BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00020357
         (574 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   115   6e-24
ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [The...    79   7e-13
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...    79   7e-13
emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea]       79   1e-12
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    71   2e-10
ref|XP_002533596.1| conserved hypothetical protein [Ricinus comm...    67   4e-09
ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Popu...    65   1e-08
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    64   3e-08
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...    64   3e-08
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...    63   6e-08
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...    63   6e-08
gb|ABD96891.1| hypothetical protein [Cleome spinosa]                   61   2e-07
ref|XP_006387518.1| hypothetical protein POPTR_0907s00020g [Popu...    59   1e-06
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    58   2e-06
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr...    58   2e-06
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...    58   2e-06
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr...    58   2e-06
ref|XP_006373532.1| hypothetical protein POPTR_0017s14590g [Popu...    57   3e-06

>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|298204431|emb|CBI16911.3| unnamed protein product
           [Vitis vinifera]
          Length = 1035

 Score =  115 bits (289), Expect = 6e-24
 Identities = 66/123 (53%), Positives = 78/123 (63%), Gaps = 6/123 (4%)
 Frame = -2

Query: 354 IDRFAPFDKHTNFH---LNKSAVMWRSIAKYASPKKLRFSI--NSHSSLRVYSYLGLSHA 190
           +D    F+K TNF    L K  VMWR+IAK A P+  R  +  +S    R YS+LG S  
Sbjct: 17  LDLIISFEKPTNFRPNPLKKPTVMWRNIAKRAIPRAPRKCVYLDSQPLSRRYSFLGFSQD 76

Query: 189 STFPEKIKFRHSELGSCSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFNA-CPK 13
             FPE +KF   E  SCSSSGF  MGF RIGE S RE+++GRPSFGC RNQ GF+  CPK
Sbjct: 77  LIFPEIMKFGTFEPSSCSSSGFSEMGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFCPK 136

Query: 12  SYA 4
           SYA
Sbjct: 137 SYA 139


>ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
           gi|508711950|gb|EOY03847.1| DNA/RNA polymerases
           superfamily protein [Theobroma cacao]
          Length = 1100

 Score = 79.3 bits (194), Expect = 7e-13
 Identities = 52/124 (41%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
 Frame = -2

Query: 357 RIDRFAPFDKHTNFHLNK-----SAVMWRSIAKYASPKKLRFSINSHSSLRVYSYLGLSH 193
           + D F P D      L +     S VMWR+IAK+A  ++     +     R YS+LG S 
Sbjct: 16  KFDHFVPLDNRNPSILYQNPPKISIVMWRNIAKHAISRRTH---SFQCFARTYSFLGTSQ 72

Query: 192 ASTFPEKIKFRHSELGS-CSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFNA-C 19
            S F EK KFR  + GS CS+S FL MG  RIGE     E IG+ SFG  RN+ G +  C
Sbjct: 73  DSIFHEKSKFRGLKFGSFCSNSRFLDMGGRRIGEVLTNVEYIGKQSFGSPRNEIGCSGLC 132

Query: 18  PKSY 7
           P+ Y
Sbjct: 133 PRGY 136


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
           gi|462411068|gb|EMJ16117.1| hypothetical protein
           PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score = 79.3 bits (194), Expect = 7e-13
 Identities = 49/109 (44%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
 Frame = -2

Query: 318 FHLNKSAV---MWRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSEL 148
           FH N S +   +WR+ AK A  +K RF INS S  R YS LG+   S FP    F+  EL
Sbjct: 25  FHKNPSMISTTVWRNFAKQAISRKQRFHINSQSFSRAYSLLGICQESVFPG--NFKPFEL 82

Query: 147 GSCSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFNA-CPKSYA 4
            SCSS  F  +GF   G  S  E+ + +PSF   RN   FN  CPK YA
Sbjct: 83  SSCSSLRFSEVGFRGKGAISSPEDCMCKPSFWSVRNPIWFNGFCPKGYA 131


>emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 1036

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
 Frame = -2

Query: 336 FDKHTNFHLNK---SAVMWRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTFPEKIK 166
           +   +NF +N    S +MWR+ AK A  +     +   S  R YS+LG +H   F +++K
Sbjct: 24  YKSRSNFLINPCFDSTIMWRNFAKQAISRTPNLCLRKFSISRSYSFLGGTHDCGFSDRLK 83

