BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00020992
         (903 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi...   357   5e-96
ref|XP_007019173.1| Tetratricopeptide repeat (TPR)-like superfam...   356   8e-96
ref|XP_007224224.1| hypothetical protein PRUPE_ppa017885mg [Prun...   346   6e-93
ref|XP_006340242.1| PREDICTED: pentatricopeptide repeat-containi...   345   1e-92
ref|XP_004300124.1| PREDICTED: pentatricopeptide repeat-containi...   340   3e-91
ref|XP_007137466.1| hypothetical protein PHAVU_009G129200g [Phas...   339   8e-91
ref|XP_002889139.1| pentatricopeptide repeat-containing protein ...   338   1e-90
ref|XP_006581591.1| PREDICTED: pentatricopeptide repeat-containi...   338   2e-90
ref|XP_004251179.1| PREDICTED: pentatricopeptide repeat-containi...   336   8e-90
gb|EYU18727.1| hypothetical protein MIMGU_mgv1a027101mg [Mimulus...   335   1e-89
gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thal...   334   2e-89
ref|NP_177860.2| pentatricopeptide repeat-containing protein [Ar...   334   2e-89
ref|XP_006434266.1| hypothetical protein CICLE_v10000990mg [Citr...   332   1e-88
ref|XP_006472835.1| PREDICTED: pentatricopeptide repeat-containi...   330   4e-88
ref|XP_002307458.2| pentatricopeptide repeat-containing family p...   329   8e-88
ref|XP_003526650.2| PREDICTED: pentatricopeptide repeat-containi...   327   3e-87
ref|XP_004502524.1| PREDICTED: pentatricopeptide repeat-containi...   327   3e-87
ref|XP_006301167.1| hypothetical protein CARUB_v10021564mg, part...   326   9e-87
ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containi...   322   2e-85
ref|XP_002520317.1| pentatricopeptide repeat-containing protein,...   320   5e-85

>ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Vitis vinifera]
          Length = 476

 Score =  357 bits (915), Expect = 5e-96
 Identities = 178/221 (80%), Positives = 196/221 (88%), Gaps = 1/221 (0%)
 Frame = -1

Query: 663 SSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVEDVLKRFENAGMLAYQ 484
           SS E IK+T+D TK ICK+M+SCPK  LDT L++SGIRVSP +VE+VLKRFENAGMLAYQ
Sbjct: 3   SSGEIIKETADPTKRICKIMISCPKLELDTSLSESGIRVSPIVVENVLKRFENAGMLAYQ 62

Query: 483 FFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCIIIRKYA 304
           FFEWAGKQRNY HSIRAYHTMIESLAKIRQYQIMWDLVN MRS  +LNVETFCII+RKYA
Sbjct: 63  FFEWAGKQRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVETFCIIMRKYA 122

Query: 303 RTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFIPDSKT 124
           R+QKV+EAVYTFN+MEKYDVPPNLAAFN LLSALCKSKNV KAQEIF+ MKD+FIPDSKT
Sbjct: 123 RSQKVKEAVYTFNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFIPDSKT 182

Query: 123 YSILLEGWGKAPNLPKAREIFDNMKDRFI-PDSKTYSILLE 4
           YSILLEGWGKAPNLPKAREIF  M D    PD  TY I+++
Sbjct: 183 YSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVD 223



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
 Frame = -1

Query: 441 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVE-TFCIIIRKYARTQKVEEAVYTFN 265
           I  Y  M++ L K  +      +V  M S+        + +++  Y    ++E+AVYTF 
Sbjct: 215 IVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFL 274

Query: 264 VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAP 88
            ME+ ++  ++A +N L+ A CK   ++ A  + + M  + I P+S+T +I+L       
Sbjct: 275 DMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCG 334

Query: 87  NLPKAREIFDNMKDRFIPDSKTYSILLE 4
           +  +A  +F  M     PD+ TY+++++
Sbjct: 335 DTDEAFRVFRRMIKVCDPDADTYTMMIK 362


>ref|XP_007019173.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|590599410|ref|XP_007019174.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
           gi|590599414|ref|XP_007019175.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|590599418|ref|XP_007019176.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
           gi|590599423|ref|XP_007019177.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508724501|gb|EOY16398.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508724502|gb|EOY16399.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508724503|gb|EOY16400.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508724504|gb|EOY16401.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508724505|gb|EOY16402.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 480

 Score =  356 bits (913), Expect = 8e-96
 Identities = 179/241 (74%), Positives = 201/241 (83%), Gaps = 1/241 (0%)
 Frame = -1

Query: 723 VLHCYSNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVS 544
           V  C+ NKL L  +VL R   SSE  +D  D++K ICK+MMS     L+T L+QSG+RV 
Sbjct: 4   VFKCH-NKLLLGWIVLVRRSYSSEPTRDVLDTSKKICKIMMSSSPVVLNTALDQSGLRVP 62

Query: 543 PDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNS 364
           P++VEDVLKRFENAGMLAY+FFEWA KQRNY+HSIRAYHTMIESLAKIRQYQIMWDLVN 
Sbjct: 63  PEVVEDVLKRFENAGMLAYRFFEWAEKQRNYMHSIRAYHTMIESLAKIRQYQIMWDLVNK 122

Query: 363 MRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNV 184
           MR+  MLNVETFCII+R+YAR QKVEE VYTFN+MEKYDVPPNLAAFNGLLS LCKSKNV
Sbjct: 123 MRNKSMLNVETFCIIMRRYARVQKVEETVYTFNIMEKYDVPPNLAAFNGLLSTLCKSKNV 182

Query: 183 RKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFDNMKDRFI-PDSKTYSILL 7
           RKAQEIFD MKDRF+PDSKTYSILLEGWG+APNLPKAREIF  M D    PD  TY I++
Sbjct: 183 RKAQEIFDKMKDRFVPDSKTYSILLEGWGRAPNLPKAREIFREMVDMGCDPDIVTYGIMV 242

Query: 6   E 4
           +
Sbjct: 243 D 243



 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 35/148 (23%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -1

