BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00023787
         (290 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ...    74   2e-11
ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854...    73   5e-11
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop...    73   5e-11
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein...    72   6e-11
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...    72   6e-11
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein...    72   8e-11
ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prun...    72   8e-11
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein...    72   8e-11
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote...    71   1e-10
ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein...    71   2e-10
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein...    71   2e-10
ref|XP_004302289.1| PREDICTED: RNA polymerase-associated protein...    69   5e-10
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...    69   5e-10
gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Mimulus...    69   7e-10
ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein...    69   7e-10
gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryz...    69   7e-10
gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indi...    69   7e-10
gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japo...    69   7e-10
ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group] g...    69   7e-10
ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis th...    68   1e-09

>ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao]
           gi|590624750|ref|XP_007025692.1| PAF1 complex component
           isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1|
           PAF1 complex component isoform 1 [Theobroma cacao]
           gi|508781058|gb|EOY28314.1| PAF1 complex component
           isoform 1 [Theobroma cacao]
          Length = 660

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 35/38 (92%), Positives = 37/38 (97%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEATVGC+VPE+DGRRHALTLTVSDYKRRRGLL
Sbjct: 623 ARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGLL 660


>ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854406 [Vitis vinifera]
          Length = 493

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEATVGC+VPE+DGRRHALTLTV DYKRRRGLL
Sbjct: 456 ARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRRGLL 493


>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
           gi|222848649|gb|EEE86196.1| plus-3 domain-containing
           family protein [Populus trichocarpa]
          Length = 662

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEATVGC+VPE+DGRRHALTLTV DYKRRRGLL
Sbjct: 625 ARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRRGLL 662


>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
           X1 [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
           PREDICTED: RNA polymerase-associated protein RTF1
           homolog isoform X2 [Citrus sinensis]
          Length = 643

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEATVGC+VPE+DGRRHALTLTV DYKRRRGLL
Sbjct: 606 ARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
           gi|557524836|gb|ESR36142.1| hypothetical protein
           CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEATVGC+VPE+DGRRHALTLTV DYKRRRGLL
Sbjct: 606 ARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
           tuberosum]
          Length = 652

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEATVGC VPE+DGRRHALTL+VSDYKRRRGLL
Sbjct: 615 ARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 652


>ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
           gi|462413781|gb|EMJ18830.1| hypothetical protein
           PRUPE_ppa002666mg [Prunus persica]
          Length = 646

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEATVGC+VPE+DGRRHALTLTVSDYKRR GLL
Sbjct: 609 ARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 646


>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
           [Solanum lycopersicum] gi|460374083|ref|XP_004232841.1|
           PREDICTED: RNA polymerase-associated protein RTF1
           homolog isoform 2 [Solanum lycopersicum]
          Length = 645

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEATVGC VPE+DGRRHALTL+VSDYKRRRGLL
Sbjct: 608 ARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 645


>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus
           notabilis]
          Length = 658

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEATVGC+VPE+DGRRHALTL+V DYKRRRGLL
Sbjct: 621 ARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRGLL 658


>ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
           vesca subsp. vesca]
          Length = 619

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEATVG +VPEDDGRRHALTL+VSDYKRRRGLL
Sbjct: 582 ARKQRIEATVGVRVPEDDGRRHALTLSVSDYKRRRGLL 619


>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
           vesca subsp. vesca]
          Length = 657

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEATVG +VPEDDGRRHALTL+VSDYKRRRGLL
Sbjct: 620 ARKQRIEATVGVRVPEDDGRRHALTLSVSDYKRRRGLL 657


>ref|XP_004302289.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
           vesca subsp. vesca]
          Length = 679

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEAT+G KVPEDDG+RHALTL+VSDYKRRRGLL
Sbjct: 642 ARKQKIEATLGYKVPEDDGKRHALTLSVSDYKRRRGLL 679


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
           sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
           polymerase-associated protein RTF1 homolog [Cucumis
           sativus]
          Length = 660

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEATVG +VPE+DGRRHALTLTVSDYKRRRGLL
Sbjct: 623 ARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660


>gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Mimulus guttatus]
          Length = 606

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEAT+G KVPE+DGRRHALTL+VSDYKRRRGLL
Sbjct: 569 ARKQRIEATLGVKVPENDGRRHALTLSVSDYKRRRGLL 606


>ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Oryza
           brachyantha]
          Length = 645

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEAT+G KVP++DGRRHALTLTVSDYKRRRGLL
Sbjct: 608 ARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 645


>gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryza sativa Japonica
           Group] gi|77556035|gb|ABA98831.1| Plus-3 domain
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|215697432|dbj|BAG91426.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 522

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEAT+G KVP++DGRRHALTLTVSDYKRRRGLL
Sbjct: 485 ARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 522


>gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indica Group]
          Length = 780

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEAT+G KVP++DGRRHALTLTVSDYKRRRGLL
Sbjct: 743 ARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 780


>gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japonica Group]
          Length = 653

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEAT+G KVP++DGRRHALTLTVSDYKRRRGLL
Sbjct: 616 ARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 653


>ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group]
           gi|113649443|dbj|BAF29955.1| Os12g0535900, partial
           [Oryza sativa Japonica Group]
          Length = 599

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ IEAT+G KVP++DGRRHALTLTVSDYKRRRGLL
Sbjct: 562 ARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 599


>ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis thaliana]
           gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein;
           78902-80833 [Arabidopsis thaliana]
           gi|332195649|gb|AEE33770.1| Paf1C-like transcription
           factor [Arabidopsis thaliana]
          Length = 643

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 31/38 (81%), Positives = 35/38 (92%)
 Frame = +2

Query: 2   ARKQMIEATVGCKVPEDDGRRHALTLTVSDYKRRRGLL 115
           ARKQ+ EATVGC+V E+DG+RH LTLTVSDYKRRRGLL
Sbjct: 606 ARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 643