Query: 165 FRHSELGSCSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFN-ACPKSYA 4
           FR  ELG C +  F  +GFCR G    +E    RP  GC  N+  FN  CPK YA
Sbjct: 84  FRPFELGFCKNRSFSEVGFCREGGSLVKEGIGERPVSGCLGNRLNFNVVCPKGYA 138


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 1022

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 7/118 (5%)
 Frame = -2

Query: 336 FDKHTNFHLNK---SAVMWRSIAKYAS---PKKLRFSINSHSSLRVYSYLGLSHASTFPE 175
           FD+ T+   N    S +MWR+I K  S   P+K+  +  +H+    YSYLG    S F +
Sbjct: 14  FDQFTDLETNPYHISPIMWRNIVKQFSTRTPQKILLTSKNHA----YSYLGFGLHSVFKD 69

Query: 174 KIKFRHSELGSCSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFN-ACPKSYA 4
           K   R     SCS+SGFL MGF  +GEF P +E + RP     ++Q   N  C K+YA
Sbjct: 70  KRTLRSFIPVSCSNSGFLEMGFQNLGEFLPGDEFLRRPLLCAMKSQVSNNDICRKNYA 127


>ref|XP_002533596.1| conserved hypothetical protein [Ricinus communis]
           gi|223526525|gb|EEF28787.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 36/91 (39%), Positives = 52/91 (57%)
 Frame = -2

Query: 294 MWRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFLGM 115
           MWR++AK    +    S++SH     YS+LGLS   +F +K K   S L +CSS     +
Sbjct: 1   MWRNVAKQTISRAQSKSLSSHPLSSTYSFLGLSQEPSFTDKCKL--SPLYACSSL----V 54

Query: 114 GFCRIGEFSPREESIGRPSFGCARNQTGFNA 22
           GFCR+GE  P E+ +G+P FG   N+   N+
Sbjct: 55  GFCRLGEIVPYEDFMGKPGFGLVGNKDNSNS 85


>ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Populus trichocarpa]
           gi|550340797|gb|ERP62048.1| hypothetical protein
           POPTR_0004s11060g [Populus trichocarpa]
          Length = 475

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 48/128 (37%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
 Frame = -2

Query: 360 KRIDRFAPFDKHTNF----HLNKSAVMWRSIAKYASPKKLRFSINSHSSLRVYSYLGLSH 193
           K+ID    FDK  +     +   S VMWR++AK A  K    S+N  S  R +S+LG   
Sbjct: 12  KKIDPLIAFDKKPSILSLINSKPSTVMWRNVAKQAILKPQSKSLNFPSFPRTHSFLGAPQ 71

Query: 192 ASTFPEKIKFRHSELGSCSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFNA--- 22
              F EK KF HS   S        + F RIGE S  E+ +G+PSFG  RN    N    
Sbjct: 72  EPIFFEKSKF-HSVNNSSPQ-----LCFRRIGEISTHEDYMGKPSFGFLRNGDSSNGNLC 125

Query: 21  ---CPKSY 7
              CP+ Y
Sbjct: 126 SGLCPRGY 133


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 46/118 (38%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
 Frame = -2

Query: 336 FDKHTNFHLN---KSAVMWRSIAKYAS---PKKLRFSINSHSSLRVYSYLGLSHASTFPE 175
           F++ TN   N    S +MWR+I K  S   P+K+  +    S  R YS+LG    S F +
Sbjct: 14  FNQFTNLETNPYQNSPIMWRNIVKQFSSRTPQKILLT----SKNRTYSFLGFGQDSVFKD 69

Query: 174 KIKFRHSELGSCSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFN-ACPKSYA 4
           K   R     SCS+SGFL MGF  +GEF   +E + RP     ++Q   N  C KSYA
Sbjct: 70  KRILRSFIPVSCSNSGFLEMGFQNLGEF---DEFLRRPLLCAMKSQVSNNDICRKSYA 124


