BLASTX nr result

ID: Paeonia24_contig00021029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00021029
         (557 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635931.1| Cellular nucleic acid-binding protein [Medic...    60   3e-07
ref|XP_004289393.1| PREDICTED: uncharacterized protein LOC101308...    59   1e-06
ref|XP_003605727.1| Cellular nucleic acid-binding protein [Medic...    55   9e-06

>ref|XP_003635931.1| Cellular nucleic acid-binding protein [Medicago truncatula]
           gi|355501866|gb|AES83069.1| Cellular nucleic
           acid-binding protein [Medicago truncatula]
          Length = 558

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
 Frame = +1

Query: 115 RMIKTLQDSQLTKFKNADWLIDADH*IRDIERAFQVMHCTAVDKSKLKAHYLSDSARQRW 294
           RM++T   +    FK       A + ++++ER F+VM C+ V K +  AH L++ A   W
Sbjct: 77  RMLETFLRNHPPTFKERYDPDGAQNWLKEVERVFRVMQCSEVQKVRFGAHMLAEEAEDWW 136

Query: 295 E--LIQAEVDP*MYTWTQFRTHLYNRYFSTIEGQQLKREFNNIAQKPDESIA*YLSRFFE 468
              L   E D    TW  FR    NRYF      + + EF  + Q  D S+  Y+++F E
Sbjct: 137 VSLLPILEQDGVAVTWAVFRREFLNRYFPEDVRGKKEIEFLELKQ-GDMSVTEYVAKFVE 195

Query: 469 LYKF 480
           L KF
Sbjct: 196 LAKF 199


>ref|XP_004289393.1| PREDICTED: uncharacterized protein LOC101308717 [Fragaria vesca
           subsp. vesca]
          Length = 344

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 36/110 (32%), Positives = 55/110 (50%)
 Frame = +1

Query: 166 DWLIDADH*IRDIERAFQVMHCTAVDKSKLKAHYLSDSARQRWELIQAEVDP*MYTWTQF 345
           D+L+ ADH I DIE  F ++ CT ++K ++    L D AR  W  ++   D     W  F
Sbjct: 73  DYLV-ADHWIEDIETYFTMITCTEIEKMRIATFLLKDEARAWWSGVERSQDVTALPWEGF 131

Query: 346 RTHLYNRYFSTIEGQQLKREFNNIAQKPDESIA*YLSRFFELYKFVSLVD 495
                 +YF     +QL+ EF  + Q    S+  Y +RF +LY+F   +D
Sbjct: 132 VQLFREKYFPDTVREQLELEFIALVQGM-MSVRDYEARFSQLYRFAREMD 180


>ref|XP_003605727.1| Cellular nucleic acid-binding protein [Medicago truncatula]
           gi|355506782|gb|AES87924.1| Cellular nucleic
           acid-binding protein [Medicago truncatula]
          Length = 458

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
 Frame = +1

Query: 193 IRDIERAFQVMHCTAVDKSKLKAHYLSDSARQRWE--LIQAEVDP*MYTWTQFRTHLYNR 366
           ++++ER F+VM C+ V K +   H L++ A   W   L   E D  + TW  FR    NR
Sbjct: 60  LKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVSLLPVLEQDGAVVTWAVFRREFLNR 119

Query: 367 YFSTIEGQQLKREFNNIAQKPDESIA*YLSRFFELYKF 480
           YF      + + EF  + Q  D S+  Y ++F EL KF
Sbjct: 120 YFPEDVRGKKEIEFLELKQ-GDMSVTEYAAKFVELAKF 156


Top