Query: 441 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVE-TFCIIIRKYARTQKVEEAVYTFN 265
           I  Y  M++ L K  +     ++V  M SNG       + +++  Y    ++E+AV  F 
Sbjct: 235 IVTYGIMVDILCKSGRVDEAIEIVREMDSNGCRPTSFIYSVLVHTYGIENRIEDAVDAFL 294

Query: 264 VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAP 88
            ME+  +  ++  +N L+ A CK   ++    + + M  + + P+++T +I+L       
Sbjct: 295 EMERNGIKADVVVYNALIGAFCKVNKLKNVYRVLNEMDSKGVAPNARTCNIILNSLIGRG 354

Query: 87  NLPKAREIFDNMKDRFIPDSKTYSILLE 4
              +A ++F  M     PD+ TY+I+++
Sbjct: 355 ETDEAFKVFRRMIKECEPDADTYTIMIK 382


>ref|XP_007224224.1| hypothetical protein PRUPE_ppa017885mg [Prunus persica]
           gi|462421160|gb|EMJ25423.1| hypothetical protein
           PRUPE_ppa017885mg [Prunus persica]
          Length = 464

 Score =  346 bits (888), Expect = 6e-93
 Identities = 169/227 (74%), Positives = 194/227 (85%), Gaps = 1/227 (0%)
 Frame = -1

Query: 681 VLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVEDVLKRFENA 502
           +L+R YSSSE I+  SD TK ICK+MMSCP   LDT L+QSGIR+SP++VE+VL RF+NA
Sbjct: 1   MLSRKYSSSEHIRQFSDPTKAICKIMMSCPTLALDTALDQSGIRISPEMVEEVLMRFQNA 60

Query: 501 GMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCI 322
           GM+AY+FFEWAGKQRNY HS++AYH MIESLAKIRQYQIMW+LVNSMR+  M N+ETF I
Sbjct: 61  GMVAYRFFEWAGKQRNYTHSVKAYHAMIESLAKIRQYQIMWELVNSMRAKRMQNMETFSI 120

Query: 321 IIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRF 142
           I+RKYAR QKVEEA+YTFNVMEKYD  PNLAAFNGLLSALCKSKNVRKAQEIFD MKDRF
Sbjct: 121 IMRKYARAQKVEEALYTFNVMEKYDCAPNLAAFNGLLSALCKSKNVRKAQEIFDKMKDRF 180

Query: 141 IPDSKTYSILLEGWGKAPNLPKAREIFDNMKDRFI-PDSKTYSILLE 4
            PDSKTYSIL++GWGK PNLPKARE+F  M D    PD  TY I+++
Sbjct: 181 EPDSKTYSILIDGWGKDPNLPKAREVFREMTDAGCNPDIVTYGIMVD 227



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 46/247 (18%), Positives = 103/247 (41%), Gaps = 21/247 (8%)
 Frame = -1

Query: 681 VLTRLYSSSETIKDT----SDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVEDVLKR 514
           ++ R Y+ ++ +++     +   K  C   ++     L  +     +R + +I + +  R
Sbjct: 120 IIMRKYARAQKVEEALYTFNVMEKYDCAPNLAAFNGLLSALCKSKNVRKAQEIFDKMKDR 179

Query: 513 FENAGMLAYQFFEWAGKQRNYVHS---------------IRAYHTMIESLAKIRQYQIMW 379
           FE          +  GK  N   +               I  Y  M++ L K  +     
Sbjct: 180 FEPDSKTYSILIDGWGKDPNLPKAREVFREMTDAGCNPDIVTYGIMVDVLCKAGRVDEAI 239

Query: 378 DLVNSMRSNGMLNVE-TFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSAL 202
           ++V  M  +G       + +++  Y    ++E+AV  F  ME+  +  ++  +N L+ A 
Sbjct: 240 EIVRGMDDSGCTPTSFIYSVLVHTYGVEHRIEDAVDAFLEMERNGIKADVVVYNALIGAF 299

Query: 201 CKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAPNLPKAREIFDNMKDRFIPDSK 25
           CK+   +    + ++M  + + P+S+T +I+L          +A  +F  M     PD+ 
Sbjct: 300 CKANKFKNVYRVLNDMDSKGVKPNSRTCNIILNSLIDRGETDEAFSVFRKMIKLCEPDAD 359

Query: 24  TYSILLE 4
           TY+++++
Sbjct: 360 TYTMMIK 366


>ref|XP_006340242.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Solanum tuberosum]
          Length = 478

 Score =  345 bits (885), Expect = 1e-92
 Identities = 165/241 (68%), Positives = 201/241 (83%), Gaps = 1/241 (0%)
 Frame = -1

Query: 723 VLHCYSNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVS 544
           +L  + +KLC + ++ TR+YSS ET++   D    +CK+MMSCPK+GLDT L+QSGIRV 
Sbjct: 1   MLRQFHHKLCDRTMIFTRMYSSKETMEVKLDPLTRLCKIMMSCPKAGLDTELDQSGIRVL 60

Query: 543 PDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNS 364
           P++VEDVLKRFENAGMLAY+FFEWAGKQ NY HS RAYH+MI SLAKIRQYQ+MWDLVN 
Sbjct: 61  PEMVEDVLKRFENAGMLAYRFFEWAGKQHNYEHSTRAYHSMIGSLAKIRQYQMMWDLVNE 120

Query: 363 MRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNV 184
           M++  MLN+ETFCII+RKYAR QKVEE +YTF++M K+DVPPNLAAFNGLLSALCKSKNV
Sbjct: 121 MKTKRMLNIETFCIIMRKYARAQKVEETLYTFHIMNKFDVPPNLAAFNGLLSALCKSKNV 180

Query: 183 RKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFDNMKDRFI-PDSKTYSILL 7
            KAQEIFD+ K+ F PDSKTYSIL+EGWG+APNLPKARE++  M +    PD  TY I++
Sbjct: 181 EKAQEIFDSKKNEFTPDSKTYSILIEGWGRAPNLPKAREVYREMIEAGCNPDIVTYGIMV 240

Query: 6   E 4
           +
Sbjct: 241 D 241



 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 37/148 (25%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
 Frame = -1