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial; AltName:
           Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 2B; Flags: Precursor
           gi|21425665|emb|CAC95020.1| mitochondrial and
           chloroplast RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 46/116 (39%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
 Frame = -2

Query: 333 DKHTNFHLNK---SAVMWRSIAKYAS---PKKLRFSINSHSSLRVYSYLGLSHASTFPEK 172
           DK T   +N+   S +MWR+I K  S   P+KL FS    S  R YS+LG    S F + 
Sbjct: 19  DKPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFS----SKNRTYSFLGFGQDSVFKDN 74

Query: 171 IKFRHSELGSCSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFNACPKSYA 4
            KFR     SCS+   + MGF  +GE+ P +E + RP      N   F  C KSYA
Sbjct: 75  TKFRSLIPISCSN---IVMGFQNLGEYLPGDEFLSRPLLKNQVNSNDF-CCRKSYA 126


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris] gi|17221595|dbj|BAB78465.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 47/117 (40%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
 Frame = -2

Query: 333 DKHTNFHLN---KSAVMWRSIAKYAS---PKKLRFSINSHSSLRVYSYLGLSHASTFPEK 172
           DK T   +N    S +MWR+I K  S   P+KL FS    S  R YS+LG    S F + 
Sbjct: 19  DKPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFS----SKNRTYSFLGFGQDSIFKDN 74

Query: 171 IKFRHSELGSCSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFN-ACPKSYA 4
            KFR     SCS+   + MGF  +GE+ P +E + RP     +NQ   N  C KSYA
Sbjct: 75  TKFRSLIPISCSN---IVMGFQNLGEYLPGDEFLSRP---LIKNQVNNNFCCRKSYA 125


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
           AltName: Full=T7 bacteriophage-type single subunit RNA
           polymerase 2; Flags: Precursor
           gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 47/117 (40%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
 Frame = -2

Query: 333 DKHTNFHLN---KSAVMWRSIAKYAS---PKKLRFSINSHSSLRVYSYLGLSHASTFPEK 172
           DK T   +N    S +MWR+I K  S   P+KL FS    S  R YS+LG    S F + 
Sbjct: 19  DKPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFS----SKNRTYSFLGFGQDSIFKDN 74

Query: 171 IKFRHSELGSCSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFN-ACPKSYA 4
            KFR     SCS+   + MGF  +GE+ P +E + RP     +NQ   N  C KSYA
Sbjct: 75  TKFRSLIPISCSN---IVMGFQNLGEYLPGDEFLSRP---LIKNQVNNNFCCRKSYA 125


>gb|ABD96891.1| hypothetical protein [Cleome spinosa]
          Length = 1021

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 45/120 (37%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
 Frame = -2

Query: 351 DRFAPFDKHTNFHLN---KSAVMWRSIAKYA-SPKKLRFSINSHSSLRVYSYLGLSHAST 184
           D   P DK      N   +S+ MWR+IAK   S   +R S+   S       LG S  S 
Sbjct: 18  DHLVPLDKPLISSRNPVVQSSAMWRNIAKQTISRSPVRLSVCRQSR----GLLGFSSESI 73

Query: 183 FPEKIKFRHSELGSCSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFNA-CPKSY 7
           FPE   FR S +G  SSSGF  MG+ R  E     +  GRP FG  +++  F+   P+SY
Sbjct: 74  FPEIFIFRPSVIGPISSSGFHDMGYSRTCEIPAPGDFSGRPGFGFLKDECCFHRFSPRSY 133


>ref|XP_006387518.1| hypothetical protein POPTR_0907s00020g [Populus trichocarpa]
           gi|550307443|gb|ERP46432.1| hypothetical protein
           POPTR_0907s00020g [Populus trichocarpa]
          Length = 153

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
 Frame = -2

Query: 294 MWRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFLGM 115
           MWR++AK A+ K    S+N  S  R YS+LG S    F EK+KF HS   +        +
Sbjct: 1   MWRNVAKQATLKSQSKSLNFPSFPRTYSFLGASKEPIFFEKLKF-HSLYNTSPR-----L 54

