFTSGK 
Sbjct: 405  FHSPDWWVDTGANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 463

Query: 179  LTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
            + L +V HVP I+KNL+SGS+L ++GFRLVFES+K V++K G +VGKGY   GLF+ ++
Sbjct: 464  VQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 522


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  225 bits (573), Expect = 3e-56
 Identities = 129/358 (36%), Positives = 195/358 (54%), Gaps = 5/358 (1%)
 Frame = -3

Query: 1061 WMNSDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYK 882
            W  ++  C + +LN L   ++ VY    +AK LW  L+ ++   D   + F  E + NYK
Sbjct: 82   WDEANEACLSRLLNVLSNRLFDVYSAFTSAKGLWTDLENEFSEVDNGNESFTTENYLNYK 141

Query: 881  MVDSRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDIN 702
            MV+ R+V  Q+QE+QL++ D+   G V+ +S+ V +I  KLPPSW+DF    RH KK + 
Sbjct: 142  MVEGRSVMEQLQEIQLLVRDLVQYGCVLPDSFQVNAILAKLPPSWRDFVTSRRHMKKQMT 201

Query: 701  LQELIEKLKMEEDNRLADKNYFGQFLDAKANIVEDS-----KQKAQXXXXXXXXXXXXXX 537
            L EL   + +EE  R ++K         +A++VE       ++K +              
Sbjct: 202  LTELSAAINVEERARSSNK----PSQQLQAHVVEKGGDRKFQKKKKNSPQKNLNQPKSKK 257

Query: 536  XXXXXXGTCYNCHKPGHMAKDCRKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNLVT 357
                    CY C   GH A+ C+   GK P     E + +        L A      + +
Sbjct: 258  MKKKEDFICYVCGVSGHTARRCKLRKGKGPPPQRKEGNVVVNSTPGYALQAF-----MAS 312

Query: 356  NSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGKDL 177
             S DWW+D+GAT  IC+DR++FS++  F ++  + MGN   + V G G+V LK TSGK L
Sbjct: 313  PSDDWWMDSGATVHICADRSMFSSFQGF-NSAPVLMGNGVPAAVRGTGQVYLKLTSGKTL 371

Query: 176  TLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
             L DVL+VP + +NLIS S+L ++G +LVFES+K VL+K G +VGK Y   GLF+++V
Sbjct: 372  VLKDVLYVPSMSRNLISVSLLCRQGLKLVFESNKVVLSKFGTFVGKSYESGGLFRLSV 429


>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1413

 Score =  225 bits (573), Expect = 3e-56
 Identities = 130/359 (36%), Positives = 199/359 (55%), Gaps = 9/359 (2%)
 Frame = -3

Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
            SD + R  +++ L   +  VY+ + + K++W+ L+ K+   D   + +++E++ +YKMVD
Sbjct: 172  SDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGISDAGSELYVMEQFYDYKMVD 231

Query: 872  SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
             R+V  Q  E+Q++  ++      + + +    I  KLPPSW DF   L+HK+++ ++ +
Sbjct: 232  DRSVVEQAHEIQMLAKELENNNCELPDKFVAGDIIAKLPPSWSDFATSLKHKRQEFSVPD 291

Query: 692  LIEKLKMEEDNRLADKNYFGQFLDAKANIVED-------SKQKAQXXXXXXXXXXXXXXX 534
            LI  L +EE  R  D         + AN+V+        + +K +               
Sbjct: 292  LIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKS 351

Query: 533  XXXXXGTCYNCHKPGHMAKDC--RKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNLV 360
                 G C+ C K GH AKDC  RKD  KS    I+E  G S          ++  V  V
Sbjct: 352  KGKAKGDCFVCGKSGHWAKDCPERKDR-KSANMIISEGGGTSG------YGKILPRVLSV 404

Query: 359  TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGKD 180
             +S DWWVDTGA   +C+D +LFS+Y +      L MGN S + V G+G V LKFTSGK 
Sbjct: 405  FHSPDWWVDTGANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 463

Query: 179  LTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
            + L +V HVP I+KNL+SGS+L ++GFRLVFES+K V++K G +VGKGY   GLF+ ++
Sbjct: 464  VQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 522


>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1394

 Score =  225 bits (573), Expect = 3e-56
 Identities = 130/359 (36%), Positives = 199/359 (55%), Gaps = 9/359 (2%)
 Frame = -3

Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
            SD + R  +++ L   +  VY+ + + K++W+ L+ K+   D   + +++E++ +YKMVD
Sbjct: 153  SDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGISDAGSELYVMEQFYDYKMVD 212

Query: 872  SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
             R+V  Q  E+Q++  ++      + + +    I  KLPPSW DF   L+HK+++ ++ +
Sbjct: 213  DRSVVEQAHEIQMLAKELENNNCELPDKFVAGDIIAKLPPSWSDFATSLKHKRQEFSVPD 272