Query: 441 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVE-TFCIIIRKYARTQKVEEAVYTFN 265
           I  Y  M++ L K  +     ++V  M  +G       + +++  Y    ++E+A+ TF 
Sbjct: 233 IVTYGIMVDILCKAGRVDEAVEIVKEMDFSGCRPTSFIYSVLVHTYGLENRIEDAIDTFL 292

Query: 264 VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAP 88
            MEK  V  ++A +N L+SA CK    +    + ++M+ + + P+++T +I+L G     
Sbjct: 293 EMEKNGVEADVAVYNSLISAFCKVNKFQNVYMVLNDMQFKGVTPNARTCNIILSGLIARG 352

Query: 87  NLPKAREIFDNMKDRFIPDSKTYSILLE 4
               A ++F  M     PD+ TY+++++
Sbjct: 353 ETDDAFKVFRRMLKICDPDADTYTMMIK 380


>ref|XP_004300124.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 484

 Score =  340 bits (873), Expect = 3e-91
 Identities = 168/247 (68%), Positives = 202/247 (81%), Gaps = 2/247 (0%)
 Frame = -1

Query: 738 LDKMIVLHCYSNKLCLQRLVLTRLYSSSETIKDTSDS-TKGICKVMMSCPKSGLDTVLNQ 562
           ++ +I +     KL  + +VL+R YSS E  +  +D  TK ICK+MMSCP   LDT L+Q
Sbjct: 1   MNMIIKIKSCGEKLGFRWMVLSRNYSSCEATRHIADDPTKRICKIMMSCPTLALDTALDQ 60

Query: 561 SGIRVSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIM 382
           SG+R+SP+IVEDVL RF+NAGM+AY+FFEWAGKQRNY HS++AYH MI+SLAKIRQYQIM
Sbjct: 61  SGVRISPEIVEDVLVRFKNAGMVAYRFFEWAGKQRNYTHSVKAYHAMIDSLAKIRQYQIM 120

Query: 381 WDLVNSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSAL 202
           W+LVNSMR+  M N+ETF II+RKYAR QKVEEA+YTFNVMEKYD  PNLAAFN LLSAL
Sbjct: 121 WELVNSMRTQRMQNMETFSIIMRKYARAQKVEEALYTFNVMEKYDCAPNLAAFNDLLSAL 180

Query: 201 CKSKNVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFDNMKDR-FIPDSK 25
           CKSKNVRKAQEIFD MKDRF+PDSKT+SIL++GWGK PNLPKARE++  M D   IPD  
Sbjct: 181 CKSKNVRKAQEIFDKMKDRFVPDSKTFSILIDGWGKDPNLPKAREVYREMVDAGCIPDIV 240

Query: 24  TYSILLE 4
           TY I+++
Sbjct: 241 TYGIMVD 247



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 49/247 (19%), Positives = 106/247 (42%), Gaps = 21/247 (8%)
 Frame = -1

Query: 681 VLTRLYSSSETIKDT----SDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVEDVLKR 514
           ++ R Y+ ++ +++     +   K  C   ++     L  +     +R + +I + +  R
Sbjct: 140 IIMRKYARAQKVEEALYTFNVMEKYDCAPNLAAFNDLLSALCKSKNVRKAQEIFDKMKDR 199

Query: 513 FENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIES--LAKIRQYQIMWD------------ 376
           F           +  GK  N   +   Y  M+++  +  I  Y IM D            
Sbjct: 200 FVPDSKTFSILIDGWGKDPNLPKAREVYREMVDAGCIPDIVTYGIMVDVLCKAGRVDEGI 259

Query: 375 -LVNSMRSNGMLNVE-TFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSAL 202
            +V  M ++G +     + +++  Y    ++E+AV  F  ME+  +  ++A +N L+ A 
Sbjct: 260 EIVRGMVASGCMPTSFIYSVLVHTYGVEDRIEDAVEAFLEMERNGIKADVAIYNALIGAF 319

Query: 201 CKSKNVRKAQEIFDNMKDR-FIPDSKTYSILLEGWGKAPNLPKAREIFDNMKDRFIPDSK 25
           CK    +    +  +MK +  +P+S+T +I+L          +A  +F  M     PD+ 
Sbjct: 320 CKVNKFKNVYRVLSDMKSKAVVPNSRTCNIILHSLIDRGETDEAFSVFRKMIKICDPDAD 379

Query: 24  TYSILLE 4
           TY+++++
Sbjct: 380 TYTMMIK 386


>ref|XP_007137466.1| hypothetical protein PHAVU_009G129200g [Phaseolus vulgaris]
           gi|593328080|ref|XP_007137467.1| hypothetical protein
           PHAVU_009G129200g [Phaseolus vulgaris]
           gi|561010553|gb|ESW09460.1| hypothetical protein
           PHAVU_009G129200g [Phaseolus vulgaris]
           gi|561010554|gb|ESW09461.1| hypothetical protein
           PHAVU_009G129200g [Phaseolus vulgaris]
          Length = 480

 Score =  339 bits (870), Expect = 8e-91
 Identities = 164/243 (67%), Positives = 202/243 (83%), Gaps = 1/243 (0%)
 Frame = -1

Query: 729 MIVLHCYSNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIR 550
           MI L  +  K+  + ++  +++S+SE I++  ++++ + KVMM+CP  GLDT LNQ+G+R
Sbjct: 1   MIKLCSHRKKILSEWVLFAKMHSTSEAIQEVGEASERVSKVMMTCPTLGLDTALNQTGVR 60

Query: 549 VSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLV 370
           VSPD+VE+VLKRFENAGM A++FFEW+ KQR Y HSIRAYH MIESLAKIRQYQI+WDLV
Sbjct: 61  VSPDLVENVLKRFENAGMSAFRFFEWSEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLV 120

Query: 369 NSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSK 190
           N+MR  GMLNVETFCI++RKYAR  KV+EAVYTFNVM+KYDV PNLAAFNGLLSALCKS 
Sbjct: 121 NAMRKKGMLNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSN 180

Query: 189 NVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFDNM-KDRFIPDSKTYSI 13
           NVRKAQEIFD MK RF+PD+KTYSILLEGWGKAPNLP+ARE+F  M +    PD  TY I
Sbjct: 181 NVRKAQEIFDAMKSRFVPDAKTYSILLEGWGKAPNLPRAREVFGEMVRAGCDPDVVTYGI 240