Query: 114 GFCRIGEFSPREESIGRPSFGCARNQTGFNA------CPKSY 7
            F  IGE S  E+ +G+PSF   RN    N       CP+ Y
Sbjct: 55  SFRAIGEISTHEDFMGKPSFIFLRNSDSTNGNRCGGFCPRGY 96


>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 1026

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
 Frame = -2

Query: 327 HTNFHLNK-----------SAVMWRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTF 181
           H N++ NK           S+VMWR++AK A    L+   +     R YS+LG+S  S  
Sbjct: 25  HNNYNNNKPTIRFPSPEKISSVMWRNVAKQAISLHLKKPFS-----RAYSFLGISQDSIL 79

Query: 180 PEKIKFRHSELGSCSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFNACPKSYA 4
            EK+KF   ++      G   +G  RIGE    E+ +GR SFG  +N   +  CP+ YA
Sbjct: 80  REKVKFGCLDM---VPRGIHEVGSGRIGEILNHEDYMGRTSFGVLKNDNFW--CPRGYA 133


>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533046|gb|ESR44229.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 928

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
 Frame = -2

Query: 327 HTNFHLNK-----------SAVMWRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTF 181
           H N++ NK           S+VMWR++AK A    L+   +     R YS+LG+S  S  
Sbjct: 25  HNNYNNNKPTIRFPSPEKISSVMWRNVAKQAISLHLKKPFS-----RAYSFLGISQDSIL 79

Query: 180 PEKIKFRHSELGSCSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFNACPKSYA 4
            EK+KF   ++      G   +G  RIGE    E+ +GR SFG  +N   +  CP+ YA
Sbjct: 80  REKVKFGCLDM---VPRGIHEVGSGRIGEILNHEDYMGRTSFGVLKNDNFW--CPRGYA 133


>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533045|gb|ESR44228.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
 Frame = -2

Query: 327 HTNFHLNK-----------SAVMWRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTF 181
           H N++ NK           S+VMWR++AK A    L+   +     R YS+LG+S  S  
Sbjct: 25  HNNYNNNKPTIRFPSPEKISSVMWRNVAKQAISLHLKKPFS-----RAYSFLGISQDSIL 79

Query: 180 PEKIKFRHSELGSCSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFNACPKSYA 4
            EK+KF   ++      G   +G  RIGE    E+ +GR SFG  +N   +  CP+ YA
Sbjct: 80  REKVKFGCLDM---VPRGIHEVGSGRIGEILNHEDYMGRTSFGVLKNDNFW--CPRGYA 133


>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533044|gb|ESR44227.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 933

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
 Frame = -2

Query: 327 HTNFHLNK-----------SAVMWRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTF 181
           H N++ NK           S+VMWR++AK A    L+   +     R YS+LG+S  S  
Sbjct: 25  HNNYNNNKPTIRFPSPEKISSVMWRNVAKQAISLHLKKPFS-----RAYSFLGISQDSIL 79

Query: 180 PEKIKFRHSELGSCSSSGFLGMGFCRIGEFSPREESIGRPSFGCARNQTGFNACPKSYA 4
            EK+KF   ++      G   +G  RIGE    E+ +GR SFG  +N   +  CP+ YA
Sbjct: 80  REKVKFGCLDM---VPRGIHEVGSGRIGEILNHEDYMGRTSFGVLKNDNFW--CPRGYA 133


>ref|XP_006373532.1| hypothetical protein POPTR_0017s14590g [Populus trichocarpa]
           gi|550320354|gb|ERP51329.1| hypothetical protein
           POPTR_0017s14590g [Populus trichocarpa]
          Length = 987

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
 Frame = -2

Query: 294 MWRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFLGM 115
           MWR++AK A+ K    S+N  S  R YS+LG S    F EK+KF HS L + S      +
Sbjct: 1   MWRNVAKQATLKSQSKSLNFPSFPRTYSFLGASKEPIFFEKLKF-HS-LNNTSPR----L 54

Query: 114 GFCRIGEFSPREESIGRPSFGCARNQTGFNA------CPKSY 7
            F  IGE S  E+ +G+P F   RN    N       CP+ Y
Sbjct: 55  SFRAIGEISTHEDFMGKPRFIFLRNSDSTNGNRCAGFCPRGY 96