Query: 692  LIEKLKMEEDNRLADKNYFGQFLDAKANIVED-------SKQKAQXXXXXXXXXXXXXXX 534
            LI  L +EE  R  D         + AN+V+        + +K +               
Sbjct: 273  LIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKS 332

Query: 533  XXXXXGTCYNCHKPGHMAKDC--RKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNLV 360
                 G C+ C K GH AKDC  RKD  KS    I+E  G S          ++  V  V
Sbjct: 333  KGKAKGDCFVCGKSGHWAKDCPERKDR-KSANMIISEGGGTSG------YGKILPRVLSV 385

Query: 359  TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGKD 180
             +S DWWVDTGA   +C+D +LFS+Y +      L MGN S + V G+G V LKFTSGK 
Sbjct: 386  FHSPDWWVDTGANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 444

Query: 179  LTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
            + L +V HVP I+KNL+SGS+L ++GFRLVFES+K V++K G +VGKGY   GLF+ ++
Sbjct: 445  VQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 503


>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1303

 Score =  224 bits (572), Expect = 4e-56
 Identities = 130/359 (36%), Positives = 199/359 (55%), Gaps = 9/359 (2%)
 Frame = -3

Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
            SD + R  +++ L   +  VY+ + + K++W+ L+ K+   D   + +++E++ +YKMVD
Sbjct: 172  SDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVD 231

Query: 872  SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
             R+V  Q  E+Q++  ++      + + +    I  KLPPSW DF   L+HK+++ ++ +
Sbjct: 232  DRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPD 291

Query: 692  LIEKLKMEEDNRLADKNYFGQFLDAKANIVED-------SKQKAQXXXXXXXXXXXXXXX 534
            LI  L +EE  R  D         + AN+V+        + +K +               
Sbjct: 292  LIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKS 351

Query: 533  XXXXXGTCYNCHKPGHMAKDC--RKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNLV 360
                 G C+ C K GH AKDC  RKD  KS    I+E  G S          ++  V  V
Sbjct: 352  KGKAKGDCFVCGKSGHWAKDCPERKDR-KSANMIISEGGGTSG------YGKILPTVLSV 404

Query: 359  TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGKD 180
             +S DWWVDTGA   +C+D +LFS+Y +      L MGN S + V G+G V LKFTSGK 
Sbjct: 405  FHSPDWWVDTGANIHVCADISLFSSY-QVGRGSSLLMGNESLAAVHGVGTVDLKFTSGKT 463

Query: 179  LTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
            + L +V HVP I+KNL+SGS+L ++GFRLVFES+K V++K G +VGKGY   GLF+ ++
Sbjct: 464  VQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 522


>gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  224 bits (572), Expect = 4e-56
 Identities = 130/359 (36%), Positives = 199/359 (55%), Gaps = 9/359 (2%)
 Frame = -3

Query: 1052 SDYVCRNTILNALDGVMYKVYLPIATAKELWETLDKKYKTEDISLKKFIVEKWENYKMVD 873
            SD + R  +++ L   +  VY+ + + K++W+ L+ K+   D   + +++E++ +YKMVD
Sbjct: 27   SDCLFRGALISVLADNIVDVYMHMPSRKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVD 86

Query: 872  SRTVYSQVQELQLILNDIRAEGYVIGESYAVASIAGKLPPSWKDFKCFLRHKKKDINLQE 693
             R+V  Q  E+Q++  ++      + + +    I  KLPPSW DF   L+HK+++ ++ +
Sbjct: 87   DRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPD 146

Query: 692  LIEKLKMEEDNRLADKNYFGQFLDAKANIVED-------SKQKAQXXXXXXXXXXXXXXX 534
            LI  L +EE  R  D         + AN+V+        + +K +               
Sbjct: 147  LIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKS 206

Query: 533  XXXXXGTCYNCHKPGHMAKDC--RKDTGKSPQANITEVDGISKDIENIHLSAVVSEVNLV 360
                 G C+ C K GH AKDC  RKD  KS    I+E  G S          ++  V  V
Sbjct: 207  KGKAKGDCFVCGKSGHWAKDCPERKDR-KSANMIISEGGGTSG------YGKILPTVLSV 259

Query: 359  TNSRDWWVDTGATRRICSDRNLFSTYSKFSHNE*LFMGNASASTVEGIGRVILKFTSGKD 180
             +S DWWVDTGA   +C+D +LFS+Y +      L MGN S + V G+G V LKFTSGK 
Sbjct: 260  FHSPDWWVDTGANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 318

Query: 179  LTLTDVLHVPDIRKNLISGSILSKKGFRLVFESDKFVLTKGGMYVGKGYLCDGLFKVNV 3
            + L +V HVP I+KNL+SGS+L ++GFRLVFES+K V++K G +VGKGY   GLF+ ++
Sbjct: 319  VQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 377


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