Query: 12  LLE 4
           +++
Sbjct: 241 MVD 243


>ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334980|gb|EFH65398.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 482

 Score =  338 bits (868), Expect = 1e-90
 Identities = 160/235 (68%), Positives = 197/235 (83%), Gaps = 1/235 (0%)
 Frame = -1

Query: 705 NKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVED 526
           ++LC +  +  RLYSSSE ++D +D  K I KV+MS P+  +D+ L+QSG+RVSP++VED
Sbjct: 11  SRLCSKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVIDSALDQSGLRVSPEVVED 70

Query: 525 VLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGM 346
           VL RF NAG+LAY+FF+W+ KQR+Y HS+RAYH MIES AKIRQY++MWDL+N+M    M
Sbjct: 71  VLYRFRNAGLLAYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMMKKKM 130

Query: 345 LNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEI 166
           LNVETFCI++RKYAR QKV+EA+Y FNVMEKYD+PPNL AFNGLLSALCKSKNVRKAQEI
Sbjct: 131 LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEI 190

Query: 165 FDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFDNMKDR-FIPDSKTYSILLE 4
           F+NM+DRF PDSKTYSILLEGWGK PNLPKARE+F  M D   +PD  TYSI+++
Sbjct: 191 FENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVD 245



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
 Frame = -1

Query: 582 LDTVLNQSGIRVSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIE--SL 409
           L  +     +R + +I E++  RF           E  GK+ N   +   +  M++  SL
Sbjct: 175 LSALCKSKNVRKAQEIFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSL 234

Query: 408 AKIRQYQIMWDLV-NSMRSNGMLNVET-------------FCIIIRKYARTQKVEEAVYT 271
             I  Y IM D++  + R +  L +               + +++  Y    ++EEAV T
Sbjct: 235 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDT 294

Query: 270 FNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGK 94
           F  ME+  +  ++A FN L+ A CK+  ++    +   MK + + P+SK+ +I+L     
Sbjct: 295 FLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLID 354

Query: 93  APNLPKAREIFDNMKDRFIPDSKTYSILLE 4
                +A ++F  M     PD+ TY+++++
Sbjct: 355 RGEKDEAFDVFRKMIKVCEPDADTYTMMIK 384


>ref|XP_006581591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X2 [Glycine max]
           gi|571460055|ref|XP_006581592.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X3 [Glycine max]
           gi|571460057|ref|XP_006581593.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X4 [Glycine max]
           gi|571460059|ref|XP_006581594.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X5 [Glycine max]
           gi|571460061|ref|XP_006581595.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X6 [Glycine max]
          Length = 481

 Score =  338 bits (867), Expect = 2e-90
 Identities = 166/244 (68%), Positives = 204/244 (83%), Gaps = 2/244 (0%)
 Frame = -1

Query: 729 MIVLHCYSNKLCLQRLVLTRLYSSSET-IKDTSDSTKGICKVMMSCPKSGLDTVLNQSGI 553
           MI L  + +K+  + +V T+++S+SE  I+D  ++++ +CKVMM+CP  GLDT LNQ+G+
Sbjct: 1   MIKLCSHRSKIFSKWVVFTKMHSASEAMIQDVGEASERVCKVMMTCPTLGLDTALNQTGV 60

Query: 552 RVSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDL 373
           RVSPD+VE+VLKRFENAGM A++FFEWA KQR Y HSIRAYH MIESLAKIRQYQI+WDL
Sbjct: 61  RVSPDLVENVLKRFENAGMPAFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDL 120

Query: 372 VNSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKS 193
           V++MR  GMLNVETFCI++RKYAR  KV+EAVYTFNVM+KYDV PNLAAFNGLLSALCKS
Sbjct: 121 VSAMRKKGMLNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKS 180

Query: 192 KNVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFDNMKDRFI-PDSKTYS 16
            NVRKAQEIFD MK +F+PD K+YSILLEGWGKAPNLP+ARE+F  M +    PD  TY 
Sbjct: 181 NNVRKAQEIFDAMKGQFVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYG 240

Query: 15  ILLE 4
           I+++
Sbjct: 241 IMVD 244


>ref|XP_004251179.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Solanum lycopersicum]
          Length = 478

 Score =  336 bits (861), Expect = 8e-90
 Identities = 163/241 (67%), Positives = 195/241 (80%), Gaps = 1/241 (0%)
 Frame = -1

Query: 723 VLHCYSNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVS 544
           +L  +  K+C + +  TR+YSS ET +   D    +CK+MMSCPK GLD  L+QSGIRV 
Sbjct: 1   MLRRFHQKVCGRTMNFTRMYSSKETTEVKLDPLTRLCKIMMSCPKVGLDIELDQSGIRVL 60

Query: 543 PDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNS 364
           P++VEDVLKRFENAGMLAY+FFEWAGKQ NY HS RAYH+MI SLAKIRQYQ+MWDLVN 
Sbjct: 61  PEMVEDVLKRFENAGMLAYRFFEWAGKQHNYEHSTRAYHSMIGSLAKIRQYQMMWDLVNE 120

Query: 363 MRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNV 184
           M++  MLN+ETFCII+RKYAR QKVEE +YTF++M K+DVPPNLAAFNGLLSALCKSKNV
Sbjct: 121 MKTKRMLNIETFCIIMRKYARAQKVEETLYTFHIMNKFDVPPNLAAFNGLLSALCKSKNV 180

Query: 183 RKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFDNMKD-RFIPDSKTYSILL 7
            KAQEIFD  K+ F PDSKTYSIL+EGWG+APNLPKARE++  M +    PD  TY I++
Sbjct: 181 EKAQEIFDTKKNEFTPDSKTYSILIEGWGRAPNLPKAREVYREMIEVGCNPDIVTYGIMV 240

Query: 6   E 4
           +
Sbjct: 241 D 241



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
 Frame = -1

Query: 441 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVE-TFCIIIRKYARTQKVEEAVYTFN 265
           I  Y  M++ L K  +     ++V  M  +G       + +++  Y    ++E+A+ TF 
Sbjct: 233 IVTYGIMVDILCKAGRVDEAVEIVKEMDFSGCRPTSFIYSVLVHTYGLENRIEDAIDTFL 292

Query: 264 VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAP 88
            MEK  V  ++A +N L+SA CK    +    + ++M+ + + P+++T +I+L G     
Sbjct: 293 EMEKNGVEADVAVYNSLISAFCKVNKFQNVYMVLNDMQIKGVSPNARTCNIILSGLIARG 352

Query: 87  NLPKAREIFDNMKDRFIPDSKTYSILLE 4
               A +IF  M     PD+ TY+++++
Sbjct: 353 ETDDAFKIFRRMLKICDPDADTYTMMIK 380


>gb|EYU18727.1| hypothetical protein MIMGU_mgv1a027101mg [Mimulus guttatus]
          Length = 497

 Score =  335 bits (860), Expect = 1e-89
 Identities = 163/221 (73%), Positives = 190/221 (85%), Gaps = 1/221 (0%)
 Frame = -1

Query: 663 SSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVEDVLKRFENAGMLAYQ 484
           SS E ++D+++  K +CK+M SCPK GLDT L+QSGIRVS ++VE VL++FENAGMLA++
Sbjct: 40  SSGELVQDSTEIAKRVCKIMTSCPKLGLDTALDQSGIRVSEEVVEKVLEKFENAGMLAHR 99

Query: 483 FFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCIIIRKYA 304
           FFEWA KQR Y HS+RAYH MIESLAKIRQY IMWDLVNSMRS GMLN+ETFC+I+RKYA
Sbjct: 100 FFEWAHKQRRYSHSVRAYHIMIESLAKIRQYDIMWDLVNSMRSKGMLNIETFCVIMRKYA 159

Query: 303 RTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFIPDSKT 124
           R QKV+EAVYTFNVM KYDV PNLAAFNGLLSAL KSKN+RKAQEIFD MK++F PDSKT
Sbjct: 160 RAQKVDEAVYTFNVMNKYDVQPNLAAFNGLLSALSKSKNIRKAQEIFDAMKNQFSPDSKT 219

Query: 123 YSILLEGWGKAPNLPKAREIFDNMKDRFI-PDSKTYSILLE 4
           YSILLEGWG+APNLPKAREIF +M D    PD  TY I+++
Sbjct: 220 YSILLEGWGRAPNLPKAREIFTDMVDSGCNPDIVTYGIMVD 260



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
 Frame = -1

Query: 441 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVE-TFCIIIRKYARTQKVEEAVYTFN 265
           I  Y  M++ L K  +     +++  M  +G       + ++I  Y    ++E+A+ TF 
Sbjct: 252 IVTYGIMVDILCKAGRTSEAVEVIKEMEFSGCQPTSFIYSVLIHTYGIENRIEDAIDTFL 311

Query: 264 VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAP 88
            ME+  V  ++A +N L+SA CK    + A ++ D M+ + + P+S+T +IL+ G     
Sbjct: 312 QMERNGVIADVAVYNALISAFCKVNKFKNAYKVVDEMEKKGVSPNSRTCNILINGLIGRE 371

Query: 87  NLPKAREIFDNMKDRFIPDSKTYSILLE 4
              +A ++F  +     PD+ TY+++++
Sbjct: 372 ETDEAFKVFRRLSKICEPDADTYTMMIK 399


>gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
          Length = 481

 Score =  334 bits (857), Expect = 2e-89
 Identities = 158/235 (67%), Positives = 194/235 (82%), Gaps = 1/235 (0%)
 Frame = -1

Query: 705 NKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVED 526
           ++ C +  +  RLYSSSE ++D +D  K I KV+MS P+  LD+ L+QSG+RVS ++VED
Sbjct: 10  SRFCCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVED 69

Query: 525 VLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGM 346
           VL RF NAG+L Y+FF+W+ KQR+Y HS+RAYH MIES AKIRQY++MWDL+N+MR   M
Sbjct: 70  VLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM 129

Query: 345 LNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEI 166
           LNVETFCI++RKYAR QKV+EA+Y FNVMEKYD+PPNL AFNGLLSALCKSKNVRKAQE+
Sbjct: 130 LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEV 189

Query: 165 FDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFDNMKDRFI-PDSKTYSILLE 4
           F+NM+DRF PDSKTYSILLEGWGK PNLPKARE+F  M D    PD  TYSI+++
Sbjct: 190 FENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVD 244



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 48/210 (22%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
 Frame = -1

Query: 582 LDTVLNQSGIRVSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAK 403
           L  +     +R + ++ E++  RF           E  GK+ N   +   +  MI++   
Sbjct: 174 LSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCH 233

Query: 402 --IRQYQIMWDLV-NSMRSNGMLNVET-------------FCIIIRKYARTQKVEEAVYT 271
             I  Y IM D++  + R +  L +               + +++  Y    ++EEAV T
Sbjct: 234 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 293

Query: 270 FNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGK 94
           F  ME+  +  ++A FN L+ A CK+  ++    +   MK + + P+SK+ +I+L    +
Sbjct: 294 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 353

Query: 93  APNLPKAREIFDNMKDRFIPDSKTYSILLE 4
                +A ++F  M     PD+ TY+++++
Sbjct: 354 RGEKDEAFDVFRKMIKVCEPDADTYTMVIK 383


>ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77360, mitochondrial; Flags: Precursor
           gi|332197848|gb|AEE35969.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  334 bits (857), Expect = 2e-89
 Identities = 158/235 (67%), Positives = 194/235 (82%), Gaps = 1/235 (0%)
 Frame = -1

Query: 705 NKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVED 526
           ++ C +  +  RLYSSSE ++D +D  K I KV+MS P+  LD+ L+QSG+RVS ++VED
Sbjct: 46  SRFCCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVED 105

Query: 525 VLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGM 346
           VL RF NAG+L Y+FF+W+ KQR+Y HS+RAYH MIES AKIRQY++MWDL+N+MR   M
Sbjct: 106 VLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM 165

Query: 345 LNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEI 166
           LNVETFCI++RKYAR QKV+EA+Y FNVMEKYD+PPNL AFNGLLSALCKSKNVRKAQE+
Sbjct: 166 LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEV 225

Query: 165 FDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFDNMKDRFI-PDSKTYSILLE 4
           F+NM+DRF PDSKTYSILLEGWGK PNLPKARE+F  M D    PD  TYSI+++
Sbjct: 226 FENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVD 280



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 48/210 (22%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
 Frame = -1

Query: 582 LDTVLNQSGIRVSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAK 403
           L  +     +R + ++ E++  RF           E  GK+ N   +   +  MI++   
Sbjct: 210 LSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCH 269

Query: 402 --IRQYQIMWDLV-NSMRSNGMLNVET-------------FCIIIRKYARTQKVEEAVYT 271
             I  Y IM D++  + R +  L +               + +++  Y    ++EEAV T
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 329

Query: 270 FNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGK 94
           F  ME+  +  ++A FN L+ A CK+  ++    +   MK + + P+SK+ +I+L    +
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 389

Query: 93  APNLPKAREIFDNMKDRFIPDSKTYSILLE 4
                +A ++F  M     PD+ TY+++++
Sbjct: 390 RGEKDEAFDVFRKMIKVCEPDADTYTMVIK 419


>ref|XP_006434266.1| hypothetical protein CICLE_v10000990mg [Citrus clementina]
           gi|567883417|ref|XP_006434267.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|567883419|ref|XP_006434268.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|567883421|ref|XP_006434269.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|567883423|ref|XP_006434270.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|557536388|gb|ESR47506.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|557536389|gb|ESR47507.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|557536390|gb|ESR47508.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|557536391|gb|ESR47509.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|557536392|gb|ESR47510.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
          Length = 480

 Score =  332 bits (851), Expect = 1e-88
 Identities = 170/243 (69%), Positives = 197/243 (81%), Gaps = 1/243 (0%)
 Frame = -1

Query: 729 MIVLHCYSNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIR 550
           MI ++   NK+    +   R Y+SSE   +  D+ K I K+M+S PK  LDT L+QSGIR
Sbjct: 1   MIKVYHSRNKMISGCISFLRRYNSSEPSTEALDAAKSISKIMLSSPKVVLDTALDQSGIR 60

Query: 549 VSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLV 370
           VSP+IVEDVL++F+NAG LA+ FF+WA KQ+NY HS+RAYH+MIESLAKIRQYQIMWDLV
Sbjct: 61  VSPEIVEDVLEKFKNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLV 120

Query: 369 NSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSK 190
           N+MR+  MLNVETFCII+RKYAR QKVEEAVYTFNVM+KY V  NLAAFNGLLSALCKSK
Sbjct: 121 NAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSK 180

Query: 189 NVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFDNMKDRFI-PDSKTYSI 13
           NVRKAQEIFD MKDRFIPDSKTYSILLEGWGK PNLP+AREIF  M D    PD  TY I
Sbjct: 181 NVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGI 240

Query: 12  LLE 4
           +++
Sbjct: 241 MVD 243



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
 Frame = -1

Query: 441 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVE-TFCIIIRKYARTQKVEEAVYTFN 265
           I  Y  M++ L K  +      +V SM S         + +++  Y    ++E+AV TF 
Sbjct: 235 IVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCQPTSFIYSVLVHTYGVENRIEDAVDTFL 294

Query: 264 VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAP 88
            MEK  +  ++A +N L+ A CK+   +    +  +M  + + P+S+T +I+L G     
Sbjct: 295 EMEKNGIQADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRG 354

Query: 87  NLPKAREIFDNMKDRFIPDSKTYSILLE 4
              +A  +F  M      D+ TY+++++
Sbjct: 355 ETDEAYRVFRRMIKLCEADADTYTMMIK 382


>ref|XP_006472835.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568837650|ref|XP_006472836.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X2 [Citrus sinensis]
           gi|568837652|ref|XP_006472837.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X3 [Citrus sinensis]
           gi|568837654|ref|XP_006472838.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X4 [Citrus sinensis]
          Length = 480

 Score =  330 bits (847), Expect = 4e-88
 Identities = 169/243 (69%), Positives = 196/243 (80%), Gaps = 1/243 (0%)
 Frame = -1

Query: 729 MIVLHCYSNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIR 550
           MI ++   NK+    +   R Y+SSE   +  D+ K I K+M+S PK  LDT L+QSGIR
Sbjct: 1   MIKVYHSRNKMISGCISFLRRYNSSEPSTEALDAAKSISKIMLSSPKVVLDTALDQSGIR 60

Query: 549 VSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLV 370
           VSP+IVEDVL++F+NAG LA+ FF+W  KQ+NY HS+RAYH+MIESLAKIRQYQIMWDLV
Sbjct: 61  VSPEIVEDVLEKFKNAGTLAFCFFKWTEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLV 120

Query: 369 NSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSK 190
           N+MR+  MLNVETFCII+RKYAR QKVEEAVYTFNVM+KY V  NLAAFNGLLSALCKSK
Sbjct: 121 NAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSK 180

Query: 189 NVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFDNMKDRFI-PDSKTYSI 13
           NVRKAQEIFD MKDRFIPDSKTYSILLEGWGK PNLP+AREIF  M D    PD  TY I
Sbjct: 181 NVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGI 240

Query: 12  LLE 4
           +++
Sbjct: 241 MVD 243



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
 Frame = -1

Query: 441 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVE-TFCIIIRKYARTQKVEEAVYTFN 265
           I  Y  M++ L K  +      +V SM S         + +++  Y    ++E+AV TF 
Sbjct: 235 IVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFL 294

Query: 264 VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAP 88
            MEK  +  ++A +N L+ A CK+   +    +  +M  + + P+S+T +I+L G     
Sbjct: 295 EMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRG 354

Query: 87  NLPKAREIFDNMKDRFIPDSKTYSILLE 4
              +A  +F  M      D+ TY+++++
Sbjct: 355 ETDEAYRVFRRMIKLCEADADTYTMMIK 382


>ref|XP_002307458.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550339385|gb|EEE94454.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 478

 Score =  329 bits (844), Expect = 8e-88
 Identities = 164/227 (72%), Positives = 193/227 (85%), Gaps = 1/227 (0%)
 Frame = -1

Query: 681 VLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVEDVLKRFENA 502
           +L R Y SSET    SD+TK ICK+MMS     LDT L+QSG+RVS  IV+DVLK+FENA
Sbjct: 18  MLKRRYMSSET----SDTTKTICKIMMSSSVVTLDTALDQSGVRVSEQIVDDVLKKFENA 73

Query: 501 GMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCI 322
           GM+AY+FFEWA KQR+Y HS++A+HT+I+SLAKIRQYQ+MWD+V  M+S  M+NVETFCI
Sbjct: 74  GMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAKIRQYQLMWDVVKVMKSKRMVNVETFCI 133

Query: 321 IIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRF 142
           I+RKYAR QKVEEAVYTFN+M+KYDVPPNLAAFNGLLSALCKSKNVRKAQEIFD++KDRF
Sbjct: 134 IMRKYARAQKVEEAVYTFNIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRF 193

Query: 141 IPDSKTYSILLEGWGKAPNLPKAREIFDNM-KDRFIPDSKTYSILLE 4
           +PDSKTYSILLEGWGK PNLPKAREIF  M  +   PD  TY I+++
Sbjct: 194 VPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVD 240


>ref|XP_003526650.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 454

 Score =  327 bits (839), Expect = 3e-87
 Identities = 157/216 (72%), Positives = 186/216 (86%), Gaps = 1/216 (0%)
 Frame = -1

Query: 648 IKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVEDVLKRFENAGMLAYQFFEWA 469
           I+D  ++++ +CKVMM+CP  GLDT LNQ+G+RVSPD+VE+VLKRFENAGM A++FFEWA
Sbjct: 2   IQDVGEASERVCKVMMTCPTLGLDTALNQTGVRVSPDLVENVLKRFENAGMPAFRFFEWA 61

Query: 468 GKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCIIIRKYARTQKV 289
            KQR Y HSIRAYH MIESLAKIRQYQI+WDLV++MR  GMLNVETFCI++RKYAR  KV
Sbjct: 62  EKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKGMLNVETFCIMMRKYARANKV 121

Query: 288 EEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFIPDSKTYSILL 109
           +EAVYTFNVM+KYDV PNLAAFNGLLSALCKS NVRKAQEIFD MK +F+PD K+YSILL
Sbjct: 122 DEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQFVPDEKSYSILL 181

Query: 108 EGWGKAPNLPKAREIFDNMKDRFI-PDSKTYSILLE 4
           EGWGKAPNLP+ARE+F  M +    PD  TY I+++
Sbjct: 182 EGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVD 217


>ref|XP_004502524.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X1 [Cicer arietinum]
           gi|502135996|ref|XP_004502525.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X2 [Cicer arietinum]
           gi|502135999|ref|XP_004502526.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X3 [Cicer arietinum]
          Length = 480

 Score =  327 bits (839), Expect = 3e-87
 Identities = 166/243 (68%), Positives = 193/243 (79%), Gaps = 1/243 (0%)
 Frame = -1

Query: 729 MIVLHCYSNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIR 550
           MI +  +   L L+ +   +  S+SE I D +D T+ + KVMMS P   LDT LNQ+G+R
Sbjct: 1   MIKISDHRKNLLLKCVSFAKTLSTSEPIHDIADVTETLYKVMMSNPAVTLDTALNQTGVR 60

Query: 549 VSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLV 370
           VSP++VE VLKRFENAGM A++FFEWA KQRNY HS++AYH MIESLAKIRQYQIMWDLV
Sbjct: 61  VSPELVEIVLKRFENAGMSAFRFFEWAEKQRNYSHSVKAYHLMIESLAKIRQYQIMWDLV 120

Query: 369 NSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSK 190
           NSMR  GM+NVETFCII+RKYAR  KV+EAVYTFNVM+KYD P NLAAFNGLLSALCKS+
Sbjct: 121 NSMRKKGMVNVETFCIIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAFNGLLSALCKSR 180

Query: 189 NVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFDNMKDRFI-PDSKTYSI 13
           NVRKAQEIFD+MK RF PDSKTYSILL GWGK PNLPKARE+F  M      PD  TY I
Sbjct: 181 NVRKAQEIFDSMKGRFEPDSKTYSILLAGWGKEPNLPKAREVFGEMVCAGCNPDIVTYGI 240

Query: 12  LLE 4
           +++
Sbjct: 241 MVD 243



 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
 Frame = -1

Query: 441 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVE-TFCIIIRKYARTQKVEEAVYTFN 265
           I  Y  M++ L K  +     +++  M +N        + +++  Y    ++E+A+ TF 
Sbjct: 235 IVTYGIMVDILCKAGRVDEAVEVLKDMDANNCRPTTFIYSVLVHTYGVENRIEDAIDTFM 294

Query: 264 VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAP 88
            ME+  V  ++  +N L+SA CK+  ++    +   M+ + I P+S+T ++++       
Sbjct: 295 EMERNGVEADVVVYNALISAFCKANKIKNVHRVLKEMEKKGIAPNSRTCNVIMTSLITQG 354

Query: 87  NLPKAREIFDNMKDRFIPDSKTYSILLE 4
              KA  +F  M     PD+ TY++L++
Sbjct: 355 ETDKAFIVFRRMIKLCEPDADTYTMLIK 382


>ref|XP_006301167.1| hypothetical protein CARUB_v10021564mg, partial [Capsella rubella]
           gi|482569877|gb|EOA34065.1| hypothetical protein
           CARUB_v10021564mg, partial [Capsella rubella]
          Length = 486

 Score =  326 bits (835), Expect = 9e-87
 Identities = 159/237 (67%), Positives = 194/237 (81%), Gaps = 3/237 (1%)
 Frame = -1

Query: 705 NKLCLQRLVLTRLYSSS--ETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIV 532
           ++L  + ++  +LYSSS  E  +D +D  K I KVMMS P+  LD+ L+QSG+RVS ++V
Sbjct: 13  SRLGCKSILSAKLYSSSSSEPARDVADVAKNISKVMMSSPQLVLDSALDQSGLRVSQEVV 72

Query: 531 EDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSN 352
           EDVL RF NAG+LAY+FF+W+ KQR+Y HS+RAYH MIES AKIRQY++MWDL+NSMR  
Sbjct: 73  EDVLNRFRNAGLLAYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINSMRKK 132

Query: 351 GMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQ 172
            MLN+ETFCI++RKYAR QKV+EA+Y FNVMEKYD+PPNL AFNGLLSALCKSKNVRKAQ
Sbjct: 133 KMLNIETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQ 192

Query: 171 EIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFDNMKDRFI-PDSKTYSILLE 4
           EIF+NM+DRF P SKTYSILLEGWGK PNLPKARE+F  M D    PD  TYSI+++
Sbjct: 193 EIFENMRDRFTPSSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVD 249



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
 Frame = -1

Query: 582 LDTVLNQSGIRVSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAK 403
           L  +     +R + +I E++  RF  +        E  GK+ N   +   +  MI++   
Sbjct: 179 LSALCKSKNVRKAQEIFENMRDRFTPSSKTYSILLEGWGKEPNLPKAREVFREMIDAGCH 238

Query: 402 --IRQYQIMWDLV-NSMRSNGMLNVET-------------FCIIIRKYARTQKVEEAVYT 271
             I  Y IM D++  + R +  L +               + +++  Y    ++EEAV T
Sbjct: 239 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 298

Query: 270 FNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGK 94
           F  ME+  +  ++A FN L+ A CK+  ++    +   MK++ + P+SK+ +I+L     
Sbjct: 299 FLEMERSGMKADVAIFNSLIGAFCKANRMKNVYRVLKEMKNKGVTPNSKSCNIILRHLID 358

Query: 93  APNLPKAREIFDNMKDRFIPDSKTYSILLE 4
                +A ++F  M     PD+ TY+++++
Sbjct: 359 RGETDEAFDVFRKMIKVCEPDADTYTMMIK 388


>ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
           gi|449499065|ref|XP_004160711.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
          Length = 439

 Score =  322 bits (824), Expect = 2e-85
 Identities = 154/202 (76%), Positives = 181/202 (89%), Gaps = 1/202 (0%)
 Frame = -1

Query: 606 MMSCPKSGLDTVLNQSGIRVSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYH 427
           MM+C    L+T L+Q+GIR+SP+I E VL+RFENAGMLAY+FFEWA KQRNYVHS+RAYH
Sbjct: 1   MMTCHTLALETALDQTGIRISPEIAEPVLRRFENAGMLAYRFFEWASKQRNYVHSVRAYH 60

Query: 426 TMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYD 247
           +MIESLAKIRQYQ++WDLVN+MR+  +LNVE FCII+RKYAR QKVEEAVYTFNVMEKY+
Sbjct: 61  SMIESLAKIRQYQMVWDLVNAMRNKEILNVEAFCIIMRKYARAQKVEEAVYTFNVMEKYN 120

Query: 246 VPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKARE 67
           + PN+AAFNGLLSALCKSKNVRKAQEIFDNMKD+F+PDSKTYSIL+EGWG+APNLPKARE
Sbjct: 121 MKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNLPKARE 180

Query: 66  IFDNMKDR-FIPDSKTYSILLE 4
           I+  M D   IPD  TYSI+++
Sbjct: 181 IYREMIDSGCIPDEVTYSIMVD 202



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
 Frame = -1

Query: 432 YHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVE-TFCIIIRKYARTQKVEEAVYTFNVME 256
           Y  M++ L K  +     ++V  M  N        + +++  Y    ++E+AV TF  ME
Sbjct: 197 YSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEME 256

Query: 255 KYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAPNLP 79
           +  V  ++AA+N L+SA CK+  ++    +  +M  + + P+S+T +I++          
Sbjct: 257 RNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETD 316

Query: 78  KAREIFDNMKDRFIPDSKTYSILLE 4
           +A +IF  M     PD  +Y+++++
Sbjct: 317 EAFKIFRRMIKVCEPDVDSYTMIIK 341


>ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540536|gb|EEF42103.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 439

 Score =  320 bits (820), Expect = 5e-85
 Identities = 157/202 (77%), Positives = 176/202 (87%), Gaps = 1/202 (0%)
 Frame = -1

Query: 606 MMSCPKSGLDTVLNQSGIRVSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYH 427
           MMS P   L T L+Q+GIRVSP+IVEDVL+RFENAGM+AY+FFEWA KQ +Y HS+RAYH
Sbjct: 1   MMSSPAVTLHTALDQNGIRVSPEIVEDVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYH 60

Query: 426 TMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYD 247
           TMIESLAKIRQYQIMWDL+N+M+   MLNVETFCII+RKYAR QK+EEAVYTFNVMEKYD
Sbjct: 61  TMIESLAKIRQYQIMWDLINAMKRKRMLNVETFCIIMRKYARAQKLEEAVYTFNVMEKYD 120

Query: 246 VPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKARE 67
           VPPNLAAFNGL SALCKSKNVRKAQEIFD+ KDRF+PDSKTY+ILLEGWGK PNLPKARE
Sbjct: 121 VPPNLAAFNGLFSALCKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPNLPKARE 180

Query: 66  IFDNMKD-RFIPDSKTYSILLE 4
           IF  M D    PD  TY I+++
Sbjct: 181 IFREMVDVGCSPDIVTYGIMVD 202



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
 Frame = -1

Query: 441 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVE-TFCIIIRKYARTQKVEEAVYTFN 265
           I  Y  M++ L K  +     D+V  M           + ++I  Y    ++E+AV TF 
Sbjct: 194 IVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTFL 253

Query: 264 VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAP 88
            MEK  V  ++AA+N L+ A CK    +    + + M  + + P+S+T +I+L       
Sbjct: 254 GMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARG 313

Query: 87  NLPKAREIFDNMKDRFIPDSKTYSILLE 4
              +A  +F  M     PD+ TY+++++
Sbjct: 314 ETDEAFRVFRRMIKVCEPDADTYTMMIK 341